# geneInfo

ensembl_gene_id: RA29_00005
symbol: KIC51740.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00010
symbol: KIC51741.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: RA29_00035
symbol: KIC52029.1
gene_biotype: protein_coding
description:
  Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00040
symbol: KIC51746.1
gene_biotype: protein_coding
description:
  Glycolate oxidase subunit GlcD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00045
symbol: KIC52030.1
gene_biotype: protein_coding
description:
  2-hydroxy-acid oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00060
symbol: KIC51749.1
gene_biotype: protein_coding
description:
  Trypsin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1B family.


ensembl_gene_id: RA29_00070
symbol: KIC51751.1
gene_biotype: protein_coding
description:
  Heat-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: RA29_00085
symbol: KIC52031.1
gene_biotype: protein_coding
description:
  Molecular chaperone DnaK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00090
symbol: KIC51754.1
gene_biotype: protein_coding
description:
  Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00115
symbol: KIC51759.1
gene_biotype: protein_coding
description:
  ErfK/YbiS/YcfS/YnhG family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00120
symbol: gabD
gene_biotype: protein_coding
description:
  Succinate-semialdehyde dehydrogenase; Catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00125
symbol: KIC51760.1
gene_biotype: protein_coding
description:
  Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00130
symbol: KIC51761.1
gene_biotype: protein_coding
description:
  Creatininase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00155
symbol: KIC51766.1
gene_biotype: protein_coding
description:
  ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00190
symbol: KIC51773.1
gene_biotype: protein_coding
description:
  RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00195
symbol: KIC51774.1
gene_biotype: protein_coding
description:
  Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00210
symbol: KIC51776.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.


ensembl_gene_id: RA29_00215
symbol: KIC51777.1
gene_biotype: protein_coding
description:
  GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00220
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: RA29_00225
symbol: sseA
gene_biotype: protein_coding
description:
  3-mercaptopyruvate sulfurtransferase; Catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00230
symbol: KIC51780.1
gene_biotype: protein_coding
description:
  Aromatic amino acid aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00245
symbol: KIC51781.1
gene_biotype: protein_coding
description:
  Ammonium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00250
symbol: KIC52033.1
gene_biotype: protein_coding
description:
  Nitrogen regulatory protein P-II 1; Indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00260
symbol: KIC51783.1
gene_biotype: protein_coding
description:
  ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00270
symbol: KIC51784.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00275
symbol: KIC51785.1
gene_biotype: protein_coding
description:
  RTX toxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00280
symbol: KIC51786.1
gene_biotype: protein_coding
description:
  Endoribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00285
symbol: KIC51787.1
gene_biotype: protein_coding
description:
  Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00295
symbol: KIC51789.1
gene_biotype: protein_coding
description:
  Pterin-4-alpha-carbinolamine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00300
symbol: KIC51790.1
gene_biotype: protein_coding
description:
  Mechanosensitive ion channel protein MscS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00305
symbol: KIC51791.1
gene_biotype: protein_coding
description:
  Thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.


ensembl_gene_id: RA29_00310
symbol: KIC51792.1
gene_biotype: protein_coding
description:
  Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00315
symbol: KIC51793.1
gene_biotype: protein_coding
description:
  DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00320
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: RA29_00325
symbol: sfsA
gene_biotype: protein_coding
description:
  Sugar fermentation stimulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SfsA family.


ensembl_gene_id: RA29_00330
symbol: KIC52034.1
gene_biotype: protein_coding
description:
  Molybdopterin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00335
symbol: KIC51796.1
gene_biotype: protein_coding
description:
  Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00340
symbol: KIC51797.1
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: RA29_00355
symbol: KIC51799.1
gene_biotype: protein_coding
description:
  Endoribonuclease L-PSP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00360
symbol: KIC51800.1
gene_biotype: protein_coding
description:
  LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: RA29_00370
symbol: KIC51802.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: RA29_00375
symbol: KIC51803.1
gene_biotype: protein_coding
description:
  Rod shape-determining protein RodA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00385
symbol: fadH
gene_biotype: protein_coding
description:
  2,4-dienoyl-CoA reductase; Catalyzes the formation of trans-2- enoyl-CoA from 2,4-dienoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00415
symbol: KIC51810.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: RA29_00420
symbol: KIC51811.1
gene_biotype: protein_coding
description:
  Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00440
symbol: rppH
gene_biotype: protein_coding
description:
  RNA pyrophosphohydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.


ensembl_gene_id: RA29_00450
symbol: KIC51815.1
gene_biotype: protein_coding
description:
  GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00455
symbol: KIC51816.1
gene_biotype: protein_coding
description:
  Adenosine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00460
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: RA29_00475
symbol: KIC51818.1
gene_biotype: protein_coding
description:
  Ribulose-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00480
symbol: KIC51819.1
gene_biotype: protein_coding
description:
  6-O-methylguanine DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00490
symbol: KIC51821.1
gene_biotype: protein_coding
description:
  NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00495
symbol: KIC51822.1
gene_biotype: protein_coding
description:
  Virulence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00500
symbol: KIC51823.1
gene_biotype: protein_coding
description:
  Acyl dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00505
symbol: KIC51824.1
gene_biotype: protein_coding
description:
  Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00510
symbol: KIC52036.1
gene_biotype: protein_coding
description:
  FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00515
symbol: KIC51825.1
gene_biotype: protein_coding
description:
  RhaT family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00520
symbol: KIC51826.1
gene_biotype: protein_coding
description:
  Tail length tape measure protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00525
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: RA29_00535
symbol: KIC51828.1
gene_biotype: protein_coding
description:
  Dibenzothiophene desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00540
symbol: KIC51829.1
gene_biotype: protein_coding
description:
  (Fe-S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00550
symbol: KIC51831.1
gene_biotype: protein_coding
description:
  Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: RA29_00560
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: RA29_00565
symbol: KIC51834.1
gene_biotype: protein_coding
description:
  Catalyzes the formation of acetyl phosphate from acetyl-CoA and phosphate; can also act with other short-chain acyl-CoAs; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00570
symbol: KIC51835.1
gene_biotype: protein_coding
description:
  Sulfoacetaldehyde acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.


ensembl_gene_id: RA29_00575
symbol: KIC51836.1
gene_biotype: protein_coding
description:
  GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00580
symbol: KIC51837.1
gene_biotype: protein_coding
description:
  Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00585
symbol: KIC51838.1
gene_biotype: protein_coding
description:
  Taurine--pyruvate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: RA29_00590
symbol: KIC51839.1
gene_biotype: protein_coding
description:
  Taurine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00595
symbol: tauB
gene_biotype: protein_coding
description:
  Taurine ABC transporter ATP-binding protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family.


ensembl_gene_id: RA29_00600
symbol: KIC51841.1
gene_biotype: protein_coding
description:
  Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00615
symbol: KIC51843.1
gene_biotype: protein_coding
description:
  Primosomal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00620
symbol: KIC51844.1
gene_biotype: protein_coding
description:
  Zinc metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00635
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: RA29_00645
symbol: KIC51849.1
gene_biotype: protein_coding
description:
  AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00665
symbol: KIC51853.1
gene_biotype: protein_coding
description:
  Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00670
symbol: KIC51854.1
gene_biotype: protein_coding
description:
  malyl-CoA lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family.


ensembl_gene_id: RA29_00675
symbol: KIC51855.1
gene_biotype: protein_coding
description:
  EBNA-1 nuclear protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00680
symbol: KIC51856.1
gene_biotype: protein_coding
description:
  Mandelate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00685
symbol: KIC51857.1
gene_biotype: protein_coding
description:
  Catalyzes the transamination of D-amino acids and their alpha-keto acids; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00710
symbol: KIC52037.1
gene_biotype: protein_coding
description:
  N-formylglutamate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00715
symbol: KIC51862.1
gene_biotype: protein_coding
description:
  Pyruvate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pyruvate kinase family.


ensembl_gene_id: RA29_00725
symbol: rpmI
gene_biotype: protein_coding
description:
  50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL35 family.


ensembl_gene_id: RA29_00730
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: RA29_00755
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: RA29_00765
symbol: KIC52040.1
gene_biotype: protein_coding
description:
  Polyhydroxybutyrate depolymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00770
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: RA29_00780
symbol: KIC52041.1
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis protein UbiE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00790
symbol: KIC51871.1
gene_biotype: protein_coding
description:
  Glucose-methanol-choline oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GMC oxidoreductase family.


ensembl_gene_id: RA29_00795
symbol: KIC51872.1
gene_biotype: protein_coding
description:
  Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GST superfamily.


ensembl_gene_id: RA29_00800
symbol: mscL
gene_biotype: protein_coding
description:
  Mechanosensitive ion channel protein MscL; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: RA29_00805
symbol: KIC51873.1
gene_biotype: protein_coding
description:
  Alanine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AlaDH/PNT family.


ensembl_gene_id: RA29_00815
symbol: KIC51875.1
gene_biotype: protein_coding
description:
  Transcriptional initiation protein Tat; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00830
symbol: rpsU
gene_biotype: protein_coding
description:
  30S ribosomal protein S21; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS21 family.


ensembl_gene_id: RA29_00840
symbol: KIC51879.1
gene_biotype: protein_coding
description:
  COQ9 family ubiquinone biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00850
symbol: KIC51881.1
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00865
symbol: KIC52044.1
gene_biotype: protein_coding
description:
  Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RNase T2 family.


ensembl_gene_id: RA29_00875
symbol: KIC51884.1
gene_biotype: protein_coding
description:
  Cytoplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00885
symbol: KIC51885.1
gene_biotype: protein_coding
description:
  Glycosyl transferase family 20; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00895
symbol: recR
gene_biotype: protein_coding
description:
  Recombinase RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: RA29_00905
symbol: KIC51888.1
gene_biotype: protein_coding
description:
  30S ribosomal protein S21; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: RA29_00920
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: RA29_00925
symbol: KIC51891.1
gene_biotype: protein_coding
description:
  TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00935
symbol: KIC51892.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5'-nucleotidase family.


ensembl_gene_id: RA29_00940
symbol: KIC51893.1
gene_biotype: protein_coding
description:
  NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family.


ensembl_gene_id: RA29_00945
symbol: KIC51894.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit gamma/tau; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00950
symbol: KIC51895.1
gene_biotype: protein_coding
description:
  Prephenate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00960
symbol: KIC51897.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00965
symbol: KIC51898.1
gene_biotype: protein_coding
description:
  Microcin ABC transporter permease; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00970
symbol: KIC52049.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00975
symbol: KIC51899.1
gene_biotype: protein_coding
description:
  Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: RA29_00980
symbol: KIC52050.1
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis methyltransferase UbiE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_00990
symbol: KIC51901.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MtfA family.


ensembl_gene_id: RA29_00995
symbol: KIC51902.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family.


ensembl_gene_id: RA29_01000
symbol: KIC51903.1
gene_biotype: protein_coding
description:
  HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01005
symbol: clpS
gene_biotype: protein_coding
description:
  Clp protease ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: RA29_01010
symbol: KIC51905.1
gene_biotype: protein_coding
description:
  MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methyltransferase superfamily.


ensembl_gene_id: RA29_01020
symbol: KIC51907.1
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01025
symbol: KIC51908.1
gene_biotype: protein_coding
description:
  acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01030
symbol: hemC
gene_biotype: protein_coding
description:
  Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: RA29_01035
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: RA29_01050
symbol: KIC51911.1
gene_biotype: protein_coding
description:
  Trimethylamine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01055
symbol: KIC51912.1
gene_biotype: protein_coding
description:
  FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.


ensembl_gene_id: RA29_01060
symbol: KIC51913.1
gene_biotype: protein_coding
description:
  C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01065
symbol: KIC51914.1
gene_biotype: protein_coding
description:
  C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01075
symbol: KIC51915.1
gene_biotype: protein_coding
description:
  4-hydroxybenzoate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01085
symbol: KIC51917.1
gene_biotype: protein_coding
description:
  benzoyl-CoA-dihydrodiol lyase; Cleaves the ring of 2,3-dihydro-2,3-dihydroxybenzoyl-CoA forming 6-hydroxy-3-hexenoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01090
symbol: KIC52053.1
gene_biotype: protein_coding
description:
  benzoyl-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01105
symbol: aroK
gene_biotype: protein_coding
description:
  Transcriptional regulator; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: RA29_01115
symbol: KIC51922.1
gene_biotype: protein_coding
description:
  Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01135
symbol: KIC51925.1
gene_biotype: protein_coding
description:
  Fumarylacetoacetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01140
symbol: KIC51926.1
gene_biotype: protein_coding
description:
  An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01145
symbol: KIC51927.1
gene_biotype: protein_coding
description:
  MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01155
symbol: edd
gene_biotype: protein_coding
description:
  Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.


ensembl_gene_id: RA29_01160
symbol: KIC51930.1
gene_biotype: protein_coding
description:
  Keto-deoxy-phosphogluconate aldolase; Catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01165
symbol: KIC51931.1
gene_biotype: protein_coding
description:
  Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01190
symbol: KIC51935.1
gene_biotype: protein_coding
description:
  50S ribosomal protein L31; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL31 family.


ensembl_gene_id: RA29_01195
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: RA29_01200
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: RA29_01205
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA-processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: RA29_01210
symbol: KIC51939.1
gene_biotype: protein_coding
description:
  cob(II)yrinic acid a,c-diamide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01215
symbol: rpsP
gene_biotype: protein_coding
description:
  30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family.


ensembl_gene_id: RA29_01220
symbol: KIC51941.1
gene_biotype: protein_coding
description:
  Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01225
symbol: KIC51942.1
gene_biotype: protein_coding
description:
  GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01250
symbol: KIC51947.1
gene_biotype: protein_coding
description:
  NIPSNAP family containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01255
symbol: ffh
gene_biotype: protein_coding
description:
  RNA-binding protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components; Belongs to t [...]


ensembl_gene_id: RA29_01260
symbol: KIC51949.1
gene_biotype: protein_coding
description:
  Aminodeoxychorismate synthase; Catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01265
symbol: KIC51950.1
gene_biotype: protein_coding
description:
  Stress responsive protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01275
symbol: KIC51952.1
gene_biotype: protein_coding
description:
  Damage-inducible protein DinB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01285
symbol: azoR
gene_biotype: protein_coding
description:
  FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.


ensembl_gene_id: RA29_01300
symbol: KIC51956.1
gene_biotype: protein_coding
description:
  ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01315
symbol: KIC51959.1
gene_biotype: protein_coding
description:
  ATP synthase F0 subunit I; A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex.


ensembl_gene_id: RA29_01320
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0F1 subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: RA29_01325
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: RA29_01330
symbol: atpF
gene_biotype: protein_coding
description:
  ATP F0F1 synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: RA29_01355
symbol: smc
gene_biotype: protein_coding
description:
  Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: RA29_01365
symbol: KIC51967.1
gene_biotype: protein_coding
description:
  Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01370
symbol: cobD
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: RA29_01375
symbol: KIC52056.1
gene_biotype: protein_coding
description:
  Alpha-ribazole phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01380
symbol: KIC51969.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01385
symbol: KIC52057.1
gene_biotype: protein_coding
description:
  Glutathionyl-hydroquinone reductase YqjG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01400
symbol: znuC
gene_biotype: protein_coding
description:
  Zinc ABC transporter ATPase; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.


ensembl_gene_id: RA29_01405
symbol: KIC52058.1
gene_biotype: protein_coding
description:
  Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family.


ensembl_gene_id: RA29_01415
symbol: KIC51974.1
gene_biotype: protein_coding
description:
  4-hydroxytetrahydrobiopterin dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01435
symbol: KIC51976.1
gene_biotype: protein_coding
description:
  Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01445
symbol: KIC51978.1
gene_biotype: protein_coding
description:
  Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01450
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: RA29_01455
symbol: def-2
gene_biotype: protein_coding
description:
  N-formylmethionyl-tRNA deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: RA29_01460
symbol: def-3
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. Belongs to the polypeptide deformylase family.


ensembl_gene_id: RA29_01465
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: RA29_01490
symbol: KIC51986.1
gene_biotype: protein_coding
description:
  SAM-dependent methlyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01505
symbol: KIC51989.1
gene_biotype: protein_coding
description:
  LysE family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01510
symbol: KIC51990.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the alkaline phosphatase family.


ensembl_gene_id: RA29_01515
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: RA29_01530
symbol: KIC52061.1
gene_biotype: protein_coding
description:
  2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01535
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: RA29_01540
symbol: KIC51994.1
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: RA29_01545
symbol: KIC51995.1
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01550
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: RA29_01565
symbol: acpS
gene_biotype: protein_coding
description:
  4'-phosphopantetheinyl transferase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: RA29_01570
symbol: KIC51999.1
gene_biotype: protein_coding
description:
  Signal peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.


ensembl_gene_id: RA29_01575
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: RA29_01580
symbol: era
gene_biotype: protein_coding
description:
  GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: RA29_01585
symbol: KIC52063.1
gene_biotype: protein_coding
description:
  GTP-binding protein Era; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01600
symbol: KIC52004.1
gene_biotype: protein_coding
description:
  Amino acid transporter LysE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01610
symbol: KIC52006.1
gene_biotype: protein_coding
description:
  XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01615
symbol: KIC52007.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: RA29_01630
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase [ATP]; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.


