# geneInfo

ensembl_gene_id: LH23_10005
symbol: yaiI
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0178 family.


ensembl_gene_id: LH23_10015
symbol: aroL
gene_biotype: protein_coding
description:
  Shikimate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10020
symbol: AIR60983.1
gene_biotype: protein_coding
description:
  AroM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10025
symbol: AIR60984.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.


ensembl_gene_id: LH23_10035
symbol: mak
gene_biotype: protein_coding
description:
  Fructokinase; Catalyzes phosphorylation of fructose; cytosolic enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10040
symbol: sbcC
gene_biotype: protein_coding
description:
  Exonuclease SbcC; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SMC family. SbcC subfamily.


ensembl_gene_id: LH23_10045
symbol: sbcD_1
gene_biotype: protein_coding
description:
  Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: LH23_10050
symbol: phoB
gene_biotype: protein_coding
description:
  Transcriptional regulator PhoB; Two component response regulator for the phosphate regulon; PhoR phosphorylates PhoB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10055
symbol: phoR
gene_biotype: protein_coding
description:
  Phosphate regulon sensor protein; Membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10060
symbol: brnQ
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter substrate-binding protein; Component of the transport system for branched-chain amino acids.


ensembl_gene_id: LH23_10065
symbol: proY
gene_biotype: protein_coding
description:
  Cryptic permease that may be involved in the transport of proline across the inner membrane; in Salmonella typhimurium, the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10070
symbol: tvaI
gene_biotype: protein_coding
description:
  Maltodextrin glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10085
symbol: AIR60996.1
gene_biotype: protein_coding
description:
  Antibiotic biosynthesis monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10095
symbol: tsaA_1
gene_biotype: protein_coding
description:
  Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10100
symbol: acpH
gene_biotype: protein_coding
description:
  ACP phosphodiesterase; Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP; Belongs to the AcpH family.


ensembl_gene_id: LH23_10105
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: LH23_10110
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: LH23_10115
symbol: yajC
gene_biotype: protein_coding
description:
  Preprotein translocase subunit YajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.


ensembl_gene_id: LH23_10120
symbol: secD
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: LH23_10125
symbol: secF_2
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10130
symbol: AIR61005.1
gene_biotype: protein_coding
description:
  Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10140
symbol: tsx
gene_biotype: protein_coding
description:
  Nucleoside-specific channel-forming protein Tsx; Receptor of phage T6 and colicin K; involved in the transfer of deoxyribo- and ribo-nucleotides across the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10150
symbol: nrdR
gene_biotype: protein_coding
description:
  NrdR family transcriptional regulator; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: LH23_10155
symbol: ribD
gene_biotype: protein_coding
description:
  5-amino-6-(5-phosphoribosylamino)uracil reductase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: LH23_10160
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: LH23_10165
symbol: nusB
gene_biotype: protein_coding
description:
  Transcription antiterminator NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: LH23_10170
symbol: thiL_2
gene_biotype: protein_coding
description:
  Thiamine monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: LH23_10180
symbol: dxs_1
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: LH23_10185
symbol: ispA_2
gene_biotype: protein_coding
description:
  Geranyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10190
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: LH23_10195
symbol: thiI_3
gene_biotype: protein_coding
description:
  tRNA s(4)U8 sulfurtransferase; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.


ensembl_gene_id: LH23_10200
symbol: yajL
gene_biotype: protein_coding
description:
  Oxidative-stress-resistance chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10205
symbol: panE_1
gene_biotype: protein_coding
description:
  2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.


ensembl_gene_id: LH23_10210
symbol: yajQ
gene_biotype: protein_coding
description:
  Nucleotide-binding protein; Nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0234 family.


ensembl_gene_id: LH23_10220
symbol: cyoE
gene_biotype: protein_coding
description:
  Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.


ensembl_gene_id: LH23_10225
symbol: cyoD
gene_biotype: protein_coding
description:
  Cytochrome o ubiquinol oxidase subunit IV; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10230
symbol: cyoC
gene_biotype: protein_coding
description:
  Cytochrome o ubiquinol oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10235
symbol: cyoB_2
gene_biotype: protein_coding
description:
  Cytochrome o ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: LH23_10240
symbol: cyoA
gene_biotype: protein_coding
description:
  Cytochrome o ubiquinol oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10245
symbol: hscC
gene_biotype: protein_coding
description:
  Heat shock protein 70; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10250
symbol: AIR61029.1
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10265
symbol: fccA_1
gene_biotype: protein_coding
description:
  NADH:flavin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10270
symbol: ampG
gene_biotype: protein_coding
description:
  Muropeptide transporter; In Escherichia coli this protein is a permease involved in peptidoglycan recycling; member of major facilitator superfamily; MFS; inner membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10280
symbol: bolA
gene_biotype: protein_coding
description:
  Positive transcriptional regulator of morphogenetic pathway; controlling several genes involved in oxidative stress, acid stress, heat shock, osmotic shock, and carbon-starvation stress; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BolA/IbaG family.


ensembl_gene_id: LH23_10285
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: LH23_10295
symbol: clpP
gene_biotype: protein_coding
description:
  Hypothetical protein; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: LH23_10300
symbol: clpX
gene_biotype: protein_coding
description:
  Clp protease ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: LH23_10305
symbol: lon_2
gene_biotype: protein_coding
description:
  DNA-binding protein; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: LH23_10310
symbol: hupB
gene_biotype: protein_coding
description:
  Transcriptional regulator HU subunit alpha; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: LH23_10315
symbol: ppiD
gene_biotype: protein_coding
description:
  Molecular chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10320
symbol: AIR61042.1
gene_biotype: protein_coding
description:
  Competence protein ComEA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10325
symbol: fadM_1
gene_biotype: protein_coding
description:
  Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10330
symbol: queC_1
gene_biotype: protein_coding
description:
  Queuosine biosynthesis protein QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.


ensembl_gene_id: LH23_10340
symbol: cof_1
gene_biotype: protein_coding
description:
  Thiamin pyrimidine pyrophosphate hydrolase; Catalyzes the hydrolysis of 4-amino-2-methyl-5- hydroxymethylpyrimidine pyrophosphate (HMP-PP) to 4-amino-2-methyl-5- hydroxymethylpyrimidine phosphate (HMP-P). Belongs to the HAD-like hydrolase superfamily. Cof family.


ensembl_gene_id: LH23_10345
symbol: cysK_1
gene_biotype: protein_coding
description:
  Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10365
symbol: glnK
gene_biotype: protein_coding
description:
  Nitrogen regulatory protein P-II 1; Indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10370
symbol: amtB
gene_biotype: protein_coding
description:
  Ammonium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10375
symbol: tesB
gene_biotype: protein_coding
description:
  acyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10385
symbol: ogt_1
gene_biotype: protein_coding
description:
  Cysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10390
symbol: AIR61056.1
gene_biotype: protein_coding
description:
  Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10395
symbol: lrpC
gene_biotype: protein_coding
description:
  AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10425
symbol: gdhA
gene_biotype: protein_coding
description:
  Converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: LH23_10435
symbol: cstA_2
gene_biotype: protein_coding
description:
  Carbon starvation protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10445
symbol: ilvB_2
gene_biotype: protein_coding
description:
  Acetolactate synthase catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10450
symbol: ilvN
gene_biotype: protein_coding
description:
  Acetolactate synthase 1 regulatory subunit; With IlvB catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10455
symbol: AIR61069.1
gene_biotype: protein_coding
description:
  Addiction module protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10465
symbol: lldD
gene_biotype: protein_coding
description:
  Lactate dehydrogenase; Catalyzes the conversion of L-lactate to pyruvate. Is coupled to the respiratory chain; Belongs to the FMN-dependent alpha-hydroxy acid dehydrogenase family.


ensembl_gene_id: LH23_10470
symbol: pdhR_1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Represses the lctPRD operon; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10475
symbol: lldP
gene_biotype: protein_coding
description:
  L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: LH23_10510
symbol: AIR61080.1
gene_biotype: protein_coding
description:
  DoxX family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10595
symbol: AIR61097.1
gene_biotype: protein_coding
description:
  Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10600
symbol: atzC
gene_biotype: protein_coding
description:
  Deaminase; Metallo-dependent hydrolase superfamily; deaminase with metallo-dependent hydrolase domain; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10605
symbol: uspG_1
gene_biotype: protein_coding
description:
  Universal stress protein UspG; Required for resistance to DNA-damaging agents. Belongs to the universal stress protein A family.


ensembl_gene_id: LH23_10615
symbol: fabG_1
gene_biotype: protein_coding
description:
  Sugar dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10645
symbol: caf1A_3
gene_biotype: protein_coding
description:
  Pilin outer membrane usher protein SafC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10670
symbol: AIR61112.1
gene_biotype: protein_coding
description:
  Type IV secretion protein DotU; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10675
symbol: AIR61113.1
gene_biotype: protein_coding
description:
  Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10700
symbol: AIR61118.1
gene_biotype: protein_coding
description:
  Type IV secretion protein Rhs; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10725
symbol: AIR61123.1
gene_biotype: protein_coding
description:
  EvpB family type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10770
symbol: ebgA
gene_biotype: protein_coding
description:
  beta-D-galactosidase; In Escherichia coli this is the second beta-galactosidase system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10915
symbol: folD
gene_biotype: protein_coding
description:
  Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: LH23_10920
symbol: ybcJ
gene_biotype: protein_coding
description:
  Ribosome-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10925
symbol: ptsG_2
gene_biotype: protein_coding
description:
  PTS system N-acetylglucosamine-specific transporter subunit IICB; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10940
symbol: flhA_1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10945
symbol: flhB_1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: LH23_10950
symbol: fliR-2
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: LH23_10955
symbol: fliQ-2
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: LH23_10960
symbol: fliP_2
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein flip; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10965
symbol: fliN_1
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10970
symbol: AIR61164.1
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliM; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10975
symbol: nifA
gene_biotype: protein_coding
description:
  Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10980
symbol: fliE
gene_biotype: protein_coding
description:
  Flagellar hook-basal body protein FliE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10985
symbol: fliF
gene_biotype: protein_coding
description:
  Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: LH23_10990
symbol: fliG
gene_biotype: protein_coding
description:
  One of three proteins involved in switching the direction of the flagellar rotation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_10995
symbol: fliH
gene_biotype: protein_coding
description:
  Flagellar assembly protein H; Binds to and inhibits the function of flagella specific ATPase FliI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11000
symbol: fliI
gene_biotype: protein_coding
description:
  ATP synthase; Involved in type III protein export during flagellum assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11005
symbol: fliJ-2
gene_biotype: protein_coding
description:
  Flagellar export protein FliJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11040
symbol: flgM
gene_biotype: protein_coding
description:
  Flagellar biosynthesis anti-sigma factor FlgM; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11050
symbol: flgB
gene_biotype: protein_coding
description:
  Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: LH23_11055
symbol: flgC_1
gene_biotype: protein_coding
description:
  Flagellar basal body rod protein FlgC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: LH23_11060
symbol: flgD
gene_biotype: protein_coding
description:
  Acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; Vibrio parahaemolyticus protein in this cluster is associated with lateral flagella production; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11065
symbol: flgE
gene_biotype: protein_coding
description:
  The hook connects flagellar basal body to the flagellar filament; Vibrio parahaemolyticus protein is associated with the lateral flagella; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11070
symbol: AIR61182.1
gene_biotype: protein_coding
description:
  Flagellar basal body rod protein FlgF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11075
symbol: flgG
gene_biotype: protein_coding
description:
  Makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagella; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11080
symbol: flgH
gene_biotype: protein_coding
description:
  Flagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: LH23_11085
symbol: flgI_1
gene_biotype: protein_coding
description:
  Flagellar P-ring protein FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: LH23_11090
symbol: flgJ_1
gene_biotype: protein_coding
description:
  Peptidoglycan hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11095
symbol: flgK_1
gene_biotype: protein_coding
description:
  Flagellar hook protein FlgK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11100
symbol: AIR61188.1
gene_biotype: protein_coding
description:
  Flagellar hook-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11130
symbol: fliC_1
gene_biotype: protein_coding
description:
  Flagellin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11135
symbol: hag
gene_biotype: protein_coding
description:
  Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: LH23_11145
symbol: fliS_1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11160
symbol: AIR61199.1
gene_biotype: protein_coding
description:
  Flagellar biogenesis protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: LH23_11165
symbol: fliA_1
gene_biotype: protein_coding
description:
  Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11170
symbol: motA_1
gene_biotype: protein_coding
description:
  Flagellar motor protein MotA; With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11175
symbol: motB_1
gene_biotype: protein_coding
description:
  Flagellar motor protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11190
symbol: fabF_4
gene_biotype: protein_coding
description:
  FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: LH23_11195
symbol: fabG
gene_biotype: protein_coding
description:
  3-ketoacyl-ACP reductase; Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11200
symbol: AIR61207.1
gene_biotype: protein_coding
description:
  3-hydroxy-fatty acyl-ACP dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11225
symbol: AIR61212.1
gene_biotype: protein_coding
description:
  4-hydroxybenzoyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11235
symbol: AIR61214.1
gene_biotype: protein_coding
description:
  hydroxymyristoyl-ACP dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11245
symbol: AIR61216.1
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11250
symbol: AIR61217.1
gene_biotype: protein_coding
description:
  Acyl carrier protein; Carries the fatty acid chain in fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11255
symbol: AIR61218.1
gene_biotype: protein_coding
description:
  Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11260
symbol: AIR61219.1
gene_biotype: protein_coding
description:
  Acyl-phosphate glycerol 3-phosphate acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11265
symbol: AIR61220.1
gene_biotype: protein_coding
description:
  Beta-ketoacyl synthase, N-terminal domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11270
symbol: AIR61221.1
gene_biotype: protein_coding
description:
  Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11280
symbol: rnk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase regulator; Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11295
symbol: rna
gene_biotype: protein_coding
description:
  Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RNase T2 family.


ensembl_gene_id: LH23_11300
symbol: dcuC
gene_biotype: protein_coding
description:
  Responsible for the transport of C4-dicarboxylates during anaerobic growth; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11315
symbol: AIR61229.1
gene_biotype: protein_coding
description:
  Heavy metal RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11320
symbol: cusB_1
gene_biotype: protein_coding
description:
  Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11325
symbol: cusA_1
gene_biotype: protein_coding
description:
  Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: LH23_11330
symbol: pagP
gene_biotype: protein_coding
description:
  Phospholipid:lipid A palmitoyltransferase; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors.


ensembl_gene_id: LH23_11340
symbol: crcB_1
gene_biotype: protein_coding
description:
  Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: LH23_11350
symbol: tatE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatE shares overlapping functions with TatA; Belongs to the TatA/E family. TatE subfamily.


ensembl_gene_id: LH23_11355
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: LH23_11365
symbol: lipB_2
gene_biotype: protein_coding
description:
  Lipoate--protein ligase; Lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11370
symbol: ybeD
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0250 family.


ensembl_gene_id: LH23_11375
symbol: dacA_1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5; removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family.


ensembl_gene_id: LH23_11380
symbol: rlpA
gene_biotype: protein_coding
description:
  Lipoprotein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: LH23_11385
symbol: mrdB_2
gene_biotype: protein_coding
description:
  Cell wall shape-determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.


ensembl_gene_id: LH23_11390
symbol: AIR61244.1
gene_biotype: protein_coding
description:
  Penicillin-binding protein 2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11395
symbol: rlmH
gene_biotype: protein_coding
description:
  50S rRNA methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: LH23_11400
symbol: ybeB
gene_biotype: protein_coding
description:
  Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: LH23_11410
symbol: holA
gene_biotype: protein_coding
description:
  DNA polymerase III subunit delta; Required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11415
symbol: lptE_2
gene_biotype: protein_coding
description:
  LPS biosynthesis protein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane.


ensembl_gene_id: LH23_11420
symbol: leuS
gene_biotype: protein_coding
description:
  leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; Derived by automated computational  [...]


ensembl_gene_id: LH23_11430
symbol: artP
gene_biotype: protein_coding
description:
  Arginine transporter ATP-binding subunit; With ArtMQJI transports arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11435
symbol: gltK_2
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease; With GltJLPS and GadC for glutamate and GltJLP, DctA and DcuAB for aspartate is involved in the transport of glutamate and aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11440
symbol: gltK_1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease; With GltIKL is involved in the transport of glutamate and aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11455
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein acyltransferase; Transfers the fatty acyl group on membrane lipoproteins; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11460
symbol: corC
gene_biotype: protein_coding
description:
  Magnesium/cobalt efflux protein CorC; Involved in the transport of magnesium and cobalt ions; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11465
symbol: ybeY
gene_biotype: protein_coding
description:
  Metal-binding heat shock protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: LH23_11475
symbol: miaB
gene_biotype: protein_coding
description:
  (dimethylallyl)adenosine tRNA methylthiotransferase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: LH23_11480
symbol: ubiF
gene_biotype: protein_coding
description:
  2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol; functions in the biosynthesis of ubiquinone or coenzyme Q; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11520
symbol: asnB
gene_biotype: protein_coding
description:
  Functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11525
symbol: nagD
gene_biotype: protein_coding
description:
  UMP phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11530
symbol: mlc_1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates the synthesis of glucosamine and N-acetylglucosamine by acting as a repressor of the nagEBACD operon and both a repressor and activator of the glmSU operon; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11535
symbol: nagA
gene_biotype: protein_coding
description:
  N-acetylglucosamine-6-phosphate deacetylase; Catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11540
symbol: nagB
gene_biotype: protein_coding
description:
  Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.


ensembl_gene_id: LH23_11545
symbol: ptsG_1
gene_biotype: protein_coding
description:
  PTS N-acetyl glucosamine transporter subunits IIABC; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11550
symbol: glnS
gene_biotype: protein_coding
description:
  glutamate--tRNA ligase; Catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11565
symbol: fur
gene_biotype: protein_coding
description:
  Ferric uptake regulator; Negatively regulates a number of operons that encode enzymes involved in iron transport; activated by manganese; forms a homodimer; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family.


ensembl_gene_id: LH23_11570
symbol: fldA
gene_biotype: protein_coding
description:
  Flavodoxin FldA; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family.


ensembl_gene_id: LH23_11575
symbol: AIR61272.1
gene_biotype: protein_coding
description:
  LexA regulated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11580
symbol: ybfF
gene_biotype: protein_coding
description:
  acyl-CoA esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11585
symbol: seqA_2
gene_biotype: protein_coding
description:
  Negative modulator of the initiation of chromosome replication; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11590
symbol: pgm
gene_biotype: protein_coding
description:
  Phosphoglucomutase; Catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11600
symbol: kdpE
gene_biotype: protein_coding
description:
  Response regulator in two-component regulatory system with KdpD; regulates the kdp operon involved in potassium transport; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11605
symbol: kdpD_1
gene_biotype: protein_coding
description:
  Sensor protein KdpD; Sensory histidine kinase in two-component regulatory system with KdpE; signal sensing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11615
symbol: kdpB_4
gene_biotype: protein_coding
description:
  Potassium-transporting ATPase subunit B; One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11620
symbol: kdpA
gene_biotype: protein_coding
description:
  Potassium-transporting ATPase subunit A; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane.


ensembl_gene_id: LH23_11635
symbol: phrB
gene_biotype: protein_coding
description:
  Deoxyribodipyrimidine photolyase; UV-induced DNA repair; converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers; light dependent; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA photolyase family.


ensembl_gene_id: LH23_11640
symbol: ybgI
gene_biotype: protein_coding
description:
  Metal-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11655
symbol: nei
gene_biotype: protein_coding
description:
  Endonuclease VIII; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized pyrimidines, such as thymine glycol, 5,6-dihydrouracil and 5,6-dihydrothymine. Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: LH23_11660
symbol: gltA
gene_biotype: protein_coding
description:
  Type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the citrate synthase family.


ensembl_gene_id: LH23_11665
symbol: sdhC
gene_biotype: protein_coding
description:
  Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11675
symbol: sdhA
gene_biotype: protein_coding
description:
  Part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11680
symbol: sdhB
gene_biotype: protein_coding
description:
  Part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11685
symbol: sucA
gene_biotype: protein_coding
description:
  2-oxoglutarate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11690
symbol: sucB
gene_biotype: protein_coding
description:
  Dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: LH23_11695
symbol: sucC
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase subunit beta; Catalyzes the interconversion of succinyl-CoA and succinate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11700
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: LH23_11705
symbol: cydA_1
gene_biotype: protein_coding
description:
  Cytochrome d terminal oxidase subunit 1; Part of the aerobic respiratory chain; catalyzes the ubiquinol to ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11710
symbol: cydB
gene_biotype: protein_coding
description:
  Cytochrome d ubiquinol oxidase subunit 2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11720
symbol: AIR61298.1
gene_biotype: protein_coding
description:
  Cytochrome bd biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11725
symbol: ybgC
gene_biotype: protein_coding
description:
  acyl-CoA thioesterase; Catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters; physiological role remains unknown; involved in phospholipid metabolism; part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope components; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11730
symbol: tolQ
gene_biotype: protein_coding
description:
  Colicin uptake protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. Required, with TolR, for the proton motive force-dependent activation of TolA and for TolA-Pal interaction.


ensembl_gene_id: LH23_11735
symbol: tolR
gene_biotype: protein_coding
description:
  Colicin uptake protein TolR; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. Required, with TolQ, for the proton motive force-dependent activation of TolA and for TolA-Pal interaction.


