# geneInfo

ensembl_gene_id: DPF_0013
symbol: DPF_0013
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase; Subunit R is required for both nuclease and ATPase activities, but not for modification.


ensembl_gene_id: DPF_0018
symbol: DPF_0018
gene_biotype: protein_coding
description:
  Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.


ensembl_gene_id: DPF_0032
symbol: DPF_0032
gene_biotype: protein_coding
description:
  5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: DPF_0073
symbol: DPF_0073
gene_biotype: protein_coding
description:
  Hypothetical protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.


ensembl_gene_id: DPF_0077
symbol: DPF_0077
gene_biotype: protein_coding
description:
  ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: DPF_0085
symbol: DPF_0085
gene_biotype: protein_coding
description:
  Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: DPF_0091
symbol: DPF_0091
gene_biotype: protein_coding
description:
  Iron ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: DPF_0101
symbol: DPF_0101
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: DPF_0104
symbol: ybeY
gene_biotype: protein_coding
description:
  16S rRNA maturation RNase YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: DPF_0110
symbol: dksA
gene_biotype: protein_coding
description:
  Conjugal transfer protein TraR; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.


ensembl_gene_id: DPF_0121
symbol: DPF_0121
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: DPF_0122
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: DPF_0123
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: DPF_0124
symbol: ruvC
gene_biotype: protein_coding
description:
  Holliday junction resolvase; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: DPF_0126
symbol: rlmE
gene_biotype: protein_coding
description:
  50S rRNA methyltransferase; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.


ensembl_gene_id: DPF_0129
symbol: DPF_0129
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: DPF_0138
symbol: DPF_0138
gene_biotype: protein_coding
description:
  Oxidoreductase; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.


ensembl_gene_id: DPF_0147
symbol: rsfS
gene_biotype: protein_coding
description:
  Hypothetical protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: DPF_0148
symbol: DPF_0148
gene_biotype: protein_coding
description:
  phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).


ensembl_gene_id: DPF_0151
symbol: DPF_0151
gene_biotype: protein_coding
description:
  ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: DPF_0157
symbol: DPF_0157
gene_biotype: protein_coding
description:
  Phosphate ABC transporter permease; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: DPF_0161
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: DPF_0163
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: DPF_0169
symbol: ugpE
gene_biotype: protein_coding
description:
  ABC transporter permease; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.


ensembl_gene_id: DPF_0176
symbol: DPF_0176
gene_biotype: protein_coding
description:
  Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.


ensembl_gene_id: DPF_0178
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: DPF_0187
symbol: lolD
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.


ensembl_gene_id: DPF_0188
symbol: bamA
gene_biotype: protein_coding
description:
  Outer membrane protein assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: DPF_0190
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: DPF_0191
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-ACP dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: DPF_0192
symbol: lpxA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: DPF_0199
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: DPF_0206
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: DPF_0207
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: DPF_0208
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: DPF_0209
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: DPF_0210
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: DPF_0211
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: DPF_0212
symbol: rpsE
gene_biotype: protein_coding
description:
  30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: DPF_0213
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: DPF_0214
symbol: rplF
gene_biotype: protein_coding
description:
  50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: DPF_0215
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: DPF_0216
symbol: rplE
gene_biotype: protein_coding
description:
  50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: DPF_0217
symbol: rplX
gene_biotype: protein_coding
description:
  50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: DPF_0218
symbol: rplN
gene_biotype: protein_coding
description:
  50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: DPF_0219
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: DPF_0221
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: DPF_0222
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: DPF_0223
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: DPF_0224
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: DPF_0225
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: DPF_0226
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: DPF_0228
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: DPF_0229
symbol: rpsJ
gene_biotype: protein_coding
description:
  30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: DPF_0230
symbol: fusA
gene_biotype: protein_coding
description:
  Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: DPF_0231
symbol: rpsG
gene_biotype: protein_coding
description:
  30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: DPF_0232
symbol: rpsL
gene_biotype: protein_coding
description:
  30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: DPF_0233
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: DPF_0235
symbol: rplL
gene_biotype: protein_coding
description:
  50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: DPF_0236
symbol: rplJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: DPF_0237
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: DPF_0238
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: DPF_0239
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription termination/antitermination factor NusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: DPF_0240
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: DPF_0242
symbol: tuf
gene_biotype: protein_coding
description:
  Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: DPF_0247
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: DPF_0252
symbol: DPF_0252
gene_biotype: protein_coding
description:
  1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.


ensembl_gene_id: DPF_0253
symbol: rnj
gene_biotype: protein_coding
description:
  Ribonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: DPF_0255
symbol: tsf
gene_biotype: protein_coding
description:
  Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: DPF_0257
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: DPF_0258
symbol: DPF_0258
gene_biotype: protein_coding
description:
  UDP pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: DPF_0260
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: DPF_0263
symbol: DPF_0263
gene_biotype: protein_coding
description:
  Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: DPF_0264
symbol: DPF_0264
gene_biotype: protein_coding
description:
  Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: DPF_0305
symbol: DPF_0305
gene_biotype: protein_coding
description:
  NADP transhydrogenase subunit alpha; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: DPF_0312
symbol: DPF_0312
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: DPF_0313
symbol: DPF_0313
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: DPF_0324
symbol: DPF_0324
gene_biotype: protein_coding
description:
  2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.


ensembl_gene_id: DPF_0344
symbol: DPF_0344
gene_biotype: protein_coding
description:
  Hypothetical protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: DPF_0345
symbol: pcm
gene_biotype: protein_coding
description:
  protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.


ensembl_gene_id: DPF_0348
symbol: DPF_0348
gene_biotype: protein_coding
description:
  GTPase YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: DPF_0349
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: DPF_0359
symbol: DPF_0359
gene_biotype: protein_coding
description:
  Iron transporter FeoB; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: DPF_0364
symbol: DPF_0364
gene_biotype: protein_coding
description:
  Cobalt-zinc-cadmium resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: DPF_0370
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: DPF_0373
symbol: DPF_0373
gene_biotype: protein_coding
description:
  Alanine racemase; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: DPF_0375
symbol: DPF_0375
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.


ensembl_gene_id: DPF_0386
symbol: DPF_0386
gene_biotype: protein_coding
description:
  Indolepyruvate ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.


ensembl_gene_id: DPF_0388
symbol: proA
gene_biotype: protein_coding
description:
  Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: DPF_0391
symbol: DPF_0391
gene_biotype: protein_coding
description:
  (uracil-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: DPF_0397
symbol: rsmG
gene_biotype: protein_coding
description:
  Hypothetical protein; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.


ensembl_gene_id: DPF_0405
symbol: ftsH
gene_biotype: protein_coding
description:
  Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: DPF_0406
symbol: DPF_0406
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: DPF_0407
symbol: dacA
gene_biotype: protein_coding
description:
  Membrane protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: DPF_0409
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: DPF_0412
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: DPF_0420
symbol: DPF_0420
gene_biotype: protein_coding
description:
  30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.


ensembl_gene_id: DPF_0421
symbol: zupT
gene_biotype: protein_coding
description:
  Zinc transporter ZupT; Mediates zinc uptake. May also transport other divalent cations; Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily.


ensembl_gene_id: DPF_0425
symbol: murJ
gene_biotype: protein_coding
description:
  Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: DPF_0426
symbol: lon
gene_biotype: protein_coding
description:
  DNA-binding protein; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: DPF_0427
symbol: clpX
gene_biotype: protein_coding
description:
  ATPase AAA; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: DPF_0428
symbol: clpP
gene_biotype: protein_coding
description:
  Clp protease ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: DPF_0429
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: DPF_0432
symbol: proB
gene_biotype: protein_coding
description:
  Gamma-glutamyl kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: DPF_0433
symbol: obg
gene_biotype: protein_coding
description:
  GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: DPF_0435
symbol: rplU
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: DPF_0442
symbol: DPF_0442
gene_biotype: protein_coding
description:
  DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: DPF_0444
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: DPF_0446
symbol: DPF_0446
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: DPF_0448
symbol: DPF_0448
gene_biotype: protein_coding
description:
  1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family.  In the N-terminal section; belongs to the proline dehydrogenase family.


ensembl_gene_id: DPF_0459
symbol: DPF_0459
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: DPF_0464
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.


ensembl_gene_id: DPF_0478
symbol: DPF_0478
gene_biotype: protein_coding
description:
  Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: DPF_0507
symbol: DPF_0507
gene_biotype: protein_coding
description:
  Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: DPF_0513
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: DPF_0516
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: DPF_0517
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: DPF_0518
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: DPF_0519
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: DPF_0521
symbol: murG
gene_biotype: protein_coding
description:
  UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: DPF_0525
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: DPF_0526
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: DPF_0529
symbol: DPF_0529
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: DPF_0535
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: DPF_0540
symbol: trmJ
gene_biotype: protein_coding
description:
  rRNA methyltransferase; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.


ensembl_gene_id: DPF_0541
symbol: cpoB
gene_biotype: protein_coding
description:
  Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.


ensembl_gene_id: DPF_0543
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: DPF_0544
symbol: lspA
gene_biotype: protein_coding
description:
  Peptidase A8; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: DPF_0545
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: DPF_0552
symbol: DPF_0552
gene_biotype: protein_coding
description:
  ATPase; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: DPF_0554
symbol: DPF_0554
gene_biotype: protein_coding
description:
  CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: DPF_0559
symbol: DPF_0559
gene_biotype: protein_coding
description:
  Septum formation initiator; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: DPF_0565
symbol: tsaD
gene_biotype: protein_coding
description:
  tRNA threonylcarbamoyladenosine modification protein TsaD; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: DPF_0568
symbol: bamD
gene_biotype: protein_coding
description:
  Membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: DPF_0575
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: DPF_0578
symbol: lon-2
gene_biotype: protein_coding
description:
  Peptidase; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: DPF_0584
symbol: nusB
gene_biotype: protein_coding
description:
  N utilization substance protein B; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: DPF_0585
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: DPF_0586
symbol: ribBA
gene_biotype: protein_coding
description:
  3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: DPF_0588
symbol: DPF_0588
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: DPF_0590
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: DPF_0591
symbol: DPF_0591
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: DPF_0593
symbol: DPF_0593
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: DPF_0594
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: DPF_0595
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: DPF_0601
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).


ensembl_gene_id: DPF_0609
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: DPF_0611
symbol: surE
gene_biotype: protein_coding
description:
  Stationary phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: DPF_0624
symbol: DPF_0624
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: DPF_0625
symbol: queH
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).


ensembl_gene_id: DPF_0628
symbol: DPF_0628
gene_biotype: protein_coding
description:
  tRNA (adenine-N1)-methyltransferase; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA.


ensembl_gene_id: DPF_0638
symbol: lepA
gene_biotype: protein_coding
description:
  Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: DPF_0646
symbol: DPF_0646
gene_biotype: protein_coding
description:
  3-hydroxypropionyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.


ensembl_gene_id: DPF_0647
symbol: coaX
gene_biotype: protein_coding
description:
  Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: DPF_0648
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: DPF_0649
symbol: folD
gene_biotype: protein_coding
description:
  Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: DPF_0656
symbol: DPF_0656
gene_biotype: protein_coding
description:
  NAD+ synthetase; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family.


ensembl_gene_id: DPF_0658
symbol: gpt
gene_biotype: protein_coding
description:
  Xanthine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.


ensembl_gene_id: DPF_0660
symbol: DPF_0660
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: DPF_0666
symbol: trmFO
gene_biotype: protein_coding
description:
  tRNA (uracil-5-)-methyltransferase Gid; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.


ensembl_gene_id: DPF_0667
symbol: DPF_0667
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: DPF_0670
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: DPF_0677
symbol: DPF_0677
gene_biotype: protein_coding
description:
  Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.