ensembl_gene_id: RA29_01635
symbol: KIC52010.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01640
symbol: KIC52011.1
gene_biotype: protein_coding
description:
  Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01655
symbol: KIC52014.1
gene_biotype: protein_coding
description:
  PTS fructose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01660
symbol: KIC52015.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01665
symbol: KIC52016.1
gene_biotype: protein_coding
description:
  Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01670
symbol: KIC52017.1
gene_biotype: protein_coding
description:
  3-hydroxybutyryl-CoA dehydrogenase; Converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01680
symbol: KIC52019.1
gene_biotype: protein_coding
description:
  Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01695
symbol: KIC52022.1
gene_biotype: protein_coding
description:
  cob(I)yrinic acid a c-diamide adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Cob(I)alamin adenosyltransferase family.


ensembl_gene_id: RA29_01705
symbol: KIC52024.1
gene_biotype: protein_coding
description:
  Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: RA29_01715
symbol: parC
gene_biotype: protein_coding
description:
  DNA topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.


ensembl_gene_id: RA29_01725
symbol: KIC52027.1
gene_biotype: protein_coding
description:
  Peptidase M48 Ste24p; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01730
symbol: KIC52066.1
gene_biotype: protein_coding
description:
  Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.


ensembl_gene_id: RA29_01775
symbol: KIC51554.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01815
symbol: KIC50701.1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01820
symbol: KIC51392.1
gene_biotype: protein_coding
description:
  Alkane 1-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01830
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: RA29_01835
symbol: purD
gene_biotype: protein_coding
description:
  Phosphoribosylamine--glycine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GARS family.


ensembl_gene_id: RA29_01850
symbol: KIC50705.1
gene_biotype: protein_coding
description:
  2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01860
symbol: KIC50706.1
gene_biotype: protein_coding
description:
  Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01865
symbol: KIC50707.1
gene_biotype: protein_coding
description:
  Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family.


ensembl_gene_id: RA29_01885
symbol: KIC50711.1
gene_biotype: protein_coding
description:
  NADPH-glutathione reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01890
symbol: rpiA
gene_biotype: protein_coding
description:
  Ribose 5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.


ensembl_gene_id: RA29_01900
symbol: KIC51395.1
gene_biotype: protein_coding
description:
  Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01905
symbol: KIC50714.1
gene_biotype: protein_coding
description:
  Serine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron-sulfur dependent L-serine dehydratase family.


ensembl_gene_id: RA29_01935
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: RA29_01945
symbol: KIC50721.1
gene_biotype: protein_coding
description:
  Nitrile hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_01950
symbol: KIC50722.1
gene_biotype: protein_coding
description:
  Nitrile hydratase; NHase catalyzes the hydration of various nitrile compounds to the corresponding amides; Belongs to the nitrile hydratase subunit beta family.


ensembl_gene_id: RA29_01960
symbol: KIC50723.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: RA29_01965
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: RA29_01985
symbol: rlmJ
gene_biotype: protein_coding
description:
  Protein involved in catabolism of external DNA; Specifically methylates the adenine in position 2030 of 23S rRNA.


ensembl_gene_id: RA29_02005
symbol: KIC50730.1
gene_biotype: protein_coding
description:
  ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02010
symbol: KIC50731.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02015
symbol: KIC50732.1
gene_biotype: protein_coding
description:
  ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02020
symbol: KIC50733.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02025
symbol: KIC51397.1
gene_biotype: protein_coding
description:
  Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamine synthetase family.


ensembl_gene_id: RA29_02030
symbol: KIC50734.1
gene_biotype: protein_coding
description:
  Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02045
symbol: KIC50737.1
gene_biotype: protein_coding
description:
  Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: RA29_02050
symbol: KIC50738.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02055
symbol: KIC51398.1
gene_biotype: protein_coding
description:
  Polyhydroxyalkanoate synthesis repressor PhaR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02075
symbol: KIC51399.1
gene_biotype: protein_coding
description:
  Phasin, PhaP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02080
symbol: KIC50740.1
gene_biotype: protein_coding
description:
  poly(R)-hydroxyalkanoic acid synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02085
symbol: KIC50741.1
gene_biotype: protein_coding
description:
  Polyhydroxyalkanoate depolymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02105
symbol: KIC50745.1
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02110
symbol: KIC50746.1
gene_biotype: protein_coding
description:
  Peptidoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02125
symbol: KIC51401.1
gene_biotype: protein_coding
description:
  Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02160
symbol: thrS
gene_biotype: protein_coding
description:
  threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: RA29_02165
symbol: KIC51403.1
gene_biotype: protein_coding
description:
  Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02185
symbol: KIC50756.1
gene_biotype: protein_coding
description:
  Arsenate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ArsC family.


ensembl_gene_id: RA29_02190
symbol: KIC50757.1
gene_biotype: protein_coding
description:
  Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02210
symbol: thyX
gene_biotype: protein_coding
description:
  FAD-dependent thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: RA29_02230
symbol: KIC50764.1
gene_biotype: protein_coding
description:
  Von Willebrand factor A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02255
symbol: KIC50768.1
gene_biotype: protein_coding
description:
  Aspartate aminotransferase; Catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02265
symbol: KIC50770.1
gene_biotype: protein_coding
description:
  Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02270
symbol: KIC50771.1
gene_biotype: protein_coding
description:
  Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NiCoT transporter (TC 2.A.52) family.


ensembl_gene_id: RA29_02280
symbol: KIC50773.1
gene_biotype: protein_coding
description:
  Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02295
symbol: parE
gene_biotype: protein_coding
description:
  DNA topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily.


ensembl_gene_id: RA29_02315
symbol: KIC50778.1
gene_biotype: protein_coding
description:
  Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LDH2/MDH2 oxidoreductase family.


ensembl_gene_id: RA29_02320
symbol: lolD
gene_biotype: protein_coding
description:
  ABC transporter; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.


ensembl_gene_id: RA29_02330
symbol: KIC50781.1
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02340
symbol: proS
gene_biotype: protein_coding
description:
  proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro); Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 2 subfamily.


ensembl_gene_id: RA29_02350
symbol: KIC50784.1
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DnaA family.


ensembl_gene_id: RA29_02355
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: RA29_02360
symbol: KIC50786.1
gene_biotype: protein_coding
description:
  Exopolyphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02370
symbol: KIC50788.1
gene_biotype: protein_coding
description:
  Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02375
symbol: KIC50789.1
gene_biotype: protein_coding
description:
  Dimethylmenaquinone methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02385
symbol: KIC50791.1
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02390
symbol: KIC50792.1
gene_biotype: protein_coding
description:
  methylmalonyl-CoA mutase; MDM; functions in conversion of succinate to propionate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02410
symbol: KIC50795.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02440
symbol: KIC50800.1
gene_biotype: protein_coding
description:
  methylmalonyl-CoA carboxyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02445
symbol: KIC51408.1
gene_biotype: protein_coding
description:
  Multidrug MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02450
symbol: KIC50801.1
gene_biotype: protein_coding
description:
  Cro/Cl family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02455
symbol: KIC50802.1
gene_biotype: protein_coding
description:
  Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02460
symbol: KIC50803.1
gene_biotype: protein_coding
description:
  Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.


ensembl_gene_id: RA29_02465
symbol: betB
gene_biotype: protein_coding
description:
  Betaine-aldehyde dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid.


ensembl_gene_id: RA29_02475
symbol: KIC50805.1
gene_biotype: protein_coding
description:
  Choline-sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02495
symbol: KIC51411.1
gene_biotype: protein_coding
description:
  Hemolysin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02520
symbol: KIC50810.1
gene_biotype: protein_coding
description:
  Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02525
symbol: KIC50811.1
gene_biotype: protein_coding
description:
  Bile acid:sodium symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02530
symbol: KIC50812.1
gene_biotype: protein_coding
description:
  FAD-binding dehydrogenase; Proposed role in polysaccahride synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02540
symbol: KIC50813.1
gene_biotype: protein_coding
description:
  dATP pyrophosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02550
symbol: KIC51412.1
gene_biotype: protein_coding
description:
  Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02555
symbol: KIC50815.1
gene_biotype: protein_coding
description:
  5-formyltetrahydrofolate cyclo-ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.


ensembl_gene_id: RA29_02565
symbol: KIC50817.1
gene_biotype: protein_coding
description:
  Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.


ensembl_gene_id: RA29_02570
symbol: KIC51413.1
gene_biotype: protein_coding
description:
  Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02575
symbol: KIC50818.1
gene_biotype: protein_coding
description:
  Hydroxydechloroatrazine ethylaminohydrolase; Catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02580
symbol: KIC50819.1
gene_biotype: protein_coding
description:
  Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02600
symbol: KIC50823.1
gene_biotype: protein_coding
description:
  Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BI1 family.


ensembl_gene_id: RA29_02615
symbol: rpmG
gene_biotype: protein_coding
description:
  50S ribosomal protein L33; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL33 family.


ensembl_gene_id: RA29_02620
symbol: KIC51414.1
gene_biotype: protein_coding
description:
  N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02630
symbol: gatA
gene_biotype: protein_coding
description:
  glutamyl-tRNA amidotransferase; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: RA29_02635
symbol: gatC
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: RA29_02645
symbol: KIC50830.1
gene_biotype: protein_coding
description:
  Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0173 family.


ensembl_gene_id: RA29_02650
symbol: tadA
gene_biotype: protein_coding
description:
  CMP deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: RA29_02655
symbol: KIC50832.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: RA29_02670
symbol: KIC51416.1
gene_biotype: protein_coding
description:
  Tellurium resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TelA family.


ensembl_gene_id: RA29_02680
symbol: KIC50836.1
gene_biotype: protein_coding
description:
  Antifreeze protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02700
symbol: KIC50839.1
gene_biotype: protein_coding
description:
  Primosomal protein N' (replication factor Y) - superfamily II helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02705
symbol: KIC50840.1
gene_biotype: protein_coding
description:
  Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02710
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: RA29_02715
symbol: KIC50842.1
gene_biotype: protein_coding
description:
  Adenylylsulfate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02720
symbol: KIC50843.1
gene_biotype: protein_coding
description:
  Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02735
symbol: KIC50845.1
gene_biotype: protein_coding
description:
  RTX family exoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02740
symbol: KIC50846.1
gene_biotype: protein_coding
description:
  MOFRL family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02745
symbol: KIC50847.1
gene_biotype: protein_coding
description:
  Peptidase S15; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02770
symbol: KIC50851.1
gene_biotype: protein_coding
description:
  ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: RA29_02775
symbol: KIC50852.1
gene_biotype: protein_coding
description:
  Nucleotide pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02785
symbol: KIC50854.1
gene_biotype: protein_coding
description:
  AMP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02805
symbol: KIC51418.1
gene_biotype: protein_coding
description:
  AP endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02810
symbol: KIC51419.1
gene_biotype: protein_coding
description:
  LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02815
symbol: KIC50857.1
gene_biotype: protein_coding
description:
  Dihydroxyacetone kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02820
symbol: KIC50858.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: RA29_02835
symbol: KIC51420.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02850
symbol: KIC50863.1
gene_biotype: protein_coding
description:
  Transporter (formate/nitrite transporter family protein); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02865
symbol: KIC51421.1
gene_biotype: protein_coding
description:
  Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02875
symbol: KIC50866.1
gene_biotype: protein_coding
description:
  Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: RA29_02880
symbol: KIC50867.1
gene_biotype: protein_coding
description:
  Two-component response regulator; In Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02885
symbol: KIC50868.1
gene_biotype: protein_coding
description:
  Ferritin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family.


ensembl_gene_id: RA29_02910
symbol: KIC50872.1
gene_biotype: protein_coding
description:
  Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02930
symbol: KIC50875.1
gene_biotype: protein_coding
description:
  Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.


ensembl_gene_id: RA29_02940
symbol: ychF
gene_biotype: protein_coding
description:
  GTP-binding protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: RA29_02950
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: RA29_02960
symbol: cmk
gene_biotype: protein_coding
description:
  Cytidylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02965
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: RA29_02970
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N7)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: RA29_02980
symbol: KIC51425.1
gene_biotype: protein_coding
description:
  Twin-arginine translocation pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02985
symbol: lldD
gene_biotype: protein_coding
description:
  Lactate dehydrogenase; Flavin mononucleotide-dependent dehydrogenase; functions in aerobic respiration and also has a role in anaerobic nitrate respiration; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_02995
symbol: rplY
gene_biotype: protein_coding
description:
  50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: RA29_03000
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: RA29_03010
symbol: KIC51426.1
gene_biotype: protein_coding
description:
  6-aminohexanoate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03020
symbol: KIC50888.1
gene_biotype: protein_coding
description:
  LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03035
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: RA29_03045
symbol: trpF
gene_biotype: protein_coding
description:
  N-(5'-phosphoribosyl)anthranilate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TrpF family.


ensembl_gene_id: RA29_03050
symbol: KIC50893.1
gene_biotype: protein_coding
description:
  Phosphoribosylanthranilate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03055
symbol: ihfB
gene_biotype: protein_coding
description:
  Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: RA29_03060
symbol: KIC50895.1
gene_biotype: protein_coding
description:
  30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.


ensembl_gene_id: RA29_03085
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: RA29_03090
symbol: lnt
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: RA29_03095
symbol: KIC50899.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03100
symbol: ybeY
gene_biotype: protein_coding
description:
  rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: RA29_03115
symbol: KIC51430.1
gene_biotype: protein_coding
description:
  Cell envelope biogenesis protein OmpA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03120
symbol: miaB
gene_biotype: protein_coding
description:
  (dimethylallyl)adenosine tRNA methylthiotransferase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: RA29_03140
symbol: KIC50906.1
gene_biotype: protein_coding
description:
  2OG-Fe(II) oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03145
symbol: KIC50907.1
gene_biotype: protein_coding
description:
  3-hydroxydecanoyl-ACP dehydratase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length.


ensembl_gene_id: RA29_03150
symbol: KIC50908.1
gene_biotype: protein_coding
description:
  FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: RA29_03155
symbol: KIC50909.1
gene_biotype: protein_coding
description:
  enoyl-ACP reductase; Catalyzes a key regulatory step in fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03165
symbol: KIC50911.1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03170
symbol: KIC50912.1
gene_biotype: protein_coding
description:
  Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03175
symbol: KIC50913.1
gene_biotype: protein_coding
description:
  Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03180
symbol: KIC50914.1
gene_biotype: protein_coding
description:
  Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03185
symbol: KIC50915.1
gene_biotype: protein_coding
description:
  Alpha-1,4 polygalactosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03190
symbol: KIC50916.1
gene_biotype: protein_coding
description:
  3-oxoadipate enol-lactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03195
symbol: KIC50917.1
gene_biotype: protein_coding
description:
  3-carboxy-cis,cis-muconate cycloisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03200
symbol: KIC50918.1
gene_biotype: protein_coding
description:
  MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03205
symbol: KIC51431.1
gene_biotype: protein_coding
description:
  Zinc-binding dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03210
symbol: KIC50919.1
gene_biotype: protein_coding
description:
  Isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mandelate racemase/muconate lactonizing enzyme family.


ensembl_gene_id: RA29_03220
symbol: KIC50920.1
gene_biotype: protein_coding
description:
  Acyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03225
symbol: KIC50921.1
gene_biotype: protein_coding
description:
  Enterotoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03230
symbol: KIC51433.1
gene_biotype: protein_coding
description:
  Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03250
symbol: KIC51435.1
gene_biotype: protein_coding
description:
  Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03260
symbol: KIC50925.1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03275
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: RA29_03325
symbol: KIC50937.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SOS response-associated peptidase family.


ensembl_gene_id: RA29_03330
symbol: KIC50938.1
gene_biotype: protein_coding
description:
  5'-nucleotidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5'-nucleotidase family.


ensembl_gene_id: RA29_03345
symbol: KIC50941.1
gene_biotype: protein_coding
description:
  Diguanylate cyclase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: RA29_03350
symbol: KIC51436.1
gene_biotype: protein_coding
description:
  Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03355
symbol: KIC50942.1
gene_biotype: protein_coding
description:
  Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03365
symbol: KIC50944.1
gene_biotype: protein_coding
description:
  MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03375
symbol: KIC50946.1
gene_biotype: protein_coding
description:
  Universal stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03415
symbol: KIC50953.1
gene_biotype: protein_coding
description:
  acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: RA29_03420
symbol: KIC50954.1
gene_biotype: protein_coding
description:
  3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03430
symbol: KIC50956.1
gene_biotype: protein_coding
description:
  Dimethlysulfonioproprionate lyase DddL; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03435
symbol: KIC50957.1
gene_biotype: protein_coding
description:
  Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03445
symbol: KIC50958.1
gene_biotype: protein_coding
description:
  Type II secretory pathway, pullulanase PulA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03455
symbol: KIC50959.1
gene_biotype: protein_coding
description:
  acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03460
symbol: KIC51439.1
gene_biotype: protein_coding
description:
  Guanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03465
symbol: prpE
gene_biotype: protein_coding
description:
  Catalyzes the formation of propionyl-CoA using propionate as a substrate; PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A; not expressed in Escherichia coli when grown on propionate/minimal media; ATP-dependent; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03475
symbol: KIC50962.1
gene_biotype: protein_coding
description:
  Malate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03480
symbol: KIC50963.1
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: RA29_03485
symbol: deoA
gene_biotype: protein_coding
description:
  Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family.


ensembl_gene_id: RA29_03490
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: RA29_03495
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: RA29_03510
symbol: nadK
gene_biotype: protein_coding
description:
  Inorganic polyphosphate kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: RA29_03515
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: RA29_03520
symbol: KIC51441.1
gene_biotype: protein_coding
description:
  Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03545
symbol: carB
gene_biotype: protein_coding
description:
  Carbamoyl phosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CarB family.