ensembl_gene_id: LH23_11740
symbol: tolA
gene_biotype: protein_coding
description:
  Inner membrane component of 7 member Tol-Pal envelope-spanning complex; involved in maintaining cell envelope integrity; utilized by colicins and filamentous phages for import; interacts with TolB, Pal, and through TolB to various outer membrane porins; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11745
symbol: tolB
gene_biotype: protein_coding
description:
  Translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. TolB occupies a key intermediary position in the Tol-Pal system because it communicates directly with both membrane-embedded components, Pal in the outer membrane and TolA in the inner membrane.


ensembl_gene_id: LH23_11750
symbol: pal
gene_biotype: protein_coding
description:
  Peptidoglycan-associated outer membrane lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: LH23_11755
symbol: ybgF
gene_biotype: protein_coding
description:
  Tol-pal system protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.


ensembl_gene_id: LH23_11775
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate; Belongs to the quinolinate synthase A family. Type 1 subfamily.


ensembl_gene_id: LH23_11785
symbol: zitB
gene_biotype: protein_coding
description:
  Zinc transporter ZitB; Involved in zinc efflux across the cytoplasmic membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11790
symbol: aroG_2
gene_biotype: protein_coding
description:
  Phospho-2-dehydro-3-deoxyheptonate aldolase; Catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11795
symbol: gpmA
gene_biotype: protein_coding
description:
  Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.


ensembl_gene_id: LH23_11805
symbol: galK
gene_biotype: protein_coding
description:
  Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.


ensembl_gene_id: LH23_11810
symbol: galT
gene_biotype: protein_coding
description:
  Galactose-1-phosphate uridylyltransferase; Catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11815
symbol: galE
gene_biotype: protein_coding
description:
  UDP-galactose-4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family.


ensembl_gene_id: LH23_11820
symbol: yjjK_1
gene_biotype: protein_coding
description:
  Molybdenum ABC transporter ATP-binding protein; Contains 2 ATP-binding cassettes; involved in the transport of molybdenum; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11825
symbol: modE_1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Represses the modABCD operon and activates the moaABCD and napFDAGHBC operons; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11830
symbol: AIR61317.1
gene_biotype: protein_coding
description:
  Aminobenzoyl-glutamate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11835
symbol: ybhT
gene_biotype: protein_coding
description:
  Membrane protein; AcrA-AcrB-AcrZ-TolC is a drug efflux protein complex with a broad substrate specificity. This protein binds to AcrB and is required for efflux of some but not all substrates, suggesting it may influence the specificity of drug export.


ensembl_gene_id: LH23_11840
symbol: modA
gene_biotype: protein_coding
description:
  Molybdate transporter; With ModCB is involved in the high-affinity transport of molybdate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11845
symbol: modB
gene_biotype: protein_coding
description:
  Part of ModCBA molybdate transporter; member of ABC superfamily; inner membrane component; regulated by repressor protein ModE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11850
symbol: modC
gene_biotype: protein_coding
description:
  Molybdate transporter ATP-binding protein; Part of the ABC transporter complex modABC involved in molybdenum import; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11855
symbol: ywpJ
gene_biotype: protein_coding
description:
  Pyridoxal phosphate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11860
symbol: pgl
gene_biotype: protein_coding
description:
  6-phosphogluconolactonase; Catalyzes the hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate.


ensembl_gene_id: LH23_11875
symbol: bioA
gene_biotype: protein_coding
description:
  Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.


ensembl_gene_id: LH23_11880
symbol: bioB_2
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism.


ensembl_gene_id: LH23_11885
symbol: bioF_1
gene_biotype: protein_coding
description:
  Catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11890
symbol: bioC_2
gene_biotype: protein_coding
description:
  Biotin biosynthesis protein BioC; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway.


ensembl_gene_id: LH23_11895
symbol: bioD
gene_biotype: protein_coding
description:
  Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. Belongs to the dethiobiotin synthetase family.


ensembl_gene_id: LH23_11905
symbol: livF_1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11915
symbol: uvrB_2
gene_biotype: protein_coding
description:
  The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11925
symbol: moaA
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein A; Together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11930
symbol: moaB
gene_biotype: protein_coding
description:
  Molybdopterin biosynthesis protein B; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family.


ensembl_gene_id: LH23_11935
symbol: moaC
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: LH23_11940
symbol: moaD
gene_biotype: protein_coding
description:
  Molybdopterin synthase small subunit; Catalyzes the conversion of molybdopterin precursor Z into molybdopterin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11945
symbol: moaE
gene_biotype: protein_coding
description:
  Molybdopterin guanine dinucleotide biosynthesis protein MoaE; Catalyzes the conversion of molybdopterin precursor Z into molybdopterin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_11950
symbol: ybhL
gene_biotype: protein_coding
description:
  Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BI1 family.


ensembl_gene_id: LH23_11985
symbol: rhlE
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase RhlE; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA.


ensembl_gene_id: LH23_11990
symbol: dus_1
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase C; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs. Belongs to the Dus family. DusC subfamily.


ensembl_gene_id: LH23_11995
symbol: AIR61349.1
gene_biotype: protein_coding
description:
  Outer membrane porin, OprD family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12000
symbol: surE_1
gene_biotype: protein_coding
description:
  5'-nucleotidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12005
symbol: bglG
gene_biotype: protein_coding
description:
  Transcription antiterminator LicT; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12010
symbol: bglF_2
gene_biotype: protein_coding
description:
  PTS beta-glucoside transporter subunit IIABC; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12050
symbol: AIR61357.1
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12070
symbol: pbpG
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine endopeptidase; Specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family.


ensembl_gene_id: LH23_12080
symbol: dld_4
gene_biotype: protein_coding
description:
  Component of the membrane-bound D-lactate oxidase, FAD-binding, NADH independent; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12085
symbol: bglX
gene_biotype: protein_coding
description:
  beta-D-glucoside glucohydrolase; Catalyzes the hydrolysis of terminal beta-D-glucosyl residues; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.


ensembl_gene_id: LH23_12090
symbol: hcpA_5
gene_biotype: protein_coding
description:
  Hcp family T6SS protein CtsH1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12105
symbol: folC_1
gene_biotype: protein_coding
description:
  Bifunctional folylpolyglutamate synthase/ dihydrofolate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12110
symbol: chqB
gene_biotype: protein_coding
description:
  Hydroxyquinol 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12115
symbol: AIR61370.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0312 family.


ensembl_gene_id: LH23_12120
symbol: otsA_2
gene_biotype: protein_coding
description:
  Alpha,alpha-trehalose-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12125
symbol: puuA_1
gene_biotype: protein_coding
description:
  Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamine synthetase family.


ensembl_gene_id: LH23_12130
symbol: AIR61373.1
gene_biotype: protein_coding
description:
  Osmoprotectant uptake system substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12135
symbol: yehY_1
gene_biotype: protein_coding
description:
  Osmoprotectant uptake system permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12160
symbol: AIR61379.1
gene_biotype: protein_coding
description:
  50S ribosomal protein L16 arginine hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12165
symbol: AIR61380.1
gene_biotype: protein_coding
description:
  Type III effector protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12170
symbol: AIR61381.1
gene_biotype: protein_coding
description:
  DspF/AvrF protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12190
symbol: AIR61385.1
gene_biotype: protein_coding
description:
  Transglycosylase SLT domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12195
symbol: dctD
gene_biotype: protein_coding
description:
  ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12205
symbol: AIR61388.1
gene_biotype: protein_coding
description:
  Type III secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12210
symbol: prgK
gene_biotype: protein_coding
description:
  Type III secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12215
symbol: AIR61390.1
gene_biotype: protein_coding
description:
  Type III secretion protein HrpD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12220
symbol: AIR61391.1
gene_biotype: protein_coding
description:
  Type III secretion protein HrpE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12225
symbol: AIR61392.1
gene_biotype: protein_coding
description:
  Type III secretion protein HrpF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12230
symbol: pilQ_1
gene_biotype: protein_coding
description:
  Secretin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial secretin family.


ensembl_gene_id: LH23_12235
symbol: AIR61394.1
gene_biotype: protein_coding
description:
  Type III secretion protein HrpT; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12255
symbol: fliQ_1
gene_biotype: protein_coding
description:
  Type III secretory protein EscS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12260
symbol: ssaR
gene_biotype: protein_coding
description:
  Type III secretion system protein SsaR; Part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12265
symbol: hrcQb
gene_biotype: protein_coding
description:
  Protein HrcQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12285
symbol: AIR61404.1
gene_biotype: protein_coding
description:
  Type III secretion protein HrpQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12290
symbol: ssaV
gene_biotype: protein_coding
description:
  Type III secretion protein HrpI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12295
symbol: AIR61406.1
gene_biotype: protein_coding
description:
  Type III secretion regulator YopN/LcrE/InvE/MxiC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12300
symbol: AIR61407.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family.


ensembl_gene_id: LH23_12330
symbol: AIR61412.1
gene_biotype: protein_coding
description:
  Type III secretion chaperone CesT; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12335
symbol: dinG
gene_biotype: protein_coding
description:
  Helicase involved in DNA repair and perhaps also replication; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12355
symbol: AIR61417.1
gene_biotype: protein_coding
description:
  Leucyl aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12360
symbol: AIR61418.1
gene_biotype: protein_coding
description:
  N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12365
symbol: gmuC_1
gene_biotype: protein_coding
description:
  PTS lactose transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12375
symbol: AIR61421.1
gene_biotype: protein_coding
description:
  Asp/Glu/hydantoin racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12385
symbol: glnQ
gene_biotype: protein_coding
description:
  Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12390
symbol: glnP
gene_biotype: protein_coding
description:
  Similar to permease component of ABC transporters; mutations impair ability of Escherichia coli to transport and utilize glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12395
symbol: glnH
gene_biotype: protein_coding
description:
  Glutamine ABC transporter substrate-bindnig protein; Similar to periplasmic-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: LH23_12400
symbol: dps
gene_biotype: protein_coding
description:
  Binds DNA in a non-sequence-specific manner and is abundant during stationary phase; forms a DNA-protein crystal that protects DNA from damage; required for normal starvation response and long-term stationary viability; forms a homododecameric complex and sequesters iron which provides protection against oxidative damage; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family.


ensembl_gene_id: LH23_12410
symbol: ompX
gene_biotype: protein_coding
description:
  Membrane protein; OmpX; involved in cell adhesion; forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface; mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12420
symbol: AIR61430.1
gene_biotype: protein_coding
description:
  Small protein MntS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12425
symbol: mntR
gene_biotype: protein_coding
description:
  Transcriptional regulator that represses the manganese transporter MntH when manganese is present; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12445
symbol: ybjI_1
gene_biotype: protein_coding
description:
  Sugar phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12470
symbol: grxA_2
gene_biotype: protein_coding
description:
  Glutaredoxin; Functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase; also involved in reducing some disulfides in a coupled system with glutathione reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12475
symbol: AIR61441.1
gene_biotype: protein_coding
description:
  Hypothetical protein; YbjC; located in the same operon as the nfsA gene; member of the soxRS regulon which mediates in part the increased levels of superoxide in response to oxidative stress; induced by paraquat; regulated by SoxS; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12480
symbol: nfsA
gene_biotype: protein_coding
description:
  NADPH-dependent; oxygen-insensitive; catalyzes the reduction of nitroaromatic compounds; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flavin oxidoreductase frp family.


ensembl_gene_id: LH23_12485
symbol: AIR61443.1
gene_biotype: protein_coding
description:
  Purine nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12490
symbol: AIR61444.1
gene_biotype: protein_coding
description:
  Nucleoside permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12500
symbol: lysX
gene_biotype: protein_coding
description:
  Ribosomal protein S6 modification protein; Responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RimK family.


ensembl_gene_id: LH23_12510
symbol: potF
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.


ensembl_gene_id: LH23_12515
symbol: potG
gene_biotype: protein_coding
description:
  Putrescine transporter ATP-binding subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: LH23_12520
symbol: potH_1
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12535
symbol: rumB
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Catalyzes the formation of 5-methyl-uridine at position 747 (m5U747) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmC subfamily.


ensembl_gene_id: LH23_12540
symbol: artJ
gene_biotype: protein_coding
description:
  Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: LH23_12545
symbol: artM
gene_biotype: protein_coding
description:
  Arginine transporter permease subunit ArtM; With ArtPQJI acts to transport arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12550
symbol: artQ_1
gene_biotype: protein_coding
description:
  Arginine transporter permease subunit ArtQ; With ArtPMJI transports arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12560
symbol: artP-2
gene_biotype: protein_coding
description:
  Arginine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12565
symbol: ybjP
gene_biotype: protein_coding
description:
  Lipoprotein; Induced during stationary phase and by acivicin (a glutamine analog); regulated by Lrp and RpoS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12570
symbol: ybjQ
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0145 family.


ensembl_gene_id: LH23_12575
symbol: amiD
gene_biotype: protein_coding
description:
  N-acetylmuramoyl-L-alanine amidase amid; Catalyzes the cleavage of the bond between muamic acid and l-alanine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12590
symbol: ltaE
gene_biotype: protein_coding
description:
  Threonine aldolase; Low- specificity; catalyzes the formation of acetaldehyde and glycine from L-threonine; acts on L-threonine, L-allo-threonine, L-threo-phenylserine, and L-erythro-phenylserine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12595
symbol: poxB_2
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase; Catalyzes the formation of acetate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12605
symbol: hcr
gene_biotype: protein_coding
description:
  HCP oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12610
symbol: hcp_1
gene_biotype: protein_coding
description:
  Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O; Belongs to the HCP family.


ensembl_gene_id: LH23_12620
symbol: aqpZ
gene_biotype: protein_coding
description:
  Porin; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family.


ensembl_gene_id: LH23_12635
symbol: macA_3
gene_biotype: protein_coding
description:
  Confers macrolide resistance via active drug efflux; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12640
symbol: macB_4
gene_biotype: protein_coding
description:
  Macrolide transporter; With MacA is involved in the export of macrolide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12645
symbol: cspD
gene_biotype: protein_coding
description:
  Stationary phase/starvation inducible regulatory protein CspD; Inhibits DNA replication at both initiation and elongation steps; stationary phase and starvation inducible; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12650
symbol: clpS
gene_biotype: protein_coding
description:
  Clp protease ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: LH23_12655
symbol: clpA
gene_biotype: protein_coding
description:
  Clp protease ClpX; ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease; directs protease to specific substrates; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpA/ClpB family.


ensembl_gene_id: LH23_12660
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: LH23_12665
symbol: aat
gene_biotype: protein_coding
description:
  leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: LH23_12670
symbol: msbA_4
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease; In Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12680
symbol: trxB
gene_biotype: protein_coding
description:
  Thioredoxin reductase; Catalyzes the transfer of electrons from NADPH to thioredoxin; FAD/NAD(P) binding; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12685
symbol: lrp_1
gene_biotype: protein_coding
description:
  Leucine-responsive transcriptional regulator; Mediates a global response to leucine; acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12690
symbol: ftsK_2
gene_biotype: protein_coding
description:
  Cell division protein FtsK; DNA-binding membrane protein required for chromosome resolution and partitioning; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FtsK/SpoIIIE/SftA family.


ensembl_gene_id: LH23_12695
symbol: lolA
gene_biotype: protein_coding
description:
  Lipoprotein chaperone; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: LH23_12700
symbol: rarA
gene_biotype: protein_coding
description:
  Recombination factor protein RarA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12705
symbol: serS_2
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12710
symbol: dmsA_3
gene_biotype: protein_coding
description:
  Dimethyl sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12715
symbol: AIR61489.1
gene_biotype: protein_coding
description:
  Dimethyl sulfoxide reductase; Oxidoreductase, Fe-S subunit; terminal electron transfer protein for the reduction of DMSO; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12730
symbol: pflA
gene_biotype: protein_coding
description:
  Activates pyruvate formate-lyase 1 under anaerobic conditions; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12740
symbol: focA
gene_biotype: protein_coding
description:
  Formate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12745
symbol: AIR61495.1
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase accessory factor YcaO; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12750
symbol: serC
gene_biotype: protein_coding
description:
  3-phosphoserine/phosphohydroxythreonine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.


ensembl_gene_id: LH23_12755
symbol: aroA_1
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: LH23_12760
symbol: cmk
gene_biotype: protein_coding
description:
  Cytidylate kinase; Catalyzes the formation of (d)CDP from ATP and (d)CMP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12765
symbol: rpsA
gene_biotype: protein_coding
description:
  30S ribosomal protein S1; In Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12770
symbol: ihfB
gene_biotype: protein_coding
description:
  Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: LH23_12775
symbol: AIR61501.1
gene_biotype: protein_coding
description:
  Competence protein ComEC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12780
symbol: msbA_3
gene_biotype: protein_coding
description:
  Lipid transporter ATP-binding/permease; Involved in the transport of lipid A across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12785
symbol: lpxK
gene_biotype: protein_coding
description:
  Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: LH23_12795
symbol: ycaR
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0434 family.


ensembl_gene_id: LH23_12800
symbol: kdsB_1
gene_biotype: protein_coding
description:
  3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: LH23_12815
symbol: smtA
gene_biotype: protein_coding
description:
  SAM-dependent methyltransferase; Catalyzes the methylation of 5-carboxymethoxyuridine (cmo5U) to form 5-methoxycarbonylmethoxyuridine (mcmo5U) at position 34 in tRNAs; Belongs to the class I-like SAM-binding methyltransferase superfamily. CmoM family.


ensembl_gene_id: LH23_12820
symbol: mukF
gene_biotype: protein_coding
description:
  Condesin subunit F; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity.


ensembl_gene_id: LH23_12825
symbol: mukE
gene_biotype: protein_coding
description:
  Condesin subunit E; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF.


ensembl_gene_id: LH23_12830
symbol: mukB
gene_biotype: protein_coding
description:
  Cell division protein MukB; SMC (structural maintenance of chromosomes) family of proteins; involved in chromosome condensatin and partitioning; forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ; mutations result in cell division defects; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12835
symbol: AIR61513.1
gene_biotype: protein_coding
description:
  Murein L,D-transpeptidase; Catalyzes the formation of a meso-diaminopimelyl- meso-diaminopimelyl crosslink; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12850
symbol: aspC
gene_biotype: protein_coding
description:
  Aromatic amino acid aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12860
symbol: asnS_2
gene_biotype: protein_coding
description:
  asparaginyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12865
symbol: pncB
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.


ensembl_gene_id: LH23_12880
symbol: ssuB
gene_biotype: protein_coding
description:
  Part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic substrate-binding subunit, SsuB the ATP-binding subunit and SsuC the permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12885
symbol: ssuC
gene_biotype: protein_coding
description:
  Alkanesulfonate transporter permease subunit; Part of the ABC type transport system for alkanesulfonate SsuABC; SsuB the ATP-binding subunit and SsuC the permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12890
symbol: ssuD
gene_biotype: protein_coding
description:
  Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.


ensembl_gene_id: LH23_12895
symbol: ssuA
gene_biotype: protein_coding
description:
  Alkanesulfonate transporter substrate-binding subunit; Part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic subunit SsuB the ATP-binding subunit and SsuC the permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12900
symbol: ssuE
gene_biotype: protein_coding
description:
  NAD(P)H-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12905
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: LH23_12910
symbol: zapC
gene_biotype: protein_coding
description:
  Cell division protein ZapC; Contributes to the efficiency of the cell division process by stabilizing the polymeric form of the cell division protein FtsZ. Acts by promoting interactions between FtsZ protofilaments and suppressing the GTPase activity of FtsZ.


ensembl_gene_id: LH23_12920
symbol: rlmL
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family.


ensembl_gene_id: LH23_12925
symbol: AIR61530.1
gene_biotype: protein_coding
description:
  ABC transporter ATPase; Uup; in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity; mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12930
symbol: yebS_1
gene_biotype: protein_coding
description:
  Paraquat-inducible membrane protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12935
symbol: AIR61532.1
gene_biotype: protein_coding
description:
  Paraquat-inducible protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12960
symbol: AIR61536.1
gene_biotype: protein_coding
description:
  Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12965
symbol: fabA
gene_biotype: protein_coding
description:
  3-hydroxydecanoyl-ACP dehydratase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length.


ensembl_gene_id: LH23_12970
symbol: lon_1
gene_biotype: protein_coding
description:
  Lon protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_12975
symbol: matP
gene_biotype: protein_coding
description:
  Ter macrodomain organizer matS-binding protein; Required for spatial organization of the terminus region of the chromosome (Ter macrodomain) during the cell cycle. Prevents early segregation of duplicated Ter macrodomains during cell division. Binds specifically to matS, which is a 13 bp signature motif repeated within the Ter macrodomain.


ensembl_gene_id: LH23_12980
symbol: ompA
gene_biotype: protein_coding
description:
  Membrane protein; OmpA is believed to be a porin, involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli, and it is known to play a role as a phage receptor, a mediator of F-factor dependent conjugation, and in maintaining the structural shape of the outer membrane; 3a; II*; G; d; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.


ensembl_gene_id: LH23_12985
symbol: sxy
gene_biotype: protein_coding
description:
  Competence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13000
symbol: helD
gene_biotype: protein_coding
description:
  DNA helicase IV; Catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13010
symbol: yccT
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0319 family.