ensembl_gene_id: DPF_0683
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: DPF_0687
symbol: clpB
gene_biotype: protein_coding
description:
  ATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: DPF_0702
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: DPF_0703
symbol: groS
gene_biotype: protein_coding
description:
  Molecular chaperone GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: DPF_0704
symbol: groL
gene_biotype: protein_coding
description:
  Molecular chaperone GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: DPF_0718
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: DPF_0725
symbol: DPF_0725
gene_biotype: protein_coding
description:
  Type II secretory protein GspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.


ensembl_gene_id: DPF_0740
symbol: purE
gene_biotype: protein_coding
description:
  N5-carboxyaminoimidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: DPF_0742
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: DPF_0743
symbol: lptD
gene_biotype: protein_coding
description:
  Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.


ensembl_gene_id: DPF_0757
symbol: cbiA
gene_biotype: protein_coding
description:
  Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: DPF_0782
symbol: mltG
gene_biotype: protein_coding
description:
  Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.


ensembl_gene_id: DPF_0783
symbol: DPF_0783
gene_biotype: protein_coding
description:
  Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: DPF_0785
symbol: ychF
gene_biotype: protein_coding
description:
  GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: DPF_0786
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: DPF_0787
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]


ensembl_gene_id: DPF_0788
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: DPF_0790
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: DPF_0792
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: DPF_0800
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: DPF_0801
symbol: DPF_0801
gene_biotype: protein_coding
description:
  Glutamine ABC transporter substrate-bindnig protein; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: DPF_0810
symbol: mqnC
gene_biotype: protein_coding
description:
  Hypothetical protein; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: DPF_0859
symbol: DPF_0859
gene_biotype: protein_coding
description:
  Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: DPF_0866
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: DPF_0879
symbol: DPF_0879
gene_biotype: protein_coding
description:
  Acriflavine resistance protein B; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: DPF_0880
symbol: DPF_0880
gene_biotype: protein_coding
description:
  RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: DPF_0885
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: DPF_0886
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: DPF_0897
symbol: recC
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V subunit gamma; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and re [...]


ensembl_gene_id: DPF_0898
symbol: recB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V subunit beta; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and rep [...]


ensembl_gene_id: DPF_0899
symbol: recD
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V subunit alpha; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and re [...]


ensembl_gene_id: DPF_0937
symbol: DPF_0937
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase sigma-70 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: DPF_0941
symbol: DPF_0941
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: DPF_0943
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: DPF_0950
symbol: DPF_0950
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: DPF_0954
symbol: DPF_0954
gene_biotype: protein_coding
description:
  Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.


ensembl_gene_id: DPF_0957
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium transporter; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: DPF_0979
symbol: DPF_0979
gene_biotype: protein_coding
description:
  Multidrug transporter AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: DPF_0980
symbol: msrB
gene_biotype: protein_coding
description:
  Methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: DPF_0988
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: DPF_0991
symbol: dapL
gene_biotype: protein_coding
description:
  Aspartate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate.


ensembl_gene_id: DPF_1002
symbol: DPF_1002
gene_biotype: protein_coding
description:
  Phospholipase; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family.


ensembl_gene_id: DPF_1003
symbol: DPF_1003
gene_biotype: protein_coding
description:
  phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).


ensembl_gene_id: DPF_1004
symbol: DPF_1004
gene_biotype: protein_coding
description:
  Peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.


ensembl_gene_id: DPF_1005
symbol: mobA
gene_biotype: protein_coding
description:
  Molybdopterin-guanine dinucleotide biosynthesis protein MobA; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.


ensembl_gene_id: DPF_1006
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: DPF_1011
symbol: ubiE
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).


ensembl_gene_id: DPF_1013
symbol: mqnB
gene_biotype: protein_coding
description:
  Futalosine nucleosidase; Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: DPF_1014
symbol: mqnD
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2); Belongs to the MqnA/MqnD family. MqnD subfamily.


ensembl_gene_id: DPF_1016
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist in  [...]


ensembl_gene_id: DPF_1022
symbol: der
gene_biotype: protein_coding
description:
  Ribosome-associated GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: DPF_1030
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: DPF_1043
symbol: DPF_1043
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.


ensembl_gene_id: DPF_1064
symbol: DPF_1064
gene_biotype: protein_coding
description:
  Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.


ensembl_gene_id: DPF_1076
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine tRNA ribosyltransferase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: DPF_1081
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: DPF_1083
symbol: mutM
gene_biotype: protein_coding
description:
  DNA-formamidopyrimidine glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: DPF_1085
symbol: DPF_1085
gene_biotype: protein_coding
description:
  RNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: DPF_1086
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: DPF_1087
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: DPF_1091
symbol: DPF_1091
gene_biotype: protein_coding
description:
  Flagellar basal body protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: DPF_1095
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: DPF_1096
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: DPF_1098
symbol: prmC
gene_biotype: protein_coding
description:
  protein-(glutamine-N5) methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: DPF_1099
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: DPF_1101
symbol: rex
gene_biotype: protein_coding
description:
  REX family transcriptional regulator; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: DPF_1102
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F0 subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: DPF_1103
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0F1 subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: DPF_1110
symbol: DPF_1110
gene_biotype: protein_coding
description:
  Chromosome replication initiation inhibitor protein; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: DPF_1145
symbol: DPF_1145
gene_biotype: protein_coding
description:
  NusB/RsmB/TIM44; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: DPF_1147
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: DPF_1148
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: DPF_1149
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: DPF_1157
symbol: glgB
gene_biotype: protein_coding
description:
  Glycogen branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: DPF_1159
symbol: aroA
gene_biotype: protein_coding
description:
  Fructose-bisphosphate aldolase; Catalyzes a transaldol reaction between 6-deoxy-5- ketofructose 1-phosphate (DKFP) and L-aspartate semialdehyde (ASA) with an elimination of hydroxypyruvaldehyde phosphate to yield 2-amino-3,7- dideoxy-D-threo-hept-6-ulosonate (ADH). Plays a key role in an alternative pathway of the biosynthesis of 3-dehydroquinate (DHQ), which is involved in the canonical pathway for the biosynthesis of aromatic amino acids.


ensembl_gene_id: DPF_1162
symbol: aroA-2
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: DPF_1180
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: DPF_1185
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit K 1; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: DPF_1186
symbol: DPF_1186
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: DPF_1188
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: DPF_1189
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: DPF_1191
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: DPF_1192
symbol: DPF_1192
gene_biotype: protein_coding
description:
  NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain.


ensembl_gene_id: DPF_1225
symbol: DPF_1225
gene_biotype: protein_coding
description:
  Nitrogen fixation protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.


ensembl_gene_id: DPF_1226
symbol: DPF_1226
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine.


ensembl_gene_id: DPF_1230
symbol: ade
gene_biotype: protein_coding
description:
  Adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.


ensembl_gene_id: DPF_1231
symbol: DPF_1231
gene_biotype: protein_coding
description:
  Cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: DPF_1243
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: DPF_1244
symbol: DPF_1244
gene_biotype: protein_coding
description:
  Spore coat protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: DPF_1246
symbol: trmL
gene_biotype: protein_coding
description:
  tRNA methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.


ensembl_gene_id: DPF_1251
symbol: glmS
gene_biotype: protein_coding
description:
  Glutamine amidotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: DPF_1252
symbol: DPF_1252
gene_biotype: protein_coding
description:
  Non-canonical purine NTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: DPF_1260
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: DPF_1264
symbol: DPF_1264
gene_biotype: protein_coding
description:
  Dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: DPF_1267
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: DPF_1277
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily.


ensembl_gene_id: DPF_1278
symbol: DPF_1278
gene_biotype: protein_coding
description:
  phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP; Belongs to the PRA-CH family.


ensembl_gene_id: DPF_1279
symbol: rlmN
gene_biotype: protein_coding
description:
  50S rRNA methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: DPF_1281
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: DPF_1282
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: DPF_1286
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: DPF_1287
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: DPF_1289
symbol: DPF_1289
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids.


ensembl_gene_id: DPF_1291
symbol: DPF_1291
gene_biotype: protein_coding
description:
  DNA-binding protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: DPF_1304
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: DPF_1306
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: DPF_1307
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase subunit alpha; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: DPF_1308
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: DPF_1367
symbol: DPF_1367
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: DPF_1368
symbol: yidC
gene_biotype: protein_coding
description:
  Membrane protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: DPF_1370
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: DPF_1371
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: DPF_1372
symbol: lpxK
gene_biotype: protein_coding
description:
  Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: DPF_1378
symbol: recA
gene_biotype: protein_coding
description:
  Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: DPF_1379
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: DPF_1384
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: DPF_1387
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: DPF_1396
symbol: mrdB
gene_biotype: protein_coding
description:
  Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: DPF_1398
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase F0 subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: DPF_1399
symbol: atpF-2
gene_biotype: protein_coding
description:
  ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: DPF_1400
symbol: atpH
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: DPF_1401
symbol: atpA
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: DPF_1402
symbol: atpG
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: DPF_1403
symbol: atpD
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: DPF_1404
symbol: atpC
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: DPF_1405
symbol: glmU
gene_biotype: protein_coding
description:
  N-acetylglucosamine-1-phosphate uridyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: DPF_1417
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: DPF_1418
symbol: gatA
gene_biotype: protein_coding
description:
  glutamyl-tRNA(Gln) amidotransferase; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: DPF_1419
symbol: gatC
gene_biotype: protein_coding
description:
  glutamyl-tRNA amidotransferase; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: DPF_1422
symbol: grpE
gene_biotype: protein_coding
description:
  Nucleotide exchange factor GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds [...]


ensembl_gene_id: DPF_1423
symbol: hrcA
gene_biotype: protein_coding
description:
  HrcA family transcriptional regulator; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: DPF_1424
symbol: DPF_1424
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.


ensembl_gene_id: DPF_1433
symbol: mqnE
gene_biotype: protein_coding
description:
  Aminofutalosine synthase MqnE; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate.


ensembl_gene_id: DPF_1435
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: DPF_1438
symbol: DPF_1438
gene_biotype: protein_coding
description:
  DNA-binding protein; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: DPF_1439
symbol: rlpA
gene_biotype: protein_coding
description:
  Lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: DPF_1447
symbol: deoC
gene_biotype: protein_coding
description:
  2-deoxyribose-5-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: DPF_1458
symbol: ribB
gene_biotype: protein_coding
description:
  3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.


ensembl_gene_id: DPF_1500
symbol: DPF_1500
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: DPF_1506
symbol: DPF_1506
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose.


ensembl_gene_id: DPF_1513
symbol: DPF_1513
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: DPF_1516
symbol: DPF_1516
gene_biotype: protein_coding
description:
  Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: DPF_1520
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding proten HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: DPF_1525
symbol: DPF_1525
gene_biotype: protein_coding
description:
  LysR family transcriptional regulator; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: DPF_1526
symbol: DPF_1526
gene_biotype: protein_coding
description:
  Molybdopterin biosynthesis protein MoeA; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: DPF_1547
symbol: plsY
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: DPF_1551
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: DPF_1556
symbol: DPF_1556
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: DPF_1565
symbol: DPF_1565
gene_biotype: protein_coding
description:
  Fmu (Sun) domain protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: DPF_1577
symbol: ilvE
gene_biotype: protein_coding
description:
  Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: DPF_1578
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: DPF_1579
symbol: DPF_1579
gene_biotype: protein_coding
description:
  Nucleoid-associated protein DP1429; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: DPF_1580
symbol: recR
gene_biotype: protein_coding
description:
  Recombinase RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: DPF_1581
symbol: recD2
gene_biotype: protein_coding
description:
  Heavy metal transporter; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.


ensembl_gene_id: DPF_1588
symbol: panC
gene_biotype: protein_coding
description:
  Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: DPF_1589
symbol: panB
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: DPF_1612
symbol: hslV
gene_biotype: protein_coding
description:
  ATP-dependent protease subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: DPF_1613
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent protease; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: DPF_1614
symbol: argB
gene_biotype: protein_coding
description:
  Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: DPF_1616
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit alpha; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: DPF_1622
symbol: DPF_1622
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: DPF_1642
symbol: hypA
gene_biotype: protein_coding
description:
  Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.