ensembl_gene_id: RA29_03595
symbol: KIC50980.1
gene_biotype: protein_coding
description:
  3-keto-5-aminohexanoate cleavage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03600
symbol: KIC50981.1
gene_biotype: protein_coding
description:
  Cytochrome oxidase maturation protein Cbb3; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03610
symbol: KIC50983.1
gene_biotype: protein_coding
description:
  FixH protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03615
symbol: KIC50984.1
gene_biotype: protein_coding
description:
  Protein rdxA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03630
symbol: KIC50987.1
gene_biotype: protein_coding
description:
  Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03635
symbol: KIC50988.1
gene_biotype: protein_coding
description:
  Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: RA29_03650
symbol: KIC50991.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: RA29_03655
symbol: KIC50992.1
gene_biotype: protein_coding
description:
  Inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03660
symbol: KIC50993.1
gene_biotype: protein_coding
description:
  Fructose-bisphosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03665
symbol: KIC50994.1
gene_biotype: protein_coding
description:
  5-deoxyglucuronate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03670
symbol: KIC50995.1
gene_biotype: protein_coding
description:
  Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03675
symbol: KIC50996.1
gene_biotype: protein_coding
description:
  phytanoyl-CoA dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03680
symbol: KIC50997.1
gene_biotype: protein_coding
description:
  3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.


ensembl_gene_id: RA29_03690
symbol: KIC50999.1
gene_biotype: protein_coding
description:
  Myo-inositol catabolism protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03710
symbol: KIC51003.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03715
symbol: KIC51004.1
gene_biotype: protein_coding
description:
  ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: RA29_03720
symbol: KIC51005.1
gene_biotype: protein_coding
description:
  Rhizopine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03725
symbol: KIC51006.1
gene_biotype: protein_coding
description:
  3-methyladenine DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03735
symbol: KIC51007.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03745
symbol: KIC51009.1
gene_biotype: protein_coding
description:
  Mannitol ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03750
symbol: KIC51010.1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: RA29_03755
symbol: KIC51011.1
gene_biotype: protein_coding
description:
  Converts D-sorbitol to L-sorbose; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03760
symbol: KIC51443.1
gene_biotype: protein_coding
description:
  Mannitol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03770
symbol: KIC51012.1
gene_biotype: protein_coding
description:
  Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03775
symbol: KIC51445.1
gene_biotype: protein_coding
description:
  Beta-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03805
symbol: KIC51017.1
gene_biotype: protein_coding
description:
  Biotin transporter BioY; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03855
symbol: KIC51026.1
gene_biotype: protein_coding
description:
  Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03860
symbol: KIC51027.1
gene_biotype: protein_coding
description:
  Urea ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03870
symbol: KIC51029.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: RA29_03880
symbol: KIC51031.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_03920
symbol: KIC51448.1
gene_biotype: protein_coding
description:
  DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the N(4)/N(6)-methyltransferase family.


ensembl_gene_id: RA29_03930
symbol: KIC51037.1
gene_biotype: protein_coding
description:
  Trans-acting regulatory protein hvrA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04075
symbol: KIC51063.1
gene_biotype: protein_coding
description:
  Sodium:solute symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04100
symbol: KIC51067.1
gene_biotype: protein_coding
description:
  ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: RA29_04120
symbol: KIC51451.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: RA29_04130
symbol: aat
gene_biotype: protein_coding
description:
  leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: RA29_04145
symbol: KIC51073.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase; Provides the input to the respiratory chain from the NAD-linked dehydrogenases of the citric acid cycle. The complex couples the oxidation of NADH and the reduction of ubiquinone, to the generation of a proton gradient which is then used for ATP synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04155
symbol: clpX
gene_biotype: protein_coding
description:
  Clp protease ATP-binding protein; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: RA29_04160
symbol: clpP
gene_biotype: protein_coding
description:
  Clp protease; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: RA29_04165
symbol: KIC51455.1
gene_biotype: protein_coding
description:
  DNA photolyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04175
symbol: KIC51076.1
gene_biotype: protein_coding
description:
  Sporulation domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04180
symbol: KIC51077.1
gene_biotype: protein_coding
description:
  D-Ala-D-Ala carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family.


ensembl_gene_id: RA29_04185
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: RA29_04190
symbol: KIC51079.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04205
symbol: KIC51082.1
gene_biotype: protein_coding
description:
  Malonate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04210
symbol: KIC51456.1
gene_biotype: protein_coding
description:
  Ribonuclease BN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04225
symbol: nnrD
gene_biotype: protein_coding
description:
  Hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epi [...]


ensembl_gene_id: RA29_04235
symbol: glnA
gene_biotype: protein_coding
description:
  Forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues; addition of adenylyl groups results in inactivation of the enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04245
symbol: KIC51457.1
gene_biotype: protein_coding
description:
  Murein transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04260
symbol: KIC51459.1
gene_biotype: protein_coding
description:
  Peptidase M24; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04280
symbol: KIC51091.1
gene_biotype: protein_coding
description:
  Osmotically inducible protein C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04285
symbol: KIC51092.1
gene_biotype: protein_coding
description:
  acetyl-COA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04290
symbol: KIC51460.1
gene_biotype: protein_coding
description:
  Trigger factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04295
symbol: KIC51093.1
gene_biotype: protein_coding
description:
  Adenylosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.


ensembl_gene_id: RA29_04305
symbol: KIC51095.1
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04310
symbol: KIC51096.1
gene_biotype: protein_coding
description:
  Lauroyl acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04330
symbol: KIC51100.1
gene_biotype: protein_coding
description:
  Thiol:disulfide interchange protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04335
symbol: KIC51101.1
gene_biotype: protein_coding
description:
  Hemagglutination activity protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family.


ensembl_gene_id: RA29_04340
symbol: ccmC
gene_biotype: protein_coding
description:
  Transcriptional regulator; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.


ensembl_gene_id: RA29_04345
symbol: KIC51103.1
gene_biotype: protein_coding
description:
  Heme transporter; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family.


ensembl_gene_id: RA29_04350
symbol: ccmA
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.


ensembl_gene_id: RA29_04370
symbol: secF
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: RA29_04375
symbol: secD
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: RA29_04380
symbol: yajC
gene_biotype: protein_coding
description:
  Preprotein translocase subunit YajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.


ensembl_gene_id: RA29_04390
symbol: serS
gene_biotype: protein_coding
description:
  serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: RA29_04400
symbol: KIC51113.1
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04405
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: RA29_04415
symbol: KIC51115.1
gene_biotype: protein_coding
description:
  Transcriptional regulatory protein AruR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04425
symbol: KIC51462.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M50B family.


ensembl_gene_id: RA29_04455
symbol: KIC51121.1
gene_biotype: protein_coding
description:
  Isoquinoline 1-oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04460
symbol: KIC51122.1
gene_biotype: protein_coding
description:
  Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04465
symbol: KIC51123.1
gene_biotype: protein_coding
description:
  MFS transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04470
symbol: KIC51124.1
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase; Catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: RA29_04475
symbol: KIC51125.1
gene_biotype: protein_coding
description:
  Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04480
symbol: KIC51126.1
gene_biotype: protein_coding
description:
  Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04485
symbol: KIC51127.1
gene_biotype: protein_coding
description:
  2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04490
symbol: KIC51128.1
gene_biotype: protein_coding
description:
  2-keto-3-deoxy-galactonokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04500
symbol: KIC51130.1
gene_biotype: protein_coding
description:
  Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04520
symbol: KIC51134.1
gene_biotype: protein_coding
description:
  IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04530
symbol: KIC51136.1
gene_biotype: protein_coding
description:
  Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: RA29_04540
symbol: KIC51138.1
gene_biotype: protein_coding
description:
  Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family.


ensembl_gene_id: RA29_04545
symbol: KIC51139.1
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: RA29_04555
symbol: KIC51141.1
gene_biotype: protein_coding
description:
  NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04565
symbol: KIC51143.1
gene_biotype: protein_coding
description:
  Molybdate ABC transporter permease; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: RA29_04570
symbol: modC
gene_biotype: protein_coding
description:
  Molybdenum ABC transporter ATP-binding protein; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family.


ensembl_gene_id: RA29_04575
symbol: KIC51465.1
gene_biotype: protein_coding
description:
  Protein EcsC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04585
symbol: KIC51145.1
gene_biotype: protein_coding
description:
  Flavin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04600
symbol: KIC51148.1
gene_biotype: protein_coding
description:
  Sulfate permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04610
symbol: mtnP
gene_biotype: protein_coding
description:
  5'-methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily.


ensembl_gene_id: RA29_04615
symbol: KIC51466.1
gene_biotype: protein_coding
description:
  Lysine transporter LysE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04620
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: RA29_04635
symbol: KIC51153.1
gene_biotype: protein_coding
description:
  2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04640
symbol: KIC51154.1
gene_biotype: protein_coding
description:
  Zn-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04650
symbol: KIC51156.1
gene_biotype: protein_coding
description:
  Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M16 family.


ensembl_gene_id: RA29_04655
symbol: KIC51157.1
gene_biotype: protein_coding
description:
  Threonine synthase; Catalyzes the formation of L-threonine from O-phospho-L-homoserine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04660
symbol: KIC51158.1
gene_biotype: protein_coding
description:
  Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04665
symbol: KIC51159.1
gene_biotype: protein_coding
description:
  Cytochrome B562; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04670
symbol: ctaG
gene_biotype: protein_coding
description:
  Cytochrome C oxidase assembly protein; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family.


ensembl_gene_id: RA29_04675
symbol: KIC51160.1
gene_biotype: protein_coding
description:
  Cytochrome C oxidase assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04680
symbol: ctaB
gene_biotype: protein_coding
description:
  Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily.


ensembl_gene_id: RA29_04685
symbol: KIC51468.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).


ensembl_gene_id: RA29_04690
symbol: tldD
gene_biotype: protein_coding
description:
  Protease TldD; Responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17, an exported protein that targets the essential topoisomerase II DNA gyrase; degrades the E. coli plasmid F-encoded CcdA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04695
symbol: KIC51163.1
gene_biotype: protein_coding
description:
  DNA processing protein DprA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04700
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: RA29_04715
symbol: KIC51469.1
gene_biotype: protein_coding
description:
  succinyl-CoA:3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04735
symbol: KIC51470.1
gene_biotype: protein_coding
description:
  Lytic murein transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04750
symbol: KIC51172.1
gene_biotype: protein_coding
description:
  Pilus assembly protein CpaB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04755
symbol: KIC51471.1
gene_biotype: protein_coding
description:
  General secretion pathway protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial secretin family.


ensembl_gene_id: RA29_04765
symbol: KIC51174.1
gene_biotype: protein_coding
description:
  Pilus assembly protein CpaE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04770
symbol: KIC51175.1
gene_biotype: protein_coding
description:
  Type II secretion system protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04775
symbol: KIC51176.1
gene_biotype: protein_coding
description:
  Pilus assembly protein TadB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04780
symbol: KIC51472.1
gene_biotype: protein_coding
description:
  Pilus assembly protein TadC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04805
symbol: KIC51181.1
gene_biotype: protein_coding
description:
  3-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04810
symbol: KIC51182.1
gene_biotype: protein_coding
description:
  Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04820
symbol: KIC51184.1
gene_biotype: protein_coding
description:
  Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04825
symbol: folD
gene_biotype: protein_coding
description:
  Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: RA29_04835
symbol: fhs
gene_biotype: protein_coding
description:
  Formate--tetrahydrofolate ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the formate--tetrahydrofolate ligase family.


ensembl_gene_id: RA29_04840
symbol: KIC51187.1
gene_biotype: protein_coding
description:
  Sulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04845
symbol: ftsH
gene_biotype: protein_coding
description:
  Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: RA29_04850
symbol: tilS
gene_biotype: protein_coding
description:
  Hypothetical protein; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: RA29_04855
symbol: cpoB
gene_biotype: protein_coding
description:
  Tol-pal system protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.


ensembl_gene_id: RA29_04860
symbol: pal
gene_biotype: protein_coding
description:
  Membrane protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: RA29_04865
symbol: tolB
gene_biotype: protein_coding
description:
  Translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: RA29_04870
symbol: KIC51193.1
gene_biotype: protein_coding
description:
  Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04875
symbol: KIC51194.1
gene_biotype: protein_coding
description:
  Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04880
symbol: tolQ
gene_biotype: protein_coding
description:
  Biopolymer transporter ExbB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: RA29_04890
symbol: KIC51196.1
gene_biotype: protein_coding
description:
  Dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04965
symbol: KIC51475.1
gene_biotype: protein_coding
description:
  Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_04995
symbol: KIC51206.1
gene_biotype: protein_coding
description:
  Ribonuclease G; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05000
symbol: KIC51207.1
gene_biotype: protein_coding
description:
  Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: RA29_05005
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: RA29_05010
symbol: KIC51476.1
gene_biotype: protein_coding
description:
  Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05020
symbol: cobB
gene_biotype: protein_coding
description:
  NAD-dependent deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sirtuin family. Class III subfamily.


ensembl_gene_id: RA29_05025
symbol: KIC51211.1
gene_biotype: protein_coding
description:
  Copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05035
symbol: rpmB
gene_biotype: protein_coding
description:
  50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family.


ensembl_gene_id: RA29_05040
symbol: KIC51478.1
gene_biotype: protein_coding
description:
  Arginine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05045
symbol: KIC51212.1
gene_biotype: protein_coding
description:
  ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05050
symbol: KIC51213.1
gene_biotype: protein_coding
description:
  2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.


ensembl_gene_id: RA29_05055
symbol: KIC51214.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: RA29_05060
symbol: argD
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase; Catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: RA29_05070
symbol: KIC51216.1
gene_biotype: protein_coding
description:
  GcrA cell cycle regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05085
symbol: KIC51219.1
gene_biotype: protein_coding
description:
  Acetolactate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.


ensembl_gene_id: RA29_05090
symbol: KIC51220.1
gene_biotype: protein_coding
description:
  CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CoA-transferase III family.


ensembl_gene_id: RA29_05105
symbol: KIC51480.1
gene_biotype: protein_coding
description:
  Glucan biosynthesis protein G; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs).


ensembl_gene_id: RA29_05110
symbol: KIC51481.1
gene_biotype: protein_coding
description:
  Glucosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05130
symbol: KIC51224.1
gene_biotype: protein_coding
description:
  uracil-DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05145
symbol: nhaA
gene_biotype: protein_coding
description:
  Sodium:proton antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.


ensembl_gene_id: RA29_05155
symbol: KIC51229.1
gene_biotype: protein_coding
description:
  Capsule biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05160
symbol: kdsA
gene_biotype: protein_coding
description:
  2-dehydro-3-deoxyphosphooctonate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the KdsA family.


ensembl_gene_id: RA29_05165
symbol: KIC51231.1
gene_biotype: protein_coding
description:
  Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05170
symbol: KIC51232.1
gene_biotype: protein_coding
description:
  Cell envelope biogenesis protein AsmA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05175
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: RA29_05185
symbol: KIC51485.1
gene_biotype: protein_coding
description:
  Thiol-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05190
symbol: KIC51234.1
gene_biotype: protein_coding
description:
  Hemolysin III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05210
symbol: KIC51487.1
gene_biotype: protein_coding
description:
  Peptidase M48; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05215
symbol: KIC51237.1
gene_biotype: protein_coding
description:
  Phosphomannomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05240
symbol: KIC51241.1
gene_biotype: protein_coding
description:
  Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05245
symbol: KIC51242.1
gene_biotype: protein_coding
description:
  Aldehyde-activating protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05250
symbol: KIC51243.1
gene_biotype: protein_coding
description:
  Peptidase M22; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05265
symbol: KIC51246.1
gene_biotype: protein_coding
description:
  Heme ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05270
symbol: KIC51247.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: RA29_05295
symbol: KIC51252.1
gene_biotype: protein_coding
description:
  Autoinducer synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05310
symbol: KIC51255.1
gene_biotype: protein_coding
description:
  crotonyl-CoA reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05325
symbol: KIC51257.1
gene_biotype: protein_coding
description:
  Protein meaA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05335
symbol: deoD
gene_biotype: protein_coding
description:
  Purine nucleoside phosphorylase DeoD-type; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05350
symbol: KIC51262.1
gene_biotype: protein_coding
description:
  Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.


ensembl_gene_id: RA29_05365
symbol: KIC51264.1
gene_biotype: protein_coding
description:
  Part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.


ensembl_gene_id: RA29_05370
symbol: KIC51265.1
gene_biotype: protein_coding
description:
  Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05405
symbol: KIC51271.1
gene_biotype: protein_coding
description:
  malyl-CoA thiolesterase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family.


ensembl_gene_id: RA29_05425
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.