ensembl_gene_id: LH23_13020
symbol: hspQ
gene_biotype: protein_coding
description:
  Heat shock protein HspQ; Involved in the degradation of certain denaturated proteins, including DnaA, during heat shock stress; Belongs to the HspQ family.


ensembl_gene_id: LH23_13025
symbol: rlmI
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Specifically methylates the cytosine at position 1962 (m5C1962) of 23S rRNA.


ensembl_gene_id: LH23_13030
symbol: yccX
gene_biotype: protein_coding
description:
  Acylphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13040
symbol: yccA
gene_biotype: protein_coding
description:
  Membrane protein; Binds to the HflBKC complex which modulates FtsH activity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BI1 family.


ensembl_gene_id: LH23_13045
symbol: oppA_1
gene_biotype: protein_coding
description:
  Peptide ABC transporter substrate-binding protein; Is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13065
symbol: AIR61554.1
gene_biotype: protein_coding
description:
  Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13140
symbol: AIR61562.1
gene_biotype: protein_coding
description:
  MltA-interacting MipA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13160
symbol: dmsA_5
gene_biotype: protein_coding
description:
  Biotin transporter BioY; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: LH23_13170
symbol: xylG_5
gene_biotype: protein_coding
description:
  Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13175
symbol: lsrD_2
gene_biotype: protein_coding
description:
  Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: LH23_13180
symbol: rbsC_6
gene_biotype: protein_coding
description:
  ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: LH23_13190
symbol: hprA
gene_biotype: protein_coding
description:
  Dihydrofolate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: LH23_13200
symbol: mtnB
gene_biotype: protein_coding
description:
  Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). Belongs to the aldolase class II family. MtnB subfamily.


ensembl_gene_id: LH23_13210
symbol: yrdA_3
gene_biotype: protein_coding
description:
  Carbonate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13225
symbol: feuC
gene_biotype: protein_coding
description:
  ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: LH23_13240
symbol: sdh
gene_biotype: protein_coding
description:
  AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: LH23_13255
symbol: agp_2
gene_biotype: protein_coding
description:
  Glucose-1-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13265
symbol: wrbA
gene_biotype: protein_coding
description:
  NAD(P)H:quinone oxidoreductase; Catalyzes the transfer of electrons from NADH to ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13270
symbol: AIR61587.1
gene_biotype: protein_coding
description:
  Stress-induced protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13290
symbol: putA
gene_biotype: protein_coding
description:
  Transcriptional regulator; Proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: LH23_13295
symbol: putP_2
gene_biotype: protein_coding
description:
  Proline:sodium symporter PutP; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: LH23_13300
symbol: efeU_2
gene_biotype: protein_coding
description:
  Iron permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13305
symbol: efeO_1
gene_biotype: protein_coding
description:
  Ferrous iron transporter; With EfeUB forms an iron transport system which is silent in E. coli K-12 due to a mutation in EfeU; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13310
symbol: efeB
gene_biotype: protein_coding
description:
  Peroxidase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.


ensembl_gene_id: LH23_13320
symbol: chbB
gene_biotype: protein_coding
description:
  PTS system N,N'-diacetylchitobiose-specific transporter subunit IIB; Catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved in N,N'-diacetylchitobiose transport; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13325
symbol: chbC_3
gene_biotype: protein_coding
description:
  PTS system N,N'-diacetylchitobiose-specific transporter subunit IIC; Catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved in N,N'-diacetylchitobiose transport; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13330
symbol: chbA_2
gene_biotype: protein_coding
description:
  PTS system N,N'-diacetylchitobiose-specific transporter subunit IIA; Catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved N,N'-diacetylchitobiose transport; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13335
symbol: chbR
gene_biotype: protein_coding
description:
  Transcriptional regulator; Represses the celABCDF-ydjC operon involved in carbon uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13340
symbol: chbF_2
gene_biotype: protein_coding
description:
  Diacetylchitobiose-6-phosphate hydrolase; Catalyzes the fromation of N-acetyl-D-glucosamine and N-acetyl-D-glucosamine-6-phosphate from diacetylchitobiose-6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13360
symbol: oprM_3
gene_biotype: protein_coding
description:
  Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13365
symbol: acrB_5
gene_biotype: protein_coding
description:
  Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: LH23_13370
symbol: mexA_2
gene_biotype: protein_coding
description:
  Acriflavine resistance protein E; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: LH23_13385
symbol: ghrA
gene_biotype: protein_coding
description:
  Bifunctional glyoxylate/hydroxypyruvate reductase A; Catalyzes the formation of glycolate and glycerate from glyoxylate and hydroxypyruvate, respectively; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13405
symbol: AIR61612.1
gene_biotype: protein_coding
description:
  Curli production assembly/transport protein CsgG; Involved in the stability of the curlin proteins during assembly; involved in the secretion of the major curlin subunit CsgA across the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13410
symbol: AIR61613.1
gene_biotype: protein_coding
description:
  Curli assembly protein CsgF; Nucleator protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation); part of the curli secretion and assembly protein complex; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13415
symbol: AIR61614.1
gene_biotype: protein_coding
description:
  Curli assembly protein CsgE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13420
symbol: csgD
gene_biotype: protein_coding
description:
  Transcriptional regulator; Activates the csgBA and csgDEFG operons involved in biofilm formation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13425
symbol: csgB
gene_biotype: protein_coding
description:
  Curlin minor subunit CsgB; CsgB; functions as a nucleator in the assembly of curli (coiled surface structures) on the cell surface; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13435
symbol: csgC
gene_biotype: protein_coding
description:
  Curli assembly protein CsgC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13445
symbol: AIR61620.1
gene_biotype: protein_coding
description:
  Membrane protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: LH23_13475
symbol: ymdB
gene_biotype: protein_coding
description:
  RNase III inhibitor; Deacetylates O-acetyl-ADP ribose to yield ADP-ribose and free acetate. Down-regulates ribonuclease 3 (RNase III) activity. Acts by interacting directly with the region of the ribonuclease that is required for dimerization/activation; Belongs to the YmdB family.


ensembl_gene_id: LH23_13480
symbol: opgC
gene_biotype: protein_coding
description:
  Glucans biosynthesis protein; Necessary for the succinyl substitution of periplasmic glucans. Could catalyze the transfer of succinyl residues from the cytoplasmic side of the membrane to the nascent glucan backbones on the periplasmic side of the membrane.


ensembl_gene_id: LH23_13485
symbol: mdoG
gene_biotype: protein_coding
description:
  Glucan biosynthesis protein G; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs).


ensembl_gene_id: LH23_13490
symbol: mdoH_2
gene_biotype: protein_coding
description:
  Glucosyltransferase MdoH; Necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13500
symbol: AIR61629.1
gene_biotype: protein_coding
description:
  secY/secA suppressor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13510
symbol: htrB_2
gene_biotype: protein_coding
description:
  Lipid A biosynthesis lauroyl acyltransferase; Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)-(lauroyl)-lipid IV(A).


ensembl_gene_id: LH23_13515
symbol: moeZ
gene_biotype: protein_coding
description:
  Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0176 family.


ensembl_gene_id: LH23_13535
symbol: solA
gene_biotype: protein_coding
description:
  N-methyltryptophan oxidase; Catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde; FAD-binding; can also catalyze the demethylation of other N-methyl amino acids; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13540
symbol: bssS
gene_biotype: protein_coding
description:
  Biofilm formation regulatory protein BssS; BssS; regulator of biofilm through signal secretion; disruption of this gene in Escherichia coli led to effects on biofilm formation, alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13545
symbol: AIR61637.1
gene_biotype: protein_coding
description:
  Damage-inducible protein I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13560
symbol: mdtH_1
gene_biotype: protein_coding
description:
  Multidrug resistance protein MdtH; Confers resistance to norfloxacin and enoxacin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13565
symbol: ydaF_4
gene_biotype: protein_coding
description:
  Ribosomal-protein-alanine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13570
symbol: yceH
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0502 family.


ensembl_gene_id: LH23_13575
symbol: mviM
gene_biotype: protein_coding
description:
  Virulence factor MviM; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13580
symbol: mviN
gene_biotype: protein_coding
description:
  Membrane protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: LH23_13590
symbol: AIR61646.1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlgN; Export chaperone for FlgK and FlgL; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13595
symbol: flgM-2
gene_biotype: protein_coding
description:
  Negative regulator of flagellin synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13600
symbol: flgA
gene_biotype: protein_coding
description:
  Flagellar basal body P-ring biosynthesis protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.


ensembl_gene_id: LH23_13605
symbol: flgB_2
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: LH23_13610
symbol: flgC
gene_biotype: protein_coding
description:
  With FlgF and B makes up the proximal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13615
symbol: flgD-2
gene_biotype: protein_coding
description:
  Flagellar basal body rod modification protein; Required for flagellar hook formation. May act as a scaffolding protein.


ensembl_gene_id: LH23_13620
symbol: flgE-2
gene_biotype: protein_coding
description:
  The hook connects flagellar basal body to the flagellar filament; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13625
symbol: flgF
gene_biotype: protein_coding
description:
  Flagellar basal body rod protein FlgF; FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13630
symbol: flgG-2
gene_biotype: protein_coding
description:
  Makes up the distal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13640
symbol: flgI
gene_biotype: protein_coding
description:
  Flagellar basal body P-ring biosynthesis protein FlgA; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: LH23_13645
symbol: flgJ
gene_biotype: protein_coding
description:
  Flagellar rod assembly protein FlgJ; Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13650
symbol: flgK
gene_biotype: protein_coding
description:
  With FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13655
symbol: flgL
gene_biotype: protein_coding
description:
  With FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13675
symbol: rne
gene_biotype: protein_coding
description:
  Ribonuclease E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily.


ensembl_gene_id: LH23_13685
symbol: yhdE_2
gene_biotype: protein_coding
description:
  Septum formation inhibitor Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes 7- methyl-GTP (m(7)GTP). May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids; Belongs to the Maf family. YceF subfamily.


ensembl_gene_id: LH23_13695
symbol: rpmF
gene_biotype: protein_coding
description:
  Some L32 proteins have zinc finger motifs consisting of CXXC while others do not; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL32 family.


ensembl_gene_id: LH23_13700
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: LH23_13705
symbol: fabH_2
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: LH23_13710
symbol: fabD_3
gene_biotype: protein_coding
description:
  Malonyl CoA-ACP transacylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13715
symbol: fabG-2
gene_biotype: protein_coding
description:
  3-ketoacyl-ACP reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: LH23_13725
symbol: fabF_6
gene_biotype: protein_coding
description:
  FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: LH23_13730
symbol: pabC_1
gene_biotype: protein_coding
description:
  4-amino-4-deoxychorismate lyase; Catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13735
symbol: yceG_2
gene_biotype: protein_coding
description:
  Aminodeoxychorismate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13740
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: LH23_13745
symbol: holB
gene_biotype: protein_coding
description:
  DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13755
symbol: ptsG_4
gene_biotype: protein_coding
description:
  PTS glucose-specific subunit IIBC; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13760
symbol: hinT_2
gene_biotype: protein_coding
description:
  Purine nucleoside phosphoramidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13770
symbol: lpoB
gene_biotype: protein_coding
description:
  Penicillin-binding protein; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b). Belongs to the LpoB family.


ensembl_gene_id: LH23_13780
symbol: nagZ
gene_biotype: protein_coding
description:
  Beta-hexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.


ensembl_gene_id: LH23_13785
symbol: AIR61685.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0227 family.


ensembl_gene_id: LH23_13790
symbol: ndh_1
gene_biotype: protein_coding
description:
  NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13805
symbol: iutA_1
gene_biotype: protein_coding
description:
  Ligand-gated channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13810
symbol: iucD_1
gene_biotype: protein_coding
description:
  Lysine 6-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13815
symbol: iucC_2
gene_biotype: protein_coding
description:
  Aerobactin synthase IucC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13820
symbol: iucB_1
gene_biotype: protein_coding
description:
  Hydroxylysine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13825
symbol: iucA_3
gene_biotype: protein_coding
description:
  Aerobactin synthase IucA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13835
symbol: viuB
gene_biotype: protein_coding
description:
  Iron utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13850
symbol: ycfS_2
gene_biotype: protein_coding
description:
  Peptigoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13855
symbol: mfd_4
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13865
symbol: lolC_1
gene_biotype: protein_coding
description:
  Outer membrane-specific lipoprotein transporter subunit LolC; Part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13870
symbol: lolD
gene_biotype: protein_coding
description:
  Lipoprotein ABC transporter ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.


ensembl_gene_id: LH23_13875
symbol: lolE
gene_biotype: protein_coding
description:
  Outer membrane-specific lipoprotein transporter subunit LolE; Part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13880
symbol: nagK_1
gene_biotype: protein_coding
description:
  N-acetylglucosamine kinase; Catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13885
symbol: cobB_1
gene_biotype: protein_coding
description:
  NAD-dependent deacetylase; Modulates the activities of several enzymes which are inactive in their acetylated form; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sirtuin family. Class III subfamily.


ensembl_gene_id: LH23_13895
symbol: potC
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter permease; Can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotC is a membrane component; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13900
symbol: potB
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter permease; Can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotB is a membrane component; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13905
symbol: potA
gene_biotype: protein_coding
description:
  Putrescine/spermidine ABC transporter ATPase; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: LH23_13910
symbol: pepT
gene_biotype: protein_coding
description:
  Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.


ensembl_gene_id: LH23_13935
symbol: kefA_3
gene_biotype: protein_coding
description:
  Mechanosensitive ion channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13965
symbol: phoQ
gene_biotype: protein_coding
description:
  Sensor protein PhoQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13970
symbol: phoP_2
gene_biotype: protein_coding
description:
  Response regulator in two-component regulatory system with PhoQ; involved in magnesium starvation and stress; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13975
symbol: purB
gene_biotype: protein_coding
description:
  Adenylosuccinate lyase; Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.


ensembl_gene_id: LH23_13980
symbol: hflD_1
gene_biotype: protein_coding
description:
  Lysogenization regulator; HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13985
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA 2-thiouridylase; Catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_13990
symbol: nudJ
gene_biotype: protein_coding
description:
  Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family. NudJ subfamily.


ensembl_gene_id: LH23_14000
symbol: rluE
gene_biotype: protein_coding
description:
  23S rRNA pseudouridylate synthase; Catalyzes the formation of pseudouridine from uracil-2457 in 23S ribosomal RNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: LH23_14005
symbol: icd
gene_biotype: protein_coding
description:
  Converts isocitrate to alpha ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14040
symbol: AIR61735.1
gene_biotype: protein_coding
description:
  GDP-mannose pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14045
symbol: AIR61736.1
gene_biotype: protein_coding
description:
  NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14080
symbol: AIR61743.1
gene_biotype: protein_coding
description:
  Membrane protein YqaE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14085
symbol: AIR61744.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14105
symbol: AIR61748.1
gene_biotype: protein_coding
description:
  MarR family transcripitonal regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14150
symbol: fliY_7
gene_biotype: protein_coding
description:
  Cysteine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: LH23_14185
symbol: mutT_3
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutT; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family.


ensembl_gene_id: LH23_14195
symbol: ariR
gene_biotype: protein_coding
description:
  Two-component-system connector protein AriR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14205
symbol: AIR61767.1
gene_biotype: protein_coding
description:
  Two-component-system connector protein YcgZ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14225
symbol: AIR61770.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0229 family.


ensembl_gene_id: LH23_14315
symbol: AIR61781.1
gene_biotype: protein_coding
description:
  Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14325
symbol: AIR61782.1
gene_biotype: protein_coding
description:
  Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14390
symbol: mipA_3
gene_biotype: protein_coding
description:
  MltA-interacting protein MipA; Scaffolding protein for the murein polymerase MrcB and the lytic transglycosylase MltA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14395
symbol: yeaD_1
gene_biotype: protein_coding
description:
  Glucose-6-phosphate 1-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14400
symbol: gapA-2
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: LH23_14405
symbol: msrB
gene_biotype: protein_coding
description:
  Methionine sulfoxide reductase B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MsrB Met sulfoxide reductase family.


ensembl_gene_id: LH23_14415
symbol: chiA1_2
gene_biotype: protein_coding
description:
  Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 18 family.


ensembl_gene_id: LH23_14420
symbol: AIR61798.1
gene_biotype: protein_coding
description:
  Nicotinamidase/pyrazinamidase; Catalyzes the formation of nicotinate from nicotinamide in NAD biosynthesis and the formation of pyrazinoate from pyrazinamide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14425
symbol: ansA
gene_biotype: protein_coding
description:
  Cytoplasmic asparaginase I; Converts asparagine to aspartate and ammonia; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14430
symbol: sppA
gene_biotype: protein_coding
description:
  Protease 4; SppA; catalyzes the degradation of cleaved signal peptides; essential to maintain secretion of mature proteins across the membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14440
symbol: phoC_2
gene_biotype: protein_coding
description:
  Acid phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14450
symbol: topB_5
gene_biotype: protein_coding
description:
  DNA topoisomerase III; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA su [...]


ensembl_gene_id: LH23_14460
symbol: nudG
gene_biotype: protein_coding
description:
  Pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family.


ensembl_gene_id: LH23_14470
symbol: ynjF_1
gene_biotype: protein_coding
description:
  Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: LH23_14475
symbol: ynjE_2
gene_biotype: protein_coding
description:
  Thiosulfate sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14495
symbol: AIR61813.1
gene_biotype: protein_coding
description:
  Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14510
symbol: xthA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14515
symbol: astC_2
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase; Catalyzes the transamination of 2-N-succinylornithine and alpha-ketoglutarate into 2-N-succinylglutamate semialdehyde and glutamate; also functions as the catabolic acetylornithine aminotransferase catalyzing the formation of 2-N-acetylglutamate semialdehyde and glutamate from 2-N-acetylornithine and alpha-ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14520
symbol: aruG_2
gene_biotype: protein_coding
description:
  Arginine succinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14525
symbol: astD
gene_biotype: protein_coding
description:
  A high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14530
symbol: astB_2
gene_biotype: protein_coding
description:
  Catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14535
symbol: astE_1
gene_biotype: protein_coding
description:
  Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily.


ensembl_gene_id: LH23_14540
symbol: spy
gene_biotype: protein_coding
description:
  Periplasmic protein induced by stress response via Cpx and BaeSR system; similar to CpxP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14550
symbol: hutH_2
gene_biotype: protein_coding
description:
  Catalyzes the degradation of histidine to urocanate and ammmonia; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14555
symbol: cho
gene_biotype: protein_coding
description:
  Nucleotide excision repair endonuclease; 3' incision activity; acts with UvrC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14560
symbol: yddG
gene_biotype: protein_coding
description:
  Aromatic amino acid exporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14565
symbol: nadE
gene_biotype: protein_coding
description:
  NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.


ensembl_gene_id: LH23_14570
symbol: AIR61828.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Osmotically-inducible lipoprotein E; activator of ntr-like gene protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14575
symbol: cedA
gene_biotype: protein_coding
description:
  Cell division modulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14580
symbol: tcyP
gene_biotype: protein_coding
description:
  L-cystine transporter tcyP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: LH23_14590
symbol: yniC
gene_biotype: protein_coding
description:
  2-deoxyglucose-6-phosphatase; YniC; catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate, mannose 6-phosphate and p-nitrophenyl phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14600
symbol: AIR61834.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the fructosamine kinase family.


ensembl_gene_id: LH23_14610
symbol: pfkB_1
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14625
symbol: thrS
gene_biotype: protein_coding
description:
  threonine--tRNA ligase; Catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: LH23_14630
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: LH23_14635
symbol: rpmI
gene_biotype: protein_coding
description:
  50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL35 family.


ensembl_gene_id: LH23_14640
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: LH23_14645
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: LH23_14650
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanine--tRNA ligase; Catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: LH23_14655
symbol: ihfA
gene_biotype: protein_coding
description:
  Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: LH23_14665
symbol: btuC_1
gene_biotype: protein_coding
description:
  Vitamin B12 import system permease BtuC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: LH23_14670
symbol: btuE
gene_biotype: protein_coding
description:
  Similar to glutathione peroxidase; member of the btuCED operon which is required for vitamin B12 transport across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14675
symbol: btuD
gene_biotype: protein_coding
description:
  Vitamin B12-transporter ATPase; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system.


ensembl_gene_id: LH23_14690
symbol: cdgR_2
gene_biotype: protein_coding
description:
  Cyclic di-GMP regulator CdgR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14700
symbol: hmuV
gene_biotype: protein_coding
description:
  Hemin importer ATP-binding subunit; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.


ensembl_gene_id: LH23_14710
symbol: hmuT_4
gene_biotype: protein_coding
description:
  Hemin ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14715
symbol: hemS
gene_biotype: protein_coding
description:
  Hemin transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14725
symbol: AIR61859.1
gene_biotype: protein_coding
description:
  Hemin transporter HemP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14735
symbol: ydiA
gene_biotype: protein_coding
description:
  PEP synthetase regulatory protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: LH23_14740
symbol: ppsA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: LH23_14745
symbol: AIR61863.1
gene_biotype: protein_coding
description:
  Enterochelin esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14750
symbol: fhuA_9
gene_biotype: protein_coding
description:
  Ferrichrysobactin receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14760
symbol: ydiK
gene_biotype: protein_coding
description:
  YdiK; inner membrane protein; ydiK promoter presents a PurR sequence, suggesting that its expression is purine-regulated; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14770
symbol: ydiI
gene_biotype: protein_coding
description:
  Thioesterase; Required for efficient enterobactin production; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14800
symbol: sufA
gene_biotype: protein_coding
description:
  Functions as a scaffold on which iron-sulfur clusters ([2Fe-2S]; [4Fe-4S]) are assembled; forms a homodimer; similar to IscA protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HesB/IscA family.