ensembl_gene_id: DPF_1657
symbol: rlpA-2
gene_biotype: protein_coding
description:
  Lipoprotein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: DPF_1664
symbol: acpS
gene_biotype: protein_coding
description:
  4'-phosphopantetheinyl transferase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: DPF_1665
symbol: nnrD
gene_biotype: protein_coding
description:
  Carbohydrate kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...]


ensembl_gene_id: DPF_1673
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: DPF_1695
symbol: nhaA
gene_biotype: protein_coding
description:
  Na+/H+ antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.


ensembl_gene_id: DPF_1700
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: DPF_1702
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine.


ensembl_gene_id: DPF_1703
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinic acid mononucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: DPF_1710
symbol: DPF_1710
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: DPF_1713
symbol: bioA
gene_biotype: protein_coding
description:
  Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.


ensembl_gene_id: DPF_1714
symbol: bioD
gene_biotype: protein_coding
description:
  Dithiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: DPF_1715
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: DPF_1718
symbol: DPF_1718
gene_biotype: protein_coding
description:
  8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.


ensembl_gene_id: DPF_1728
symbol: hpf
gene_biotype: protein_coding
description:
  Ribose ABC transporter permease; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: DPF_1729
symbol: DPF_1729
gene_biotype: protein_coding
description:
  RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: DPF_1735
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: DPF_1737
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: DPF_1750
symbol: DPF_1750
gene_biotype: protein_coding
description:
  Portal protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: DPF_1757
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: DPF_1758
symbol: moaC
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: DPF_1759
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: DPF_1760
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: DPF_1764
symbol: DPF_1764
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: DPF_1765
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: DPF_1766
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: DPF_1769
symbol: DPF_1769
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: DPF_1771
symbol: DPF_1771
gene_biotype: protein_coding
description:
  Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: DPF_1776
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: DPF_1781
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: DPF_1782
symbol: DPF_1782
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: DPF_1783
symbol: kdsB
gene_biotype: protein_coding
description:
  3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: DPF_1786
symbol: gmd
gene_biotype: protein_coding
description:
  GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.


ensembl_gene_id: DPF_1787
symbol: fcl
gene_biotype: protein_coding
description:
  GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.


ensembl_gene_id: DPF_1788
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: DPF_1789
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: DPF_1790
symbol: aat
gene_biotype: protein_coding
description:
  leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: DPF_1792
symbol: clpS
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: DPF_1806
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: DPF_1807
symbol: gcvPA
gene_biotype: protein_coding
description:
  Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.


ensembl_gene_id: DPF_1810
symbol: DPF_1810
gene_biotype: protein_coding
description:
  Septum formation inhibitor Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: DPF_1818
symbol: DPF_1818
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphatase; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).


ensembl_gene_id: DPF_1820
symbol: panD
gene_biotype: protein_coding
description:
  Aspartate decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: DPF_1825
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: DPF_1827
symbol: DPF_1827
gene_biotype: protein_coding
description:
  Formate dehydrogenase subunit alpha; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: DPF_1831
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: DPF_1832
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.


ensembl_gene_id: DPF_1833
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: DPF_1834
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: DPF_1835
symbol: DPF_1835
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: DPF_1836
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: DPF_1856
symbol: DPF_1856
gene_biotype: protein_coding
description:
  Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: DPF_1902
symbol: gmhA
gene_biotype: protein_coding
description:
  Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.


ensembl_gene_id: DPF_1904
symbol: hemC
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: DPF_1909
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: DPF_1911
symbol: ubiX
gene_biotype: protein_coding
description:
  Phenolic acid decarboxylase subunit B; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: DPF_1923
symbol: moaA
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MoeA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: DPF_1925
symbol: DPF_1925
gene_biotype: protein_coding
description:
  Cell envelope biogenesis protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: DPF_1929
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: DPF_1940
symbol: thiC
gene_biotype: protein_coding
description:
  Phosphomethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.


ensembl_gene_id: DPF_1944
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: DPF_1951
symbol: DPF_1951
gene_biotype: protein_coding
description:
  Chemotaxis protein; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.


ensembl_gene_id: DPF_1971
symbol: DPF_1971
gene_biotype: protein_coding
description:
  Cardiolipin synthetase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.


ensembl_gene_id: DPF_1983
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: DPF_1984
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: DPF_1986
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: DPF_1994
symbol: xerC
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: DPF_1998
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: DPF_2003
symbol: DPF_2003
gene_biotype: protein_coding
description:
  Hydrogenase maturation protein HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide.


ensembl_gene_id: DPF_2008
symbol: selA
gene_biotype: protein_coding
description:
  Selenocysteine synthase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.


ensembl_gene_id: DPF_2023
symbol: DPF_2023
gene_biotype: protein_coding
description:
  Hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: DPF_2032
symbol: tpx
gene_biotype: protein_coding
description:
  2-Cys peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.


ensembl_gene_id: DPF_2033
symbol: DPF_2033
gene_biotype: protein_coding
description:
  Type I glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: DPF_2038
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification protein; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: DPF_2045
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: DPF_2046
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: DPF_2051
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: DPF_2052
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: DPF_2054
symbol: pyrR
gene_biotype: protein_coding
description:
  Bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.


ensembl_gene_id: DPF_2061
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: DPF_2064
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: DPF_2076
symbol: DPF_2076
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: DPF_2090
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: DPF_2152
symbol: DPF_2152
gene_biotype: protein_coding
description:
  Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.


ensembl_gene_id: DPF_2158
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: DPF_2159
symbol: cas1
gene_biotype: protein_coding
description:
  Subtype I-C CRISPR-associated endonuclease Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: DPF_2160
symbol: DPF_2160
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas4; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.


ensembl_gene_id: DPF_2165
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: DPF_2166
symbol: mqnA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: DPF_2176
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: DPF_2181
symbol: atpD-2
gene_biotype: protein_coding
description:
  ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: DPF_2185
symbol: atpB-2
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: DPF_2186
symbol: atpE-2
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: DPF_2192
symbol: pfkA
gene_biotype: protein_coding
description:
  Diphosphate--fructose-6-phosphate 1-phosphotransferase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP-dependent clade 'X' sub-subfamily.


ensembl_gene_id: DPF_2196
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: DPF_2200
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: DPF_2203
symbol: trpB-2
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: DPF_2204
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase susbunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: DPF_2205
symbol: selO
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.


ensembl_gene_id: DPF_2248
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: DPF_2259
symbol: tatA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: DPF_2260
symbol: DPF_2260
gene_biotype: protein_coding
description:
  CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: DPF_2264
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: DPF_2265
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: DPF_2270
symbol: ftsY
gene_biotype: protein_coding
description:
  Cell division protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.


ensembl_gene_id: DPF_2275
symbol: ispDF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF).


ensembl_gene_id: DPF_2276
symbol: gltX-2
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: DPF_2281
symbol: DPF_2281
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: DPF_2283
symbol: hldD
gene_biotype: protein_coding
description:
  ADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily.


ensembl_gene_id: DPF_2284
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: DPF_2285
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: DPF_2300
symbol: rsmA
gene_biotype: protein_coding
description:
  Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: DPF_2301
symbol: DPF_2301
gene_biotype: protein_coding
description:
  DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: DPF_2304
symbol: mutS2
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: DPF_2305
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: DPF_2306
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase sigma-70 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: DPF_2310
symbol: DPF_2310
gene_biotype: protein_coding
description:
  Trk system potassium transporter TrkH; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.


ensembl_gene_id: DPF_2315
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: DPF_2317
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: DPF_2322
symbol: mtaD
gene_biotype: protein_coding
description:
  Chlorohydrolase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family.


ensembl_gene_id: DPF_2330
symbol: lpxB
gene_biotype: protein_coding
description:
  Sugar synthetase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: DPF_2337
symbol: pnp
gene_biotype: protein_coding
description:
  Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: DPF_2338
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: DPF_2339
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine(55) synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: DPF_2341
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: DPF_2343
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: DPF_2344
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription termination factor NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: DPF_2345
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: DPF_2350
symbol: flgH
gene_biotype: protein_coding
description:
  Flagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: DPF_2351
symbol: flgI
gene_biotype: protein_coding
description:
  Flagellar basal body P-ring biosynthesis protein FlgA; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: DPF_2356
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.


ensembl_gene_id: DPF_2357
symbol: fliW
gene_biotype: protein_coding
description:
  Flagellar assembly protein FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.


ensembl_gene_id: DPF_2360
symbol: nadK
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: DPF_2364
symbol: gatB
gene_biotype: protein_coding
description:
  glutamyl-tRNA amidotransferase; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: DPF_2365
symbol: mtnA
gene_biotype: protein_coding
description:
  Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: DPF_2379
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: DPF_2381
symbol: DPF_2381
gene_biotype: protein_coding
description:
  ParA/MinD-like ATPase; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: DPF_2388
symbol: purT
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family.


ensembl_gene_id: DPF_2394
symbol: DPF_2394
gene_biotype: protein_coding
description:
  Membrane protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: DPF_2395
symbol: DPF_2395
gene_biotype: protein_coding
description:
  Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.


ensembl_gene_id: DPF_2396
symbol: menA
gene_biotype: protein_coding
description:
  1,4-dihydroxy-2-naphthoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.


ensembl_gene_id: DPF_2420
symbol: DPF_2420
gene_biotype: protein_coding
description:
  Branched-chain amino acid transporter permease subunit LivH; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: DPF_2424
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine 5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: DPF_2427
symbol: tatC
gene_biotype: protein_coding
description:
  Preprotein translocase subunit TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: DPF_2434
symbol: nfo
gene_biotype: protein_coding
description:
  Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.


ensembl_gene_id: DPF_2440
symbol: azoR
gene_biotype: protein_coding
description:
  FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.


ensembl_gene_id: DPF_2442
symbol: ahcY
gene_biotype: protein_coding
description:
  Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: DPF_2444
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: DPF_2463
symbol: DPF_2463
gene_biotype: protein_coding
description:
  Lytic transglycosylase F; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella. In the N-terminal section; belongs to the bacterial solute- binding protein 3 family.


ensembl_gene_id: DPF_2474
symbol: xerC-2
gene_biotype: protein_coding
description:
  Integrase; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: DPF_2502
symbol: miaB
gene_biotype: protein_coding
description:
  (dimethylallyl)adenosine tRNA methylthiotransferase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: DPF_2509
symbol: pal
gene_biotype: protein_coding
description:
  Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: DPF_2521
symbol: rlmH
gene_biotype: protein_coding
description:
  50S rRNA methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: DPF_2528
symbol: engB
gene_biotype: protein_coding
description:
  GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: DPF_2529
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: DPF_2533
symbol: cheB
gene_biotype: protein_coding
description:
  Chemotaxis protein CheY; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: DPF_2539
symbol: uppP
gene_biotype: protein_coding
description:
  UDP-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: DPF_2552
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: DPF_2553
symbol: DPF_2553
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: DPF_2568
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: DPF_2570
symbol: prs
gene_biotype: protein_coding
description:
  Phosphoribosylpyrophosphate synthetase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: DPF_2571
symbol: rplY
gene_biotype: protein_coding
description:
  50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: DPF_2572
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: DPF_2575
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: DPF_2576
symbol: DPF_2576
gene_biotype: protein_coding
description:
  NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.


ensembl_gene_id: DPF_2578
symbol: yajC
gene_biotype: protein_coding
description:
  Preprotein translocase subunit YajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.


ensembl_gene_id: DPF_2579
symbol: secD
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: DPF_2580
symbol: secF
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: DPF_2617
symbol: potA
gene_biotype: protein_coding
description:
  Putrescine/spermidine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.


ensembl_gene_id: DPF_2620
symbol: DPF_2620
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.


ensembl_gene_id: DPF_2639
symbol: DPF_2639
gene_biotype: protein_coding
description:
  23S rRNA (adenine(2503)-C(2))-methyltransferase; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: DPF_2641
symbol: crcB
gene_biotype: protein_coding
description:
  Chromosome condensation protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: DPF_2645
symbol: DPF_2645
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: DPF_2664
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: DPF_2665
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: DPF_2675
symbol: argD
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: DPF_2676
symbol: DPF_2676
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.


ensembl_gene_id: DPF_2679
symbol: trmH
gene_biotype: protein_coding
description:
  tRNA methyltransferase; Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: DPF_2680
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: DPF_2692
symbol: argJ
gene_biotype: protein_coding
description:
  Ornithine acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: DPF_2693
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: DPF_2695
symbol: smpB
gene_biotype: protein_coding
description:
  Single-stranded DNA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome t [...]


ensembl_gene_id: DPF_2696
symbol: DPF_2696
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: DPF_2699
symbol: rsmI
gene_biotype: protein_coding
description:
  rRNA (cytidine-2'-O-)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: DPF_2702
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: DPF_2703
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: DPF_2704
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: DPF_2707
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual componen [...]