ensembl_gene_id: RA29_05440
symbol: sucC
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: RA29_05455
symbol: sucD
gene_biotype: protein_coding
description:
  succinate--CoA ligase; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: RA29_05460
symbol: sucA
gene_biotype: protein_coding
description:
  SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05465
symbol: KIC51282.1
gene_biotype: protein_coding
description:
  2-oxoglutarate dehydrogenase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: RA29_05490
symbol: KIC51286.1
gene_biotype: protein_coding
description:
  E3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05505
symbol: KIC51288.1
gene_biotype: protein_coding
description:
  Pyridoxamine 5'-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05510
symbol: KIC51289.1
gene_biotype: protein_coding
description:
  Glycerol acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05515
symbol: KIC51290.1
gene_biotype: protein_coding
description:
  Cell division protein FtsX; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05520
symbol: KIC51291.1
gene_biotype: protein_coding
description:
  Cell division protein FtsE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05535
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: RA29_05540
symbol: KIC51295.1
gene_biotype: protein_coding
description:
  K+-transporting ATPase, A chain; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05545
symbol: argH
gene_biotype: protein_coding
description:
  Argininosuccinate lyase; Catalyzes the formation of arginine from (N-L-arginino)succinate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05550
symbol: KIC51297.1
gene_biotype: protein_coding
description:
  Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05565
symbol: KIC51491.1
gene_biotype: protein_coding
description:
  Hemolysin-type calcium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05570
symbol: KIC51298.1
gene_biotype: protein_coding
description:
  AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05585
symbol: KIC51300.1
gene_biotype: protein_coding
description:
  Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05590
symbol: KIC51493.1
gene_biotype: protein_coding
description:
  Nitrate ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05600
symbol: KIC51302.1
gene_biotype: protein_coding
description:
  Cytosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05605
symbol: KIC51303.1
gene_biotype: protein_coding
description:
  FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05610
symbol: KIC51494.1
gene_biotype: protein_coding
description:
  NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05620
symbol: KIC51305.1
gene_biotype: protein_coding
description:
  2OG-Fe(II) oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron/ascorbate-dependent oxidoreductase family.


ensembl_gene_id: RA29_05630
symbol: KIC51495.1
gene_biotype: protein_coding
description:
  Quinoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05640
symbol: KIC51497.1
gene_biotype: protein_coding
description:
  Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: RA29_05645
symbol: KIC51307.1
gene_biotype: protein_coding
description:
  Acriflavine resistance protein B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: RA29_05650
symbol: KIC51308.1
gene_biotype: protein_coding
description:
  Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05660
symbol: KIC51310.1
gene_biotype: protein_coding
description:
  Decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LOG family.


ensembl_gene_id: RA29_05665
symbol: KIC51311.1
gene_biotype: protein_coding
description:
  Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: RA29_05670
symbol: KIC51312.1
gene_biotype: protein_coding
description:
  Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05675
symbol: KIC51313.1
gene_biotype: protein_coding
description:
  Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.


ensembl_gene_id: RA29_05680
symbol: KIC51314.1
gene_biotype: protein_coding
description:
  Sarcosine oxidase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05700
symbol: KIC51318.1
gene_biotype: protein_coding
description:
  Sarcosine oxidase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05710
symbol: KIC51320.1
gene_biotype: protein_coding
description:
  Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: RA29_05725
symbol: dusA
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase A; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily.


ensembl_gene_id: RA29_05755
symbol: KIC51328.1
gene_biotype: protein_coding
description:
  Beta lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05770
symbol: KIC51331.1
gene_biotype: protein_coding
description:
  C4-dicarboxylate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05775
symbol: acsA
gene_biotype: protein_coding
description:
  acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: RA29_05790
symbol: KIC51335.1
gene_biotype: protein_coding
description:
  Carnitine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CoA-transferase III family.


ensembl_gene_id: RA29_05810
symbol: KIC51338.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: RA29_05815
symbol: KIC51339.1
gene_biotype: protein_coding
description:
  D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05830
symbol: KIC51342.1
gene_biotype: protein_coding
description:
  Peptidase M19; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05840
symbol: KIC51500.1
gene_biotype: protein_coding
description:
  Sulfate:proton symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05845
symbol: KIC51344.1
gene_biotype: protein_coding
description:
  NAD(FAD)-dependent dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05850
symbol: KIC51345.1
gene_biotype: protein_coding
description:
  Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05870
symbol: KIC51349.1
gene_biotype: protein_coding
description:
  Rrf2 family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05885
symbol: KIC51350.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: RA29_05890
symbol: KIC51351.1
gene_biotype: protein_coding
description:
  Multidrug transporter AcrB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: RA29_05895
symbol: gltS
gene_biotype: protein_coding
description:
  Glutamate permease; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family.


ensembl_gene_id: RA29_05900
symbol: KIC51353.1
gene_biotype: protein_coding
description:
  Epoxide hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_05940
symbol: KIC51359.1
gene_biotype: protein_coding
description:
  DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06000
symbol: KIC51370.1
gene_biotype: protein_coding
description:
  Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06010
symbol: KIC51502.1
gene_biotype: protein_coding
description:
  Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06015
symbol: KIC51503.1
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein CcmE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06030
symbol: KIC51374.1
gene_biotype: protein_coding
description:
  Methionine gamma-lyase; Catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06035
symbol: KIC51504.1
gene_biotype: protein_coding
description:
  Glycine cleavage system protein T; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.


ensembl_gene_id: RA29_06040
symbol: KIC51375.1
gene_biotype: protein_coding
description:
  Transketolase; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: RA29_06045
symbol: KIC51376.1
gene_biotype: protein_coding
description:
  Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06065
symbol: KIC51380.1
gene_biotype: protein_coding
description:
  DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06070
symbol: KIC51381.1
gene_biotype: protein_coding
description:
  Ribonucleotide reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: RA29_06075
symbol: KIC51382.1
gene_biotype: protein_coding
description:
  Lysophospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06080
symbol: KIC51383.1
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity.


ensembl_gene_id: RA29_06085
symbol: KIC51384.1
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06090
symbol: hisS
gene_biotype: protein_coding
description:
  histidine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06095
symbol: KIC51386.1
gene_biotype: protein_coding
description:
  SlyX family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06105
symbol: KIC51387.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06120
symbol: KIC51390.1
gene_biotype: protein_coding
description:
  FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06125
symbol: KIC51391.1
gene_biotype: protein_coding
description:
  Aldehyde oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06135
symbol: KIC50300.1
gene_biotype: protein_coding
description:
  Threonine transporter RhtB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06140
symbol: KIC50301.1
gene_biotype: protein_coding
description:
  Molybdopterin biosynthesis protein B; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family.


ensembl_gene_id: RA29_06160
symbol: KIC50499.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0301 (AlgH) family.


ensembl_gene_id: RA29_06165
symbol: KIC50500.1
gene_biotype: protein_coding
description:
  Translation factor Sua5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: RA29_06175
symbol: KIC50306.1
gene_biotype: protein_coding
description:
  Metallo-beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06185
symbol: KIC50307.1
gene_biotype: protein_coding
description:
  Cytochrome C oxidase subunit IV; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06190
symbol: KIC50308.1
gene_biotype: protein_coding
description:
  Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06200
symbol: KIC50310.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid transporter AzlC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06205
symbol: fdhD
gene_biotype: protein_coding
description:
  Formate dehydrogenase; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.


ensembl_gene_id: RA29_06210
symbol: mobA
gene_biotype: protein_coding
description:
  Molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.


ensembl_gene_id: RA29_06215
symbol: KIC50313.1
gene_biotype: protein_coding
description:
  Molybdopterin-guanine dinucleotide biosynthesis protein MobB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06225
symbol: KIC50314.1
gene_biotype: protein_coding
description:
  Molybdopterin biosynthesis protein MoeA; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: RA29_06240
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: RA29_06255
symbol: KIC50320.1
gene_biotype: protein_coding
description:
  Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.


ensembl_gene_id: RA29_06260
symbol: KIC50502.1
gene_biotype: protein_coding
description:
  Tetratricopeptide TPR_2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06265
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: RA29_06270
symbol: KIC50322.1
gene_biotype: protein_coding
description:
  Farnesyltranstransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: RA29_06280
symbol: KIC50323.1
gene_biotype: protein_coding
description:
  Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methyltransferase superfamily.


ensembl_gene_id: RA29_06300
symbol: KIC50326.1
gene_biotype: protein_coding
description:
  acetoacetyl-CoA reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06310
symbol: KIC50328.1
gene_biotype: protein_coding
description:
  Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06315
symbol: KIC50504.1
gene_biotype: protein_coding
description:
  DNA-3-methyladenine glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06320
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: RA29_06325
symbol: KIC50330.1
gene_biotype: protein_coding
description:
  Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06345
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase; Catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: RA29_06350
symbol: KIC50505.1
gene_biotype: protein_coding
description:
  Cyclohexadienyl dehydrogenase; Dual function enzyme catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06365
symbol: KIC50336.1
gene_biotype: protein_coding
description:
  Gamma-glutamyl cyclotransferase; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.


ensembl_gene_id: RA29_06375
symbol: KIC50337.1
gene_biotype: protein_coding
description:
  Flagellar motor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06385
symbol: clpA
gene_biotype: protein_coding
description:
  Clp protease ClpX; ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease; directs protease to specific substrates; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpA/ClpB family.


ensembl_gene_id: RA29_06390
symbol: gloB
gene_biotype: protein_coding
description:
  Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.


ensembl_gene_id: RA29_06395
symbol: KIC50340.1
gene_biotype: protein_coding
description:
  ATP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06405
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase F0F1 subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: RA29_06410
symbol: atpA
gene_biotype: protein_coding
description:
  ATP F0F1 synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: RA29_06415
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: RA29_06420
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase F0F1 subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: RA29_06425
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase F0F1 subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: RA29_06440
symbol: KIC50348.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06460
symbol: prs
gene_biotype: protein_coding
description:
  Phosphoribosylpyrophosphate synthetase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: RA29_06465
symbol: KIC50353.1
gene_biotype: protein_coding
description:
  2-hydroxychromene-2-carboxylate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06475
symbol: KIC50355.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0260 family.


ensembl_gene_id: RA29_06480
symbol: KIC50356.1
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibF; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribF family.


ensembl_gene_id: RA29_06495
symbol: KIC50359.1
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06510
symbol: groS
gene_biotype: protein_coding
description:
  Molecular chaperone GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: RA29_06515
symbol: groEL
gene_biotype: protein_coding
description:
  Molecular chaperone GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: RA29_06520
symbol: KIC50364.1
gene_biotype: protein_coding
description:
  Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06555
symbol: KIC50370.1
gene_biotype: protein_coding
description:
  Phosphonate metabolism protein PhnM; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06560
symbol: purK
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: RA29_06565
symbol: purE
gene_biotype: protein_coding
description:
  N5-carboxyaminoimidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: RA29_06580
symbol: KIC50374.1
gene_biotype: protein_coding
description:
  Heat-shock protein Hsp20; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: RA29_06595
symbol: KIC50509.1
gene_biotype: protein_coding
description:
  Phenazine biosynthesis protein PhzF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06610
symbol: KIC50377.1
gene_biotype: protein_coding
description:
  Thioredoxin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06625
symbol: KIC50379.1
gene_biotype: protein_coding
description:
  Polyphenol oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the multicopper oxidase YfiH/RL5 family.


ensembl_gene_id: RA29_06630
symbol: KIC50380.1
gene_biotype: protein_coding
description:
  ATP synthase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06635
symbol: lgt
gene_biotype: protein_coding
description:
  Diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: RA29_06640
symbol: KIC50382.1
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06655
symbol: KIC50385.1
gene_biotype: protein_coding
description:
  Diacylglyceryl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06660
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: RA29_06665
symbol: KIC50387.1
gene_biotype: protein_coding
description:
  tRNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06670
symbol: KIC50388.1
gene_biotype: protein_coding
description:
  2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: RA29_06700
symbol: KIC50393.1
gene_biotype: protein_coding
description:
  Universal stress protein UspA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06715
symbol: KIC50396.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: RA29_06720
symbol: tdk
gene_biotype: protein_coding
description:
  Thymidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06740
symbol: KIC50401.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0386 family.


ensembl_gene_id: RA29_06745
symbol: KIC50402.1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06770
symbol: KIC50406.1
gene_biotype: protein_coding
description:
  Bicyclomycin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06780
symbol: KIC50408.1
gene_biotype: protein_coding
description:
  Choline dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06785
symbol: KIC50514.1
gene_biotype: protein_coding
description:
  TRAP transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06815
symbol: KIC50515.1
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06820
symbol: KIC50414.1
gene_biotype: protein_coding
description:
  Antibiotic biosynthesis monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06875
symbol: KIC50421.1
gene_biotype: protein_coding
description:
  Erythromycin biosynthesis sensory transduction protein eryC1; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: RA29_06885
symbol: KIC50423.1
gene_biotype: protein_coding
description:
  Acriflavin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: RA29_06900
symbol: KIC50425.1
gene_biotype: protein_coding
description:
  Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06930
symbol: KIC50519.1
gene_biotype: protein_coding
description:
  Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.


ensembl_gene_id: RA29_06945
symbol: ureG
gene_biotype: protein_coding
description:
  Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.


ensembl_gene_id: RA29_06950
symbol: ureF
gene_biotype: protein_coding
description:
  Urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.


ensembl_gene_id: RA29_06955
symbol: ureE
gene_biotype: protein_coding
description:
  Urease accessory protein UreE; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.


ensembl_gene_id: RA29_06965
symbol: ureC
gene_biotype: protein_coding
description:
  Urease subunit alpha; Ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06980
symbol: KIC50438.1
gene_biotype: protein_coding
description:
  Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_06985
symbol: ureB
gene_biotype: protein_coding
description:
  Urease subunit beta; Ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem  [...]


ensembl_gene_id: RA29_06990
symbol: ureA
gene_biotype: protein_coding
description:
  Urease subunit gamma; UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the urease gamma subunit family.


ensembl_gene_id: RA29_06995
symbol: ureD
gene_biotype: protein_coding
description:
  Urease accessory protein ureD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.


ensembl_gene_id: RA29_07000
symbol: KIC50441.1
gene_biotype: protein_coding
description:
  Precorrin 6A synthase; Catalyzes the methylation of C-1 in precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A.


ensembl_gene_id: RA29_07005
symbol: KIC50442.1
gene_biotype: protein_coding
description:
  uroporphyrin-III methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the precorrin methyltransferase family.


ensembl_gene_id: RA29_07010
symbol: cobB-2
gene_biotype: protein_coding
description:
  Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: RA29_07015
symbol: KIC50444.1
gene_biotype: protein_coding
description:
  Precorrin-4 C11-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07025
symbol: KIC50446.1
gene_biotype: protein_coding
description:
  precorrin-6Y methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07030
symbol: KIC50447.1
gene_biotype: protein_coding
description:
  cobalt-precorrin-6X reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07035
symbol: KIC50448.1
gene_biotype: protein_coding
description:
  Catalyzes the formation of precorrin-4 from precorrin-3B and S-adenosyl-L-methionine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07040
symbol: KIC50521.1
gene_biotype: protein_coding
description:
  Catalyzes the formation of precorrin-3 from precorrin-2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07045
symbol: cobH
gene_biotype: protein_coding
description:
  Catalyzes the interconversion of precorrin-8X and hydrogenobyrinate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07055
symbol: cobN
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CobN; With CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07060
symbol: KIC50452.1
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CobW; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07065
symbol: KIC50453.1
gene_biotype: protein_coding
description:
  Metal-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07075
symbol: KIC50454.1
gene_biotype: protein_coding
description:
  Cobinamide adenolsyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.


ensembl_gene_id: RA29_07085
symbol: cobQ
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: RA29_07090
symbol: KIC50457.1
gene_biotype: protein_coding
description:
  Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07095
symbol: KIC50458.1
gene_biotype: protein_coding
description:
  Transglutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07100
symbol: KIC50459.1
gene_biotype: protein_coding
description:
  A alpha-helical domain with a conserved ER moti; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07145
symbol: KIC50466.1
gene_biotype: protein_coding
description:
  GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07150
symbol: KIC50467.1
gene_biotype: protein_coding
description:
  Thioredoxin-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07160
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: RA29_07170
symbol: priA
gene_biotype: protein_coding
description:
  Primosome assembly protein PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: RA29_07175
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: RA29_07180
symbol: KIC50473.1
gene_biotype: protein_coding
description:
  Recombinase XerC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07185
symbol: xerC
gene_biotype: protein_coding
description:
  Recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: RA29_07190
symbol: KIC50475.1
gene_biotype: protein_coding
description:
  Phosphatidylcholine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07195
symbol: KIC50523.1
gene_biotype: protein_coding
description:
  Cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: RA29_07205
symbol: KIC50477.1
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07225
symbol: ruvA
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: RA29_07230
symbol: ruvB
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: RA29_07260
symbol: KIC50485.1
gene_biotype: protein_coding
description:
  protein-L-isoaspartate O-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07275
symbol: KIC50486.1
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CobQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07280
symbol: KIC50487.1
gene_biotype: protein_coding
description:
  Elongation factor P; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07285
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: RA29_07295
symbol: KIC50490.1
gene_biotype: protein_coding
description:
  Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.


ensembl_gene_id: RA29_07305
symbol: KIC50492.1
gene_biotype: protein_coding
description:
  Septum site-determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07325
symbol: KIC50496.1
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase; Catalyzes the formation of histidinol phosphate and 2-oxoglutarate from glutamate and imidazole acetol-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07330
symbol: KIC50497.1
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: RA29_07345
symbol: valS
gene_biotype: protein_coding
description:
  valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: RA29_07365
symbol: rlmH
gene_biotype: protein_coding
description:
  50S rRNA methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: RA29_07370
symbol: rsfS
gene_biotype: protein_coding
description:
  Hypothetical protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: RA29_07395
symbol: KIC50149.1
gene_biotype: protein_coding
description:
  Mechanosensitive ion channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07400
symbol: leuC
gene_biotype: protein_coding
description:
  Isopropylmalate isomerase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: RA29_07405
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: RA29_07420
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: RA29_07450
symbol: KIC49524.1
gene_biotype: protein_coding
description:
  Carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07470
symbol: KIC49527.1
gene_biotype: protein_coding
description:
  Catalyzes the formation of protocatechuate from 4-hydroxybenzoate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07485
symbol: KIC49529.1
gene_biotype: protein_coding
description:
  L-dehydroascorbate transporter large permease subunit; TRAP family transporter; with YiaMO is involved in the uptake of L-dehydroascorbate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07555
symbol: KIC49538.1
gene_biotype: protein_coding
description:
  Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07585
symbol: KIC49541.1
gene_biotype: protein_coding
description:
  Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07615
symbol: KIC49547.1
gene_biotype: protein_coding
description:
  XdhC /CoxI family-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07675
symbol: KIC50152.1
gene_biotype: protein_coding
description:
  Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron/ascorbate-dependent oxidoreductase family.