ensembl_gene_id: LH23_14805
symbol: sufB
gene_biotype: protein_coding
description:
  With SufCD activates cysteine desulfurase SufS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14810
symbol: sufC
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Part of SUF system involved in inserting iron-sulfur clusters into proteins; in Escherichia coli this protein forms a complex with SufBD; the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14815
symbol: sufD
gene_biotype: protein_coding
description:
  With SufBC activates cysteine desulfurase SufS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14825
symbol: sufE
gene_biotype: protein_coding
description:
  Cysteine desufuration protein SufE; Participates in cysteine desulfuration mediated by SufS. Cysteine desulfuration mobilizes sulfur from L-cysteine to yield L- alanine and constitutes an essential step in sulfur metabolism for biosynthesis of a variety of sulfur-containing biomolecules. Functions as a sulfur acceptor for SufS, by mediating the direct transfer of the sulfur atom from the S-sulfanylcysteine of SufS, an intermediate product of cysteine desulfuration process; Belongs to the SufE family.


ensembl_gene_id: LH23_14830
symbol: ynhG_2
gene_biotype: protein_coding
description:
  Murein L,D-transpeptidase; Catalyzes the formation of a meso-diaminopimelyl-3-a meso-diaminopimelyl-3 cross-link in peptidoglycan synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14835
symbol: lpp
gene_biotype: protein_coding
description:
  Major outer membrane lipoprotein; interacts with peptidoglycan to maintain the integrity of the cell envelope; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14840
symbol: pykF_1
gene_biotype: protein_coding
description:
  Pyruvate kinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14890
symbol: mdtK_2
gene_biotype: protein_coding
description:
  Multidrug transporter; NorM; MdtK; functions as a Na(+)/drug antiporter; inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14895
symbol: ribE_1
gene_biotype: protein_coding
description:
  Riboflavin synthase subunit alpha; Catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14905
symbol: cfa_4
gene_biotype: protein_coding
description:
  Cyclopropane fatty acyl phospholipid synthase; Catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14910
symbol: ydhC_2
gene_biotype: protein_coding
description:
  Transporter; Uncharacterized member of the major facilitator superfamily (MFS); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14920
symbol: purR
gene_biotype: protein_coding
description:
  Transcriptional regulator; Is the main repressor of the genes involved in the de novo synthesis of purine nucleotides, regulating purB, purC, purEK, purF, purHD, purL, purMN and guaBA expression. PurR is allosterically activated to bind its cognate DNA by binding the purine corepressors, hypoxanthine or guanine, thereby effecting transcription repression.


ensembl_gene_id: LH23_14940
symbol: grxD
gene_biotype: protein_coding
description:
  Glutaredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutaredoxin family. Monothiol subfamily.


ensembl_gene_id: LH23_14950
symbol: rnt
gene_biotype: protein_coding
description:
  Ribonuclease T; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis.


ensembl_gene_id: LH23_14955
symbol: gloA
gene_biotype: protein_coding
description:
  Glyoxalase I; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.


ensembl_gene_id: LH23_14960
symbol: nemA_2
gene_biotype: protein_coding
description:
  N-ethylmaleimide reductase; FMN-linked; catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14965
symbol: nemR_2
gene_biotype: protein_coding
description:
  Transcriptional repressor NemR; Represses nemA which is involved in degradation of N-ethylmaleimide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14980
symbol: aaeB_3
gene_biotype: protein_coding
description:
  Fusaric acid resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_14995
symbol: AIR61907.1
gene_biotype: protein_coding
description:
  Transcriptional regulator SlyA; Transcription regulator that can both activate or repress expression; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15000
symbol: limB_2
gene_biotype: protein_coding
description:
  Alkane 1-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15010
symbol: moxC_1
gene_biotype: protein_coding
description:
  Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15045
symbol: anmK
gene_biotype: protein_coding
description:
  anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.


ensembl_gene_id: LH23_15050
symbol: mliC
gene_biotype: protein_coding
description:
  MliC; membrane-bound lysozyme inhibitor of c-type lysozyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15055
symbol: pdxH
gene_biotype: protein_coding
description:
  Pyridoxamine 5'-phosphate oxidase; Catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15060
symbol: tyrS_1
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15065
symbol: pdxY_2
gene_biotype: protein_coding
description:
  Pyridoxamine kinase; Catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15075
symbol: tppB
gene_biotype: protein_coding
description:
  Peptide ABC transporter permease; Mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium; member of proton-dependent oligopeptide transport (POT) system family; in Escherichia coli this gene is regulated by OmpR although not via osmoregulation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15080
symbol: nth_2
gene_biotype: protein_coding
description:
  Endonuclease III; DNA-(apurinic or apyrimidinic site) lyase; has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity; removed damaged DNA at cytosines, thymines and guanines; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15085
symbol: rnfE_1
gene_biotype: protein_coding
description:
  Elongation factor G; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15090
symbol: AIR61926.1
gene_biotype: protein_coding
description:
  Electron transporter RnfG; Part of membrane-bound complex hought to be involved in electron transport to nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15095
symbol: rnfD
gene_biotype: protein_coding
description:
  Electron transporter RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: LH23_15100
symbol: rnfC_2
gene_biotype: protein_coding
description:
  Electron transporter RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.


ensembl_gene_id: LH23_15105
symbol: rnfB
gene_biotype: protein_coding
description:
  Electron transporter RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: LH23_15110
symbol: rnfA
gene_biotype: protein_coding
description:
  Electron transporter RsxA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: LH23_15120
symbol: cnu
gene_biotype: protein_coding
description:
  oriC-binding nucleoid-associated protein; YdgT; in E. coli, when complexed with H-NS or StpA binds a 26 base-pair DNA sequence of oriC; seems to play a role in optimizing the activity of oriC; non-essential; Hha protein paralog; in an hha mutant background, cnu is overexpressed and can compensate hha-induced phenotypes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15130
symbol: hxuB
gene_biotype: protein_coding
description:
  Heme/hemopexin utilization protein B precursor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15145
symbol: add
gene_biotype: protein_coding
description:
  Adenosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family. Adenosine deaminase subfamily.


ensembl_gene_id: LH23_15170
symbol: malY
gene_biotype: protein_coding
description:
  Bifunctional beta-cystathionase/maltose regulon regulatory protein; Catalyzes the formation of homocysteine and pyruvate from cystathionine; also acts a a negative regulator for the mal regulon but interacting with the transcriptional activator MalT; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15175
symbol: ptsG_3
gene_biotype: protein_coding
description:
  Bifunctional PTS system maltose and glucose-specific transporter subunits IICB; Phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS); catalyzes the phosphorylation of maltose and glucose concomitant with their translocation across the cell membrane; component IIB catalyzes the phosphorylation of the sugar molecule; IIC forms the translocation channel and contains the substrate specific binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15185
symbol: degA_3
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates malXY which are involved in maltose-glucose transport; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15210
symbol: manA_4
gene_biotype: protein_coding
description:
  Mannose-6-phosphate isomerase; Catalyzes the formation of of fructose 6-phosphate from mannose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mannose-6-phosphate isomerase type 1 family.


ensembl_gene_id: LH23_15220
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarate hydratase; Class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15225
symbol: tus_1
gene_biotype: protein_coding
description:
  DNA replication terminus site-binding protein; Binds to DNA replication terminator sequences to prevent passage of replication forks; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15230
symbol: rstB
gene_biotype: protein_coding
description:
  Sensor protein RstB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15240
symbol: rstA
gene_biotype: protein_coding
description:
  Response regulator in two-component regulatory system with RstB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15245
symbol: folM
gene_biotype: protein_coding
description:
  Dihydromonapterin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15250
symbol: ydgI_3
gene_biotype: protein_coding
description:
  Arginine:ornithine antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15260
symbol: pntA
gene_biotype: protein_coding
description:
  NAD(P) transhydrogenase subunit alpha; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the AlaDH/PNT family.


ensembl_gene_id: LH23_15265
symbol: pntB
gene_biotype: protein_coding
description:
  Pyridine nucleotide transhydrogenase; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.


ensembl_gene_id: LH23_15270
symbol: uspE
gene_biotype: protein_coding
description:
  Universal stress protein UspE; With UspC and UspD is involved in resistance to UV irradiation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15275
symbol: fnr_1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Global transcription factor that controls the expression of over 100 target genes in response to anoxia; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15280
symbol: ogt_2
gene_biotype: protein_coding
description:
  Cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: LH23_15285
symbol: smrA
gene_biotype: protein_coding
description:
  DNA endonuclease SmrA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15300
symbol: pnbA
gene_biotype: protein_coding
description:
  Carboxylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the type-B carboxylesterase/lipase family.


ensembl_gene_id: LH23_15310
symbol: ybdL_2
gene_biotype: protein_coding
description:
  Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15320
symbol: mdoD
gene_biotype: protein_coding
description:
  Glucan biosynthesis protein D; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs).


ensembl_gene_id: LH23_15325
symbol: AIR61972.1
gene_biotype: protein_coding
description:
  DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15330
symbol: AIR61973.1
gene_biotype: protein_coding
description:
  Hexulose-6-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15335
symbol: rimL
gene_biotype: protein_coding
description:
  Ribosomal-protein-serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15345
symbol: tehA
gene_biotype: protein_coding
description:
  Potassium-tellurite ethidium and proflavin transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15350
symbol: tehB
gene_biotype: protein_coding
description:
  With TehA confers resistance to tellurite; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15355
symbol: pepT_1
gene_biotype: protein_coding
description:
  Catalyzes the release of the N-terminal amino acid from a tripeptide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15365
symbol: gmuC_5
gene_biotype: protein_coding
description:
  Oligo-beta-mannoside permease IIC protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15400
symbol: ydcO
gene_biotype: protein_coding
description:
  Benzoate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15415
symbol: arnB_5
gene_biotype: protein_coding
description:
  UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase; Catalyzes the conversion of UDP-4-keto-arabinose (UDP-Ara4O) to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; Belongs to the DegT/DnrJ/EryC1 family. ArnB subfamily.


ensembl_gene_id: LH23_15420
symbol: arnC_3
gene_biotype: protein_coding
description:
  Catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15425
symbol: arnA_2
gene_biotype: protein_coding
description:
  UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Bifunctional polymyxin resistance arnA protein; catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose; active in certain mutant strains; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15430
symbol: arnD_3
gene_biotype: protein_coding
description:
  4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase; Catalyzes the formation of 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol from 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15435
symbol: arnT
gene_biotype: protein_coding
description:
  4-amino-4-deoxy-L-arabinose transferase; Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides. Belongs to the glycosyltransferase 83 family.


ensembl_gene_id: LH23_15440
symbol: arnE
gene_biotype: protein_coding
description:
  4-amino-4-deoxy-L-arabinose-phospho-UDP flippase; Translocates 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane; Belongs to the ArnE family.


ensembl_gene_id: LH23_15445
symbol: arnF
gene_biotype: protein_coding
description:
  4-amino-4-deoxy-L-arabinose-phospho-UDP flippase; Translocates 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane; Belongs to the ArnF family.


ensembl_gene_id: LH23_15450
symbol: flr
gene_biotype: protein_coding
description:
  Flavin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15480
symbol: metQ_4
gene_biotype: protein_coding
description:
  Methionine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nlpA lipoprotein family.


ensembl_gene_id: LH23_15485
symbol: metP_2
gene_biotype: protein_coding
description:
  Methionine import system permease MetP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15490
symbol: metN_4
gene_biotype: protein_coding
description:
  Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: LH23_15500
symbol: yehT
gene_biotype: protein_coding
description:
  Two-component response-regulatory protein YehT; Unknown function; when overproduced it confers drug-resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15505
symbol: yjiA_3
gene_biotype: protein_coding
description:
  GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15525
symbol: AIR62012.1
gene_biotype: protein_coding
description:
  CS1 type fimbrial major subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15550
symbol: hmsH
gene_biotype: protein_coding
description:
  In Yersinia this protein is important for biofilm formation and hemin adsorption; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15555
symbol: pgaB
gene_biotype: protein_coding
description:
  Outer membrane N-deacetylase; In Yersinia this protein is involved in biofilm formation and hemin adsorption; related protein PgaB in Escherichia coli is an outer membrane N-deacetylase involved in poly-beta-1,6-N-acetyl-D-glucosamine (PGA) export; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15560
symbol: pgaC_1
gene_biotype: protein_coding
description:
  N-glycosyltransferase; Predicted polysaccharide polymerase involved in biofilm formation; required for the synthesis of the beta-1,6-N-acetylglucosamine polysaccharide; PgaC; in Yersinia the HmsR protein is an inner membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15585
symbol: AIR62024.1
gene_biotype: protein_coding
description:
  Ammonia monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15595
symbol: AIR62026.1
gene_biotype: protein_coding
description:
  Metal activated pyridoxal enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15620
symbol: bsaA_2
gene_biotype: protein_coding
description:
  Glutathione peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutathione peroxidase family.


ensembl_gene_id: LH23_15635
symbol: xecA1
gene_biotype: protein_coding
description:
  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; Catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15650
symbol: mexA_1
gene_biotype: protein_coding
description:
  Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: LH23_15655
symbol: fadR_2
gene_biotype: protein_coding
description:
  AcrR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15690
symbol: budA
gene_biotype: protein_coding
description:
  Alpha-acetolactate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the alpha-acetolactate decarboxylase family.


ensembl_gene_id: LH23_15695
symbol: alsS
gene_biotype: protein_coding
description:
  Acetolactate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.


ensembl_gene_id: LH23_15700
symbol: budC
gene_biotype: protein_coding
description:
  Acetoin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: LH23_15715
symbol: kup
gene_biotype: protein_coding
description:
  Potassium transporter Kup; Responsible for the low-affinity transport of potassium into the cell, with the probable concomitant uptake of protons (symport system).


ensembl_gene_id: LH23_15720
symbol: AIR62049.1
gene_biotype: protein_coding
description:
  TetR-family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15730
symbol: AIR62051.1
gene_biotype: protein_coding
description:
  Phospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15735
symbol: tqsA
gene_biotype: protein_coding
description:
  Pheromone autoinducer 2 transporter; Transport of quorum-sensing signal; mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 (AI-2) which affects expression of a large number of genes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15755
symbol: AIR62056.1
gene_biotype: protein_coding
description:
  Peptidase S14; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15760
symbol: mrdB_3
gene_biotype: protein_coding
description:
  Cell wall shape-determining protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: LH23_15765
symbol: blaSE
gene_biotype: protein_coding
description:
  Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1B family.


ensembl_gene_id: LH23_15780
symbol: ypwA
gene_biotype: protein_coding
description:
  Peptidase M32; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.


ensembl_gene_id: LH23_15795
symbol: mlc_2
gene_biotype: protein_coding
description:
  Transcriptional regulator; Mlc, controls the expression of genes involved in the phosphotransferase and phosphoenolpyruvate systems, regulates genes involved in the uptake of sugars; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15800
symbol: bioD1_2
gene_biotype: protein_coding
description:
  DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15805
symbol: clcB_1
gene_biotype: protein_coding
description:
  Voltage-gated chloride channel protein ClcB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15810
symbol: proV_4
gene_biotype: protein_coding
description:
  Glycine/betaine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15815
symbol: AIR62067.1
gene_biotype: protein_coding
description:
  Choline ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15820
symbol: opuCC
gene_biotype: protein_coding
description:
  Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15825
symbol: yehW_4
gene_biotype: protein_coding
description:
  Glycine/betaine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15830
symbol: dmsD
gene_biotype: protein_coding
description:
  Twin-argninine leader-binding protein DmsD; Required for biogenesis/assembly of DMSO reductase, but not for the interaction of the DmsA signal peptide with the Tat system. May be part of a chaperone cascade complex that facilitates a folding- maturation pathway for the substrate protein.


ensembl_gene_id: LH23_15855
symbol: AIR62074.1
gene_biotype: protein_coding
description:
  PTS fructose transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15895
symbol: AIR62081.1
gene_biotype: protein_coding
description:
  Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family.


ensembl_gene_id: LH23_15900
symbol: paaX_2
gene_biotype: protein_coding
description:
  Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15905
symbol: yrdA_2
gene_biotype: protein_coding
description:
  Carnitine operon protein CaiE; Involved in the synthesis of a cofactor required for carnitine dehydratase and carnitine racemase activities; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15910
symbol: azoR_1
gene_biotype: protein_coding
description:
  FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15915
symbol: AIR62085.1
gene_biotype: protein_coding
description:
  ATP-dependent helicase HrpA; Involved in the post-transcriptional processing of the daa operon mRNA, which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15925
symbol: fdhF_8
gene_biotype: protein_coding
description:
  CbbBc protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_15975
symbol: clpV1_6
gene_biotype: protein_coding
description:
  ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpA/ClpB family.


ensembl_gene_id: LH23_15990
symbol: AIR62100.1
gene_biotype: protein_coding
description:
  PAAR motif family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16000
symbol: AIR62102.1
gene_biotype: protein_coding
description:
  Type VI secretion protein VasK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16035
symbol: AIR62107.1
gene_biotype: protein_coding
description:
  Type VI secretion protein ImpG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16050
symbol: AIR62110.1
gene_biotype: protein_coding
description:
  Type VI secretion system lysozyme-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16080
symbol: cybB
gene_biotype: protein_coding
description:
  B-type di-heme cytochrome with a major alpha-absorption peak at 561 nm and a minor peak at 555 nm; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16090
symbol: AIR62117.1
gene_biotype: protein_coding
description:
  NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16100
symbol: ptrB_5
gene_biotype: protein_coding
description:
  Protease 2; PtrB; oligopeptidase that cleaves peptide bonds following arginine and lysine residues; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16110
symbol: AIR62121.1
gene_biotype: protein_coding
description:
  Iron-regulated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16125
symbol: AIR62124.1
gene_biotype: protein_coding
description:
  Dihydrofolate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16180
symbol: AIR62134.1
gene_biotype: protein_coding
description:
  aTP-dependent RNA helicase HrpA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16225
symbol: frmA_1
gene_biotype: protein_coding
description:
  Catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione; also catalyzes the formation of aldehyde or ketone from alcohols; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.


ensembl_gene_id: LH23_16230
symbol: katG_2
gene_biotype: protein_coding
description:
  Peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.


ensembl_gene_id: LH23_16235
symbol: speG
gene_biotype: protein_coding
description:
  Spermidine acetyltransferase; Catalyzes the formation of N(1)- and N(8)-acetylspermidine from spermidine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16250
symbol: ydfG_2
gene_biotype: protein_coding
description:
  Malonic semialdehyde reductase; NADP(+)-dependent; catalyzes the formation of 3-hydroxypropionate from the toxic malonic semialdehyde, catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine; can also use 3-hydroxybutyrate, 3-hydroxy-isobutyrate, D-threonine, L-allo-threonine,D-serine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: LH23_16255
symbol: dcp_1
gene_biotype: protein_coding
description:
  Dipeptidyl carboxypeptidase II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16290
symbol: AIR62152.1
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16305
symbol: tam_2
gene_biotype: protein_coding
description:
  Trans-aconitate methyltransferase; Catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16315
symbol: ydfZ
gene_biotype: protein_coding
description:
  Selenoprotein YdfZ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16340
symbol: ftrA
gene_biotype: protein_coding
description:
  Transcriptional regulator; Upregulated by FixLJ/FixK under oxygen limitation; involved in regulation of genes involved in carbon and amino acid metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16345
symbol: AIR62163.1
gene_biotype: protein_coding
description:
  Rhodanese; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16365
symbol: porB
gene_biotype: protein_coding
description:
  Pyruvate-flavodoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16380
symbol: hslJ
gene_biotype: protein_coding
description:
  Heat-inducible protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16385
symbol: ldhA
gene_biotype: protein_coding
description:
  Lactate dehydrogenase; Fermentative; catalyzes the formationof pyruvate from lactate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: LH23_16405
symbol: feaR
gene_biotype: protein_coding
description:
  Transcriptional regulator; Activator of genes involved in phenylacetic acid catabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16420
symbol: AIR62178.1
gene_biotype: protein_coding
description:
  Type 1 secretion target domain-containng protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16445
symbol: tynA
gene_biotype: protein_coding
description:
  Tyramine oxidase; Catalyzes the formation of phenylacetaldehyde from 2-phenylethylamine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16450
symbol: boxD_1
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase; Catalyzes the ring cleavage reaction in phenylacetate degradation and the formation of 3-hydroxyacyl-CoA from crotonyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16455
symbol: paaA
gene_biotype: protein_coding
description:
  ATPase AAA; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16460
symbol: paaB
gene_biotype: protein_coding
description:
  phenylacetate-CoA oxygenase; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16480
symbol: echA8_4
gene_biotype: protein_coding
description:
  2,3-dehydroadipyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16485
symbol: AIR62191.1
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16490
symbol: paaH_3
gene_biotype: protein_coding
description:
  3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16500
symbol: paaJ_1
gene_biotype: protein_coding
description:
  Catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16505
symbol: paaK_3
gene_biotype: protein_coding
description:
  phenylacetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16515
symbol: AIR62197.1
gene_biotype: protein_coding
description:
  Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16545
symbol: AIR62203.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16550
symbol: ygaZ
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16570
symbol: nfrB
gene_biotype: protein_coding
description:
  Bacteriophage N4 adsorption protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16590
symbol: AIR62209.1
gene_biotype: protein_coding
description:
  Ubiquinol oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16595
symbol: cydA_3
gene_biotype: protein_coding
description:
  Cytochrome D ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16600
symbol: AIR62211.1
gene_biotype: protein_coding
description:
  KTSC domain containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16605
symbol: csn_2
gene_biotype: protein_coding
description:
  Chitosanase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16615
symbol: suhB_2
gene_biotype: protein_coding
description:
  Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16625
symbol: AIR62216.1
gene_biotype: protein_coding
description:
  Ribonuclease Z; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16630
symbol: potA_5
gene_biotype: protein_coding
description:
  Putrescine/spermidine ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16655
symbol: AIR62222.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16665
symbol: cpdA_4
gene_biotype: protein_coding
description:
  3',5'-cyclic-nucleotide phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16705
symbol: patD
gene_biotype: protein_coding
description:
  Gamma-aminobutyraldehyde dehydrogenase; Catalyzes the oxidation 4-aminobutanal (gamma- aminobutyraldehyde) to 4-aminobutanoate (gamma-aminobutyrate or GABA). This is the second step in one of two pathways for putrescine degradation, where putrescine is converted into 4-aminobutanoate via 4- aminobutanal. Also functions as a 5-aminopentanal dehydrogenase in a a L-lysine degradation pathway to succinate that proceeds via cadaverine, glutarate and L-2-hydroxyglutarate.