# pathwayInfo

id: CL:101
description: Mixed, incl. Ribonucleoprotein, and Purine nucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:101_Mixed,_incl._Ribonucleoprotein,_and_Purine_nucleoside_triphosphate_biosynthetic_process


id: CL:1019
description: De novo UMP biosynthetic process, and Permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1019_De_novo_UMP_biosynthetic_process,_and_Permease_family


id: CL:102
description: Mixed, incl. Ribonucleoprotein, and Purine nucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:102_Mixed,_incl._Ribonucleoprotein,_and_Purine_nucleoside_triphosphate_biosynthetic_process


id: CL:1023
description: De novo UMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1023_De_novo_UMP_biosynthetic_process


id: CL:103
description: Ribonucleoprotein, and Purine nucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:103_Ribonucleoprotein,_and_Purine_nucleoside_triphosphate_biosynthetic_process


id: CL:1044
description: GMP biosynthetic process, and Nucleoside phosphate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1044_GMP_biosynthetic_process,_and_Nucleoside_phosphate_catabolic_process


id: CL:1047
description: GMP biosynthetic process, and 5-nucleotidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1047_GMP_biosynthetic_process,_and_5-nucleotidase_activity


id: CL:105
description: Ribosome, and Purine nucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:105_Ribosome,_and_Purine_nucleoside_triphosphate_biosynthetic_process


id: CL:106
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:106_Ribosome,_and_Translation_regulator_activity


id: CL:1074
description: Mixed, incl. Carbon metabolism, and Oxidoreductase activity, acting on NAD(P)H
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1074_Mixed,_incl._Carbon_metabolism,_and_Oxidoreductase_activity,_acting_on_NAD(P)H


id: CL:1075
description: Carbon metabolism, and Oxidoreductase activity, acting on NAD(P)H
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1075_Carbon_metabolism,_and_Oxidoreductase_activity,_acting_on_NAD(P)H


id: CL:1076
description: Carbon metabolism, and Fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1076_Carbon_metabolism,_and_Fatty_acid_metabolic_process


id: CL:1077
description: Carbon metabolism, and Glutamate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1077_Carbon_metabolism,_and_Glutamate_metabolic_process


id: CL:1078
description: Citrate cycle (TCA cycle), and Glyoxylate and dicarboxylate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1078_Citrate_cycle_(TCA_cycle),_and_Glyoxylate_and_dicarboxylate_metabolism


id: CL:1079
description: Citrate cycle (TCA cycle), and AMP-binding, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1079_Citrate_cycle_(TCA_cycle),_and_AMP-binding,_conserved_site


id: CL:1081
description: Citrate cycle (TCA cycle), and Pyruvate, water dikinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1081_Citrate_cycle_(TCA_cycle),_and_Pyruvate,_water_dikinase_activity


id: CL:1083
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1083_Pyruvate:ferredoxin_oxidoreductase_core_domain_II,_and_Pyruvate_ferredoxin/flavodoxin_oxidoreductase

description:
  Pyruvate:ferredoxin oxidoreductase core domain II, and Pyruvate ferredoxin/flavodoxin oxidoreductase


id: CL:109
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:109_Ribosome,_and_Translation_regulator_activity


id: CL:1106
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1106_Tricarboxylic_acid_cycle,_and_Succinate_dehydrogenase/fumarate_reductase_flavoprotein,_catalytic_domain_superfamily

description:
  Tricarboxylic acid cycle, and Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily


id: CL:1123
description: AMP binding, and Protein acylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1123_AMP_binding,_and_Protein_acylation


id: CL:113
description: Structural constituent of ribosome, and Translation elongation factor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:113_Structural_constituent_of_ribosome,_and_Translation_elongation_factor_activity


id: CL:1136
description: Mixed, incl. Glycine metabolic process, and Glutamate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1136_Mixed,_incl._Glycine_metabolic_process,_and_Glutamate_biosynthetic_process


id: CL:1137
description: Glycine metabolic process, and Diphosphotransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1137_Glycine_metabolic_process,_and_Diphosphotransferase_activity


id: CL:1138
description: Mixed, incl. Diphosphotransferase activity, and Biotin/lipoate A/B protein ligase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1138_Mixed,_incl._Diphosphotransferase_activity,_and_Biotin/lipoate_A/B_protein_ligase_family


id: CL:1159
description: Glutamate biosynthetic process, and Ammonia ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1159_Glutamate_biosynthetic_process,_and_Ammonia_ligase_activity


id: CL:116
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:116_Structural_constituent_of_ribosome


id: CL:1171
description: Pentose phosphate pathway, and Glycolytic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1171_Pentose_phosphate_pathway,_and_Glycolytic_process


id: CL:1173
description: Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1173_Pentose_phosphate_pathway,_and_Glycolysis


id: CL:1175
description: Glycolytic process, and Sugar-phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1175_Glycolytic_process,_and_Sugar-phosphatase_activity


id: CL:1177
description: Glyceraldehyde-3-phosphate dehydrogenase, type I, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1177_Glyceraldehyde-3-phosphate_dehydrogenase,_type_I,_and_Glycolysis


id: CL:1193
description: Sugar-phosphatase activity, and Aldolase FbaB-like, archaeal-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1193_Sugar-phosphatase_activity,_and_Aldolase_FbaB-like,_archaeal-type


id: CL:120
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:120_Structural_constituent_of_ribosome


id: CL:1213
description: Glucose 6-phosphate metabolic process, and Pyridine nucleotide-disulphide oxidoreductase, class I
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1213_Glucose_6-phosphate_metabolic_process,_and_Pyridine_nucleotide-disulphide_oxidoreductase,_class_I


id: CL:1224
description: Mixed, incl. Fatty acid biosynthetic process, and Thioesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1224_Mixed,_incl._Fatty_acid_biosynthetic_process,_and_Thioesterase


id: CL:1227
description: Fatty acid biosynthetic process, and Thioesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1227_Fatty_acid_biosynthetic_process,_and_Thioesterase


id: CL:1228
description: Fatty acid biosynthesis, and Biotin carboxylation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1228_Fatty_acid_biosynthesis,_and_Biotin_carboxylation_domain


id: CL:1230
description: Fatty acid biosynthesis, and Polyketide synthase, C-terminal extension
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1230_Fatty_acid_biosynthesis,_and_Polyketide_synthase,_C-terminal_extension


id: CL:1246
description: Polyketide synthase, C-terminal extension, and Thioesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1246_Polyketide_synthase,_C-terminal_extension,_and_Thioesterase


id: CL:125
description: Mixed, incl. Large ribosomal subunit, and KOW (Kyprides, Ouzounis, Woese) motif.
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:125_Mixed,_incl._Large_ribosomal_subunit,_and_KOW_(Kyprides,_Ouzounis,_Woese)_motif.


id: CL:1263
description: Phosphopantetheine attachment site, and Protein phosphopantetheinylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1263_Phosphopantetheine_attachment_site,_and_Protein_phosphopantetheinylation


id: CL:1287
description: Quinone binding, and Proton-conducting membrane transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1287_Quinone_binding,_and_Proton-conducting_membrane_transporter


id: CL:1291
description: Quinone, and NADH dehydrogenase (ubiquinone) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1291_Quinone,_and_NADH_dehydrogenase_(ubiquinone)_activity


id: CL:1320
description: Mixed, incl. Choline catabolic process, and Iron-type alcohol dehydrogenase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1320_Mixed,_incl._Choline_catabolic_process,_and_Iron-type_alcohol_dehydrogenase-like


id: CL:1322
description: Iron-type alcohol dehydrogenase-like, and GroES-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1322_Iron-type_alcohol_dehydrogenase-like,_and_GroES-like_superfamily


id: CL:1345
description: Mixed, incl. Vitamin biosynthetic process, and Pyridine nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1345_Mixed,_incl._Vitamin_biosynthetic_process,_and_Pyridine_nucleotide_biosynthetic_process


id: CL:1346
description: Mixed, incl. Riboflavin metabolic process, and Pteridine-containing compound biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1346_Mixed,_incl._Riboflavin_metabolic_process,_and_Pteridine-containing_compound_biosynthetic_process


id: CL:1347
description: Riboflavin metabolic process, and Folic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1347_Riboflavin_metabolic_process,_and_Folic_acid_metabolic_process


id: CL:1363
description: RelA/SpoT, and Tetratricopeptide repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1363_RelA/SpoT,_and_Tetratricopeptide_repeats


id: CL:1372
description: Dihydrobiopterin metabolic process, and D-amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1372_Dihydrobiopterin_metabolic_process,_and_D-amino_acid_metabolic_process


id: CL:1381
description: Mixed, incl. Pyridine nucleotide biosynthetic process, and Pantothenate biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1381_Mixed,_incl._Pyridine_nucleotide_biosynthetic_process,_and_Pantothenate_biosynthesis


id: CL:1382
description: Pyridine nucleotide biosynthetic process, and Cupin 2, conserved barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1382_Pyridine_nucleotide_biosynthetic_process,_and_Cupin_2,_conserved_barrel


id: CL:1385
description: Nicotinamide nucleotide biosynthetic process, and NUDIX hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1385_Nicotinamide_nucleotide_biosynthetic_process,_and_NUDIX_hydrolase


id: CL:140
description: tRNA-binding, and Large ribosomal subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:140_tRNA-binding,_and_Large_ribosomal_subunit


id: CL:1416
description: Mixed, incl. Oxidoreductase activity, acting on a sulfur group of donors, and Iron ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1416_Mixed,_incl._Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_and_Iron_ion_binding


id: CL:1417
description: Mixed, incl. Cellular oxidant detoxification, and Iron-sulfur cluster assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1417_Mixed,_incl._Cellular_oxidant_detoxification,_and_Iron-sulfur_cluster_assembly


id: CL:1418
description: Mixed, incl. Thioredoxin-like superfamily, and Iron-sulfur cluster assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1418_Mixed,_incl._Thioredoxin-like_superfamily,_and_Iron-sulfur_cluster_assembly


id: CL:1419
description: Mixed, incl. Thioredoxin-like superfamily, and Reactive oxygen species metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1419_Mixed,_incl._Thioredoxin-like_superfamily,_and_Reactive_oxygen_species_metabolic_process


id: CL:1420
description: Thioredoxin domain, and Reactive oxygen species metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1420_Thioredoxin_domain,_and_Reactive_oxygen_species_metabolic_process


id: CL:1421
description: Oxidoreductase activity, acting on a sulfur group of donors, and Peroxiredoxin activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1421_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_and_Peroxiredoxin_activity