ensembl_gene_id: RA29_07725
symbol: KIC49564.1
gene_biotype: protein_coding
description:
  Allophanate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07730
symbol: KIC49565.1
gene_biotype: protein_coding
description:
  Urea amidolyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07735
symbol: KIC49566.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.


ensembl_gene_id: RA29_07755
symbol: KIC50154.1
gene_biotype: protein_coding
description:
  Vi polysaccharide biosynthesis protein VipA/TviB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: RA29_07785
symbol: KIC49573.1
gene_biotype: protein_coding
description:
  Glucuronate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07805
symbol: KIC49576.1
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07815
symbol: KIC49578.1
gene_biotype: protein_coding
description:
  Galactarate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07840
symbol: KIC49581.1
gene_biotype: protein_coding
description:
  NAD-dependent epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07845
symbol: KIC49582.1
gene_biotype: protein_coding
description:
  2-hydroxy-3-oxopropionate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07855
symbol: KIC49584.1
gene_biotype: protein_coding
description:
  Dihydroxy-acid dehydratase; Catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IlvD/Edd family.


ensembl_gene_id: RA29_07860
symbol: KIC49585.1
gene_biotype: protein_coding
description:
  2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07870
symbol: KIC49587.1
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mandelate racemase/muconate lactonizing enzyme family.


ensembl_gene_id: RA29_07875
symbol: KIC49588.1
gene_biotype: protein_coding
description:
  Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family.


ensembl_gene_id: RA29_07880
symbol: KIC50157.1
gene_biotype: protein_coding
description:
  Peptidase M23B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07900
symbol: dnaE2
gene_biotype: protein_coding
description:
  DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.


ensembl_gene_id: RA29_07915
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: RA29_07930
symbol: KIC49595.1
gene_biotype: protein_coding
description:
  Hydroxypyruvate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the hyi family.


ensembl_gene_id: RA29_07935
symbol: KIC50160.1
gene_biotype: protein_coding
description:
  Proteophosphoglycan precursor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07950
symbol: KIC49598.1
gene_biotype: protein_coding
description:
  LytTR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07960
symbol: KIC49600.1
gene_biotype: protein_coding
description:
  Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07965
symbol: KIC49601.1
gene_biotype: protein_coding
description:
  PAN domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07980
symbol: KIC49603.1
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_07990
symbol: KIC49605.1
gene_biotype: protein_coding
description:
  Thioeseterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08010
symbol: KIC49608.1
gene_biotype: protein_coding
description:
  Membrane protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: RA29_08020
symbol: KIC49610.1
gene_biotype: protein_coding
description:
  Peptide chain release factor I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08035
symbol: pncB
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.


ensembl_gene_id: RA29_08040
symbol: KIC49614.1
gene_biotype: protein_coding
description:
  Nicotinamidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08045
symbol: KIC50162.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0176 family.


ensembl_gene_id: RA29_08055
symbol: KIC49616.1
gene_biotype: protein_coding
description:
  Chemotaxis protein MotB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08060
symbol: KIC49617.1
gene_biotype: protein_coding
description:
  Flagellar hook protein FlgE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08065
symbol: KIC49618.1
gene_biotype: protein_coding
description:
  Flagellar hook protein FlgK; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: RA29_08070
symbol: KIC49619.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: RA29_08075
symbol: flgI
gene_biotype: protein_coding
description:
  Flagellar basal body P-ring biosynthesis protein FlgA; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: RA29_08080
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein flip; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: RA29_08095
symbol: KIC49623.1
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: RA29_08100
symbol: KIC49624.1
gene_biotype: protein_coding
description:
  Flagellar basal body protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: RA29_08115
symbol: KIC49627.1
gene_biotype: protein_coding
description:
  Flagellar motor protein MotA; With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08125
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: RA29_08130
symbol: KIC49630.1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08135
symbol: KIC49631.1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08145
symbol: KIC49633.1
gene_biotype: protein_coding
description:
  Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: RA29_08150
symbol: flgH
gene_biotype: protein_coding
description:
  Flagellar L-ring protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: RA29_08155
symbol: flgA
gene_biotype: protein_coding
description:
  Flagellar basal body P-ring biosynthesis protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.


ensembl_gene_id: RA29_08160
symbol: flgG
gene_biotype: protein_coding
description:
  Makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagella; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08165
symbol: flgF
gene_biotype: protein_coding
description:
  Flagellar basal body rod protein FlgF; FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Rhodobacter sphaeroides has 2 copies of this and other flagella genes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08170
symbol: KIC49637.1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08175
symbol: KIC49638.1
gene_biotype: protein_coding
description:
  Flagellar hook-basal body protein FliE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08180
symbol: flgC
gene_biotype: protein_coding
description:
  Flagellar basal body rod protein FlgC; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: RA29_08190
symbol: fliI
gene_biotype: protein_coding
description:
  ATP synthase; Involved in type III protein export during flagellum assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08195
symbol: KIC49642.1
gene_biotype: protein_coding
description:
  Flagellar protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08200
symbol: KIC49643.1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis repressor FlbT; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08205
symbol: KIC49644.1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis regulator FlhF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08210
symbol: KIC49645.1
gene_biotype: protein_coding
description:
  Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: RA29_08240
symbol: KIC49650.1
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08245
symbol: KIC49651.1
gene_biotype: protein_coding
description:
  Putrescine/spermidine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08250
symbol: potA
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: RA29_08255
symbol: KIC50165.1
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.


ensembl_gene_id: RA29_08260
symbol: KIC49653.1
gene_biotype: protein_coding
description:
  Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: RA29_08265
symbol: potA-2
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: RA29_08270
symbol: KIC49654.1
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08280
symbol: KIC49656.1
gene_biotype: protein_coding
description:
  Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08305
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: RA29_08315
symbol: KIC49663.1
gene_biotype: protein_coding
description:
  Drug:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08320
symbol: dapE
gene_biotype: protein_coding
description:
  Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.


ensembl_gene_id: RA29_08335
symbol: ade
gene_biotype: protein_coding
description:
  Adenine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.


ensembl_gene_id: RA29_08340
symbol: amn
gene_biotype: protein_coding
description:
  AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations.


ensembl_gene_id: RA29_08345
symbol: KIC49669.1
gene_biotype: protein_coding
description:
  DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial histone-like protein family.


ensembl_gene_id: RA29_08370
symbol: KIC49673.1
gene_biotype: protein_coding
description:
  Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08380
symbol: KIC49674.1
gene_biotype: protein_coding
description:
  Sugar transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08385
symbol: KIC50168.1
gene_biotype: protein_coding
description:
  Nucleotide sugar epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08390
symbol: KIC50169.1
gene_biotype: protein_coding
description:
  Outer membrane lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08415
symbol: KIC49679.1
gene_biotype: protein_coding
description:
  Glutathione peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutathione peroxidase family.


ensembl_gene_id: RA29_08420
symbol: msrB
gene_biotype: protein_coding
description:
  Methionine sulfoxide reductase B; This stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08425
symbol: msrA
gene_biotype: protein_coding
description:
  Methionine sulfoxide reductase A; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: RA29_08435
symbol: KIC49682.1
gene_biotype: protein_coding
description:
  Hydantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08440
symbol: KIC49683.1
gene_biotype: protein_coding
description:
  Epoxyqueuosine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08450
symbol: mtgA
gene_biotype: protein_coding
description:
  Peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.


ensembl_gene_id: RA29_08465
symbol: KIC49688.1
gene_biotype: protein_coding
description:
  Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08480
symbol: KIC49689.1
gene_biotype: protein_coding
description:
  Dihydropyrimidine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08485
symbol: uppP
gene_biotype: protein_coding
description:
  UDP pyrophosphate phosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: RA29_08490
symbol: KIC49691.1
gene_biotype: protein_coding
description:
  3-beta hydroxysteroid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08505
symbol: KIC49692.1
gene_biotype: protein_coding
description:
  Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flavin oxidoreductase frp family.


ensembl_gene_id: RA29_08510
symbol: KIC49693.1
gene_biotype: protein_coding
description:
  Fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08530
symbol: KIC49697.1
gene_biotype: protein_coding
description:
  Fumarate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08585
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: RA29_08590
symbol: KIC49705.1
gene_biotype: protein_coding
description:
  2-methylthioadenine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08600
symbol: KIC49707.1
gene_biotype: protein_coding
description:
  Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: RA29_08605
symbol: KIC50173.1
gene_biotype: protein_coding
description:
  Ubiquinol-cytochrome C reductase; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: RA29_08615
symbol: KIC49709.1
gene_biotype: protein_coding
description:
  Negative transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08620
symbol: ribH
gene_biotype: protein_coding
description:
  Riboflavin synthase subunit beta; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: RA29_08625
symbol: thiQ
gene_biotype: protein_coding
description:
  Thiamine ABC transporter ATP-binding protein; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family.


ensembl_gene_id: RA29_08635
symbol: tbpA
gene_biotype: protein_coding
description:
  Thiamine ABC transporter substrate-binding protein; Part of the thiamine and TPP transport system tbpA-thiPQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08640
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: RA29_08665
symbol: ilvE
gene_biotype: protein_coding
description:
  Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: RA29_08680
symbol: KIC49720.1
gene_biotype: protein_coding
description:
  Acetoin utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08685
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: RA29_08690
symbol: KIC49722.1
gene_biotype: protein_coding
description:
  Farnesyl-diphosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: RA29_08695
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: RA29_08730
symbol: dapD
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transferase hexapeptide repeat family.


ensembl_gene_id: RA29_08735
symbol: KIC49730.1
gene_biotype: protein_coding
description:
  Lysine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LOG family.


ensembl_gene_id: RA29_08760
symbol: rlmN
gene_biotype: protein_coding
description:
  RNA methyltransferase RlmN; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: RA29_08775
symbol: KIC49734.1
gene_biotype: protein_coding
description:
  L-asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08780
symbol: KIC49735.1
gene_biotype: protein_coding
description:
  Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08785
symbol: KIC49736.1
gene_biotype: protein_coding
description:
  Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.


ensembl_gene_id: RA29_08790
symbol: KIC49737.1
gene_biotype: protein_coding
description:
  3-phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: RA29_08800
symbol: KIC49739.1
gene_biotype: protein_coding
description:
  Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08805
symbol: KIC49740.1
gene_biotype: protein_coding
description:
  Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08810
symbol: tdh
gene_biotype: protein_coding
description:
  L-threonine 3-dehydrogenase; Converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08815
symbol: kbl
gene_biotype: protein_coding
description:
  2-amino-3-ketobutyrate CoA ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.


ensembl_gene_id: RA29_08825
symbol: KIC49744.1
gene_biotype: protein_coding
description:
  acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: RA29_08830
symbol: KIC49745.1
gene_biotype: protein_coding
description:
  2-octaprenylphenol hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily.


ensembl_gene_id: RA29_08835
symbol: ubiE
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).


ensembl_gene_id: RA29_08840
symbol: mutM
gene_biotype: protein_coding
description:
  5-hydroxymethyluracil DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: RA29_08860
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: RA29_08865
symbol: KIC49752.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of  [...]


ensembl_gene_id: RA29_08870
symbol: recF
gene_biotype: protein_coding
description:
  Recombinase RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: RA29_08875
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: RA29_08900
symbol: KIC49759.1
gene_biotype: protein_coding
description:
  Ubiquinol-cytochrome C reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08910
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: RA29_08915
symbol: tsaD
gene_biotype: protein_coding
description:
  Protein kinase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: RA29_08920
symbol: KIC49763.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: RA29_08930
symbol: KIC49764.1
gene_biotype: protein_coding
description:
  Heme biosynthesis protein HemY; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08935
symbol: KIC50178.1
gene_biotype: protein_coding
description:
  Polysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08940
symbol: ahcY
gene_biotype: protein_coding
description:
  S-adenosyl-L-homocysteine hydrolase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: RA29_08975
symbol: KIC49769.1
gene_biotype: protein_coding
description:
  Protein senC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08990
symbol: KIC49771.1
gene_biotype: protein_coding
description:
  ATPase or kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_08995
symbol: KIC49772.1
gene_biotype: protein_coding
description:
  Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09000
symbol: KIC49773.1
gene_biotype: protein_coding
description:
  Nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09010
symbol: KIC49775.1
gene_biotype: protein_coding
description:
  Helicase UvrD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily.


ensembl_gene_id: RA29_09015
symbol: KIC49776.1
gene_biotype: protein_coding
description:
  Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thioredoxin family.


ensembl_gene_id: RA29_09025
symbol: hslV
gene_biotype: protein_coding
description:
  ATP-dependent protease subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: RA29_09035
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent protease; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: RA29_09045
symbol: KIC49780.1
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09055
symbol: KIC49782.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit Tim44; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09060
symbol: KIC49783.1
gene_biotype: protein_coding
description:
  Exlusion protein FxsA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09065
symbol: secB
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.


ensembl_gene_id: RA29_09070
symbol: dnaQ
gene_biotype: protein_coding
description:
  DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.


ensembl_gene_id: RA29_09075
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: RA29_09080
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: RA29_09085
symbol: KIC49788.1
gene_biotype: protein_coding
description:
  Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: RA29_09095
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: RA29_09100
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: RA29_09105
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification protein; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: RA29_09110
symbol: rsmG
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.


ensembl_gene_id: RA29_09115
symbol: KIC49793.1
gene_biotype: protein_coding
description:
  Chromosome partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09120
symbol: KIC49794.1
gene_biotype: protein_coding
description:
  Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family.


ensembl_gene_id: RA29_09125
symbol: KIC49795.1
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: RA29_09130
symbol: KIC49796.1
gene_biotype: protein_coding
description:
  Nucleoside-triphosphate diphosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: RA29_09135
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: RA29_09140
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: RA29_09145
symbol: grpE
gene_biotype: protein_coding
description:
  Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...]


ensembl_gene_id: RA29_09150
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: RA29_09155
symbol: KIC49801.1
gene_biotype: protein_coding
description:
  Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09160
symbol: rbsK
gene_biotype: protein_coding
description:
  Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.


ensembl_gene_id: RA29_09165
symbol: msrA-2
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: RA29_09170
symbol: KIC50183.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09175
symbol: argG
gene_biotype: protein_coding
description:
  Argininosuccinate synthase; Catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the argininosuccinate synthase family. Type 1 subfamily.


ensembl_gene_id: RA29_09180
symbol: ilvA
gene_biotype: protein_coding
description:
  Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: RA29_09200
symbol: KIC49807.1
gene_biotype: protein_coding
description:
  Molecular chaperone Hsp33; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress; Belongs to the HSP33 family.


ensembl_gene_id: RA29_09210
symbol: KIC49809.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: RA29_09215
symbol: KIC49810.1
gene_biotype: protein_coding
description:
  Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09225
symbol: KIC49812.1
gene_biotype: protein_coding
description:
  RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: RA29_09230
symbol: KIC49813.1
gene_biotype: protein_coding
description:
  Voltage-gated sodium channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09250
symbol: KIC49816.1
gene_biotype: protein_coding
description:
  Ferrochelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09255
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: RA29_09260
symbol: KIC49818.1
gene_biotype: protein_coding
description:
  SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09265
symbol: KIC49819.1
gene_biotype: protein_coding
description:
  Competence protein ComF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09270
symbol: KIC49820.1
gene_biotype: protein_coding
description:
  Glutaredoxin; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.


ensembl_gene_id: RA29_09285
symbol: ubiG
gene_biotype: protein_coding
description:
  3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.


ensembl_gene_id: RA29_09290
symbol: KIC49824.1
gene_biotype: protein_coding
description:
  Proline iminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S33 family.


ensembl_gene_id: RA29_09300
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation protein RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: RA29_09305
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription elongation factor NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: RA29_09310
symbol: KIC49828.1
gene_biotype: protein_coding
description:
  50S ribosomal protein L7; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09315
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: RA29_09320
symbol: KIC49830.1
gene_biotype: protein_coding
description:
  NTP pyrophosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09325
symbol: argJ
gene_biotype: protein_coding
description:
  N-acetylglutamate synthase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: RA29_09335
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family.


ensembl_gene_id: RA29_09350
symbol: KIC49836.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0758 family.


ensembl_gene_id: RA29_09355
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: RA29_09365
symbol: KIC49839.1
gene_biotype: protein_coding
description:
  Dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09380
symbol: cysQ
gene_biotype: protein_coding
description:
  3'-5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.


ensembl_gene_id: RA29_09385
symbol: KIC49842.1
gene_biotype: protein_coding
description:
  3-deoxy-manno-octulosonate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09395
symbol: KIC50186.1
gene_biotype: protein_coding
description:
  UTP--glucose-1-phosphate uridylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09400
symbol: KIC49844.1
gene_biotype: protein_coding
description:
  UDP-glucose 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family.