ensembl_gene_id: LH23_16710
symbol: ygaU
gene_biotype: protein_coding
description:
  Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16725
symbol: AIR62235.1
gene_biotype: protein_coding
description:
  Nickel transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16730
symbol: gsiA_29
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: LH23_16750
symbol: AIR62240.1
gene_biotype: protein_coding
description:
  Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16755
symbol: AIR62241.1
gene_biotype: protein_coding
description:
  Ornithine cyclodeaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16760
symbol: dcyD_3
gene_biotype: protein_coding
description:
  Pyridoxal-5'-phosphate-dependent protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16790
symbol: metC_2
gene_biotype: protein_coding
description:
  Cystathionine beta-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16810
symbol: yqfB
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0267 family.


ensembl_gene_id: LH23_16825
symbol: yqjH
gene_biotype: protein_coding
description:
  FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16840
symbol: AIR62258.1
gene_biotype: protein_coding
description:
  Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16860
symbol: AIR62262.1
gene_biotype: protein_coding
description:
  Fasciclin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16865
symbol: sigK
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: LH23_16875
symbol: proY_2
gene_biotype: protein_coding
description:
  Involved in the transporte of L-asparagine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16880
symbol: acrA_2
gene_biotype: protein_coding
description:
  Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: LH23_16885
symbol: mdtC_5
gene_biotype: protein_coding
description:
  Acriflavine resistance protein B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: LH23_16890
symbol: cusR_1
gene_biotype: protein_coding
description:
  Response regulator in two-component regulatory system with CusS; regulates the copper efflux system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16900
symbol: macA_7
gene_biotype: protein_coding
description:
  Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16905
symbol: macB_9
gene_biotype: protein_coding
description:
  Macrolide transporter; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.


ensembl_gene_id: LH23_16910
symbol: oprM_2
gene_biotype: protein_coding
description:
  RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16920
symbol: AIR62274.1
gene_biotype: protein_coding
description:
  MmcQ protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16930
symbol: rhmR
gene_biotype: protein_coding
description:
  IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16935
symbol: kdgT
gene_biotype: protein_coding
description:
  2-keto-3-deoxygluconate permease; The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system. Belongs to the KdgT transporter family.


ensembl_gene_id: LH23_16940
symbol: kduI
gene_biotype: protein_coding
description:
  5-keto-4-deoxyuronate isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.


ensembl_gene_id: LH23_16945
symbol: kduD_3
gene_biotype: protein_coding
description:
  Catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16950
symbol: lacZ
gene_biotype: protein_coding
description:
  beta-D-galactosidase; Forms a homotetramer; hydrolyzes lactose disaccharide to galactose and glucose; converts lactose to allolactose which is the natural inducer of the lac operon; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16955
symbol: lacI
gene_biotype: protein_coding
description:
  Transcriptional repressor of lac operon; forms a homotetramer as a dimer of dimers; binds specific sites in lac operon resulting in DNA looping between the operators; binds allolactose as inducer; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16965
symbol: nhoA
gene_biotype: protein_coding
description:
  N-hydroxyarylamine O-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arylamine N-acetyltransferase family.


ensembl_gene_id: LH23_16975
symbol: AIR62284.1
gene_biotype: protein_coding
description:
  Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_16985
symbol: betP
gene_biotype: protein_coding
description:
  Proton-motive-force-driven choline transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BCCT transporter (TC 2.A.15) family.


ensembl_gene_id: LH23_16995
symbol: betB_1
gene_biotype: protein_coding
description:
  Betaine-aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: LH23_17000
symbol: betA
gene_biotype: protein_coding
description:
  Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.


ensembl_gene_id: LH23_17005
symbol: pptA
gene_biotype: protein_coding
description:
  Tautomerase PptA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family.


ensembl_gene_id: LH23_17010
symbol: AIR62291.1
gene_biotype: protein_coding
description:
  Cell division protein ZipA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17020
symbol: AIR62293.1
gene_biotype: protein_coding
description:
  Bactoprenol glucosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17025
symbol: AIR62294.1
gene_biotype: protein_coding
description:
  Translocase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17030
symbol: AIR62295.1
gene_biotype: protein_coding
description:
  Periplasmic binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17035
symbol: fhuA_13
gene_biotype: protein_coding
description:
  Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17040
symbol: tyrP_3
gene_biotype: protein_coding
description:
  Tyrosine transporter TyrP; Tyrosine specific permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17065
symbol: maeA
gene_biotype: protein_coding
description:
  NAD-dependent malic enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17070
symbol: iolC_4
gene_biotype: protein_coding
description:
  Fructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17080
symbol: sacX
gene_biotype: protein_coding
description:
  PTS system sucrose-specific transporter subuits IIBC; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17085
symbol: scrB
gene_biotype: protein_coding
description:
  Glycosyl hydrolase family 32; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.


ensembl_gene_id: LH23_17090
symbol: fruR_2
gene_biotype: protein_coding
description:
  Sucrose operon repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17160
symbol: fabG_10
gene_biotype: protein_coding
description:
  3-ketoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: LH23_17175
symbol: AIR62324.1
gene_biotype: protein_coding
description:
  Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17185
symbol: tdcB_2
gene_biotype: protein_coding
description:
  Serine dehydratase; Catalyzes the formation of 2-oxobutanoate from L-threonine or the formation of pyruvate from serine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17230
symbol: AIR62335.1
gene_biotype: protein_coding
description:
  Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17255
symbol: AIR62340.1
gene_biotype: protein_coding
description:
  2-nitropropane dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17265
symbol: ywrO_4
gene_biotype: protein_coding
description:
  NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17280
symbol: AIR62345.1
gene_biotype: protein_coding
description:
  Lipoprotein YddW; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17285
symbol: leuC_2
gene_biotype: protein_coding
description:
  Isopropylmalate isomerase; Dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17290
symbol: leuD-2
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: LH23_17310
symbol: cdh_3
gene_biotype: protein_coding
description:
  Cytochrome C551; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17315
symbol: metQ-2
gene_biotype: protein_coding
description:
  DL-methionine transporter substrate-binding subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17375
symbol: AIR62361.1
gene_biotype: protein_coding
description:
  TenA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17380
symbol: AIR62362.1
gene_biotype: protein_coding
description:
  BtpA family membrane complex biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17395
symbol: AIR62365.1
gene_biotype: protein_coding
description:
  Cytochrome C peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17410
symbol: AIR62368.1
gene_biotype: protein_coding
description:
  Aryldialkylphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17415
symbol: AIR62369.1
gene_biotype: protein_coding
description:
  A4 beta-galactosidase middle domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17430
symbol: ygeW_2
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17435
symbol: dpaL_1
gene_biotype: protein_coding
description:
  Catalyzes the formation of pyruvate from 2,3-diaminopropionate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17440
symbol: argE_4
gene_biotype: protein_coding
description:
  Peptidase; Zn-dependent extracellular dipeptidase; similar to succinyl-diaminopimelate desuccinylases; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17445
symbol: hyuA_2
gene_biotype: protein_coding
description:
  Phenylhydantoinase; Catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17450
symbol: arcC1_2
gene_biotype: protein_coding
description:
  Carbamate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17465
symbol: AIR62378.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17470
symbol: gltD_3
gene_biotype: protein_coding
description:
  With YgfM and YgfN forms a selenate reductase, which seems to catalyze the reduction of selenate to selenite; YgfK mutants are unable to reduce selenate; involved in purine salvage process; seems to act as an oxidoreductase, but sequence similarity suggests it is a dihydrothymine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17475
symbol: ssnA
gene_biotype: protein_coding
description:
  Chlorohydrolase; In Escherichia coli expression is induced in response to phase-specific signals and controlled by RpoS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17480
symbol: hydN_2
gene_biotype: protein_coding
description:
  Effector protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17485
symbol: gltD_4
gene_biotype: protein_coding
description:
  (Fe-S)-binding protein; Unknown function; in E. coli the aegA gene is regulated by Fnr, NarXL, and NarQ (but not ArcA), induced under anaerobic conditions and repressed in the presence of nitrate (anaerobic); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17510
symbol: ndhS
gene_biotype: protein_coding
description:
  (2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17515
symbol: mop
gene_biotype: protein_coding
description:
  Aldehyde oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17555
symbol: hsrA_3
gene_biotype: protein_coding
description:
  Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.


ensembl_gene_id: LH23_17565
symbol: AIR62397.1
gene_biotype: protein_coding
description:
  Prolyl endopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17580
symbol: dsbG
gene_biotype: protein_coding
description:
  Involved in disulfide bond formation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17610
symbol: glsA_2
gene_biotype: protein_coding
description:
  Glutaminase; Catalyzes the formation of glutamate from glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutaminase family.


ensembl_gene_id: LH23_17635
symbol: yddE
gene_biotype: protein_coding
description:
  Isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17645
symbol: sotB_1
gene_biotype: protein_coding
description:
  Arabinose transporter; Involved in the efflux of sugars. The physiological role may be the reduction of the intracellular concentration of toxic sugars or sugar metabolites; Belongs to the major facilitator superfamily. SotB (TC 2.A.1.2) family.


ensembl_gene_id: LH23_17655
symbol: marR_2
gene_biotype: protein_coding
description:
  Transcriptional regulator; Repressor of the marRAB operon which is involved in the activation of both antibiotic resistance and oxidative stress genes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17660
symbol: marA_1
gene_biotype: protein_coding
description:
  Transcriptional activator of genes involved in the multiple antibiotic resistance (Mar) phenotype; also activates sodA, zwf and micF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17670
symbol: eamA_2
gene_biotype: protein_coding
description:
  Acetylserine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17675
symbol: AIR62418.1
gene_biotype: protein_coding
description:
  Transporter; YdeF; uncharacterized member of the major facilitator superfamily (MFS) of transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17685
symbol: livF_4
gene_biotype: protein_coding
description:
  Urea ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17695
symbol: AIR62422.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: LH23_17700
symbol: urtB
gene_biotype: protein_coding
description:
  Urea ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: LH23_17705
symbol: amiC_2
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17715
symbol: accA1
gene_biotype: protein_coding
description:
  Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17720
symbol: gatA_4
gene_biotype: protein_coding
description:
  Catalyzes the hydrolysis of allophanate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17755
symbol: AIR62434.1
gene_biotype: protein_coding
description:
  1,4-alpha-glucan branching protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17770
symbol: AIR62437.1
gene_biotype: protein_coding
description:
  NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17775
symbol: AIR62438.1
gene_biotype: protein_coding
description:
  ssrAB activated gene; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17780
symbol: AIR62439.1
gene_biotype: protein_coding
description:
  Virulence factor SrfB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17810
symbol: AIR62445.1
gene_biotype: protein_coding
description:
  Esterase-like activity of phytase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17825
symbol: dbpA_3
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase DbpA; Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17860
symbol: AIR62454.1
gene_biotype: protein_coding
description:
  Agmatinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17865
symbol: AIR62455.1
gene_biotype: protein_coding
description:
  Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17870
symbol: AIR62456.1
gene_biotype: protein_coding
description:
  2OG-Fe(II) oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17875
symbol: AIR62457.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17890
symbol: AIR62460.1
gene_biotype: protein_coding
description:
  2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17895
symbol: umuC
gene_biotype: protein_coding
description:
  DNA polymerase V subunit UmuC; Binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17900
symbol: umuD
gene_biotype: protein_coding
description:
  Binds with UmuC protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S24 family.


ensembl_gene_id: LH23_17905
symbol: AIR62463.1
gene_biotype: protein_coding
description:
  Prolyl oligopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17920
symbol: ttcA
gene_biotype: protein_coding
description:
  tRNA 2-thiocytidine biosynthesis protein TtcA; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.


ensembl_gene_id: LH23_17925
symbol: zntB
gene_biotype: protein_coding
description:
  Zinc transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17945
symbol: AIR62470.1
gene_biotype: protein_coding
description:
  Murein peptide amidase A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17950
symbol: ycjG_2
gene_biotype: protein_coding
description:
  L-alanine-DL-glutamate epimerase; Catalyzes the epimerization of L-alanyl-D-glutamate to L-alanyl-L-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mandelate racemase/muconate lactonizing enzyme family.


ensembl_gene_id: LH23_17955
symbol: tpx
gene_biotype: protein_coding
description:
  Peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.


ensembl_gene_id: LH23_17975
symbol: tyrR_3
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates genes involved in the biosynthesis and transport of aromatic amino acids; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17990
symbol: AIR62478.1
gene_biotype: protein_coding
description:
  Phage-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_17995
symbol: pspC
gene_biotype: protein_coding
description:
  Transcriptional regulator; With PsbB forms toxin/antitoxin pair; activates the psp operon in response to phage infection, exposure to ethanol or osmotic shock; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18000
symbol: pspB
gene_biotype: protein_coding
description:
  Phage shock protein; DNA-binding transcriptional regulator; acts together with PspC to induce psp operon during infection with phage, exposure to ethanol or osmotic shock; forms a complex with PspA and C; PspC is required for PspAB binding; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18005
symbol: pspA
gene_biotype: protein_coding
description:
  Phage shock protein; Involved in maintaining membrane potential under membrane stress conditions; also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18010
symbol: pspF
gene_biotype: protein_coding
description:
  Phage shock protein; Transcriptional activator for pspABCE which are induced in response to phage proteins, membrane altering stresses, and impaired proton expor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18030
symbol: gsiA_17
gene_biotype: protein_coding
description:
  Peptide ABC transporter ATP-binding protein; Involved in resistance to antimibial peptides; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: LH23_18040
symbol: fabI
gene_biotype: protein_coding
description:
  enoyl-ACP reductase; Catalyzes a key regulatory step in fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18050
symbol: rnb
gene_biotype: protein_coding
description:
  Exoribonuclease II; Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction.


ensembl_gene_id: LH23_18055
symbol: gmr_1
gene_biotype: protein_coding
description:
  RNase II stability modulator; c-di-GMP phosphodiesterase; probably degrades signalling molecule c-di-GMP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18060
symbol: echA8_1
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase; Regulator of pathogenicity factor RpfF; involved in synthesis of a diffusible signal factor involved in the regulation of extracellular enzymes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18075
symbol: rcnR
gene_biotype: protein_coding
description:
  Transcriptional repressor RcnR to maintain nickel and cobalt homeostasis; DNA-binding; binds the RcnA promotor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18080
symbol: fsa
gene_biotype: protein_coding
description:
  Fructose-6-phosphate aldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: LH23_18085
symbol: hpdA
gene_biotype: protein_coding
description:
  Pyruvate formate lyase-activating protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18090
symbol: csdB
gene_biotype: protein_coding
description:
  Formate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18105
symbol: yciH
gene_biotype: protein_coding
description:
  Translation initiation factor Sui1; Involved in start site selection during the initiation of translation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18110
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: LH23_18115
symbol: lapB
gene_biotype: protein_coding
description:
  Tetratricopeptide repeat protein; Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane; Belongs to the LapB family.


ensembl_gene_id: LH23_18125
symbol: pgpB
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18130
symbol: ribA
gene_biotype: protein_coding
description:
  GTP cyclohydrolase; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate.


ensembl_gene_id: LH23_18150
symbol: cysB
gene_biotype: protein_coding
description:
  LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18155
symbol: topA_2
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: LH23_18165
symbol: AIR62511.1
gene_biotype: protein_coding
description:
  Peptidase; Multicopy suppressor of htrA(degP); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18170
symbol: yciK_2
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18175
symbol: btuR_1
gene_biotype: protein_coding
description:
  cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase; Catalyzes the formation of adenosylcobalamide from cobinamide and the formation of coenzyme B12 from cob(I)alamin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18180
symbol: rluB_1
gene_biotype: protein_coding
description:
  23S rRNA pseudouridylate synthase; Catalyzes the synthesis of pseudouridine from uracil-2605 in 23S ribosomal RNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: LH23_18190
symbol: yciO
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SUA5 family.


ensembl_gene_id: LH23_18195
symbol: AIR62517.1
gene_biotype: protein_coding
description:
  S-adenosylmethionine tRNA ribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18200
symbol: trpE_2
gene_biotype: protein_coding
description:
  With component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18205
symbol: trpD_2
gene_biotype: protein_coding
description:
  Glutamine amidotransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: LH23_18210
symbol: trpC_4
gene_biotype: protein_coding
description:
  Indole-3-glycerol phosphate synthase; Monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TrpF family.


ensembl_gene_id: LH23_18215
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: LH23_18220
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: LH23_18230
symbol: ompW
gene_biotype: protein_coding
description:
  Membrane protein; Receptor for colicin S4; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18245
symbol: yciB_2
gene_biotype: protein_coding
description:
  Intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.


ensembl_gene_id: LH23_18280
symbol: AIR62532.1
gene_biotype: protein_coding
description:
  Zinc ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18355
symbol: tonB
gene_biotype: protein_coding
description:
  Energy transducer TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.


ensembl_gene_id: LH23_18360
symbol: yciI
gene_biotype: protein_coding
description:
  Hypothetical protein; Unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18380
symbol: cls
gene_biotype: protein_coding
description:
  Cardiolipin synthetase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.


ensembl_gene_id: LH23_18385
symbol: yciU
gene_biotype: protein_coding
description:
  Highly acidic protein; the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi); binds heat-unstable protein (HU-alpha) which is a histone-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0263 family.


ensembl_gene_id: LH23_18395
symbol: gsiA_20
gene_biotype: protein_coding
description:
  Peptide ABC transporter ATP-binding protein; With OppABCD is involved in the transport of oligopeptides; OppF and OppD are ATP-binding proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18400
symbol: oppD
gene_biotype: protein_coding
description:
  Oligopeptide transporter ATP-binding component; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: LH23_18405
symbol: oppC_3
gene_biotype: protein_coding
description:
  Peptide ABC transporter permease; With OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18410
symbol: oppB
gene_biotype: protein_coding
description:
  Oligopeptide transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18425
symbol: adhE_4
gene_biotype: protein_coding
description:
  Acetaldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18430
symbol: tdk
gene_biotype: protein_coding
description:
  Thymidine kinase; Catalyzes the formation of thymidine 5'-phosphate from thymidine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18445
symbol: tuaD_2
gene_biotype: protein_coding
description:
  UDP-glucose 6-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18450
symbol: galU_2
gene_biotype: protein_coding
description:
  Together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase, an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate; regulates cellular levels of UDP-glucose; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18455
symbol: hnr
gene_biotype: protein_coding
description:
  Response regulator of RpoS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18465
symbol: ychJ
gene_biotype: protein_coding
description:
  SEC-C domain-containing protein domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0225 family.


ensembl_gene_id: LH23_18470
symbol: purU
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).


ensembl_gene_id: LH23_18485
symbol: sigM_2
gene_biotype: protein_coding
description:
  RNA polymerase sigma 70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: LH23_18490
symbol: arsD
gene_biotype: protein_coding
description:
  Arsenic resistance operon repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18495
symbol: arsA_1
gene_biotype: protein_coding
description:
  Arsenic ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18500
symbol: crcB_2
gene_biotype: protein_coding
description:
  Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity.


ensembl_gene_id: LH23_18505
symbol: AIR62572.1
gene_biotype: protein_coding
description:
  Enolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18510
symbol: AIR62573.1
gene_biotype: protein_coding
description:
  Universal stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18515
symbol: AIR62574.1
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18520
symbol: arsC
gene_biotype: protein_coding
description:
  Arsenate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18525
symbol: arsB
gene_biotype: protein_coding
description:
  Arsenical pump membrane protein; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family.