id: CL:1422
description: Response to superoxide, and Peroxiredoxin activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1422_Response_to_superoxide,_and_Peroxiredoxin_activity


id: CL:1435
description: Disulfide oxidoreductase activity, and Mss4-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1435_Disulfide_oxidoreductase_activity,_and_Mss4-like_superfamily


id: CL:1444
description: Thioredoxin peroxidase activity, and Reactive oxygen species metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1444_Thioredoxin_peroxidase_activity,_and_Reactive_oxygen_species_metabolic_process


id: CL:1453
description: Mixed, incl. Arylsulfotransferase, bacteria, and Sodium Bile acid symporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1453_Mixed,_incl._Arylsulfotransferase,_bacteria,_and_Sodium_Bile_acid_symporter_family


id: CL:1464
description: NifU-like N terminal domain, and Cysteine desulfurase
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1464_NifU-like_N_terminal_domain,_and_Cysteine_desulfurase


id: CL:1466
description: NifU-like N terminal domain, and Cysteine desulfurase NifS, bacterial/archaeal
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1466_NifU-like_N_terminal_domain,_and_Cysteine_desulfurase_NifS,_bacterial/archaeal


id: CL:1486
description: Mixed, incl. Rubredoxin-like domain, and Armadillo-type fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1486_Mixed,_incl._Rubredoxin-like_domain,_and_Armadillo-type_fold


id: CL:1507
description: Mixed, incl. Deoxyribonucleoside triphosphate metabolic process, and Cobalamin
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1507_Mixed,_incl._Deoxyribonucleoside_triphosphate_metabolic_process,_and_Cobalamin


id: CL:1509
description: Mixed, incl. Cobalamin, and Photosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1509_Mixed,_incl._Cobalamin,_and_Photosynthesis


id: CL:1519
description: Deoxyribonucleoside triphosphate metabolic process, and Flavoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1519_Deoxyribonucleoside_triphosphate_metabolic_process,_and_Flavoprotein


id: CL:1535
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and Anion channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1535_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_Anion_channel_activity


id: CL:1536
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and Anion channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1536_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_Anion_channel_activity


id: CL:1537
description: tRNA threonylcarbamoyladenosine modification, and Radical SAM, C-terminal extension
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1537_tRNA_threonylcarbamoyladenosine_modification,_and_Radical_SAM,_C-terminal_extension


id: CL:155
description: Small ribosomal subunit, and rRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:155_Small_ribosomal_subunit,_and_rRNA-binding


id: CL:1551
description: Mixed, incl. Anion channel activity, and Glutamate racemase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1551_Mixed,_incl._Anion_channel_activity,_and_Glutamate_racemase_activity


id: CL:1564
description: Mixed, incl. TRAM domain, and Glutamate racemase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1564_Mixed,_incl._TRAM_domain,_and_Glutamate_racemase_activity


id: CL:1580
description: Mixed, incl. Stomatin/HflK family, and TAT protein transport complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1580_Mixed,_incl._Stomatin/HflK_family,_and_TAT_protein_transport_complex


id: CL:1581
description: Mixed, incl. Stomatin/HflK family, and TAT protein transport complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1581_Mixed,_incl._Stomatin/HflK_family,_and_TAT_protein_transport_complex


id: CL:1583
description: TAT protein transport complex, and Stomatin/HflK family
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1583_TAT_protein_transport_complex,_and_Stomatin/HflK_family


id: CL:1599
description: Mixed, incl. Stomatin/HflK family, and ClpP/crotonase-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1599_Mixed,_incl._Stomatin/HflK_family,_and_ClpP/crotonase-like_domain_superfamily


id: CL:1610
description: Mixed, incl. Cupin 2, conserved barrel, and AMP-binding, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1610_Mixed,_incl._Cupin_2,_conserved_barrel,_and_AMP-binding,_conserved_site


id: CL:1625
description: Mixed, incl. Aminoglycan metabolic process, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1625_Mixed,_incl._Aminoglycan_metabolic_process,_and_Cell_division


id: CL:1626
description: Mixed, incl. Cell division, and Aminoglycan metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1626_Mixed,_incl._Cell_division,_and_Aminoglycan_metabolic_process


id: CL:1628
description: Mixed, incl. Aminoglycan metabolic process, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1628_Mixed,_incl._Aminoglycan_metabolic_process,_and_Cell_division_site


id: CL:1630
description: Mixed, incl. Aminoglycan metabolic process, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1630_Mixed,_incl._Aminoglycan_metabolic_process,_and_Cell_division_site


id: CL:1631
description: Mixed, incl. Regulation of cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1631_Mixed,_incl._Regulation_of_cell_shape,_and_Cell_division_site


id: CL:1632
description: Cell cycle, and Peptidoglycan muralytic activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1632_Cell_cycle,_and_Peptidoglycan_muralytic_activity


id: CL:1634
description: Cell cycle, and D-alanine-D-alanine ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1634_Cell_cycle,_and_D-alanine-D-alanine_ligase_activity


id: CL:1639
description: Mur ligase, central, and Lipid modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1639_Mur_ligase,_central,_and_Lipid_modification


id: CL:1668
description: Peptidoglycan muralytic activity, and SPOR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1668_Peptidoglycan_muralytic_activity,_and_SPOR_domain


id: CL:1680
description: Mixed, incl. MreB/Mbl protein, and Cell cycle protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1680_Mixed,_incl._MreB/Mbl_protein,_and_Cell_cycle_protein


id: CL:1695
description: Peptidase M23, and Carboxypeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1695_Peptidase_M23,_and_Carboxypeptidase_activity


id: CL:1721
description: Mixed, incl. 5-deoxynucleotidase activity, and PDZ domain 6
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1721_Mixed,_incl._5-deoxynucleotidase_activity,_and_PDZ_domain_6


id: CL:1738
description: Mixed, incl. GIY-YIG endonuclease, and Transglutaminase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1738_Mixed,_incl._GIY-YIG_endonuclease,_and_Transglutaminase-like


id: CL:1764
description: Mixed, incl. DNA integration, and HIT-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1764_Mixed,_incl._DNA_integration,_and_HIT-like_superfamily


id: CL:1782
description: Phosphotransferase system (PTS), and cAMP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1782_Phosphotransferase_system_(PTS),_and_cAMP_metabolic_process


id: CL:1783
description: Phosphotransferase system (PTS)
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1783_Phosphotransferase_system_(PTS)


id: CL:1785
description: Phosphotransferase system (PTS)
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1785_Phosphotransferase_system_(PTS)


id: CL:1802
description: Mixed, incl. cAMP metabolic process, and DNA unwinding involved in DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1802_Mixed,_incl._cAMP_metabolic_process,_and_DNA_unwinding_involved_in_DNA_replication


id: CL:1811
description: Mixed, incl. Iron-sulfur cluster binding, and Organic hydroxy compound metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1811_Mixed,_incl._Iron-sulfur_cluster_binding,_and_Organic_hydroxy_compound_metabolic_process


id: CL:1812
description: Mixed, incl. Methane metabolism, and 4Fe-4S ferredoxin, iron-sulphur binding, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1812_Mixed,_incl._Methane_metabolism,_and_4Fe-4S_ferredoxin,_iron-sulphur_binding,_conserved_site


id: CL:1814
description: Mixed, incl. Methane metabolism, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1814_Mixed,_incl._Methane_metabolism,_and_Sulfur_metabolism


id: CL:1815
description: Mixed, incl. Methane metabolism, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1815_Mixed,_incl._Methane_metabolism,_and_Sulfur_metabolism


id: CL:1816
description: Mixed, incl. Methane metabolism, and 4Fe-4S ferredoxin, iron-sulphur binding, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1816_Mixed,_incl._Methane_metabolism,_and_4Fe-4S_ferredoxin,_iron-sulphur_binding,_conserved_site


id: CL:1817
description: Methane metabolism, and Lactate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1817_Methane_metabolism,_and_Lactate_metabolic_process


id: CL:1818
description: Methane metabolism, and Lactate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1818_Methane_metabolism,_and_Lactate_metabolic_process


id: CL:1820
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1820_Mixed,_incl._H(2):CoB-CoM_heterodisulfide,ferredoxin_reductase_subunit_A-like,_and_NADH_metabolic_process

description:
  Mixed, incl. H(2):CoB-CoM heterodisulfide,ferredoxin reductase subunit A-like, and NADH metabolic process


id: CL:1822
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1822_Mixed,_incl._H(2):CoB-CoM_heterodisulfide,ferredoxin_reductase_subunit_A-like,_and_Methyl-viologen-reducing_hydrogenase,_delta_subunit

description:
  Mixed, incl. H(2):CoB-CoM heterodisulfide,ferredoxin reductase subunit A-like, and Methyl-viologen-reducing hydrogenase, delta subunit


id: CL:1824
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1824_H(2):CoB-CoM_heterodisulfide,ferredoxin_reductase_subunit_A-like,_and_Cytochrome_c-like_domain_superfamily

description:
  H(2):CoB-CoM heterodisulfide,ferredoxin reductase subunit A-like, and Cytochrome c-like domain superfamily


id: CL:184
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:184_Structural_constituent_of_ribosome


id: CL:1850
description: Mixed, incl. NADH metabolic process, and Peptidase A31 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1850_Mixed,_incl._NADH_metabolic_process,_and_Peptidase_A31_family


id: CL:1868
description: Lactate metabolic process, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1868_Lactate_metabolic_process,_and_4Fe-4S_dicluster_domain


id: CL:1870
description: LUD domain, and FAD-linked oxidase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1870_LUD_domain,_and_FAD-linked_oxidase,_C-terminal


id: CL:188
description: Mixed, incl. L28p-like, and Large ribosomal subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:188_Mixed,_incl._L28p-like,_and_Large_ribosomal_subunit


id: CL:1889
description: glycerol-3-phosphate dehydrogenase (quinone) activity, and Cellular carbohydrate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1889_glycerol-3-phosphate_dehydrogenase_(quinone)_activity,_and_Cellular_carbohydrate_catabolic_process


id: CL:1903
description: Mixed, incl. Molybdopterin cofactor binding, and Rhodanese Homology Domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1903_Mixed,_incl._Molybdopterin_cofactor_binding,_and_Rhodanese_Homology_Domain


id: CL:1904
description: Mixed, incl. Molybdopterin cofactor binding, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1904_Mixed,_incl._Molybdopterin_cofactor_binding,_and_4Fe-4S_dicluster_domain


id: CL:1906
description: Molybdopterin cofactor binding, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1906_Molybdopterin_cofactor_binding,_and_4Fe-4S_dicluster_domain


id: CL:1908
description: Formate dehydrogenase complex, and Formate dehydrogenase iron-sulphur subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1908_Formate_dehydrogenase_complex,_and_Formate_dehydrogenase_iron-sulphur_subunit


id: CL:1920
description: Anaerobic respiration, and Multiheme cytochrome superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1920_Anaerobic_respiration,_and_Multiheme_cytochrome_superfamily


id: CL:1946
description: Rhodanese Homology Domain, and FAD-linked oxidase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1946_Rhodanese_Homology_Domain,_and_FAD-linked_oxidase,_C-terminal


id: CL:1967
description: Mixed, incl. Sulfur metabolism, and Nitrate assimilation
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1967_Mixed,_incl._Sulfur_metabolism,_and_Nitrate_assimilation


id: CL:1968
description: Sulfur metabolism, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1968_Sulfur_metabolism,_and_4Fe-4S_binding_domain


id: CL:1969
description: Mixed, incl. Nitrite and sulphite reductase 4Fe-4S domain, and NrfD family
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1969_Mixed,_incl._Nitrite_and_sulphite_reductase_4Fe-4S_domain,_and_NrfD_family


id: CL:1972
description: Mixed, incl. NrfD family, and Nitrate assimilation
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1972_Mixed,_incl._NrfD_family,_and_Nitrate_assimilation