ensembl_gene_id: RA29_09410
symbol: KIC49846.1
gene_biotype: protein_coding
description:
  Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09420
symbol: KIC49848.1
gene_biotype: protein_coding
description:
  Nodulation protein NodH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09425
symbol: KIC49849.1
gene_biotype: protein_coding
description:
  PTS lactose transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09430
symbol: hpf
gene_biotype: protein_coding
description:
  Ribose ABC transporter permease; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: RA29_09445
symbol: KIC49853.1
gene_biotype: protein_coding
description:
  Organic solvent tolerance protein OstA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09455
symbol: KIC49855.1
gene_biotype: protein_coding
description:
  D-arabinose 5-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily.


ensembl_gene_id: RA29_09460
symbol: KIC49856.1
gene_biotype: protein_coding
description:
  3'-5' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09470
symbol: KIC49858.1
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase; Catalyzes the ring cleavage reaction in phenylacetate degradation and the formation of 3-hydroxyacyl-CoA from crotonyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09485
symbol: KIC50187.1
gene_biotype: protein_coding
description:
  phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09495
symbol: paaB
gene_biotype: protein_coding
description:
  phenylacetate-CoA oxygenase; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09505
symbol: KIC49863.1
gene_biotype: protein_coding
description:
  Catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: RA29_09515
symbol: KIC49865.1
gene_biotype: protein_coding
description:
  Molecular chaperone GroES; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09520
symbol: KIC49866.1
gene_biotype: protein_coding
description:
  Catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09525
symbol: KIC49867.1
gene_biotype: protein_coding
description:
  Citrate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09535
symbol: KIC49868.1
gene_biotype: protein_coding
description:
  Tripartite tricarboxylate transporter TctA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09580
symbol: ilvD
gene_biotype: protein_coding
description:
  Dihydroxy-acid dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IlvD/Edd family.


ensembl_gene_id: RA29_09590
symbol: KIC49877.1
gene_biotype: protein_coding
description:
  CAAX protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09595
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxyl transferase; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: RA29_09600
symbol: KIC49879.1
gene_biotype: protein_coding
description:
  Folylpolyglutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: RA29_09625
symbol: KIC49881.1
gene_biotype: protein_coding
description:
  Ornithine cyclodeaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09635
symbol: KIC49883.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0178 family.


ensembl_gene_id: RA29_09645
symbol: KIC49885.1
gene_biotype: protein_coding
description:
  Malate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09655
symbol: KIC49887.1
gene_biotype: protein_coding
description:
  DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09665
symbol: KIC49889.1
gene_biotype: protein_coding
description:
  Biotin biosynthesis protein BioY; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09675
symbol: KIC49891.1
gene_biotype: protein_coding
description:
  phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).


ensembl_gene_id: RA29_09680
symbol: KIC49892.1
gene_biotype: protein_coding
description:
  Phenylacetic acid degradation protein PaaD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09695
symbol: KIC49895.1
gene_biotype: protein_coding
description:
  Cytochrome C oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M17 family.


ensembl_gene_id: RA29_09710
symbol: KIC49897.1
gene_biotype: protein_coding
description:
  Nitrogen regulatory protein P-II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09730
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: RA29_09740
symbol: KIC50195.1
gene_biotype: protein_coding
description:
  Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09745
symbol: KIC49902.1
gene_biotype: protein_coding
description:
  Catalyzes the retro-aldol cleavage of 2-keto-3-deoxy-L-rhamnonate to pyruvate and lactaldehyde; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family.


ensembl_gene_id: RA29_09770
symbol: KIC49907.1
gene_biotype: protein_coding
description:
  Modification methylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the N(4)/N(6)-methyltransferase family.


ensembl_gene_id: RA29_09790
symbol: KIC49911.1
gene_biotype: protein_coding
description:
  Zn-ribbon-containing, possibly RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09805
symbol: KIC49913.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: RA29_09820
symbol: KIC49916.1
gene_biotype: protein_coding
description:
  Modulator protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09835
symbol: KIC49917.1
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: RA29_09850
symbol: KIC49919.1
gene_biotype: protein_coding
description:
  NAD(FAD)-utilizing dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09875
symbol: leuS
gene_biotype: protein_coding
description:
  leucyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: RA29_09890
symbol: KIC49927.1
gene_biotype: protein_coding
description:
  Pyridoxal phosphate biosynthesis protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: RA29_09900
symbol: ribA
gene_biotype: protein_coding
description:
  GTP cyclohydrolase; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: RA29_09915
symbol: KIC49931.1
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09930
symbol: KIC49933.1
gene_biotype: protein_coding
description:
  ATP-dependent protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09935
symbol: KIC49934.1
gene_biotype: protein_coding
description:
  2-octaprenyl-6-methoxyphenyl hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09940
symbol: KIC49935.1
gene_biotype: protein_coding
description:
  Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the amidase family.


ensembl_gene_id: RA29_09945
symbol: KIC49936.1
gene_biotype: protein_coding
description:
  Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09950
symbol: KIC49937.1
gene_biotype: protein_coding
description:
  Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09955
symbol: KIC50201.1
gene_biotype: protein_coding
description:
  Cell envelope biogenesis protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: RA29_09975
symbol: KIC49941.1
gene_biotype: protein_coding
description:
  Gamma-glutamyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09980
symbol: KIC50202.1
gene_biotype: protein_coding
description:
  Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_09985
symbol: KIC49942.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family.


ensembl_gene_id: RA29_10015
symbol: KIC49948.1
gene_biotype: protein_coding
description:
  Dimethylglycine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.


ensembl_gene_id: RA29_10020
symbol: KIC49949.1
gene_biotype: protein_coding
description:
  Homocysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10040
symbol: KIC50203.1
gene_biotype: protein_coding
description:
  Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: RA29_10045
symbol: KIC49953.1
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10050
symbol: KIC50204.1
gene_biotype: protein_coding
description:
  Peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10060
symbol: pnp
gene_biotype: protein_coding
description:
  Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: RA29_10070
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: RA29_10090
symbol: truB
gene_biotype: protein_coding
description:
  Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: RA29_10105
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: RA29_10110
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: RA29_10115
symbol: KIC50205.1
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10125
symbol: KIC49966.1
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: RA29_10130
symbol: KIC49967.1
gene_biotype: protein_coding
description:
  Heparinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10135
symbol: purH
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazolecarboxamide formyltransferase; Involved in de novo purine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10140
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: RA29_10150
symbol: KIC49971.1
gene_biotype: protein_coding
description:
  Zinc protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M16 family.


ensembl_gene_id: RA29_10155
symbol: KIC50206.1
gene_biotype: protein_coding
description:
  Zinc protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10160
symbol: KIC49972.1
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: RA29_10165
symbol: KIC49973.1
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate.


ensembl_gene_id: RA29_10185
symbol: KIC50207.1
gene_biotype: protein_coding
description:
  Manganese transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: RA29_10190
symbol: KIC49977.1
gene_biotype: protein_coding
description:
  Manganese ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10195
symbol: KIC49978.1
gene_biotype: protein_coding
description:
  Zinc ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10210
symbol: KIC49981.1
gene_biotype: protein_coding
description:
  5-hydroxyisourate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.


ensembl_gene_id: RA29_10215
symbol: KIC49982.1
gene_biotype: protein_coding
description:
  Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10225
symbol: KIC49984.1
gene_biotype: protein_coding
description:
  Ureidoglycolate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10235
symbol: KIC49986.1
gene_biotype: protein_coding
description:
  ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10290
symbol: KIC49996.1
gene_biotype: protein_coding
description:
  Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10295
symbol: KIC49997.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions.


ensembl_gene_id: RA29_10300
symbol: KIC49998.1
gene_biotype: protein_coding
description:
  Cytochrome D ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10305
symbol: KIC49999.1
gene_biotype: protein_coding
description:
  Cytochrome BD ubiquinol oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10310
symbol: KIC50000.1
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10315
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: RA29_10320
symbol: KIC50002.1
gene_biotype: protein_coding
description:
  Recombinase RmuC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10335
symbol: KIC50209.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor RpoE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: RA29_10340
symbol: KIC50210.1
gene_biotype: protein_coding
description:
  Cyclopropane-fatty-acyl-phospholipid synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10350
symbol: KIC50005.1
gene_biotype: protein_coding
description:
  Sugar:cation symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10360
symbol: KIC50007.1
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10370
symbol: KIC50009.1
gene_biotype: protein_coding
description:
  Saccharopine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10385
symbol: KIC50012.1
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10400
symbol: KIC50013.1
gene_biotype: protein_coding
description:
  Allantoate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10420
symbol: KIC50017.1
gene_biotype: protein_coding
description:
  Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10455
symbol: KIC50024.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10470
symbol: KIC50213.1
gene_biotype: protein_coding
description:
  AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10485
symbol: KIC50027.1
gene_biotype: protein_coding
description:
  Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10495
symbol: KIC50029.1
gene_biotype: protein_coding
description:
  S-transferase; YghU; B2989; one of eight putative glutathione transferase proteins from E. coli; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10505
symbol: KIC50031.1
gene_biotype: protein_coding
description:
  Sodium dependent bicarbonate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10510
symbol: rpmJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L36; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL36 family.


ensembl_gene_id: RA29_10525
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: RA29_10535
symbol: KIC50035.1
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP).


ensembl_gene_id: RA29_10545
symbol: clpB
gene_biotype: protein_coding
description:
  ATPase AAA; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: RA29_10560
symbol: KIC50038.1
gene_biotype: protein_coding
description:
  Nex18 symbiotically induced protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10565
symbol: KIC50215.1
gene_biotype: protein_coding
description:
  Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate synthase family.


ensembl_gene_id: RA29_10570
symbol: msrP
gene_biotype: protein_coding
description:
  Sulfoxide reductase catalytic subunit YedY; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to re [...]


ensembl_gene_id: RA29_10580
symbol: msrQ
gene_biotype: protein_coding
description:
  Sulfite oxidase; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quin [...]


ensembl_gene_id: RA29_10615
symbol: KIC50042.1
gene_biotype: protein_coding
description:
  Cytochrome C biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10635
symbol: katG
gene_biotype: protein_coding
description:
  Peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.


ensembl_gene_id: RA29_10640
symbol: KIC50046.1
gene_biotype: protein_coding
description:
  Protocatechuate 3,4-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10650
symbol: KIC50217.1
gene_biotype: protein_coding
description:
  4-carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10655
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: RA29_10665
symbol: KIC50049.1
gene_biotype: protein_coding
description:
  Twin-arginine translocation pathway signal; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10680
symbol: KIC50051.1
gene_biotype: protein_coding
description:
  methylmalonyl-CoA epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10720
symbol: KIC50220.1
gene_biotype: protein_coding
description:
  Chlorohydrolase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.


ensembl_gene_id: RA29_10750
symbol: KIC50062.1
gene_biotype: protein_coding
description:
  Nucleoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10760
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: RA29_10765
symbol: KIC50221.1
gene_biotype: protein_coding
description:
  Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10770
symbol: murJ
gene_biotype: protein_coding
description:
  Multidrug transporter MurJ; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: RA29_10780
symbol: KIC50066.1
gene_biotype: protein_coding
description:
  Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10785
symbol: glgB
gene_biotype: protein_coding
description:
  Glycogen branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: RA29_10790
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: RA29_10810
symbol: glnD
gene_biotype: protein_coding
description:
  protein-PII uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.


ensembl_gene_id: RA29_10820
symbol: rsmI
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: RA29_10825
symbol: KIC50222.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0102 family.


ensembl_gene_id: RA29_10830
symbol: gshB
gene_biotype: protein_coding
description:
  Glutathione synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic GSH synthase family.


ensembl_gene_id: RA29_10855
symbol: KIC50079.1
gene_biotype: protein_coding
description:
  Adenosylcobinamide kinase; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate.


ensembl_gene_id: RA29_10860
symbol: KIC50080.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma 70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family.


ensembl_gene_id: RA29_10870
symbol: KIC50082.1
gene_biotype: protein_coding
description:
  Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: RA29_10875
symbol: dut
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: RA29_10880
symbol: KIC50084.1
gene_biotype: protein_coding
description:
  Molybdopterin biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10885
symbol: KIC50085.1
gene_biotype: protein_coding
description:
  Peptidase M3; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10895
symbol: KIC50086.1
gene_biotype: protein_coding
description:
  Hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10910
symbol: mrdB
gene_biotype: protein_coding
description:
  Cell wall shape-determining protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: RA29_10925
symbol: KIC50092.1
gene_biotype: protein_coding
description:
  Rod shape-determining protein MreC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10930
symbol: KIC50093.1
gene_biotype: protein_coding
description:
  Rod shape-determining protein MreB; Functions in MreBCD complex in some organisms; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10940
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: RA29_10945
symbol: KIC50096.1
gene_biotype: protein_coding
description:
  C factor, cell signaling protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10950
symbol: KIC50097.1
gene_biotype: protein_coding
description:
  Deoxyribodipyrimidine photolyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10965
symbol: KIC50100.1
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_10970
symbol: nadE
gene_biotype: protein_coding
description:
  NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: RA29_10985
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: RA29_11035
symbol: KIC50113.1
gene_biotype: protein_coding
description:
  Dihydropyrimidine dehydrogenase; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11045
symbol: KIC50115.1
gene_biotype: protein_coding
description:
  Allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11055
symbol: KIC50117.1
gene_biotype: protein_coding
description:
  Dihydropyrimidinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11065
symbol: KIC50118.1
gene_biotype: protein_coding
description:
  Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11115
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: RA29_11120
symbol: KIC50127.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11125
symbol: KIC50128.1
gene_biotype: protein_coding
description:
  Amino acid dehydrogenase; Catalyzes the oxidative deamination of D-amino acids; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11140
symbol: KIC50131.1
gene_biotype: protein_coding
description:
  2-dehydro-3-deoxyphosphooctonate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11145
symbol: lysK
gene_biotype: protein_coding
description:
  lysine--tRNA ligase; Class I; LysRS1; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri this enzyme charges both tRNA molecules for lysine that exist in this organism (but the tRNALysUUU very poorly) and in the presence of LysRS2 can charge tRNAPyl with lysine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: RA29_11150
symbol: KIC50225.1
gene_biotype: protein_coding
description:
  Benzoate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11190
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: RA29_11200
symbol: KIC50140.1
gene_biotype: protein_coding
description:
  ETC complex I subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11240
symbol: KIC48353.1
gene_biotype: protein_coding
description:
  ATP-dependent DNA ligase; Catalyzes the ATP-dependent formation of a phosphodiester at the site of a single strand break in duplex DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11245
symbol: KIC48354.1
gene_biotype: protein_coding
description:
  mRNA 3'-end processing factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11255
symbol: KIC48356.1
gene_biotype: protein_coding
description:
  Sterol carrier family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11265
symbol: KIC48358.1
gene_biotype: protein_coding
description:
  Disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11270
symbol: KIC48359.1
gene_biotype: protein_coding
description:
  tRNA synthetase RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11275
symbol: KIC48360.1
gene_biotype: protein_coding
description:
  Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: RA29_11280
symbol: KIC48361.1
gene_biotype: protein_coding
description:
  CarD family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11285
symbol: cobS
gene_biotype: protein_coding
description:
  Hypothetical protein; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: RA29_11290
symbol: cobT
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: RA29_11295
symbol: KIC48363.1
gene_biotype: protein_coding
description:
  Potassium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11305
symbol: KIC48365.1
gene_biotype: protein_coding
description:
  4-hydroxyphenylpyruvate dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11320
symbol: KIC48368.1
gene_biotype: protein_coding
description:
  O-acetylhomoserine aminocarboxypropyltransferase; Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11390
symbol: KIC48378.1
gene_biotype: protein_coding
description:
  Glycine/betaine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11420
symbol: KIC49178.1
gene_biotype: protein_coding
description:
  5,10-methylene tetrahydromethanopterin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11475
symbol: KIC49180.1
gene_biotype: protein_coding
description:
  DNA invertase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11490
symbol: KIC48393.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.


ensembl_gene_id: RA29_11495
symbol: KIC48394.1
gene_biotype: protein_coding
description:
  RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: RA29_11505
symbol: KIC49181.1
gene_biotype: protein_coding
description:
  CoA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11515
symbol: KIC48397.1
gene_biotype: protein_coding
description:
  Imidazoleglycerol-phosphate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11520
symbol: hisA
gene_biotype: protein_coding
description:
  Catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-hosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11530
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: RA29_11535
symbol: hisE
gene_biotype: protein_coding
description:
  phosphoribosyl-ATP pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11540
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: RA29_11570
symbol: KIC48405.1
gene_biotype: protein_coding
description:
  Extradiol dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11585
symbol: KIC49183.1
gene_biotype: protein_coding
description:
  Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.


ensembl_gene_id: RA29_11595
symbol: KIC49184.1
gene_biotype: protein_coding
description:
  Alpha-hydroxy acid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11605
symbol: KIC48409.1
gene_biotype: protein_coding
description:
  DNA helicase II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11625
symbol: KIC49186.1
gene_biotype: protein_coding
description:
  Sodium:proton antiporter; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: RA29_11635
symbol: mraZ
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MraZ family.


ensembl_gene_id: RA29_11640
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: RA29_11645
symbol: KIC48414.1
gene_biotype: protein_coding
description:
  Cell division protein FtsL; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11650
symbol: KIC48415.1
gene_biotype: protein_coding
description:
  Cell division protein FtsI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11655
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: RA29_11660
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: RA29_11665
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: RA29_11670
symbol: KIC48419.1
gene_biotype: protein_coding
description:
  20-beta-hydroxysteroid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: RA29_11675
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: RA29_11690
symbol: KIC48422.1
gene_biotype: protein_coding
description:
  Thioredoxin peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11695
symbol: KIC48423.1
gene_biotype: protein_coding
description:
  Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.