ensembl_gene_id: LH23_18530
symbol: aseR
gene_biotype: protein_coding
description:
  ArsR family transcriptional regulator; Regulates the expression of of the arsRBC involved in resistance to arsenic; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18535
symbol: narI
gene_biotype: protein_coding
description:
  Nitrate reductase; With NarGJH catalyzes the reduction of nitrate; the gamma subunit localizes NarGHI to the membrane; one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18540
symbol: narJ
gene_biotype: protein_coding
description:
  Delta subunit of nitrate reductase 1; chaperone for the insertion of the molybdenum cofactor and assembly of nitrate reductase 1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18545
symbol: narH
gene_biotype: protein_coding
description:
  Nitrate reductase; With NarGJI catalyzes the reduction of nitrate; the beta subunit is an iron sulfur cluster containing electron transfer subunit; one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18550
symbol: narZ
gene_biotype: protein_coding
description:
  Nitrate reductase; With NarYV catalyzes the reduction of nitrate; the beta subunit is an iron sulfur cluster containing electron transfer subunit; one of 3 nitrate reductases in E. coli; expression of nitrate reductase Z is not dependent on nitrate levels; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18555
symbol: narK_1
gene_biotype: protein_coding
description:
  Nitrate/nitrite transporter NarK; Involved in the transport of nitrate and nitrite; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18560
symbol: narX_2
gene_biotype: protein_coding
description:
  Nitrate/nitrite sensor protein NarX; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18565
symbol: narL_2
gene_biotype: protein_coding
description:
  Two-component response regulator NarL; phosphorylated by NarQ; activates transcription of nitrate and nitrite reductase genes and represses transcription of fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18570
symbol: AIR62585.1
gene_biotype: protein_coding
description:
  Invasin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18590
symbol: AIR62589.1
gene_biotype: protein_coding
description:
  Transporter; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.


ensembl_gene_id: LH23_18595
symbol: chaA
gene_biotype: protein_coding
description:
  Calcium/sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18600
symbol: kdsA
gene_biotype: protein_coding
description:
  2-dehydro-3-deoxyphosphooctonate aldolase; Catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the KdsA family.


ensembl_gene_id: LH23_18610
symbol: sirB2
gene_biotype: protein_coding
description:
  Siroheme synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18615
symbol: prmC
gene_biotype: protein_coding
description:
  SAM-dependent methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: LH23_18620
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: LH23_18625
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18630
symbol: lolB
gene_biotype: protein_coding
description:
  Outer membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.


ensembl_gene_id: LH23_18635
symbol: ispE
gene_biotype: protein_coding
description:
  Kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. Belongs to the GHMP kinase family. IspE subfamily.


ensembl_gene_id: LH23_18640
symbol: prs_1
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18645
symbol: ychM_2
gene_biotype: protein_coding
description:
  Transporter; Role in sulfate transport across the inner membrane; member of the SulP family of sulfate transporters; seems to mediate transport via sulfate/proton symport; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18650
symbol: AIR62601.1
gene_biotype: protein_coding
description:
  4-oxalocrotonate tautomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family.


ensembl_gene_id: LH23_18655
symbol: kduD_2
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: LH23_18665
symbol: tipA
gene_biotype: protein_coding
description:
  MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18670
symbol: AIR62605.1
gene_biotype: protein_coding
description:
  Hypothetical protein; YchH; transcription activated by CRP (cyclic AMP receptor protein), a global transcription factor involved in regulation of metabolism in enteric bacteria; ychH presents a class II promoter to bind CRP; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18675
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: LH23_18680
symbol: ychF
gene_biotype: protein_coding
description:
  GTP-binding protein; EngD; translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18705
symbol: AIR62612.1
gene_biotype: protein_coding
description:
  Archaeal ATPase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18710
symbol: AIR62613.1
gene_biotype: protein_coding
description:
  adenosine/AMP deaminase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18765
symbol: AIR62623.1
gene_biotype: protein_coding
description:
  Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18795
symbol: atzA
gene_biotype: protein_coding
description:
  Catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18800
symbol: hutC
gene_biotype: protein_coding
description:
  Histidine utilization repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18810
symbol: echA8_2
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: LH23_18815
symbol: fadB2
gene_biotype: protein_coding
description:
  3-hydroxybutyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18820
symbol: frc_2
gene_biotype: protein_coding
description:
  acyl-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CoA-transferase III family.


ensembl_gene_id: LH23_18825
symbol: hutH_1
gene_biotype: protein_coding
description:
  Histidine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18850
symbol: hutU_2
gene_biotype: protein_coding
description:
  Urocanate hydratase; Catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18855
symbol: hutI_2
gene_biotype: protein_coding
description:
  Imidazolonepropionase; Catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18860
symbol: AIR62642.1
gene_biotype: protein_coding
description:
  N-formylglutamate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18875
symbol: mqo_5
gene_biotype: protein_coding
description:
  Malate:quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18910
symbol: pknK
gene_biotype: protein_coding
description:
  Nuclease PIN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18915
symbol: AIR62653.1
gene_biotype: protein_coding
description:
  Merozoite surface protein 3b; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18930
symbol: treA
gene_biotype: protein_coding
description:
  Trehalase; Periplasmic; catalyzes the hydrolysis of trehalose to glucose which can then be imported into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18935
symbol: fhuA_7
gene_biotype: protein_coding
description:
  Ferrioxamine B receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18945
symbol: ycgR
gene_biotype: protein_coding
description:
  Flagellar brake protein; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)-dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility.


ensembl_gene_id: LH23_18950
symbol: emtA
gene_biotype: protein_coding
description:
  Lytic murein transglycosylase; Catalyzes the cleavage of 1-4 beta-glycoside linkaged between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18955
symbol: ldcA_2
gene_biotype: protein_coding
description:
  Peptidase S66; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18960
symbol: cvrA
gene_biotype: protein_coding
description:
  Potassium/proton antiporter; The Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.


ensembl_gene_id: LH23_18965
symbol: alr-2
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: LH23_18975
symbol: AIR62665.1
gene_biotype: protein_coding
description:
  SpoVR family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_18985
symbol: nhaB
gene_biotype: protein_coding
description:
  Sodium/proton antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaB Na(+)/H(+) (TC 2.A.34) antiporter family.


ensembl_gene_id: LH23_18990
symbol: dsbB
gene_biotype: protein_coding
description:
  Disulfide bond formation protein B; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family.


ensembl_gene_id: LH23_19005
symbol: AIR62671.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0260 family.


ensembl_gene_id: LH23_19025
symbol: minC
gene_biotype: protein_coding
description:
  Septum formation inhibitor; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: LH23_19030
symbol: minD
gene_biotype: protein_coding
description:
  ATPase; with MinC inhibits cell division by blocking formation of the polar Z ring septums; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19035
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: LH23_19045
symbol: fadD
gene_biotype: protein_coding
description:
  Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19060
symbol: dinG-2
gene_biotype: protein_coding
description:
  ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19070
symbol: AIR62684.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0181 family.


ensembl_gene_id: LH23_19075
symbol: pabB
gene_biotype: protein_coding
description:
  Para-aminobenzoate synthase component 1; catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and L-glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19100
symbol: ycgG_3
gene_biotype: protein_coding
description:
  c-di-GMP phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19110
symbol: manX_3
gene_biotype: protein_coding
description:
  PTS mannose transporter subunit IIAB; Catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; subunit IIA transfers a phosphoryl group to subunit IIB; subunit IIB transfers the phosphoryl group to the substrate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19115
symbol: manY
gene_biotype: protein_coding
description:
  PTS mannose transporter subunit IIC; Catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19120
symbol: manZ_3
gene_biotype: protein_coding
description:
  PTS mannose transporter subunit IID; Hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IID with IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19130
symbol: yebN
gene_biotype: protein_coding
description:
  Hypothetical protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.


ensembl_gene_id: LH23_19135
symbol: rrmA
gene_biotype: protein_coding
description:
  Methylates the guanosine in position 745 of 23S rRNA; required for translation and cell growth; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19140
symbol: ftsI_7
gene_biotype: protein_coding
description:
  Peptidoglycan synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19165
symbol: kdgR
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates the genes involved in 2-keto-3-deoxy gluconate transport and catabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19170
symbol: hsrA_4
gene_biotype: protein_coding
description:
  Multidrug MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19175
symbol: htpX
gene_biotype: protein_coding
description:
  Heat shock protein HtpX; Metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M48B family.


ensembl_gene_id: LH23_19180
symbol: prc_1
gene_biotype: protein_coding
description:
  Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family.


ensembl_gene_id: LH23_19185
symbol: proQ
gene_biotype: protein_coding
description:
  Prop expression regulator; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities. May regulate ProP activity through an RNA-based, post-transcriptional mechanism. Belongs to the ProQ family.


ensembl_gene_id: LH23_19190
symbol: msrC
gene_biotype: protein_coding
description:
  Free methionine-R-sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19205
symbol: yebU
gene_biotype: protein_coding
description:
  RNA methyltransferase RsmF; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA.


ensembl_gene_id: LH23_19250
symbol: holE
gene_biotype: protein_coding
description:
  DNA polymerase III subunit theta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19255
symbol: AIR62721.1
gene_biotype: protein_coding
description:
  Carbon-nitrogen hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19260
symbol: exoX
gene_biotype: protein_coding
description:
  3'-5' exonuclease activity on single or double-strand DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19275
symbol: AIR62725.1
gene_biotype: protein_coding
description:
  LexA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19280
symbol: purT
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family.


ensembl_gene_id: LH23_19285
symbol: eda
gene_biotype: protein_coding
description:
  Keto-deoxy-phosphogluconate aldolase; Catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19290
symbol: ilvD_3
gene_biotype: protein_coding
description:
  Phosphogluconate dehydratase; Catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IlvD/Edd family.


ensembl_gene_id: LH23_19295
symbol: zwf_1
gene_biotype: protein_coding
description:
  Glucose-6-phosphate dehydrogenase; Catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19300
symbol: ybbH_2
gene_biotype: protein_coding
description:
  Transcriptional regulator; Represses the expression of the zwf, eda, glp and gap; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19315
symbol: msrA_2
gene_biotype: protein_coding
description:
  Methionine sulfoxide reductase A; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MsrA Met sulfoxide reductase family.


ensembl_gene_id: LH23_19320
symbol: msbB_2
gene_biotype: protein_coding
description:
  Transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19325
symbol: lytM
gene_biotype: protein_coding
description:
  Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19330
symbol: znuA
gene_biotype: protein_coding
description:
  Zinc ABC transporter substrate-binding protein; Involved in transport of zinc(II) with ZnuA and C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19335
symbol: znuC
gene_biotype: protein_coding
description:
  Zinc ABC transporter ATPase; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.


ensembl_gene_id: LH23_19340
symbol: znuB
gene_biotype: protein_coding
description:
  High-affinity zinc transporter membrane component; Involved in transport of zinc(II) with ZnuA and C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19345
symbol: ruvB
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: LH23_19350
symbol: ruvA
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: LH23_19355
symbol: ruvC
gene_biotype: protein_coding
description:
  Holliday junction resolvase; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: LH23_19365
symbol: nudB
gene_biotype: protein_coding
description:
  Catalyzes the formation of dihydroneopterin phosphate from dihydroneopterin triphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19370
symbol: aspS_3
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: LH23_19390
symbol: cmoA
gene_biotype: protein_coding
description:
  tRNA methyltransferase; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM).


ensembl_gene_id: LH23_19395
symbol: cmoB
gene_biotype: protein_coding
description:
  tRNA methyltransferase; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs.


ensembl_gene_id: LH23_19405
symbol: cutC
gene_biotype: protein_coding
description:
  Copper homeostasis protein CutC; Participates in the control of copper homeostasis. Belongs to the CutC family.


ensembl_gene_id: LH23_19410
symbol: patB
gene_biotype: protein_coding
description:
  Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19420
symbol: argS
gene_biotype: protein_coding
description:
  arginyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19425
symbol: flhE
gene_biotype: protein_coding
description:
  Flagellar protein flhE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19430
symbol: flhA_2
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: LH23_19435
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhB; Membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19440
symbol: cheZ
gene_biotype: protein_coding
description:
  Chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).


ensembl_gene_id: LH23_19445
symbol: cheY
gene_biotype: protein_coding
description:
  Chemotaxis protein CheY; Chemotaxis regulator that, when phosphorylated, interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19450
symbol: cheB_1
gene_biotype: protein_coding
description:
  Chemotaxis protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: LH23_19455
symbol: cheR_1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheR; Methylates the MCP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19460
symbol: tap_4
gene_biotype: protein_coding
description:
  Methyl-accepting protein IV; Mediates taxis toward dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19470
symbol: AIR62764.1
gene_biotype: protein_coding
description:
  Spore coat protein U; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19480
symbol: AIR62766.1
gene_biotype: protein_coding
description:
  Pilus assembly protein PapD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19485
symbol: AIR62767.1
gene_biotype: protein_coding
description:
  Spore coat U domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19490
symbol: gltP_2
gene_biotype: protein_coding
description:
  C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: LH23_19495
symbol: cheW
gene_biotype: protein_coding
description:
  Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19500
symbol: cheA
gene_biotype: protein_coding
description:
  Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19505
symbol: motB
gene_biotype: protein_coding
description:
  Flagellar motor protein MotB; With MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19515
symbol: flhC
gene_biotype: protein_coding
description:
  Transcriptional regulator; Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhC family.


ensembl_gene_id: LH23_19520
symbol: flhD
gene_biotype: protein_coding
description:
  Transcriptional regulator; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhD family.


ensembl_gene_id: LH23_19525
symbol: uspA_2
gene_biotype: protein_coding
description:
  Universal stress protein UspC; Required for resistance to DNA-damaging agents. Belongs to the universal stress protein A family.


ensembl_gene_id: LH23_19555
symbol: gsiC_2
gene_biotype: protein_coding
description:
  Peptide permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19575
symbol: AIR62784.1
gene_biotype: protein_coding
description:
  Outer membrane lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19585
symbol: AIR62786.1
gene_biotype: protein_coding
description:
  Ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19610
symbol: AIR62789.1
gene_biotype: protein_coding
description:
  Muraminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19640
symbol: pgsA
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphate synthetase; This protein catalyzes the committed step to the synthesis of the acidic phospholipids; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: LH23_19645
symbol: uvrC
gene_biotype: protein_coding
description:
  The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19650
symbol: sirA
gene_biotype: protein_coding
description:
  Response regulator; In Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system; in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19665
symbol: frc_1
gene_biotype: protein_coding
description:
  CAIB/BAIF family CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CoA-transferase III family.


ensembl_gene_id: LH23_19670
symbol: artM_7
gene_biotype: protein_coding
description:
  Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19680
symbol: dcyD_1
gene_biotype: protein_coding
description:
  Cysteine desulfhydrase; Catalyzes the alpha,beta-elimination reaction of D-cysteine and of several D-cysteine derivatives. It could be a defense mechanism against D-cysteine; Belongs to the ACC deaminase/D-cysteine desulfhydrase family.


ensembl_gene_id: LH23_19685
symbol: fliY_3
gene_biotype: protein_coding
description:
  Cystine transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19690
symbol: AIR62800.1
gene_biotype: protein_coding
description:
  Flagella biosynthesis protein FliZ; Expression activator of the class 2 type of flagellar operons, essential to achieve maximal cell motility; activator of type 1 fimbrial gene expression; cell density-responsive regulator; FliZ in Salmonella typhimurium induces HilA, an activator of invasion genes necessary to achieve full virulence; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19695
symbol: fliA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.


ensembl_gene_id: LH23_19700
symbol: AIR62802.1
gene_biotype: protein_coding
description:
  ATP-dependent carboxylate-amine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19705
symbol: AIR62803.1
gene_biotype: protein_coding
description:
  Methyltransferase domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19710
symbol: arnB_2
gene_biotype: protein_coding
description:
  Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: LH23_19730
symbol: fliD_2
gene_biotype: protein_coding
description:
  Flagellar cap protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: LH23_19735
symbol: fliS
gene_biotype: protein_coding
description:
  Flagellar protein FliS; Flagellin specific chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19740
symbol: fliT
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliT; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19745
symbol: amyS
gene_biotype: protein_coding
description:
  Cytoplasmic alpha-amylase; Converts 1,4-alpha-D-glucans to maltodextrin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19785
symbol: fliF_3
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19805
symbol: fliJ
gene_biotype: protein_coding
description:
  Flagellar biosynthesis chaperone; Flagellar protein that affects chemotactic events. Belongs to the FliJ family.


ensembl_gene_id: LH23_19810
symbol: fliK
gene_biotype: protein_coding
description:
  Flagellar hook-length control protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19815
symbol: fliL
gene_biotype: protein_coding
description:
  Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: LH23_19820
symbol: fliM
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliM; With FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19825
symbol: fliN
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.


ensembl_gene_id: LH23_19830
symbol: fliO
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliO; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19835
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein flip; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: LH23_19850
symbol: rcsA
gene_biotype: protein_coding
description:
  Capsule biosynthesis protein CapA; With RcsB is a positive regulator of capsular polysaccharide synthesis genes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19855
symbol: AIR62831.1
gene_biotype: protein_coding
description:
  Aspartyl beta-hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19860
symbol: dsrB
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DsrB family.


ensembl_gene_id: LH23_19870
symbol: ycdT_2
gene_biotype: protein_coding
description:
  Diguanylate cyclase; Catalyzes the formation of cyclic di-3',5'-guanylate from guanosine triphosphate; involved in the regulation of cellulose biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19885
symbol: yedA
gene_biotype: protein_coding
description:
  Multidrug DMT transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19890
symbol: vsr
gene_biotype: protein_coding
description:
  Very short patch repair endonuclease; May nick specific sequences that contain T:G mispairs resulting from m5C-deamination.


ensembl_gene_id: LH23_19895
symbol: dcm
gene_biotype: protein_coding
description:
  DNA cytosine methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19905
symbol: fryA_2
gene_biotype: protein_coding
description:
  PTS fructose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: LH23_19910
symbol: mngB_1
gene_biotype: protein_coding
description:
  Sugar hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19915
symbol: fruA_1
gene_biotype: protein_coding
description:
  PTS mannose transporter subunit IIAB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19920
symbol: hrsA
gene_biotype: protein_coding
description:
  PTS sugar transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19950
symbol: AIR62850.1
gene_biotype: protein_coding
description:
  Na/Pi cotransporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19965
symbol: fliY_2
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: LH23_19985
symbol: czcO_1
gene_biotype: protein_coding
description:
  FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_19995
symbol: AIR62857.1
gene_biotype: protein_coding
description:
  Major pilin protein fimA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20000
symbol: argE_2
gene_biotype: protein_coding
description:
  Acetylornithine deacetylase; Catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20020
symbol: AIR62862.1
gene_biotype: protein_coding
description:
  Barnase inhibitor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20130
symbol: AIR62875.1
gene_biotype: protein_coding
description:
  ShlB/FhaC/HecB family hemolysin secretion/activation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20140
symbol: mtfA
gene_biotype: protein_coding
description:
  DgsA anti-repressor MtfA; Involved in the regulation of ptsG expression by binding and inactivating Mlc.


ensembl_gene_id: LH23_20175
symbol: AIR62882.1
gene_biotype: protein_coding
description:
  Cyclopropane-fatty-acyl-phospholipid synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20180
symbol: AIR62883.1
gene_biotype: protein_coding
description:
  Plasmid partition ParA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20215
symbol: tenA
gene_biotype: protein_coding
description:
  Thiaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20220
symbol: ssuB_3
gene_biotype: protein_coding
description:
  ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20230
symbol: AIR62893.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20245
symbol: cbl
gene_biotype: protein_coding
description:
  LysR-type transcriptional regulator similar to CysB; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates two operons consisting of ABC transporters that are part of the cys regulon; regulated by CysB; DNA-binding transcriptional activator for the ssuEADCB and tauABCD operons; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20250
symbol: AIR62897.1
gene_biotype: protein_coding
description:
  Nitrogen assimilation transcriptional regulator; Transcriptional activator for the hut, put and ure operons and repressor for the gdh and gltB operons in response to nitrogen limitation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20255
symbol: resA
gene_biotype: protein_coding
description:
  Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20260
symbol: AIR62899.1
gene_biotype: protein_coding
description:
  DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20265
symbol: dsbD_4
gene_biotype: protein_coding
description:
  Protein-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20270
symbol: AIR62901.1
gene_biotype: protein_coding
description:
  Copper resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20280
symbol: esaI
gene_biotype: protein_coding
description:
  N-acyl homoserine lactone synthase CroI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20290
symbol: nfnB
gene_biotype: protein_coding
description:
  Dihydropteridine reductase; Catalyzes the reduction of nitroaromatic compounds such as nitrofurazone, quinones and the anti-tumor agent CB1954; NAD(P)H-dependent; oxygen insensitive; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20300
symbol: AIR62906.1
gene_biotype: protein_coding
description:
  NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.


ensembl_gene_id: LH23_20315
symbol: amn
gene_biotype: protein_coding
description:
  AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations.


ensembl_gene_id: LH23_20320
symbol: AIR62910.1
gene_biotype: protein_coding
description:
  X-Pro aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20330
symbol: AIR62911.1
gene_biotype: protein_coding
description:
  Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20335
symbol: puuP_1
gene_biotype: protein_coding
description:
  Putrescine importer PuuP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20340
symbol: puuA_2
gene_biotype: protein_coding
description:
  Gamma-glutamylputrescine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamine synthetase family.