id: CL:1989
description: Hydrogen sulfide metabolic process, and Sulfate reduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:1989_Hydrogen_sulfide_metabolic_process,_and_Sulfate_reduction


id: CL:2003
description: Mixed, incl. Putative zinc- or iron-chelating domain, and Peptidase U32
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2003_Mixed,_incl._Putative_zinc-_or_iron-chelating_domain,_and_Peptidase_U32


id: CL:2006
description: Mixed, incl. Tetratricopeptide repeat 2, and Putative zinc- or iron-chelating domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2006_Mixed,_incl._Tetratricopeptide_repeat_2,_and_Putative_zinc-_or_iron-chelating_domain


id: CL:2027
description: ATPase complex, and HupF/HypC family
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2027_ATPase_complex,_and_HupF/HypC_family


id: CL:2041
description: 3Fe-4S, and Nickel-dependent hydrogenase, large subunit, nickel binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2041_3Fe-4S,_and_Nickel-dependent_hydrogenase,_large_subunit,_nickel_binding_site


id: CL:2061
description: Mixed, incl. Prismane-like superfamily, and Formylmethanofuran dehydrogenase, subunit E domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2061_Mixed,_incl._Prismane-like_superfamily,_and_Formylmethanofuran_dehydrogenase,_subunit_E_domain


id: CL:2077
description: Mixed, incl. Prosthetic group metabolic process, and Thiamine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2077_Mixed,_incl._Prosthetic_group_metabolic_process,_and_Thiamine_metabolic_process


id: CL:2079
description: Prosthetic group metabolic process, and Thiamine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2079_Prosthetic_group_metabolic_process,_and_Thiamine_metabolic_process


id: CL:2080
description: Prosthetic group metabolic process, and Purine nucleobase metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2080_Prosthetic_group_metabolic_process,_and_Purine_nucleobase_metabolic_process


id: CL:2081
description: Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2081_Prosthetic_group_metabolic_process


id: CL:2083
description: Molybdenum cofactor biosynthesis, and MoaB/Mog domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2083_Molybdenum_cofactor_biosynthesis,_and_MoaB/Mog_domain


id: CL:2101
description: Purine nucleobase metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2101_Purine_nucleobase_metabolic_process


id: CL:2113
description: Thiamine metabolic process, and tRNA thiolation protein, TtcA/Ctu1 type
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2113_Thiamine_metabolic_process,_and_tRNA_thiolation_protein,_TtcA/Ctu1_type


id: CL:2115
description: Thiamine metabolic process, and Aldehyde ferredoxin oxidoreductase, domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2115_Thiamine_metabolic_process,_and_Aldehyde_ferredoxin_oxidoreductase,_domain_2


id: CL:2143
description: Mixed, incl. Benzoate degradation, and Translational readthrough
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2143_Mixed,_incl._Benzoate_degradation,_and_Translational_readthrough


id: CL:2145
description: Translational readthrough, and Selenocysteine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2145_Translational_readthrough,_and_Selenocysteine_metabolic_process


id: CL:2169
description: Mixed, incl. Phospholipid metabolism, and Transmembrane protein TMEM64
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2169_Mixed,_incl._Phospholipid_metabolism,_and_Transmembrane_protein_TMEM64


id: CL:2171
description: Mixed, incl. Phospholipid metabolism, and Transmembrane protein TMEM64
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2171_Mixed,_incl._Phospholipid_metabolism,_and_Transmembrane_protein_TMEM64


id: CL:2174
description: Mixed, incl. Phosphotransferase enzyme family, and Thiosulphate sulfurtransferase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2174_Mixed,_incl._Phosphotransferase_enzyme_family,_and_Thiosulphate_sulfurtransferase,_conserved_site


id: CL:2244
description: PAS domain, and Two-component regulatory system
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2244_PAS_domain,_and_Two-component_regulatory_system


id: CL:2247
description: PAS domain, and CheW-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2247_PAS_domain,_and_CheW-like_domain


id: CL:2250
description: PAS domain, and CheW-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2250_PAS_domain,_and_CheW-like_domain


id: CL:2251
description: PAS domain, and Two-component regulatory system
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2251_PAS_domain,_and_Two-component_regulatory_system


id: CL:2254
description: PAS domain, and Two-component regulatory system
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2254_PAS_domain,_and_Two-component_regulatory_system


id: CL:2261
description: PAC motif, and Signal transduction histidine kinase, dimerisation/phosphoacceptor domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2261_PAC_motif,_and_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain


id: CL:2265
description: CheW-like domain, and Signal transduction histidine kinase, dimerisation/phosphoacceptor domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2265_CheW-like_domain,_and_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain


id: CL:2305
description: CheW-like domain, and Single Cache domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2305_CheW-like_domain,_and_Single_Cache_domain_2


id: CL:235
description: Mixed, incl. UTP metabolic process, and Translation elongation factor EF1B/ribosomal protein S6
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:235_Mixed,_incl._UTP_metabolic_process,_and_Translation_elongation_factor_EF1B/ribosomal_protein_S6


id: CL:2351
description: PAS-associated, C-terminal, and cheY-homologous receiver domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2351_PAS-associated,_C-terminal,_and_cheY-homologous_receiver_domain


id: CL:2380
description: HD-GYP domain, and Diguanylate cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2380_HD-GYP_domain,_and_Diguanylate_cyclase_activity


id: CL:2383
description: Diguanylate cyclase activity, and HD-GYP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2383_Diguanylate_cyclase_activity,_and_HD-GYP_domain


id: CL:2413
description: Mixed, incl. Cache domain, and Solute carrier family 13
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2413_Mixed,_incl._Cache_domain,_and_Solute_carrier_family_13


id: CL:2427
description: Sigma-54 interaction domain, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2427_Sigma-54_interaction_domain,_conserved_site


id: CL:2432
description: Sigma-54 interaction domain, ATP-binding site 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2432_Sigma-54_interaction_domain,_ATP-binding_site_1


id: CL:2452
description: Flagellar assembly, and Bacterial-type flagellum organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2452_Flagellar_assembly,_and_Bacterial-type_flagellum_organization


id: CL:2459
description: Bacterial-type flagellum, and Bacterial-type flagellum organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2459_Bacterial-type_flagellum,_and_Bacterial-type_flagellum_organization


id: CL:2461
description: Bacterial-type flagellum, and Bacterial flagellum biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2461_Bacterial-type_flagellum,_and_Bacterial_flagellum_biogenesis


id: CL:2462
description: Bacterial-type flagellum basal body, and Bacterial flagellum biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2462_Bacterial-type_flagellum_basal_body,_and_Bacterial_flagellum_biogenesis


id: CL:2465
description: Bacterial-type flagellum basal body, and Bacterial flagellum biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2465_Bacterial-type_flagellum_basal_body,_and_Bacterial_flagellum_biogenesis


id: CL:2466
description: Bacterial-type flagellum basal body, and Protein secretion by the type III secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2466_Bacterial-type_flagellum_basal_body,_and_Protein_secretion_by_the_type_III_secretion_system


id: CL:2468
description: Bacterial-type flagellum basal body, distal rod, and Flagellar hook-basal body protein, FlgE/F/G
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2468_Bacterial-type_flagellum_basal_body,_distal_rod,_and_Flagellar_hook-basal_body_protein,_FlgE/F/G


id: CL:2482
description: Cytoskeletal motor activity, and Protein secretion by the type III secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2482_Cytoskeletal_motor_activity,_and_Protein_secretion_by_the_type_III_secretion_system


id: CL:2493
description: Bacterial flagellum protein export, and Bacterial-type flagellum assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2493_Bacterial_flagellum_protein_export,_and_Bacterial-type_flagellum_assembly


id: CL:2510
description: Flagellin, and Bacterial-type flagellum hook
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2510_Flagellin,_and_Bacterial-type_flagellum_hook


id: CL:2534
description: Motility protein B-like, N-terminal domain, and Motility protein A-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2534_Motility_protein_B-like,_N-terminal_domain,_and_Motility_protein_A-like


id: CL:2560
description: Protein serine kinase activity, and STAS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2560_Protein_serine_kinase_activity,_and_STAS_domain


id: CL:2576
description: CheY-P phosphatase CheX-like, and Metal-dependent hydrolase HDOD
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2576_CheY-P_phosphatase_CheX-like,_and_Metal-dependent_hydrolase_HDOD


id: CL:258
description: Proton-transporting ATP synthase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:258_Proton-transporting_ATP_synthase_complex


id: CL:2590
description: Mixed, incl. DNA binding HTH domain, Fis-type, and Peptidyl-histidine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2590_Mixed,_incl._DNA_binding_HTH_domain,_Fis-type,_and_Peptidyl-histidine_modification


id: CL:2606
description: Protein serine kinase activity, and SGNH hydrolase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2606_Protein_serine_kinase_activity,_and_SGNH_hydrolase_superfamily


id: CL:2615
description: Mixed, incl. Horizontal gene transfer, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2615_Mixed,_incl._Horizontal_gene_transfer,_and_DNA_integration


id: CL:2616
description: Mixed, incl. Horizontal gene transfer, and Restriction endonuclease type II-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2616_Mixed,_incl._Horizontal_gene_transfer,_and_Restriction_endonuclease_type_II-like


id: CL:2628
description: Mixed, incl. DNA integration, and Cell division coordinator CpoB
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2628_Mixed,_incl._DNA_integration,_and_Cell_division_coordinator_CpoB


id: CL:2646
description: Mixed, incl. Histone-like DNA-binding protein, and Cytolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2646_Mixed,_incl._Histone-like_DNA-binding_protein,_and_Cytolysis


id: CL:2649
description: Mixed, incl. Carbon-nitrogen hydrolase, and Peptide chain release factor
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2649_Mixed,_incl._Carbon-nitrogen_hydrolase,_and_Peptide_chain_release_factor


id: CL:2669
description: Mostly uncharacterized, incl. Tetratricopeptide-like helical domain superfamily, and Spore wall
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2669_Mostly_uncharacterized,_incl._Tetratricopeptide-like_helical_domain_superfamily,_and_Spore_wall


id: CL:2670
description: Mostly uncharacterized, incl. TPR repeat, and Spore wall
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2670_Mostly_uncharacterized,_incl._TPR_repeat,_and_Spore_wall


id: CL:2671
description: Mostly uncharacterized, incl. Lipopolysaccharide transport, and Nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2671_Mostly_uncharacterized,_incl._Lipopolysaccharide_transport,_and_Nucleoid


id: CL:2673
description: Mixed, incl. Lipopolysaccharide transport, and Nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2673_Mixed,_incl._Lipopolysaccharide_transport,_and_Nucleoid


id: CL:2674
description: Mixed, incl. Lipopolysaccharide transport, and Permease LptG/LptF-related
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2674_Mixed,_incl._Lipopolysaccharide_transport,_and_Permease_LptG/LptF-related


id: CL:2675
description: Mixed, incl. Zinc finger/thioredoxin putative, and Nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2675_Mixed,_incl._Zinc_finger/thioredoxin_putative,_and_Nucleoid


id: CL:2677
description: Mixed, incl. Zinc finger/thioredoxin putative, and Polysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2677_Mixed,_incl._Zinc_finger/thioredoxin_putative,_and_Polysaccharide_transport


id: CL:2702
description: Lipopolysaccharide transport, and Permease LptG/LptF-related
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2702_Lipopolysaccharide_transport,_and_Permease_LptG/LptF-related


id: CL:2715
description: Mixed, incl. HD domain, and DDE transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2715_Mixed,_incl._HD_domain,_and_DDE_transposase_sub-family


id: CL:2734
description: Mixed, incl. Spore wall, and TPR repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2734_Mixed,_incl._Spore_wall,_and_TPR_repeat


id: CL:2736
description: Mixed, incl. Spore wall, and TPR repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2736_Mixed,_incl._Spore_wall,_and_TPR_repeat