ensembl_gene_id: RA29_11700
symbol: murG
gene_biotype: protein_coding
description:
  UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: RA29_11715
symbol: KIC48427.1
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramate--alanine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11735
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: RA29_11740
symbol: ftsQ
gene_biotype: protein_coding
description:
  Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.


ensembl_gene_id: RA29_11745
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: RA29_11750
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: RA29_11755
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: RA29_11760
symbol: bamD
gene_biotype: protein_coding
description:
  Competence protein ComL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: RA29_11770
symbol: KIC48436.1
gene_biotype: protein_coding
description:
  Voltage-gated chloride channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11780
symbol: KIC48438.1
gene_biotype: protein_coding
description:
  X-Pro aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11785
symbol: KIC48439.1
gene_biotype: protein_coding
description:
  Cobalt chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11790
symbol: KIC48440.1
gene_biotype: protein_coding
description:
  Aspartate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11795
symbol: KIC48441.1
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CobS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11805
symbol: KIC48443.1
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11810
symbol: KIC49190.1
gene_biotype: protein_coding
description:
  BolA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BolA/IbaG family.


ensembl_gene_id: RA29_11830
symbol: gatB
gene_biotype: protein_coding
description:
  glutamyl-tRNA amidotransferase; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: RA29_11860
symbol: KIC48449.1
gene_biotype: protein_coding
description:
  Sugar dehydrogenase; Converts glucose to D-glucono-1,5 lactone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11900
symbol: KIC49196.1
gene_biotype: protein_coding
description:
  Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11905
symbol: KIC48454.1
gene_biotype: protein_coding
description:
  Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11910
symbol: KIC48455.1
gene_biotype: protein_coding
description:
  ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: RA29_11915
symbol: glcB
gene_biotype: protein_coding
description:
  Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.


ensembl_gene_id: RA29_11920
symbol: KIC48457.1
gene_biotype: protein_coding
description:
  Glcg protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11935
symbol: KIC49197.1
gene_biotype: protein_coding
description:
  3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: RA29_11940
symbol: KIC48459.1
gene_biotype: protein_coding
description:
  S-isoprenylcysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11945
symbol: KIC48460.1
gene_biotype: protein_coding
description:
  NAD(P) transhydrogenase subunit alpha; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the AlaDH/PNT family.


ensembl_gene_id: RA29_11950
symbol: pntB
gene_biotype: protein_coding
description:
  Pyridine nucleotide transhydrogenase; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.


ensembl_gene_id: RA29_11970
symbol: KIC48463.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_11985
symbol: KIC48465.1
gene_biotype: protein_coding
description:
  Glutathione ABC transporter ATP-binding protein; With GsiBCD is involved in glutathione import; GsiA contains 2 ATP-binding domains; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: RA29_11995
symbol: KIC48466.1
gene_biotype: protein_coding
description:
  Acetylornithine deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_12000
symbol: KIC48467.1
gene_biotype: protein_coding
description:
  PTS sugar transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_12025
symbol: moaA
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: RA29_12035
symbol: KIC48472.1
gene_biotype: protein_coding
description:
  DNA alkylation repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_12040
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: RA29_12045
symbol: glmU
gene_biotype: protein_coding
description:
  Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: RA29_12065
symbol: KIC48477.1
gene_biotype: protein_coding
description:
  isovaleryl-CoA dehydrogenase; Catalyzes the formation of 3-methylbut-2-enoyl CoA from 3-methylbutanoyl CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_12085
symbol: KIC48479.1
gene_biotype: protein_coding
description:
  methylcrotonoyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_12095
symbol: KIC48481.1
gene_biotype: protein_coding
description:
  3-methylcrotonyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_12110
symbol: KIC48484.1
gene_biotype: protein_coding
description:
  hydroxymethylglutaryl-CoA lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_12120
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: RA29_12125
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: RA29_12135
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase chain 5; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: RA29_12140
symbol: KIC48489.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_12145
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: RA29_12165
symbol: KIC48494.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.


ensembl_gene_id: RA29_12185
symbol: KIC48496.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.


ensembl_gene_id: RA29_12200
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: RA29_12225
symbol: KIC48503.1
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: RA29_12235
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: RA29_12240
symbol: KIC48505.1
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_12245
symbol: KIC48506.1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase chain 13; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_12250
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: RA29_12255
symbol: KIC48508.1
gene_biotype: protein_coding
description:
  biotin--acetyl-CoA-carboxylase ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_12260
symbol: coaX
gene_biotype: protein_coding
description:
  Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: RA29_12270
symbol: KIC48511.1
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family.


ensembl_gene_id: RA29_12285
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: RA29_12330
symbol: KIC48522.1
gene_biotype: protein_coding
description:
  ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: RA29_12335
symbol: KIC48523.1
gene_biotype: protein_coding
description:
  Sodium:proline symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_12350
symbol: tatA
gene_biotype: protein_coding
description:
  Prohead protease; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: RA29_12355
symbol: tatB
gene_biotype: protein_coding
description:
  Preprotein translocase subunit TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.


ensembl_gene_id: RA29_12360
symbol: tatC
gene_biotype: protein_coding
description:
  Preprotein translocase subunit TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: RA29_12380
symbol: pcm
gene_biotype: protein_coding
description:
  protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.


ensembl_gene_id: RA29_12385
symbol: surE
gene_biotype: protein_coding
description:
  Stationary phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: RA29_12405
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: RA29_12415
symbol: KIC48536.1
gene_biotype: protein_coding
description:
  Colicin V production CvpA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_12420
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: RA29_12425
symbol: KIC49209.1
gene_biotype: protein_coding
description:
  DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_12440
symbol: KIC48540.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: RA29_12450
symbol: KIC48541.1
gene_biotype: protein_coding
description:
  DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: RA29_12455
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: RA29_12465
symbol: KIC48544.1
gene_biotype: protein_coding
description:
  Phosphoadenosine phosphosulfate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_12505
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist in  [...]


ensembl_gene_id: RA29_12540
symbol: KIC48555.1
gene_biotype: protein_coding
description:
  Indolepyruvate ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_12555
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: RA29_12560
symbol: ccmE
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein CcdA; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.


ensembl_gene_id: RA29_12570
symbol: KIC48560.1
gene_biotype: protein_coding
description:
  Carboxylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_12575
symbol: KIC48561.1
gene_biotype: protein_coding
description:
  Cytochrome c-type biogenesis protein; required for the transfer of heme to apocytochrome c; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_12600
symbol: gltA
gene_biotype: protein_coding
description:
  Type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the citrate synthase family.


ensembl_gene_id: RA29_12605
symbol: gltX-2
gene_biotype: protein_coding
description:
  glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: RA29_12615
symbol: lexA
gene_biotype: protein_coding
description:
  LexA family transcriptional regulator; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: RA29_12620
symbol: KIC48568.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MoaA; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: RA29_12625
symbol: moaC
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: RA29_12630
symbol: trpC
gene_biotype: protein_coding
description:
  Indole-3-glycerol phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TrpC family.


ensembl_gene_id: RA29_12635
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: RA29_12640
symbol: KIC48572.1
gene_biotype: protein_coding
description:
  Anthranilate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_12650
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...]


ensembl_gene_id: RA29_12665
symbol: gpt
gene_biotype: protein_coding
description:
  Xanthine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.


ensembl_gene_id: RA29_12680
symbol: pdxH
gene_biotype: protein_coding
description:
  Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).


ensembl_gene_id: RA29_12715
symbol: KIC48582.1
gene_biotype: protein_coding
description:
  Ribonucleotide-diphosphate reductase subunit alpha; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: RA29_12730
symbol: KIC48584.1
gene_biotype: protein_coding
description:
  Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the trimethylamine methyltransferase family.


ensembl_gene_id: RA29_12750
symbol: KIC48588.1
gene_biotype: protein_coding
description:
  Zinc/cadmium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_12755
symbol: cysS
gene_biotype: protein_coding
description:
  cysteinyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: RA29_12760
symbol: KIC48590.1
gene_biotype: protein_coding
description:
  Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the alpha-IPM synthase/homocitrate synthase family.


ensembl_gene_id: RA29_12765
symbol: KIC48591.1
gene_biotype: protein_coding
description:
  Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_12785
symbol: KIC48594.1
gene_biotype: protein_coding
description:
  Phospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_12820
symbol: KIC49223.1
gene_biotype: protein_coding
description:
  Heme biosynthesis protein HemY; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HesB/IscA family.


ensembl_gene_id: RA29_12825
symbol: KIC48600.1
gene_biotype: protein_coding
description:
  Deoxyguanosinetriphosphate triphosphohydrolase; dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_12830
symbol: argS
gene_biotype: protein_coding
description:
  arginyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_12840
symbol: KIC48602.1
gene_biotype: protein_coding
description:
  Beta-hexosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_12845
symbol: KIC48603.1
gene_biotype: protein_coding
description:
  Chromosome segregation protein ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: RA29_12850
symbol: KIC49225.1
gene_biotype: protein_coding
description:
  Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: RA29_12865
symbol: KIC48606.1
gene_biotype: protein_coding
description:
  2-deoxycytidine 5-triphosphate deaminase; Catalyzes the deamination of dCTP to form dUTP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_12880
symbol: ihfA
gene_biotype: protein_coding
description:
  Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: RA29_12895
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: RA29_12900
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: RA29_12905
symbol: rpmF
gene_biotype: protein_coding
description:
  50S ribosomal protein L32; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL32 family.


ensembl_gene_id: RA29_12910
symbol: KIC49226.1
gene_biotype: protein_coding
description:
  50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_12915
symbol: KIC49227.1
gene_biotype: protein_coding
description:
  SmpA/OmlA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_12920
symbol: KIC48613.1
gene_biotype: protein_coding
description:
  ornithine-acyl-ACP acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_12925
symbol: KIC48614.1
gene_biotype: protein_coding
description:
  Elongation factor 3; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_12930
symbol: KIC48615.1
gene_biotype: protein_coding
description:
  Maltose acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_12935
symbol: KIC49228.1
gene_biotype: protein_coding
description:
  3-hydroxy-2-methylbutyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: RA29_12940
symbol: mnmA
gene_biotype: protein_coding
description:
  Thiouridylase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: RA29_12955
symbol: ligA
gene_biotype: protein_coding
description:
  NAD-dependent DNA ligase LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: RA29_12960
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: RA29_12965
symbol: KIC48621.1
gene_biotype: protein_coding
description:
  Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_12970
symbol: KIC48622.1
gene_biotype: protein_coding
description:
  Nitrogen fixation protein NifU; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_12975
symbol: hisI
gene_biotype: protein_coding
description:
  phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.


ensembl_gene_id: RA29_12980
symbol: KIC48624.1
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: RA29_12985
symbol: KIC48625.1
gene_biotype: protein_coding
description:
  Methyltransferase type 11; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_12990
symbol: trmFO
gene_biotype: protein_coding
description:
  tRNA (uracil-5-)-methyltransferase; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.


ensembl_gene_id: RA29_12995
symbol: KIC48627.1
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_13025
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: RA29_13030
symbol: rpsI
gene_biotype: protein_coding
description:
  30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family.


ensembl_gene_id: RA29_13035
symbol: KIC49229.1
gene_biotype: protein_coding
description:
  2,5-dioxovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_13040
symbol: KIC48635.1
gene_biotype: protein_coding
description:
  4-hydroxythreonine-4-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PdxA family.


ensembl_gene_id: RA29_13050
symbol: KIC48637.1
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein CcdA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DapA family.


ensembl_gene_id: RA29_13055
symbol: KIC48638.1
gene_biotype: protein_coding
description:
  L-rhamnose 1-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mandelate racemase/muconate lactonizing enzyme family.


ensembl_gene_id: RA29_13105
symbol: KIC48648.1
gene_biotype: protein_coding
description:
  Gentisate 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_13110
symbol: KIC48649.1
gene_biotype: protein_coding
description:
  NADPH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_13175
symbol: KIC48657.1
gene_biotype: protein_coding
description:
  4-hydroxybenzoyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_13225
symbol: KIC48666.1
gene_biotype: protein_coding
description:
  Indolepyruvate ferredoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_13230
symbol: KIC48667.1
gene_biotype: protein_coding
description:
  Indolepyruvate oxidoreductase subunit B; Involved in the incorporation of exogenous aryl acids in the biosynthesis of aromatic amino acids: catalysis of the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_13250
symbol: KIC49232.1
gene_biotype: protein_coding
description:
  Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.


ensembl_gene_id: RA29_13255
symbol: kynA
gene_biotype: protein_coding
description:
  Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.


ensembl_gene_id: RA29_13280
symbol: KIC48671.1
gene_biotype: protein_coding
description:
  Catalyzes the conversion of salicylyl-CoA to gentisyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_13305
symbol: KIC48676.1
gene_biotype: protein_coding
description:
  2-aminobenzoate-CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_13345
symbol: metAA
gene_biotype: protein_coding
description:
  Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.


ensembl_gene_id: RA29_13365
symbol: KIC48686.1
gene_biotype: protein_coding
description:
  Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_13380
symbol: KIC48689.1
gene_biotype: protein_coding
description:
  Trimethylamine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the trimethylamine methyltransferase family.


ensembl_gene_id: RA29_13400
symbol: lipA
gene_biotype: protein_coding
description:
  Radical SAM protein; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: RA29_13410
symbol: KIC48694.1
gene_biotype: protein_coding
description:
  Catalyzes the formation of inosine monophosphate from hypoxanthine and 5-phospho-alpha-D-ribose 1-diphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: RA29_13420
symbol: KIC48696.1
gene_biotype: protein_coding
description:
  2-methylcitrate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_13425
symbol: KIC48697.1
gene_biotype: protein_coding
description:
  Ammonia channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_13430
symbol: KIC48698.1
gene_biotype: protein_coding
description:
  Damage-inducible protein CinA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.


ensembl_gene_id: RA29_13435
symbol: KIC48699.1
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphatase; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).


ensembl_gene_id: RA29_13440
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: RA29_13445
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: RA29_13450
symbol: KIC48702.1
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: RA29_13495
symbol: KIC48709.1
gene_biotype: protein_coding
description:
  Potassium transporter TrkH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_13500
symbol: hfq
gene_biotype: protein_coding
description:
  RNA chaperone Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: RA29_13505
symbol: hflX
gene_biotype: protein_coding
description:
  GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: RA29_13510
symbol: KIC48712.1
gene_biotype: protein_coding
description:
  Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: RA29_13515
symbol: KIC48713.1
gene_biotype: protein_coding
description:
  Penicillin acylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_13530
symbol: KIC48716.1
gene_biotype: protein_coding
description:
  Delta-aminolevulinic acid dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ALAD family.


ensembl_gene_id: RA29_13540
symbol: KIC49237.1
gene_biotype: protein_coding
description:
  Component of SufBCD complex; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_13545
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: RA29_13555
symbol: KIC48720.1
gene_biotype: protein_coding
description:
  Polyketide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_13560
symbol: KIC48721.1
gene_biotype: protein_coding
description:
  benzoate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_13575
symbol: KIC48724.1
gene_biotype: protein_coding
description:
  MIP family channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MIP/aquaporin (TC 1.A.8) family.


ensembl_gene_id: RA29_13585
symbol: KIC48725.1
gene_biotype: protein_coding
description:
  3-hydroxybutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_13590
symbol: KIC48726.1
gene_biotype: protein_coding
description:
  Patatin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_13600
symbol: psuG
gene_biotype: protein_coding
description:
  Pseudouridine-5'-phosphate glycosidase; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family.


ensembl_gene_id: RA29_13620
symbol: KIC48732.1
gene_biotype: protein_coding
description:
  Thiamine-phosphate pyrophosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_13625
symbol: trmJ
gene_biotype: protein_coding
description:
  RNA methyltransferase; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.


ensembl_gene_id: RA29_13630
symbol: ctaA
gene_biotype: protein_coding
description:
  Heme A synthase; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily.


ensembl_gene_id: RA29_13635
symbol: KIC48735.1
gene_biotype: protein_coding
description:
  Peptidase M32; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.


ensembl_gene_id: RA29_13640
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: RA29_13670
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: RA29_13680
symbol: pgi
gene_biotype: protein_coding
description:
  Glucose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GPI family.


ensembl_gene_id: RA29_13690
symbol: KIC48744.1
gene_biotype: protein_coding
description:
  Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_13720
symbol: KIC49240.1
gene_biotype: protein_coding
description:
  Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family.


ensembl_gene_id: RA29_13725
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: RA29_13730
symbol: KIC48750.1
gene_biotype: protein_coding
description:
  SAM-dependent methlyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: RA29_13740
symbol: KIC48751.1
gene_biotype: protein_coding
description:
  Gamma-glutamyl kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_13745
symbol: recA
gene_biotype: protein_coding
description:
  Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: RA29_13750
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: RA29_13760
symbol: KIC48754.1
gene_biotype: protein_coding
description:
  GTP-binding protein TypA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_13785
symbol: KIC48758.1
gene_biotype: protein_coding
description:
  Converts isocitrate to alpha ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the isocitrate and isopropylmalate dehydrogenases family.


ensembl_gene_id: RA29_13840
symbol: sufC
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Part of SUF system involved in inserting iron-sulfur clusters into proteins; in Escherichia coli this protein forms a complex with SufBD; the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_13845
symbol: KIC48768.1
gene_biotype: protein_coding
description:
  Fe-S cluster assembly protein SufD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_13860
symbol: KIC48771.1
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: RA29_13875
symbol: cpdB
gene_biotype: protein_coding
description:
  Periplasmic enzyme; functions during ribonucleic acid degradation; 2',3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5'-nucleotidase family.