ensembl_gene_id: LH23_20345
symbol: puuD
gene_biotype: protein_coding
description:
  Gamma-glutamyl-gamma-aminobutyrate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20350
symbol: puuR
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates genes involved in putrescine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20360
symbol: puuB_1
gene_biotype: protein_coding
description:
  Gamma-glutamylputrescine oxidoreductase; Catalyzes the formation of gamma-glutamyl-gamma-aminobutyraldehyde from gamma-glutamylputrescine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20370
symbol: erfK
gene_biotype: protein_coding
description:
  L,D-transpeptidase; Catalyzes th removal of D-alanine and attachment of the murein lipoprotein to the peptidoglycan tetrapeptide chain; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20375
symbol: mscM
gene_biotype: protein_coding
description:
  Miniconductance mechanosensitive channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20405
symbol: AIR62925.1
gene_biotype: protein_coding
description:
  DNA alkylation repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20415
symbol: AIR62927.1
gene_biotype: protein_coding
description:
  Cyclic nucleotide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20460
symbol: higA_3
gene_biotype: protein_coding
description:
  Cro/Cl family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20465
symbol: AIR62936.1
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20480
symbol: yeeX
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0265 family.


ensembl_gene_id: LH23_20495
symbol: sbmC
gene_biotype: protein_coding
description:
  DNA gyrase inhibitor; Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell.


ensembl_gene_id: LH23_20510
symbol: sbcB
gene_biotype: protein_coding
description:
  Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20515
symbol: plaP_3
gene_biotype: protein_coding
description:
  Putrescine/spermidine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20535
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity.


ensembl_gene_id: LH23_20540
symbol: hisD
gene_biotype: protein_coding
description:
  Catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20545
symbol: hisC_1
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase; Catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20550
symbol: hisB_2
gene_biotype: protein_coding
description:
  Imidazoleglycerol-phosphate dehydratase; Catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the imidazoleglycerol-phosphate dehydratase family.


ensembl_gene_id: LH23_20555
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase; With HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; Derived by automated computational analysis using gene prediction method: Protein H [...]


ensembl_gene_id: LH23_20560
symbol: AIR62955.1
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20565
symbol: hisF_1
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: LH23_20570
symbol: hisE
gene_biotype: protein_coding
description:
  phosphoribosyl-ATP pyrophosphatase; Catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PRA-PH family.


ensembl_gene_id: LH23_20580
symbol: AIR62959.1
gene_biotype: protein_coding
description:
  Chain length determinant protein WzzB; Regulator of length of O-antigen component of lipopolysaccharide chains; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20585
symbol: gnd
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.


ensembl_gene_id: LH23_20590
symbol: AIR62961.1
gene_biotype: protein_coding
description:
  Phosphomannomutase; Capsular polysaccharide biosynthesis protein; catalyzes the formation of D-mannose 6-phosphate from alpha-D-mannose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20595
symbol: cpsB
gene_biotype: protein_coding
description:
  Mannose-1-phosphate guanyltransferase; Capsular polysaccharide colanic acid biosynthesis protein; catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20600
symbol: AIR62963.1
gene_biotype: protein_coding
description:
  Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20620
symbol: AIR62967.1
gene_biotype: protein_coding
description:
  Polysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20625
symbol: AIR62968.1
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20630
symbol: AIR62969.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20635
symbol: AIR62970.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20655
symbol: galF
gene_biotype: protein_coding
description:
  UTP--glucose-1-phosphate uridylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20660
symbol: wcaM
gene_biotype: protein_coding
description:
  Colanic acid biosynthesis protein; WcaM from Salmonella enterica is essential for biofilm formation on HEp-2 cells and chicken intestinal tissue but not on a plastic surface; may be involved in the biosynthesis of colanic acid; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20665
symbol: pimB
gene_biotype: protein_coding
description:
  Colanic acid biosynthesis glycosyltransferase WcaL; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20670
symbol: AIR62977.1
gene_biotype: protein_coding
description:
  Colanic acid biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20675
symbol: wzxC_1
gene_biotype: protein_coding
description:
  Colanic acid exporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20680
symbol: wcaJ_2
gene_biotype: protein_coding
description:
  UDP-glucose lipid carrier transferase; WcaJ; glucose-1-phosphate transferase responsible for the addition of the first glucose-1-phosphate from UDP-glucose to the lipid carrier undecaprenyl phosphate in the biosynthesis of colanic acid; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20685
symbol: algC
gene_biotype: protein_coding
description:
  Phosphomannomutase; Capsular polysaccharide biosynthesis protein; catalyzes the formation of D-mannose 6-phosphate from alpha-D-mannose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphohexose mutase family.


ensembl_gene_id: LH23_20690
symbol: cpsB-2
gene_biotype: protein_coding
description:
  Mannose-1-phosphate guanyltransferase; Capsular polysaccharide colanic acid biosynthesis protein; catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mannose-6-phosphate isomerase type 2 family.


ensembl_gene_id: LH23_20700
symbol: gmm
gene_biotype: protein_coding
description:
  GDP-mannose mannosyl hydrolase; Catalyzes the formation of GDP and D-mannose from GDP-D-mannose; also hydrolyzes GDP-glucose; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20705
symbol: fcl
gene_biotype: protein_coding
description:
  GDP-fucose synthetase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.


ensembl_gene_id: LH23_20710
symbol: gmd
gene_biotype: protein_coding
description:
  GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.


ensembl_gene_id: LH23_20715
symbol: wcaF
gene_biotype: protein_coding
description:
  Acyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20720
symbol: wcaE
gene_biotype: protein_coding
description:
  Colanic acid biosynthesis glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20725
symbol: wcaD
gene_biotype: protein_coding
description:
  Essential for colanic acid biosynthesis; colanic acid is an exopolysaccharide produced under stress conditions that confers acid and heat tolerance; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20735
symbol: cysE_4
gene_biotype: protein_coding
description:
  Acetyltransferase believed to catalyze the addition of the acetyl group that is attached through an O linkage to the first fucosyl residue of the colanic acid repetitive unit (E unit); wcaB is induced in sessile bacteria and by osmotic shock, and repressed when grown in rich medium; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20745
symbol: wzc_1
gene_biotype: protein_coding
description:
  Tyrosine protein kinase; Wzc; catalyzes the autophosphorylation on tyrosine residues which downregulates the biosynthesis of colonic acid (an extracellular polysaccharide); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20750
symbol: wzb
gene_biotype: protein_coding
description:
  Protein tyrosine phosphatase; Wzb shows phosphatase activity towards the autophosphorylated Wzc protein, which induces colanic acid biosynthesis; catalyzes the phosphorylation of UDP-glucose dehydrogenase, an enzyme involved in colanic acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: LH23_20755
symbol: AIR62994.1
gene_biotype: protein_coding
description:
  Polysaccharide export protein Wza; Required for the translocation of capsular polysaccharide through the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20765
symbol: AIR62996.1
gene_biotype: protein_coding
description:
  YegA; inner membrane protein involved in the assembly of outer membrane proteins (OMPs); asmA-null mutants show low lipopolysaccharide (LPS) levels, suggesting a role in LPS biogenesis and/or in restricting outer membrane fluidity, resulting on altered assembly of OMPs; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20775
symbol: udk
gene_biotype: protein_coding
description:
  Uridine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20785
symbol: alkA
gene_biotype: protein_coding
description:
  3-methyladenine DNA glycosylase; Inducible, catalyzes the hydrolysis of alkylated DNA, releasing 3-methyladenine, 3-methylguanine, 7-methylguanine and 7-methyladenine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20790
symbol: dnaK_3
gene_biotype: protein_coding
description:
  Chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20800
symbol: AIR63003.1
gene_biotype: protein_coding
description:
  Toxin RelE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20805
symbol: bepD
gene_biotype: protein_coding
description:
  Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: LH23_20810
symbol: mdtC_2
gene_biotype: protein_coding
description:
  Multidrug transporter; Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: LH23_20815
symbol: mdtC_1
gene_biotype: protein_coding
description:
  Multidrug transporter; Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. MdtC subfamily.


ensembl_gene_id: LH23_20830
symbol: baeR_2
gene_biotype: protein_coding
description:
  Response regulator in two-component regulatory system with BaeS; regulator of RNA synthesis, flagellar biosynthesis, chemotaxis and transport; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20845
symbol: yegS
gene_biotype: protein_coding
description:
  Lipid kinase; Probably phosphorylates lipids; the in vivo substrate is unknown; Belongs to the diacylglycerol/lipid kinase family. YegS lipid kinase subfamily.


ensembl_gene_id: LH23_20855
symbol: fbaB_2
gene_biotype: protein_coding
description:
  Fructose-bisphosphate aldolase; Catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20865
symbol: yegT_2
gene_biotype: protein_coding
description:
  Nucleoside transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20885
symbol: thiD
gene_biotype: protein_coding
description:
  Hydroxymethylpyrimidine kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ). Belongs to the Thz kinase family.


ensembl_gene_id: LH23_20890
symbol: AIR63021.1
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20905
symbol: azoR1
gene_biotype: protein_coding
description:
  FMN-dependent NADH-azoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20915
symbol: AIR63026.1
gene_biotype: protein_coding
description:
  Type III effector HopBF1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20920
symbol: AIR63027.1
gene_biotype: protein_coding
description:
  Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20935
symbol: bglF_4
gene_biotype: protein_coding
description:
  PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20955
symbol: yhdN_2
gene_biotype: protein_coding
description:
  General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_20990
symbol: minD_1
gene_biotype: protein_coding
description:
  Antiporter; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: LH23_20995
symbol: metG
gene_biotype: protein_coding
description:
  methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: LH23_21005
symbol: ybjG
gene_biotype: protein_coding
description:
  UDP pyrophosphate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21015
symbol: dacC_1
gene_biotype: protein_coding
description:
  Peptidase M15; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family.


ensembl_gene_id: LH23_21035
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: LH23_21040
symbol: AIR63051.1
gene_biotype: protein_coding
description:
  Structural protein MipA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21045
symbol: gsiD_3
gene_biotype: protein_coding
description:
  Glutathione ABC transporter permease; With GsiABD is involved in the transport of glutathione into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21055
symbol: gsiB_3
gene_biotype: protein_coding
description:
  Glutathione ABC transporter substrate-binding protein; With GsiACD is involved in the transport of glutathione into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21060
symbol: gsiA_16
gene_biotype: protein_coding
description:
  Glutathione ABC transporter ATP-binding protein; With GsiBCD is involved in glutathione import; GsiA contains 2 ATP-binding domains; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: LH23_21065
symbol: iaaA_3
gene_biotype: protein_coding
description:
  Isoaspartyl peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21075
symbol: moeA_2
gene_biotype: protein_coding
description:
  Molybdopterin biosynthesis protein MoeA; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: LH23_21080
symbol: moeB_2
gene_biotype: protein_coding
description:
  Molybdopterin-synthase adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21085
symbol: AIR63060.1
gene_biotype: protein_coding
description:
  Magnesium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21100
symbol: yicI
gene_biotype: protein_coding
description:
  Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 31 family.


ensembl_gene_id: LH23_21110
symbol: ybiS_3
gene_biotype: protein_coding
description:
  L,D-transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21125
symbol: cdd
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis.


ensembl_gene_id: LH23_21130
symbol: AIR63069.1
gene_biotype: protein_coding
description:
  Vancomycin high temperature exclusion protein; Involved in vancomycin sensitivity and other barrier functions of the cell envelope; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21135
symbol: mglC
gene_biotype: protein_coding
description:
  Beta-methylgalactoside transporter permease; ABC transporter; functions in galactose transport; part of MglA2C2B transporter complex; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: LH23_21145
symbol: mglB
gene_biotype: protein_coding
description:
  Sugar ABC transporter substrate-binding protein; Wtih MglAC is involved in the transport of beta-methylgalactoside; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21160
symbol: folE
gene_biotype: protein_coding
description:
  GTP cyclohydrolase; Involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21170
symbol: cirA_2
gene_biotype: protein_coding
description:
  Cir; FeuA; CirA; receptor protein for siderophores (colicin IA, IB and V) and microcins (E492, H47, and M); TonB-dependent; able to transport monomers, dimer, and linear trimers of 2,3-dihydorxybenzoylserine; outer membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21175
symbol: yusV_2
gene_biotype: protein_coding
description:
  Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21180
symbol: AIR63079.1
gene_biotype: protein_coding
description:
  Iron-siderophore ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: LH23_21190
symbol: lysP_2
gene_biotype: protein_coding
description:
  Lysine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21205
symbol: tcyB
gene_biotype: protein_coding
description:
  Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21220
symbol: yeiH_2
gene_biotype: protein_coding
description:
  Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0324 family.


ensembl_gene_id: LH23_21225
symbol: nfo_1
gene_biotype: protein_coding
description:
  Endonuclease IV; Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21230
symbol: fruA_2
gene_biotype: protein_coding
description:
  PTS system fructose-specific transporter subunits IIBC; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21235
symbol: fruK
gene_biotype: protein_coding
description:
  1-phosphofructokinase; Converts fructose-1-phosphate and ATP to fructose-1,6-bisphosphate and ADP; highly specific for fructose-1-phopshate; similar to PfkB; forms homodimers; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: LH23_21240
symbol: fruB
gene_biotype: protein_coding
description:
  Bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein; Phosphoenolpyruvate (PEP)-dependent, sugar transporting phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIA is phosphorylated by phospho-HPr which then transfers the phosphoryl group to the IIB component; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21250
symbol: AIR63093.1
gene_biotype: protein_coding
description:
  Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: LH23_21285
symbol: yeiP
gene_biotype: protein_coding
description:
  Elongation factor P; Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro, suggesting its involvement in the formation of the first peptide bond of a protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the elongation factor P family.


ensembl_gene_id: LH23_21290
symbol: por_3
gene_biotype: protein_coding
description:
  D-mannonate oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mannitol dehydrogenase family.


ensembl_gene_id: LH23_21300
symbol: yeiU
gene_biotype: protein_coding
description:
  Membrane protein; Involved in the modification of the lipid A domain of lipopolysaccharides (LPS). Transfers a phosphate group from undecaprenyl pyrophosphate (C55-PP) to lipid A to form lipid A 1- diphosphate. Contributes to the recycling of undecaprenyl phosphate (C55-P); Belongs to the LpxT phosphotransferase family.


ensembl_gene_id: LH23_21305
symbol: spr
gene_biotype: protein_coding
description:
  Membrane protein; Mutational suppressor of prc thermosensitivity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21310
symbol: ycgG_2
gene_biotype: protein_coding
description:
  Involved in resistance to the phages N4 and lambda; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21315
symbol: AIR63105.1
gene_biotype: protein_coding
description:
  Antibiotic ABC transporter substrate-binding protein; With YejBEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21320
symbol: yejB_2
gene_biotype: protein_coding
description:
  Microcin ABC transporter permease; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21325
symbol: yejE_1
gene_biotype: protein_coding
description:
  Microcin ABC transporter permease; Part of the microcin C transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21330
symbol: gsiA_15
gene_biotype: protein_coding
description:
  Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: LH23_21340
symbol: bcr_2
gene_biotype: protein_coding
description:
  Bicyclomycin/multidrug efflux system; Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21345
symbol: AIR63111.1
gene_biotype: protein_coding
description:
  16S rRNA pseudouridylate synthase; Catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21355
symbol: rplY
gene_biotype: protein_coding
description:
  50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family.


ensembl_gene_id: LH23_21360
symbol: AIR63114.1
gene_biotype: protein_coding
description:
  Dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21365
symbol: yejK
gene_biotype: protein_coding
description:
  Nucleoid-associated protein NdpA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21370
symbol: yejL
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0352 family.


ensembl_gene_id: LH23_21390
symbol: AIR63119.1
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21395
symbol: yojI_4
gene_biotype: protein_coding
description:
  Multidrug transporter membrane component/ATP-binding component; Efflux pump for the antibacterial peptide microcin J25; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21400
symbol: alkB
gene_biotype: protein_coding
description:
  Alpha-ketoglutarate-dependent dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21405
symbol: ada_2
gene_biotype: protein_coding
description:
  6-O-methylguanine DNA methyltransferase; Regulates genes involved in the repair of alkylated DNA; repairs DNA containing 6-O-methylguanine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21415
symbol: ompC
gene_biotype: protein_coding
description:
  Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Gram-negative porin family.


ensembl_gene_id: LH23_21420
symbol: rcsD
gene_biotype: protein_coding
description:
  Phosphotransfer intermediate protein in two-component regulatory system with RcsBC; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsD is a phosphotransfer intermediate between the sensor kinase RcsC and the response regulator RcsB. It acquires a phosphoryl group from RcsC and transfers it to RcsB.


ensembl_gene_id: LH23_21425
symbol: rcsB
gene_biotype: protein_coding
description:
  Transcriptional regulator; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsB is the response regulator that binds to regulatory DNA regions.


ensembl_gene_id: LH23_21430
symbol: rcsC
gene_biotype: protein_coding
description:
  Histidine kinase; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB.


ensembl_gene_id: LH23_21435
symbol: gyrA_2
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21440
symbol: ubiG
gene_biotype: protein_coding
description:
  3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway. Belongs to the methyltransferase superfamily. UbiG/COQ3 family.


ensembl_gene_id: LH23_21450
symbol: nrdB
gene_biotype: protein_coding
description:
  Ribonucleotide-diphosphate reductase subunit beta; B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21455
symbol: ascD
gene_biotype: protein_coding
description:
  2Fe-2S ferredoxin; Plays a role in maintenance and possibly the biosynthesis of diferric-tyrosyl radical cofactor, essential for nucleotide reduction catalyzed by ribonucleotide reductases; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21460
symbol: glpQ
gene_biotype: protein_coding
description:
  Glycerophosphodiester phosphodiesterase; Hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols; periplasmic; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21465
symbol: glpT
gene_biotype: protein_coding
description:
  Sn-glycerol-3-phosphate transporter; Catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21470
symbol: glpA_1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21475
symbol: glpB
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor.


ensembl_gene_id: LH23_21480
symbol: glpC
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; Anaerobic; with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21500
symbol: menE
gene_biotype: protein_coding
description:
  O-succinylbenzoic acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21505
symbol: menC
gene_biotype: protein_coding
description:
  O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).


ensembl_gene_id: LH23_21510
symbol: menB
gene_biotype: protein_coding
description:
  Dihydroxynaphthoic acid synthetase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA).


ensembl_gene_id: LH23_21515
symbol: menH_2
gene_biotype: protein_coding
description:
  Catalyzes the formation of (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate in menaquinone biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21520
symbol: menD_1
gene_biotype: protein_coding
description:
  2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily.


ensembl_gene_id: LH23_21525
symbol: menF_1
gene_biotype: protein_coding
description:
  Isochorismate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21530
symbol: elaB_3
gene_biotype: protein_coding
description:
  Protein ElaB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21540
symbol: azoB
gene_biotype: protein_coding
description:
  NmrA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21555
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: LH23_21560
symbol: nuoM
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21565
symbol: nuoL_1
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit L; Catalyzes the transfer of electrons from NADH to ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21570
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: LH23_21575
symbol: nuoJ
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: LH23_21580
symbol: nuoI
gene_biotype: protein_coding
description:
  NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: LH23_21585
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: LH23_21590
symbol: nuoG_2
gene_biotype: protein_coding
description:
  NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.


ensembl_gene_id: LH23_21595
symbol: nuoF_2
gene_biotype: protein_coding
description:
  Part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21600
symbol: nuoE
gene_biotype: protein_coding
description:
  NADH dehydrogenase; Catalyzes the transfer of electrons from NADH to quinone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21605
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: LH23_21615
symbol: ndhC
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: LH23_21620
symbol: gltC_3
gene_biotype: protein_coding
description:
  Transcriptional regulator; Involved in the regulation of genes involved in flagella synthesis, motility and chemotaxis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: LH23_21630
symbol: AIR63165.1
gene_biotype: protein_coding
description:
  Aminotransferase; Broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21635
symbol: yfbR
gene_biotype: protein_coding
description:
  5'-nucleotidase; Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates.


ensembl_gene_id: LH23_21650
symbol: yfbU
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0304 family.


ensembl_gene_id: LH23_21665
symbol: ackA_2
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: LH23_21670
symbol: pta_4
gene_biotype: protein_coding
description:
  Catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21675
symbol: dxs_2
gene_biotype: protein_coding
description:
  Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21680
symbol: tktB_1
gene_biotype: protein_coding
description:
  Carbohydrate degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21685
symbol: ulaA_2
gene_biotype: protein_coding
description:
  PTS ascorbate transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21690
symbol: AIR63176.1
gene_biotype: protein_coding
description:
  PTS mannitol transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21695
symbol: ulaC_2
gene_biotype: protein_coding
description:
  PTS ascorbate transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21710
symbol: yfcE
gene_biotype: protein_coding
description:
  Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21715
symbol: yfcF_1
gene_biotype: protein_coding
description:
  Glutathione S-transferase; Catalyzes the formation of 2,4-dinitrophenyl-S-glutathione from 1-chloro-2,4-dinitrobenzene and glutathione; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21720
symbol: yfcG_2
gene_biotype: protein_coding
description:
  GSH-dependent disulfide bond oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GST superfamily.