id: CL:2742
description: Mixed, incl. Tetratricopeptide repeat, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2742_Mixed,_incl._Tetratricopeptide_repeat,_and_Glycosyl_transferases_group_1


id: CL:2782
description: Mixed, incl. Kinase, and Putative zinc- or iron-chelating domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2782_Mixed,_incl._Kinase,_and_Putative_zinc-_or_iron-chelating_domain


id: CL:2784
description: Mostly uncharacterized, incl. Phosphoenolpyruvate synthase, and YcaO-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2784_Mostly_uncharacterized,_incl._Phosphoenolpyruvate_synthase,_and_YcaO-like_domain


id: CL:2785
description: Mixed, incl. YcaO-like domain, and Lysine methyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2785_Mixed,_incl._YcaO-like_domain,_and_Lysine_methyltransferase


id: CL:2787
description: Mixed, incl. YcaO-like domain, and Lysine methyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2787_Mixed,_incl._YcaO-like_domain,_and_Lysine_methyltransferase


id: CL:279
description: Proton-transporting ATP synthase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:279_Proton-transporting_ATP_synthase_complex


id: CL:2804
description: Mixed, incl. Phosphoenolpyruvate synthase, and Single cache domain 3
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2804_Mixed,_incl._Phosphoenolpyruvate_synthase,_and_Single_cache_domain_3


id: CL:2818
description: Mixed, incl. Putative zinc- or iron-chelating domain, and Sulfite exporter TauE/SafE
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2818_Mixed,_incl._Putative_zinc-_or_iron-chelating_domain,_and_Sulfite_exporter_TauE/SafE


id: CL:2819
description: Mixed, incl. Putative zinc- or iron-chelating domain, and Sulfite exporter TauE/SafE
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2819_Mixed,_incl._Putative_zinc-_or_iron-chelating_domain,_and_Sulfite_exporter_TauE/SafE


id: CL:2835
description: Mixed, incl. Sulfate permease family, and Tetracyclin repressor-like, C-terminal domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2835_Mixed,_incl._Sulfate_permease_family,_and_Tetracyclin_repressor-like,_C-terminal_domain_superfamily


id: CL:2858
description: Mixed, incl. Dioxygenase activity, and Transcription regulator complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2858_Mixed,_incl._Dioxygenase_activity,_and_Transcription_regulator_complex


id: CL:2871
description: Mixed, incl. Nickel cation transport, and Polysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2871_Mixed,_incl._Nickel_cation_transport,_and_Polysaccharide_transport


id: CL:2873
description: Mixed, incl. Citrate transporter-like domain, and Type II secretion system protein GspE, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2873_Mixed,_incl._Citrate_transporter-like_domain,_and_Type_II_secretion_system_protein_GspE,_N-terminal


id: CL:2890
description: Carbohydrate metabolic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2890_Carbohydrate_metabolic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:2891
description: Carbohydrate metabolic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2891_Carbohydrate_metabolic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:2892
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2892_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_biosynthetic_process


id: CL:2894
description: O-Antigen nucleotide sugar biosynthesis, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2894_O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_biosynthetic_process


id: CL:2895
description: O-Antigen nucleotide sugar biosynthesis, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2895_O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_biosynthetic_process


id: CL:2896
description: O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferase, family 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2896_O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyl_transferase,_family_1


id: CL:2897
description: O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferase, family 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2897_O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyl_transferase,_family_1


id: CL:2898
description: O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferase, family 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2898_O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyl_transferase,_family_1


id: CL:2899
description: O-Antigen nucleotide sugar biosynthesis, and Alpha-D-phosphohexomutase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2899_O-Antigen_nucleotide_sugar_biosynthesis,_and_Alpha-D-phosphohexomutase_superfamily


id: CL:2900
description: O-Antigen nucleotide sugar biosynthesis, and Alpha-D-phosphohexomutase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2900_O-Antigen_nucleotide_sugar_biosynthesis,_and_Alpha-D-phosphohexomutase_superfamily


id: CL:2902
description: Nucleotide-sugar metabolic process, and Nucleotidyl transferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2902_Nucleotide-sugar_metabolic_process,_and_Nucleotidyl_transferase_domain


id: CL:2903
description: Polyketide sugar unit biosynthesis, and Pentose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2903_Polyketide_sugar_unit_biosynthesis,_and_Pentose_metabolic_process


id: CL:2905
description: Polyketide sugar unit biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2905_Polyketide_sugar_unit_biosynthesis


id: CL:2922
description: Nucleotidyl transferase, and Alpha-D-phosphohexomutase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2922_Nucleotidyl_transferase,_and_Alpha-D-phosphohexomutase_superfamily


id: CL:293
description: Protein targeting, and Translocation
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:293_Protein_targeting,_and_Translocation


id: CL:2938
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2938_Mixed,_incl._UDP-N-acetyl-D-mannosamine/glucosamine_dehydrogenase,_and_UDP-N-acetylglucosamine_2-epimerase

description:
  Mixed, incl. UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase, and UDP-N-acetylglucosamine 2-epimerase


id: CL:2940
description: UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase, and Chain length determinant protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2940_UDP-N-acetyl-D-mannosamine/glucosamine_dehydrogenase,_and_Chain_length_determinant_protein


id: CL:2960
description: WxcM-like, C-terminal , and DegT/DnrJ/EryC1/StrS aminotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2960_WxcM-like,_C-terminal_,_and_DegT/DnrJ/EryC1/StrS_aminotransferase


id: CL:2961
description: WxcM-like, C-terminal , and DegT/DnrJ/EryC1/StrS aminotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2961_WxcM-like,_C-terminal_,_and_DegT/DnrJ/EryC1/StrS_aminotransferase


id: CL:2970
description: WxcM-like, C-terminal , and DegT/DnrJ/EryC1/StrS aminotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2970_WxcM-like,_C-terminal_,_and_DegT/DnrJ/EryC1/StrS_aminotransferase


id: CL:2986
description: Mannoside phosphorylase, and Mannose-6-phosphate isomerase, type II, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2986_Mannoside_phosphorylase,_and_Mannose-6-phosphate_isomerase,_type_II,_C-terminal


id: CL:2995
description: Starch and sucrose metabolism, and Glycosyltransferase Family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:2995_Starch_and_sucrose_metabolism,_and_Glycosyltransferase_Family_4


id: CL:3000
description: Glycogen biosynthesis, and Starch and sucrose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3000_Glycogen_biosynthesis,_and_Starch_and_sucrose_metabolism


id: CL:3015
description: Glycosyltransferase subfamily 4-like, N-terminal domain, and O-Antigen ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3015_Glycosyltransferase_subfamily_4-like,_N-terminal_domain,_and_O-Antigen_ligase


id: CL:3029
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3029_Mixed,_incl._Hexapeptide_transferase,_conserved_site,_and_Polysaccharide_biosynthesis_C-terminal_domain

description:
  Mixed, incl. Hexapeptide transferase, conserved site, and Polysaccharide biosynthesis C-terminal domain


id: CL:3044
description: Mixed, incl. Protein tyrosine kinase activity, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3044_Mixed,_incl._Protein_tyrosine_kinase_activity,_and_AAA_domain


id: CL:3058
description: Mixed, incl. Glycosylation, and Glycosyltransferase 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3058_Mixed,_incl._Glycosylation,_and_Glycosyltransferase_2-like


id: CL:3062
description: Glycosyltransferase like family 2, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3062_Glycosyltransferase_like_family_2,_and_Glycosyl_transferase_family_2


id: CL:3077
description: Mixed, incl. Lipid modification, and Endomembrane system
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3077_Mixed,_incl._Lipid_modification,_and_Endomembrane_system


id: CL:3098
description: Mixed, incl. Polysaccharide biosynthesis protein, and glycerol-3-phosphate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3098_Mixed,_incl._Polysaccharide_biosynthesis_protein,_and_glycerol-3-phosphate_catabolic_process


id: CL:3112
description: Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3112_Lipopolysaccharide_biosynthesis


id: CL:3113
description: Glycolipid metabolic process, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3113_Glycolipid_metabolic_process,_and_Lipopolysaccharide_biosynthesis


id: CL:3116
description: Lipid A biosynthesis, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3116_Lipid_A_biosynthesis,_and_Lipopolysaccharide_biosynthesis


id: CL:3140
description: Mixed, incl. HAD-hyrolase-like, and Carbohydrate kinase PfkB
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3140_Mixed,_incl._HAD-hyrolase-like,_and_Carbohydrate_kinase_PfkB


id: CL:315
description: Mixed, incl. Maturation of SSU-rRNA, and tRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:315_Mixed,_incl._Maturation_of_SSU-rRNA,_and_tRNA_pseudouridine_synthesis


id: CL:3160
description: Mixed, incl. Transposition, and Acyl-CoA N-acyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3160_Mixed,_incl._Transposition,_and_Acyl-CoA_N-acyltransferase


id: CL:3162
description: Mixed, incl. DDE transposase sub-family, and Nucleotidyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3162_Mixed,_incl._DDE_transposase_sub-family,_and_Nucleotidyl_transferase


id: CL:3164
description: Mixed, incl. Nucleotidyl transferase, and PEP-utilising enzyme, mobile domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3164_Mixed,_incl._Nucleotidyl_transferase,_and_PEP-utilising_enzyme,_mobile_domain


id: CL:3186
description: Mixed, incl. Acyl-CoA N-acyltransferase, and Monooxygenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3186_Mixed,_incl._Acyl-CoA_N-acyltransferase,_and_Monooxygenase_activity


id: CL:3197
description: Mixed, incl. Ubiquinone and other terpenoid-quinone biosynthesis, and Biotin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3197_Mixed,_incl._Ubiquinone_and_other_terpenoid-quinone_biosynthesis,_and_Biotin_metabolic_process


id: CL:3198
description: Mixed, incl. Menaquinone biosynthesis, and Ubiquinone and other terpenoid-quinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3198_Mixed,_incl._Menaquinone_biosynthesis,_and_Ubiquinone_and_other_terpenoid-quinone_biosynthesis


id: CL:3199
description: Mixed, incl. Menaquinone biosynthesis, and Ubiquinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3199_Mixed,_incl._Menaquinone_biosynthesis,_and_Ubiquinone_metabolic_process


id: CL:3201
description: Menaquinone biosynthesis, and Ubiquinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3201_Menaquinone_biosynthesis,_and_Ubiquinone_metabolic_process


id: CL:3222
description: Ubiquinone biosynthesis complex, and Polyprenyl synthetase
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3222_Ubiquinone_biosynthesis_complex,_and_Polyprenyl_synthetase


id: CL:3234
description: Mixed, incl. Amidohydrolase 3, and ATP-dependent Clp protease proteolytic subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3234_Mixed,_incl._Amidohydrolase_3,_and_ATP-dependent_Clp_protease_proteolytic_subunit


id: CL:3243
description: Mixed, incl. Biotin metabolic process, and Peptidase M20
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3243_Mixed,_incl._Biotin_metabolic_process,_and_Peptidase_M20


id: CL:3268
description: Mixed, incl. beta-Lactam resistance, and Protein localization
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3268_Mixed,_incl._beta-Lactam_resistance,_and_Protein_localization


id: CL:3269
description: Mixed, incl. beta-Lactam resistance, and Protein localization
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3269_Mixed,_incl._beta-Lactam_resistance,_and_Protein_localization


id: CL:3270
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3270_Mixed,_incl._Efflux_transmembrane_transporter_activity,_and_RND_efflux_pump,_membrane_fusion_protein

description:
  Mixed, incl. Efflux transmembrane transporter activity, and RND efflux pump, membrane fusion protein


id: CL:3272
description: Efflux transmembrane transporter activity, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3272_Efflux_transmembrane_transporter_activity,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:3274
description: Efflux transmembrane transporter activity, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3274_Efflux_transmembrane_transporter_activity,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:3276
description: Outer membrane efflux protein, and Hydrophobe/amphiphile efflux-1 HAE1
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3276_Outer_membrane_efflux_protein,_and_Hydrophobe/amphiphile_efflux-1_HAE1