ensembl_gene_id: RA29_13880
symbol: KIC48774.1
gene_biotype: protein_coding
description:
  Tat pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_13890
symbol: KIC48776.1
gene_biotype: protein_coding
description:
  UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: RA29_13895
symbol: KIC48777.1
gene_biotype: protein_coding
description:
  Phosphopantetheine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_13900
symbol: KIC48778.1
gene_biotype: protein_coding
description:
  beta-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: RA29_13935
symbol: KIC48784.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_13975
symbol: KIC48791.1
gene_biotype: protein_coding
description:
  3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway. Belongs to the methyltransferase superfamily. UbiG/COQ3 family.


ensembl_gene_id: RA29_14010
symbol: rplU
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: RA29_14015
symbol: rpmA
gene_biotype: protein_coding
description:
  50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL27 family.


ensembl_gene_id: RA29_14040
symbol: obgE
gene_biotype: protein_coding
description:
  GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: RA29_14045
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: RA29_14050
symbol: proA
gene_biotype: protein_coding
description:
  Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: RA29_14055
symbol: KIC48799.1
gene_biotype: protein_coding
description:
  Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14075
symbol: rpsB
gene_biotype: protein_coding
description:
  30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family.


ensembl_gene_id: RA29_14080
symbol: tsf
gene_biotype: protein_coding
description:
  Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: RA29_14100
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: RA29_14105
symbol: KIC48807.1
gene_biotype: protein_coding
description:
  Nodulation protein NodN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14115
symbol: KIC48809.1
gene_biotype: protein_coding
description:
  Phosphoglycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14120
symbol: KIC48810.1
gene_biotype: protein_coding
description:
  NADPH:quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14125
symbol: KIC48811.1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: RA29_14140
symbol: KIC48814.1
gene_biotype: protein_coding
description:
  2-nitropropane dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14170
symbol: KIC48820.1
gene_biotype: protein_coding
description:
  Mannosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14185
symbol: KIC48822.1
gene_biotype: protein_coding
description:
  acyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14205
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: RA29_14215
symbol: KIC48828.1
gene_biotype: protein_coding
description:
  ABC transporter permease; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: RA29_14220
symbol: KIC49252.1
gene_biotype: protein_coding
description:
  Phosphonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14230
symbol: KIC48830.1
gene_biotype: protein_coding
description:
  Cystathionine gamma-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14240
symbol: KIC48832.1
gene_biotype: protein_coding
description:
  Anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14260
symbol: KIC48836.1
gene_biotype: protein_coding
description:
  Phospho-2-dehydro-3-deoxyheptonate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14280
symbol: rlmE
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.


ensembl_gene_id: RA29_14295
symbol: KIC49254.1
gene_biotype: protein_coding
description:
  Methylenetetrahydrofolate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14300
symbol: KIC48842.1
gene_biotype: protein_coding
description:
  Methyltetrahydrofolate:corrinoid methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14310
symbol: KIC48844.1
gene_biotype: protein_coding
description:
  Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14315
symbol: KIC49255.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14320
symbol: KIC48845.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14325
symbol: KIC48846.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.


ensembl_gene_id: RA29_14340
symbol: cheD
gene_biotype: protein_coding
description:
  Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: RA29_14350
symbol: KIC48850.1
gene_biotype: protein_coding
description:
  Sulfopyruvate decarboxylase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14355
symbol: KIC48851.1
gene_biotype: protein_coding
description:
  Decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14360
symbol: KIC48852.1
gene_biotype: protein_coding
description:
  Sorbitol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14370
symbol: KIC49256.1
gene_biotype: protein_coding
description:
  Isocitrate dehydrogenase; NADP-specific, catalyzes the formation of 2-oxoglutarate from isocitrate or oxalosuccinate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the monomeric-type IDH family.


ensembl_gene_id: RA29_14385
symbol: KIC48856.1
gene_biotype: protein_coding
description:
  Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14410
symbol: KIC48860.1
gene_biotype: protein_coding
description:
  Ala-tRNA(Pro) hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14420
symbol: KIC48862.1
gene_biotype: protein_coding
description:
  Cysteine synthase; CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14425
symbol: KIC48863.1
gene_biotype: protein_coding
description:
  Tellurium resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14440
symbol: KIC48866.1
gene_biotype: protein_coding
description:
  Deoxyribodipyrimidine photolyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA photolyase family.


ensembl_gene_id: RA29_14460
symbol: KIC48868.1
gene_biotype: protein_coding
description:
  HIT family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14465
symbol: KIC49258.1
gene_biotype: protein_coding
description:
  acryloyl-CoA reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14470
symbol: dmdA
gene_biotype: protein_coding
description:
  Dimethyl sulfoniopropionate demethylase; DmdA; DMSP demethylase; in Silicibacter knockout of this gene results in an inability to convert DMSP to methanethiol which is restored with a cloned copy of the gene; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.


ensembl_gene_id: RA29_14495
symbol: KIC48873.1
gene_biotype: protein_coding
description:
  Selenium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14525
symbol: KIC48878.1
gene_biotype: protein_coding
description:
  Chromate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14540
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: RA29_14550
symbol: KIC48882.1
gene_biotype: protein_coding
description:
  Arylsulfate sulfotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14560
symbol: KIC48884.1
gene_biotype: protein_coding
description:
  Fructose-1,6-bisphosphate aldolase; Catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate in glycolysis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14565
symbol: KIC48885.1
gene_biotype: protein_coding
description:
  Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14575
symbol: KIC48887.1
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14580
symbol: KIC48888.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit TatB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: RA29_14585
symbol: rne
gene_biotype: protein_coding
description:
  Ribonuclease; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily.


ensembl_gene_id: RA29_14620
symbol: purC
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole-succinocarboxamide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SAICAR synthetase family.


ensembl_gene_id: RA29_14635
symbol: KIC48896.1
gene_biotype: protein_coding
description:
  Catalyzes the formation of methionine from L-homocysteine and S-adenosyl-L-methionine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14640
symbol: KIC49263.1
gene_biotype: protein_coding
description:
  DNA repair photolyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14645
symbol: KIC48897.1
gene_biotype: protein_coding
description:
  5-methyltetrahydrofolate--homocysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14655
symbol: KIC48899.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0145 family.


ensembl_gene_id: RA29_14685
symbol: KIC48905.1
gene_biotype: protein_coding
description:
  Cysteine desufuration protein SufE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14695
symbol: rnd
gene_biotype: protein_coding
description:
  Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family.


ensembl_gene_id: RA29_14700
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: RA29_14705
symbol: purM
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine cyclo-ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14770
symbol: KIC48918.1
gene_biotype: protein_coding
description:
  Aminotransferase class IV; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14785
symbol: KIC48921.1
gene_biotype: protein_coding
description:
  Competence protein TfoX; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14800
symbol: ndk
gene_biotype: protein_coding
description:
  Phosphodiesterase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: RA29_14815
symbol: KIC48927.1
gene_biotype: protein_coding
description:
  MarC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14820
symbol: KIC48928.1
gene_biotype: protein_coding
description:
  Aspartyl protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14825
symbol: KIC48929.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14830
symbol: pepA
gene_biotype: protein_coding
description:
  Aminopeptidase A; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: RA29_14845
symbol: lptD
gene_biotype: protein_coding
description:
  Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.


ensembl_gene_id: RA29_14855
symbol: pdxA
gene_biotype: protein_coding
description:
  4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).


ensembl_gene_id: RA29_14860
symbol: rsmA
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: RA29_14865
symbol: KIC49268.1
gene_biotype: protein_coding
description:
  Nucleoside triphosphate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14870
symbol: prmC
gene_biotype: protein_coding
description:
  SAM-dependent methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: RA29_14875
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: RA29_14890
symbol: KIC48939.1
gene_biotype: protein_coding
description:
  Agmatinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family.


ensembl_gene_id: RA29_14895
symbol: KIC48940.1
gene_biotype: protein_coding
description:
  Agmatinase; Catalyzes the formation of putrescine from agmatine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family.


ensembl_gene_id: RA29_14925
symbol: KIC48946.1
gene_biotype: protein_coding
description:
  Signal transduction protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14930
symbol: selO
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.


ensembl_gene_id: RA29_14945
symbol: KIC49269.1
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_14965
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: RA29_14985
symbol: anmK
gene_biotype: protein_coding
description:
  anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.


ensembl_gene_id: RA29_14990
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: RA29_14995
symbol: KIC48959.1
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: RA29_15005
symbol: lpxA
gene_biotype: protein_coding
description:
  acyl-ACP--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: RA29_15010
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-ACP dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: RA29_15020
symbol: bamA
gene_biotype: protein_coding
description:
  Outer membrane protein assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: RA29_15030
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: RA29_15035
symbol: KIC48966.1
gene_biotype: protein_coding
description:
  Phosphatidate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDS family.


ensembl_gene_id: RA29_15040
symbol: KIC48967.1
gene_biotype: protein_coding
description:
  UDP pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: RA29_15045
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: RA29_15055
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: RA29_15090
symbol: KIC48975.1
gene_biotype: protein_coding
description:
  Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: RA29_15095
symbol: KIC48976.1
gene_biotype: protein_coding
description:
  Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15100
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: RA29_15105
symbol: aroK-2
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: RA29_15120
symbol: xerD
gene_biotype: protein_coding
description:
  Recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: RA29_15125
symbol: KIC48982.1
gene_biotype: protein_coding
description:
  Diadenosine tetraphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15140
symbol: KIC48985.1
gene_biotype: protein_coding
description:
  Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.


ensembl_gene_id: RA29_15160
symbol: KIC48988.1
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2C-methyl-D-erythritol synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15165
symbol: KIC48989.1
gene_biotype: protein_coding
description:
  Type I secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15180
symbol: KIC48990.1
gene_biotype: protein_coding
description:
  Polysaccharide synthesis protein exod; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15185
symbol: KIC49274.1
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15200
symbol: KIC48993.1
gene_biotype: protein_coding
description:
  Ornithine cyclodeaminase; Catalyzes the formation of L-proline from L-ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15215
symbol: dksA
gene_biotype: protein_coding
description:
  Molecular chaperone DnaK; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.


ensembl_gene_id: RA29_15230
symbol: KIC48999.1
gene_biotype: protein_coding
description:
  ATP-dependent transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15235
symbol: KIC49000.1
gene_biotype: protein_coding
description:
  Apolipoprotein acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15270
symbol: KIC49277.1
gene_biotype: protein_coding
description:
  Glutamate-ammonia-ligase adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transd [...]


ensembl_gene_id: RA29_15290
symbol: bpt
gene_biotype: protein_coding
description:
  arginyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.


ensembl_gene_id: RA29_15305
symbol: KIC49009.1
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.


ensembl_gene_id: RA29_15325
symbol: KIC49280.1
gene_biotype: protein_coding
description:
  Acetolactate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15350
symbol: KIC49016.1
gene_biotype: protein_coding
description:
  (2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15365
symbol: KIC49019.1
gene_biotype: protein_coding
description:
  Amidase; Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15370
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: RA29_15385
symbol: KIC49023.1
gene_biotype: protein_coding
description:
  1-aminocyclopropane-1-carboxylate deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15395
symbol: KIC49025.1
gene_biotype: protein_coding
description:
  DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15400
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: RA29_15405
symbol: KIC49027.1
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15410
symbol: KIC49281.1
gene_biotype: protein_coding
description:
  Catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15450
symbol: KIC49032.1
gene_biotype: protein_coding
description:
  Pirin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pirin family.


ensembl_gene_id: RA29_15470
symbol: KIC49035.1
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphoglycerate mutase family.


ensembl_gene_id: RA29_15485
symbol: lon
gene_biotype: protein_coding
description:
  DNA-binding protein; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: RA29_15490
symbol: KIC49037.1
gene_biotype: protein_coding
description:
  3-demethylubiquinone-9 3-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15495
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: RA29_15500
symbol: KIC49283.1
gene_biotype: protein_coding
description:
  phosphoribosyl-AMP cyclohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15505
symbol: KIC49039.1
gene_biotype: protein_coding
description:
  FeS assembly SUF system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15510
symbol: KIC49284.1
gene_biotype: protein_coding
description:
  Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15520
symbol: KIC49040.1
gene_biotype: protein_coding
description:
  Fe-S cluster assembly protein HesB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HesB/IscA family.


ensembl_gene_id: RA29_15525
symbol: KIC49041.1
gene_biotype: protein_coding
description:
  TfoX-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15535
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: RA29_15575
symbol: KIC49051.1
gene_biotype: protein_coding
description:
  uroporphyrin-III methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.


ensembl_gene_id: RA29_15585
symbol: KIC49053.1
gene_biotype: protein_coding
description:
  Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15590
symbol: KIC49285.1
gene_biotype: protein_coding
description:
  Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.


ensembl_gene_id: RA29_15595
symbol: KIC49054.1
gene_biotype: protein_coding
description:
  Oxidoreductase probably; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15600
symbol: KIC49055.1
gene_biotype: protein_coding
description:
  ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15620
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: RA29_15660
symbol: KIC49065.1
gene_biotype: protein_coding
description:
  XdhC/CoxI family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15665
symbol: KIC49288.1
gene_biotype: protein_coding
description:
  ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BolA/IbaG family.


ensembl_gene_id: RA29_15675
symbol: KIC49067.1
gene_biotype: protein_coding
description:
  Glutaredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutaredoxin family. Monothiol subfamily.


ensembl_gene_id: RA29_15680
symbol: KIC49068.1
gene_biotype: protein_coding
description:
  Cell division protein ZapA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15690
symbol: KIC49290.1
gene_biotype: protein_coding
description:
  Transketolase; Catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family.


ensembl_gene_id: RA29_15705
symbol: gapA
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase; Required for glycolysis; catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: RA29_15710
symbol: KIC49072.1
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15725
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: RA29_15740
symbol: KIC49292.1
gene_biotype: protein_coding
description:
  Methylmalonate-semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15760
symbol: KIC49293.1
gene_biotype: protein_coding
description:
  3-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HIBADH-related family.


ensembl_gene_id: RA29_15775
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: RA29_15790
symbol: KIC49294.1
gene_biotype: protein_coding
description:
  E3 component of alpha keto acid dehydrogenase complexes LpdC; forms a homodimer; binds one molecule of FAD monomer; catalyzes NAD+-dependent oxidation of dihydrolipoyl cofactors that are covalently linked to the E2 component; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15800
symbol: KIC49083.1
gene_biotype: protein_coding
description:
  Major facilitator transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15805
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine tRNA ribosyltransferase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: RA29_15820
symbol: KIC49086.1
gene_biotype: protein_coding
description:
  YHS domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15835
symbol: KIC49295.1
gene_biotype: protein_coding
description:
  Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15850
symbol: KIC49091.1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: RA29_15860
symbol: pgk
gene_biotype: protein_coding
description:
  Phosphoglycerate kinase; Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphoglycerate kinase family.


ensembl_gene_id: RA29_15865
symbol: KIC49093.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: RA29_15870
symbol: KIC49094.1
gene_biotype: protein_coding
description:
  Septum formation initiator precursor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15875
symbol: pdhA
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: RA29_15880
symbol: KIC49096.1
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.


ensembl_gene_id: RA29_15885
symbol: KIC49097.1
gene_biotype: protein_coding
description:
  Branched-chain alpha-keto acid dehydrogenase subunit E2; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: RA29_15890
symbol: KIC49297.1
gene_biotype: protein_coding
description:
  Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15895
symbol: KIC49098.1
gene_biotype: protein_coding
description:
  Phage host specificity protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15905
symbol: KIC49100.1
gene_biotype: protein_coding
description:
  Phage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15910
symbol: KIC49101.1
gene_biotype: protein_coding
description:
  Glycoside hydrolase family 24; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15915
symbol: KIC49102.1
gene_biotype: protein_coding
description:
  Tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15935
symbol: KIC49106.1
gene_biotype: protein_coding
description:
  Gene transfer agent protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15950
symbol: KIC49298.1
gene_biotype: protein_coding
description:
  Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15955
symbol: KIC49109.1
gene_biotype: protein_coding
description:
  Peptidase U35; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15965
symbol: KIC49299.1
gene_biotype: protein_coding
description:
  Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_15980
symbol: mltG
gene_biotype: protein_coding
description:
  Branched-chain alpha-keto acid dehydrogenase subunit E2; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.


ensembl_gene_id: RA29_15985
symbol: KIC49113.1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: RA29_16000
symbol: KIC49116.1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: RA29_16005
symbol: KIC49301.1
gene_biotype: protein_coding
description:
  Transmembrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_16010
symbol: KIC49117.1
gene_biotype: protein_coding
description:
  ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_16015
symbol: KIC49118.1
gene_biotype: protein_coding
description:
  Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0312 family.


ensembl_gene_id: RA29_16020
symbol: KIC49119.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0312 family.


ensembl_gene_id: RA29_16035
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: RA29_16055
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: RA29_16080
symbol: KIC49124.1
gene_biotype: protein_coding
description:
  YeeE/YedE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_16090
symbol: KIC49306.1
gene_biotype: protein_coding
description:
  Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_16095
symbol: KIC49125.1
gene_biotype: protein_coding
description:
  Sulfur oxidation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_16105
symbol: KIC49126.1
gene_biotype: protein_coding
description:
  Monoheme cytochrome C SoxX; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_16110
symbol: KIC49127.1
gene_biotype: protein_coding
description:
  Sulfur oxidation protein SoxY; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RA29_16170
symbol: KIC49138.1
gene_biotype: protein_coding
description:
  soxH protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