ensembl_gene_id: LH23_21725
symbol: folX
gene_biotype: protein_coding
description:
  D-erythro-7,8-dihydroneopterin triphosphate epimerase; Catalyzes the formation of dihydromonapterin triphosphate from dihydroneopterin triphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21735
symbol: csbX
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein CcdA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21745
symbol: por_1
gene_biotype: protein_coding
description:
  D-arabinitol 4-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21760
symbol: hisM
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease; With HisJPQ is involved in transport of histidine, lysine, arginine and ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21765
symbol: hisQ
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease; With HisJMP is involved in the transport of histidine/lysine/arginine/ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21770
symbol: hisJ
gene_biotype: protein_coding
description:
  Histidine ABC transporter substrate-binding protein HisJ; With HisPMQ is involved in the transport of histidine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21775
symbol: argT_1
gene_biotype: protein_coding
description:
  Histidine ABC transporter substrate-binding protein HisJ; With HisPMQ is involved in the transport of histidine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: LH23_21780
symbol: pad1
gene_biotype: protein_coding
description:
  3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: LH23_21785
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: LH23_21790
symbol: cvpA
gene_biotype: protein_coding
description:
  Membrane protein required for colicin V production; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21795
symbol: dedD
gene_biotype: protein_coding
description:
  Cell division protein DedD; Non-essential cell division protein that could be required for efficient cell constriction.


ensembl_gene_id: LH23_21800
symbol: folC_3
gene_biotype: protein_coding
description:
  Bifunctional folylpolyglutamate synthase/ dihydrofolate synthase; Functions in two distinct reactions of the de novo folate biosynthetic pathway. Catalyzes the addition of a glutamate residue to dihydropteroate (7,8-dihydropteroate or H2Pte) to form dihydrofolate (7,8-dihydrofolate monoglutamate or H2Pte-Glu). Also catalyzes successive additions of L-glutamate to tetrahydrofolate or 10- formyltetrahydrofolate or 5,10-methylenetetrahydrofolate, leading to folylpolyglutamate derivatives.


ensembl_gene_id: LH23_21805
symbol: accD_3
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase subunit beta; Catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21815
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: LH23_21820
symbol: usg
gene_biotype: protein_coding
description:
  Semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: LH23_21825
symbol: pdxB_1
gene_biotype: protein_coding
description:
  Erythronate-4-phosphate dehydrogenase; Catalyzes the formation of 3-hydroxy-2-oxo-4-phosphonooxybutanoate from erythronate-4-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21830
symbol: flk
gene_biotype: protein_coding
description:
  In Salmonella typhimurium Flk regulates flagellar biosynthesis by inhibition of the flagellar-associated type III secretion system; lowers secretion levels of the anti-sigma28 factor FlgM to the periplasm; inner membrane-anchored protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21840
symbol: fabB_2
gene_biotype: protein_coding
description:
  FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: LH23_21845
symbol: mnmC
gene_biotype: protein_coding
description:
  FAD-dependent oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.


ensembl_gene_id: LH23_21855
symbol: AIR63209.1
gene_biotype: protein_coding
description:
  Elongation factor P hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21865
symbol: mepA
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21870
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: LH23_21875
symbol: prmB
gene_biotype: protein_coding
description:
  SAM-dependent methyltransferase; Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue; Belongs to the protein N5-glutamine methyltransferase family. PrmB subfamily.


ensembl_gene_id: LH23_21885
symbol: sixA_1
gene_biotype: protein_coding
description:
  Phosphohistidine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21890
symbol: fadJ
gene_biotype: protein_coding
description:
  Multifunctional fatty acid oxidation complex subunit alpha; Multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI; similar to FadA2B2 complex; involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21895
symbol: fadI
gene_biotype: protein_coding
description:
  3-ketoacyl-CoA thiolase; FadI; fatty acid oxidation complex component beta; functions in a heterotetramer with FadJ; similar to FadA2B2 complex; functions in beta-oxidation of fatty acids during anaerobic growth; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21905
symbol: fadL_2
gene_biotype: protein_coding
description:
  Long-chain fatty acid outer membrane transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21910
symbol: cadA
gene_biotype: protein_coding
description:
  Cadmium ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21925
symbol: AIR63223.1
gene_biotype: protein_coding
description:
  SPFH/Band 7/PHB domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21930
symbol: mlaA
gene_biotype: protein_coding
description:
  ABC transporter permease; Involved in maintaining OM lipid asymmetry; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21935
symbol: ccmH_2
gene_biotype: protein_coding
description:
  Heme lyase subunit CcmH; Cytochrome c-type biogenesis protein; involved in the attachment of heme to cytochrome c; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21940
symbol: dsbE_1
gene_biotype: protein_coding
description:
  Thiol:disulfide interchange protein DsbE; Cytochrome c-type biogenesis thioredoxin; involved in the reduction of disulfide bonds to allow heme bonding; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21945
symbol: ccmF_2
gene_biotype: protein_coding
description:
  Cytochrome c-type biogenesis protein; required for the transfer of heme to apocytochrome c; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21950
symbol: ccmE
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.


ensembl_gene_id: LH23_21955
symbol: ccmD
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein CcmD; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family.


ensembl_gene_id: LH23_21960
symbol: ccmC
gene_biotype: protein_coding
description:
  Heme ABC transporter permease; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.


ensembl_gene_id: LH23_21965
symbol: ccmB
gene_biotype: protein_coding
description:
  With CcmABCE is involved in the transport of protoheme IX; CcmB is required for the release of holoCcmE from CcmC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_21970
symbol: ccmA
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.


ensembl_gene_id: LH23_21990
symbol: AIR63235.1
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutT; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22000
symbol: AIR63237.1
gene_biotype: protein_coding
description:
  ADP-ribose pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22045
symbol: mdtE_2
gene_biotype: protein_coding
description:
  Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: LH23_22055
symbol: rluA_2
gene_biotype: protein_coding
description:
  Pseudouridylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22070
symbol: AIR63251.1
gene_biotype: protein_coding
description:
  Spermidine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22080
symbol: prr_1
gene_biotype: protein_coding
description:
  Phenylacetaldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22100
symbol: accC_5
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22105
symbol: AIR63258.1
gene_biotype: protein_coding
description:
  acetyl-COA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22115
symbol: AIR63260.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.


ensembl_gene_id: LH23_22145
symbol: dapL_1
gene_biotype: protein_coding
description:
  Glutamate-pyruvate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22165
symbol: mrkE
gene_biotype: protein_coding
description:
  LytTR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22170
symbol: glk
gene_biotype: protein_coding
description:
  Glucokinase; Catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial glucokinase family.


ensembl_gene_id: LH23_22175
symbol: AIR63271.1
gene_biotype: protein_coding
description:
  Ion channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22180
symbol: ipdC_1
gene_biotype: protein_coding
description:
  Indolepyruvate decarboxylase; Thiamindiphosphate-dependent; catalyzes the formation of indoleacetaldehyde from indolepyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22195
symbol: mntH
gene_biotype: protein_coding
description:
  Manganese transport protein MntH; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.


ensembl_gene_id: LH23_22200
symbol: nupC_2
gene_biotype: protein_coding
description:
  Nucleoside permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family.


ensembl_gene_id: LH23_22235
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).


ensembl_gene_id: LH23_22260
symbol: AIR63282.1
gene_biotype: protein_coding
description:
  flxA-like family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22280
symbol: ligA
gene_biotype: protein_coding
description:
  NAD-dependent DNA ligase LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: LH23_22285
symbol: zipA
gene_biotype: protein_coding
description:
  Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.


ensembl_gene_id: LH23_22290
symbol: cysZ
gene_biotype: protein_coding
description:
  Sulfate transporter; High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway; Belongs to the CysZ family.


ensembl_gene_id: LH23_22295
symbol: cysK
gene_biotype: protein_coding
description:
  Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family.


ensembl_gene_id: LH23_22305
symbol: ptsI_2
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: LH23_22310
symbol: crr_2
gene_biotype: protein_coding
description:
  PTS system glucose-specific transporter subunit IIA; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22315
symbol: pdxK
gene_biotype: protein_coding
description:
  Pyridoxal kinase; Catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22325
symbol: oxdD
gene_biotype: protein_coding
description:
  Oxalate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22330
symbol: cysM
gene_biotype: protein_coding
description:
  Cysteine synthase; Catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family.


ensembl_gene_id: LH23_22335
symbol: cysA_2
gene_biotype: protein_coding
description:
  Sulfate/thiosulfate transporter subunit; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.


ensembl_gene_id: LH23_22340
symbol: cysW
gene_biotype: protein_coding
description:
  Part of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22345
symbol: cysW_3
gene_biotype: protein_coding
description:
  Sulfate/thiosulfate transporter subunit; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: LH23_22350
symbol: cysP
gene_biotype: protein_coding
description:
  Thiosulfate transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22360
symbol: yfeY
gene_biotype: protein_coding
description:
  RpoE-regulated lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22370
symbol: ypeA
gene_biotype: protein_coding
description:
  Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the acetyltransferase family. YpeA subfamily.


ensembl_gene_id: LH23_22375
symbol: amiA
gene_biotype: protein_coding
description:
  N-acetylmuramoyl-l-alanine amidase I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22380
symbol: hemF
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.


ensembl_gene_id: LH23_22385
symbol: maeB
gene_biotype: protein_coding
description:
  Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22395
symbol: tktB_3
gene_biotype: protein_coding
description:
  Transketolase; Catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22410
symbol: napC
gene_biotype: protein_coding
description:
  With NapABDFGH functions as a nitrate reductase; NapC functions as an electron shuttle between NapAB and NapGH or quinone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22415
symbol: napB
gene_biotype: protein_coding
description:
  Nitrate reductase; Small subunit of periplasmic nitrate reductase; receives electrons from the membrane-bound NapC and passes them to NapA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22420
symbol: napA_1
gene_biotype: protein_coding
description:
  Nitrate reductase; Periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22425
symbol: napD
gene_biotype: protein_coding
description:
  Nitrate reductase; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.


ensembl_gene_id: LH23_22430
symbol: AIR63316.1
gene_biotype: protein_coding
description:
  Ferredoxin; Predicted role in electron transfer to the periplasmic nitrate reductase protein NapA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22435
symbol: narX_1
gene_biotype: protein_coding
description:
  Nitrate/nitrite sensor protein NarQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22440
symbol: narL_1
gene_biotype: protein_coding
description:
  Nitrate/nitrite response regulator NarP; NarP is phosphorylated by NarX and NarQ and can activate fdnG and nitrite or nitrate reductase systems; represses expression of other anaerobic genes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22450
symbol: yffB
gene_biotype: protein_coding
description:
  Reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ArsC family.


ensembl_gene_id: LH23_22455
symbol: dapE
gene_biotype: protein_coding
description:
  Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.


ensembl_gene_id: LH23_22470
symbol: tmcA
gene_biotype: protein_coding
description:
  Cetylates the wobble base C34 of the elongation-specific methionine tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22480
symbol: purC_2
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole-succinocarboxamide synthase; Catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22490
symbol: dapA_1
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: LH23_22495
symbol: gcvR
gene_biotype: protein_coding
description:
  Glycine cleavage system transcriptional repressor; Negative transcriptional regulator of the gcvTHP operon; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22500
symbol: bcp
gene_biotype: protein_coding
description:
  Thiol peroxidase; Bacterioferritin comigratory protein; thiol peroxidase; thioredoxin-dependent; hydroperoxide peroxidase; in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide; contains an active site cysteine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22530
symbol: bepA
gene_biotype: protein_coding
description:
  TPR repeat-containing protein; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state; Belongs to the peptidase M48B family.


ensembl_gene_id: LH23_22540
symbol: AIR63337.1
gene_biotype: protein_coding
description:
  Phosphoglycerol transferase I; Catalyzes the transfer of phosphoglycerol to the glucan backbone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22545
symbol: ahpC
gene_biotype: protein_coding
description:
  Alkyl hydroperoxide reductase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.


ensembl_gene_id: LH23_22555
symbol: cysS
gene_biotype: protein_coding
description:
  cysteine--tRNA ligase; Catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22560
symbol: ppiB_1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22565
symbol: lpxH
gene_biotype: protein_coding
description:
  UDP-2,3-diacylglucosamine hydrolase; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: LH23_22570
symbol: purE
gene_biotype: protein_coding
description:
  N5-carboxyaminoimidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: LH23_22575
symbol: purK_1
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22580
symbol: selU
gene_biotype: protein_coding
description:
  tRNA 2-selenouridine synthase; Catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SelU family.


ensembl_gene_id: LH23_22585
symbol: tetA_3
gene_biotype: protein_coding
description:
  Transporter, major facilitator family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22610
symbol: metP_1
gene_biotype: protein_coding
description:
  Methionine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22620
symbol: metQ_3
gene_biotype: protein_coding
description:
  Methionine ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22680
symbol: cueR
gene_biotype: protein_coding
description:
  Transcriptional regulator; Activator of copper-responsive regulon genes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22685
symbol: copA
gene_biotype: protein_coding
description:
  Copper-transporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22690
symbol: AIR63365.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein TraB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22695
symbol: ybaK_2
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.


ensembl_gene_id: LH23_22700
symbol: ushA
gene_biotype: protein_coding
description:
  5'-nucleotidase; Catalyzes the degradation of periplasmic UDP-glucose to uridine, glucose-1-phosphate and inorganic phosphate; specific for uridine nucleotides; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5'-nucleotidase family.


ensembl_gene_id: LH23_22705
symbol: fsr_2
gene_biotype: protein_coding
description:
  Fosmidomycin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22710
symbol: ybaL
gene_biotype: protein_coding
description:
  Cation:proton antiport protein; YbaL; member of the CPA-2 family of antiporters; uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: LH23_22725
symbol: gsk_2
gene_biotype: protein_coding
description:
  Guanosine kinase; Catalyzes the formation of inosine/guanosine monophosphate from inosine or guanosine and ATP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22735
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: LH23_22740
symbol: htpG_2
gene_biotype: protein_coding
description:
  Heat shock protein 90; Molecular chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22745
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: LH23_22760
symbol: ybaB
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: LH23_22765
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III subunits gamma and tau; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22770
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: LH23_22780
symbol: priC
gene_biotype: protein_coding
description:
  Prephenate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22800
symbol: acrA_1
gene_biotype: protein_coding
description:
  Multidrug transporter; With AcrD and TolC forms a transport system involved in resistance to a number of compounds including lipophilic antibiotics; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: LH23_22810
symbol: tomB
gene_biotype: protein_coding
description:
  Hha toxicity attenuator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22815
symbol: hha
gene_biotype: protein_coding
description:
  Gene expression modulator; With Hns involved in transcriptional regulation of hemolysin; non-specific DNA-binding protein which affects the production of multiple proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22820
symbol: maa
gene_biotype: protein_coding
description:
  Maltose acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22830
symbol: rpmJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L36; Smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22835
symbol: rpmE2
gene_biotype: protein_coding
description:
  50S ribosomal protein L31; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22845
symbol: AIR63395.1
gene_biotype: protein_coding
description:
  2-oxobutyrate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22850
symbol: metQ_2
gene_biotype: protein_coding
description:
  Metal ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22860
symbol: metI_2
gene_biotype: protein_coding
description:
  Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22870
symbol: rspA_2
gene_biotype: protein_coding
description:
  2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22890
symbol: modB_3
gene_biotype: protein_coding
description:
  Sulfate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22900
symbol: norR
gene_biotype: protein_coding
description:
  Transcriptional regulator; Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22905
symbol: norV
gene_biotype: protein_coding
description:
  Detoxifies nitric oxide using NADH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22910
symbol: norW_3
gene_biotype: protein_coding
description:
  NADH:flavorubredoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22915
symbol: gldA_3
gene_biotype: protein_coding
description:
  Oxidoreductase; Member of the iron-containing alcohol dehydrogenase family; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22945
symbol: mtnK
gene_biotype: protein_coding
description:
  Methylthioribose kinase; Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.


ensembl_gene_id: LH23_22950
symbol: mtnA
gene_biotype: protein_coding
description:
  Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: LH23_22955
symbol: mtnD
gene_biotype: protein_coding
description:
  Acireductone dioxygenase; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway.


ensembl_gene_id: LH23_22960
symbol: mtnC
gene_biotype: protein_coding
description:
  Haloacid dehalogenase; Bifunctional enzyme that catalyzes the enolization of 2,3- diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK- MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene). Belongs to the HAD-like hydrolase superfamily. MasA/MtnC family.


ensembl_gene_id: LH23_22965
symbol: ybdL_1
gene_biotype: protein_coding
description:
  Methionine aminotransferase; Catalyzes the transfer of an amino moiety; preference for methionine followed by histidine and phenylalanine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22970
symbol: hda
gene_biotype: protein_coding
description:
  DNA replication initiation factor; Mediates the interaction of DNA replication inititator protein DnaA with DNA polymerase subunit beta sliding clamp (dnaN). Stimulates hydrolysis of ATP-DnaA to ADP-DnaA, rendering DnaA inactive for reinititation, a process called regulatory inhibition of DnaA or RIDA; Belongs to the DnaA family. HdA subfamily.


ensembl_gene_id: LH23_22975
symbol: uraA
gene_biotype: protein_coding
description:
  Uracil transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22980
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: LH23_22985
symbol: purM
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole synthetase; Catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_22990
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: LH23_22995
symbol: ppk1
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: LH23_23000
symbol: ppx
gene_biotype: protein_coding
description:
  Exopolyphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GppA/Ppx family.


ensembl_gene_id: LH23_23015
symbol: AIR63428.1
gene_biotype: protein_coding
description:
  Glyoxalase/bleomycin resistance protein/dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_23020
symbol: AIR63429.1
gene_biotype: protein_coding
description:
  Fatty acid desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_23025
symbol: AIR63430.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_23035
symbol: opuBC
gene_biotype: protein_coding
description:
  Quaternary ammonium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_23075
symbol: leuE
gene_biotype: protein_coding
description:
  Amino acid transporter LysE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_23090
symbol: AIR63443.1
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_23110
symbol: guaA
gene_biotype: protein_coding
description:
  GMP synthase; Contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_23115
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: LH23_23120
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: LH23_23130
symbol: gatA_3
gene_biotype: protein_coding
description:
  glutamyl-tRNA amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_23135
symbol: codB_1
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_23160
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: LH23_23175
symbol: hisS
gene_biotype: protein_coding
description:
  histidine--tRNA ligase; Catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_23180
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: LH23_23185
symbol: rodZ
gene_biotype: protein_coding
description:
  Cytoskeletal protein RodZ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_23190
symbol: rlmN
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: LH23_23195
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: LH23_23200
symbol: ponA
gene_biotype: protein_coding
description:
  Penicillin-binding protein 1C; Penicillin-insensitive transglycosylase/transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_23210
symbol: sseA
gene_biotype: protein_coding
description:
  3-mercaptopyruvate sulfurtransferase; Catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_23215
symbol: AIR63468.1
gene_biotype: protein_coding
description:
  Enhanced serine sensitivity protein SseB; Enhances serine sensitivity caused by inhibition of homoserine dehydrogenase I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_23220
symbol: pepB
gene_biotype: protein_coding
description:
  Aminopeptidase B; Catalyzes the removal of an N-terminal amino acid from a peptide or arylamide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_23230
symbol: fdx
gene_biotype: protein_coding
description:
  2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_23235
symbol: hscA
gene_biotype: protein_coding
description:
  Chaperone protein HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB. Involved in the maturation of IscU.


ensembl_gene_id: LH23_23240
symbol: hscB
gene_biotype: protein_coding
description:
  Co-chaperone HscB; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family.


ensembl_gene_id: LH23_23245
symbol: iscA
gene_biotype: protein_coding
description:
  Iron-sulfur cluster assembly protein; Is able to transfer iron-sulfur clusters to apo-ferredoxin. Multiple cycles of [2Fe2S] cluster formation and transfer are observed, suggesting that IscA acts catalytically. Recruits intracellular free iron so as to provide iron for the assembly of transient iron-sulfur cluster in IscU in the presence of IscS, L-cysteine and the thioredoxin reductase system TrxA/TrxB.


ensembl_gene_id: LH23_23250
symbol: nifU
gene_biotype: protein_coding
description:
  Scaffolding protein; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.


ensembl_gene_id: LH23_23255
symbol: iscS_1
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_23260
symbol: iscR
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins.


ensembl_gene_id: LH23_23265
symbol: trmJ-2
gene_biotype: protein_coding
description:
  tRNA (cytidine/uridine-2'-O-)-methyltransferase; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.


ensembl_gene_id: LH23_23270
symbol: suhB_1
gene_biotype: protein_coding
description:
  Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the inositol monophosphatase superfamily.


ensembl_gene_id: LH23_23285
symbol: AIR63482.1
gene_biotype: protein_coding
description:
  Stationary phase inducible protein CsiE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_23290
symbol: hcaT
gene_biotype: protein_coding
description:
  3-phenylpropionic acid transporter; Transporter of 3-phenylpropionate across the inner membrane; member of the major facilitator superfamily of transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_23295
symbol: AIR63484.1
gene_biotype: protein_coding
description:
  Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_23300
symbol: xylE
gene_biotype: protein_coding
description:
  MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: LH23_23340
symbol: araB
gene_biotype: protein_coding
description:
  Ribulokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_23345
symbol: kdsD_2
gene_biotype: protein_coding
description:
  Phosphosugar isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LH23_23350
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: LH23_23355
symbol: hmp_2
gene_biotype: protein_coding
description:
  Dihydropteridine reductase; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily.


ensembl_gene_id: LH23_23380
symbol: AIR63501.1
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase; Catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