id: CL:330
description: RNA helicase activity, and S1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:330_RNA_helicase_activity,_and_S1_domain


id: CL:3312
description: Mixed, incl. Lipoprotein localization, and Protein insertion into membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3312_Mixed,_incl._Lipoprotein_localization,_and_Protein_insertion_into_membrane


id: CL:3314
description: Protein insertion into membrane, and Lipoprotein localization
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3314_Protein_insertion_into_membrane,_and_Lipoprotein_localization


id: CL:3333
description: Mixed, incl. TonB/TolA, C-terminal, and Biopolymer transport protein ExbD/TolR
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3333_Mixed,_incl._TonB/TolA,_C-terminal,_and_Biopolymer_transport_protein_ExbD/TolR


id: CL:3350
description: Mixed, incl. Tetratricopeptide repeat, and Lipoprotein metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3350_Mixed,_incl._Tetratricopeptide_repeat,_and_Lipoprotein_metabolic_process


id: CL:3362
description: Mostly uncharacterized, incl. TonB box, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3362_Mostly_uncharacterized,_incl._TonB_box,_and_Periplasmic_binding_protein


id: CL:3363
description: Mixed, incl. Periplasmic binding protein, and ABC transporter, permease protein, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3363_Mixed,_incl._Periplasmic_binding_protein,_and_ABC_transporter,_permease_protein,_BtuC-like


id: CL:3364
description: Mixed, incl. Protein of unknown function (DUF3450), and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3364_Mixed,_incl._Protein_of_unknown_function_(DUF3450),_and_Protein_transport


id: CL:3367
description: Mixed, incl. Periplasmic binding protein, and ABC transporter, permease protein, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3367_Mixed,_incl._Periplasmic_binding_protein,_and_ABC_transporter,_permease_protein,_BtuC-like


id: CL:3381
description: Protein of unknown function (DUF3450), and TonB/TolA, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3381_Protein_of_unknown_function_(DUF3450),_and_TonB/TolA,_C-terminal


id: CL:3392
description: FecCD transport family, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3392_FecCD_transport_family,_and_Periplasmic_binding_protein


id: CL:3407
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3407_Mixed,_incl._H-type_lectin_domain_superfamily,_and_Siderophore_uptake_transmembrane_transporter_activity

description:
  Mixed, incl. H-type lectin domain superfamily, and Siderophore uptake transmembrane transporter activity


id: CL:3408
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3408_Mixed,_incl._H-type_lectin_domain_superfamily,_and_Siderophore_uptake_transmembrane_transporter_activity

description:
  Mixed, incl. H-type lectin domain superfamily, and Siderophore uptake transmembrane transporter activity


id: CL:3409
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3409_Mixed,_incl._H-type_lectin_domain_superfamily,_and_Siderophore_uptake_transmembrane_transporter_activity

description:
  Mixed, incl. H-type lectin domain superfamily, and Siderophore uptake transmembrane transporter activity


id: CL:3422
description: Mixed, incl. AAA domain, and Calcineurin-like phosphoesterase superfamily domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3422_Mixed,_incl._AAA_domain,_and_Calcineurin-like_phosphoesterase_superfamily_domain


id: CL:3431
description: Hydrolase activity, hydrolyzing O-glycosyl compounds, and SGNH hydrolase-type esterase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3431_Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds,_and_SGNH_hydrolase-type_esterase_domain


id: CL:3448
description: Mixed, incl. Inorganic phosphate transmembrane transporter activity, and Phosphate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3448_Mixed,_incl._Inorganic_phosphate_transmembrane_transporter_activity,_and_Phosphate_ion_transport


id: CL:3450
description: Inorganic phosphate transmembrane transporter activity, and Phosphate ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3450_Inorganic_phosphate_transmembrane_transporter_activity,_and_Phosphate_ion_binding


id: CL:3452
description: Phosphate transport, and Phosphate ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3452_Phosphate_transport,_and_Phosphate_ion_binding


id: CL:3478
description: Mixed, incl. PhoU-like domain superfamily, and Phosphate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3478_Mixed,_incl._PhoU-like_domain_superfamily,_and_Phosphate_transport


id: CL:3489
description: Mixed, incl. Radical SAM, alpha/beta horseshoe, and Cold shock, CspA
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3489_Mixed,_incl._Radical_SAM,_alpha/beta_horseshoe,_and_Cold_shock,_CspA


id: CL:3491
description: Mixed, incl. Methylthiotransferase, and Exoribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3491_Mixed,_incl._Methylthiotransferase,_and_Exoribonuclease_activity


id: CL:3503
description: Mixed, incl. Cold shock, CspA, and Creatinase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3503_Mixed,_incl._Cold_shock,_CspA,_and_Creatinase,_N-terminal


id: CL:3519
description: Mixed, incl. Tetrapyrrole metabolic process, and Cytochrome complex assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3519_Mixed,_incl._Tetrapyrrole_metabolic_process,_and_Cytochrome_complex_assembly


id: CL:3520
description: Mixed, incl. Tetrapyrrole metabolic process, and 4Fe4S-binding SPASM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3520_Mixed,_incl._Tetrapyrrole_metabolic_process,_and_4Fe4S-binding_SPASM_domain


id: CL:3522
description: Mixed, incl. Tetrapyrrole metabolic process, and 4Fe4S-binding SPASM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3522_Mixed,_incl._Tetrapyrrole_metabolic_process,_and_4Fe4S-binding_SPASM_domain


id: CL:3524
description: Heme biosynthetic process, and 4Fe4S-binding SPASM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3524_Heme_biosynthetic_process,_and_4Fe4S-binding_SPASM_domain


id: CL:3552
description: Mixed, incl. Cobalt ion transport, and Enzyme inhibitor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3552_Mixed,_incl._Cobalt_ion_transport,_and_Enzyme_inhibitor_activity


id: CL:3566
description: Mixed, incl. Sodium Bile acid symporter family, and DNA glycosylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3566_Mixed,_incl._Sodium_Bile_acid_symporter_family,_and_DNA_glycosylase


id: CL:3576
description: Mixed, incl. Cytochrome complex assembly, and Sodium ion transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3576_Mixed,_incl._Cytochrome_complex_assembly,_and_Sodium_ion_transmembrane_transport


id: CL:3577
description: Mixed, incl. Cytochrome complex assembly, and Cytolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3577_Mixed,_incl._Cytochrome_complex_assembly,_and_Cytolysis


id: CL:3580
description: Heme transport, and Sodium ion transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3580_Heme_transport,_and_Sodium_ion_transmembrane_transport


id: CL:3599
description: Mixed, incl. LOG family, and Amino acid salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3599_Mixed,_incl._LOG_family,_and_Amino_acid_salvage


id: CL:3618
description: Mostly uncharacterized, incl. Disease, and Winged helix DNA-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3618_Mostly_uncharacterized,_incl._Disease,_and_Winged_helix_DNA-binding_domain_superfamily


id: CL:3619
description: Mostly uncharacterized, incl. Nitroreductase, and DNA-binding transcription factor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3619_Mostly_uncharacterized,_incl._Nitroreductase,_and_DNA-binding_transcription_factor_activity


id: CL:362
description: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:362_Aminoacyl-tRNA_synthetase,_class_Ia,_anticodon-binding


id: CL:3620
description: Mixed, incl. DNA-binding transcription factor activity, and Sulfuric ester hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3620_Mixed,_incl._DNA-binding_transcription_factor_activity,_and_Sulfuric_ester_hydrolase_activity


id: CL:3622
description: Mixed, incl. Sulfuric ester hydrolase activity, and ANL, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3622_Mixed,_incl._Sulfuric_ester_hydrolase_activity,_and_ANL,_N-terminal_domain


id: CL:3623
description: Mixed, incl. Sulfuric ester hydrolase activity, and Protein dephosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3623_Mixed,_incl._Sulfuric_ester_hydrolase_activity,_and_Protein_dephosphorylation


id: CL:3637
description: Mixed, incl. Toxin-antitoxin complex, and Serine/threonine-protein kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3637_Mixed,_incl._Toxin-antitoxin_complex,_and_Serine/threonine-protein_kinase


id: CL:3657
description: Sulfite exporter TauE/SafE, and Rhodanese Homology Domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3657_Sulfite_exporter_TauE/SafE,_and_Rhodanese_Homology_Domain


id: CL:3669
description: Mixed, incl. Nitroreductase, and Monooxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3669_Mixed,_incl._Nitroreductase,_and_Monooxygenase


id: CL:3671
description: Mixed, incl. Nitroreductase, and YcaO-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3671_Mixed,_incl._Nitroreductase,_and_YcaO-like_domain


id: CL:3673
description: Nitroreductase, and YcaO-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3673_Nitroreductase,_and_YcaO-like_domain


id: CL:3699
description: Mixed, incl. Monooxygenase, and Carbon-sulfur lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3699_Mixed,_incl._Monooxygenase,_and_Carbon-sulfur_lyase_activity


id: CL:3700
description: Mixed, incl. uroporphyrin-III C-methyltransferase activity, and Sulphur relay, DsrE/F-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3700_Mixed,_incl._uroporphyrin-III_C-methyltransferase_activity,_and_Sulphur_relay,_DsrE/F-like


id: CL:3709
description: Monooxygenase, and Carbon-sulfur lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3709_Monooxygenase,_and_Carbon-sulfur_lyase_activity


id: CL:3718
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3718_Mostly_uncharacterized,_incl._Respiratory_electron_transport_chain,_and_Cellular_iron_ion_homeostasis

description:
  Mostly uncharacterized, incl. Respiratory electron transport chain, and Cellular iron ion homeostasis


id: CL:3719
description: Mixed, incl. Aerobic electron transport chain, and Cellular iron ion homeostasis
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3719_Mixed,_incl._Aerobic_electron_transport_chain,_and_Cellular_iron_ion_homeostasis


id: CL:3721
description: Mixed, incl. Aerobic electron transport chain, and Crp-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3721_Mixed,_incl._Aerobic_electron_transport_chain,_and_Crp-type_HTH_domain


id: CL:3723
description: Aerobic electron transport chain, and DsrE/DsrF-like family
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3723_Aerobic_electron_transport_chain,_and_DsrE/DsrF-like_family


id: CL:3745
description: Mixed, incl. Multiheme cytochrome superfamily, and Iron storage
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3745_Mixed,_incl._Multiheme_cytochrome_superfamily,_and_Iron_storage


id: CL:3747
description: Mixed, incl. Sulfate permease family, and ubiE/COQ5 methyltransferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3747_Mixed,_incl._Sulfate_permease_family,_and_ubiE/COQ5_methyltransferase_family


id: CL:3764
description: Mostly uncharacterized, incl. AsmA, and Photosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3764_Mostly_uncharacterized,_incl._AsmA,_and_Photosynthesis


id: CL:3766
description: Mixed, incl. Photosynthesis, and Response to radiation
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3766_Mixed,_incl._Photosynthesis,_and_Response_to_radiation


id: CL:3780
description: Mixed, incl. AsmA, and Methyltransferase, class B
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3780_Mixed,_incl._AsmA,_and_Methyltransferase,_class_B


id: CL:379
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:379_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity,_and_tRNA_synthetases_class_II_(D,_K_and_N)

description:
  glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, and tRNA synthetases class II (D, K and N)


id: CL:3793
description: Mostly uncharacterized, incl. Dinitrogenase iron-molybdenum cofactor, and AhpD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3793_Mostly_uncharacterized,_incl._Dinitrogenase_iron-molybdenum_cofactor,_and_AhpD-like


id: CL:3794
description: Mostly uncharacterized, incl. AhpD-like, and NTF2-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3794_Mostly_uncharacterized,_incl._AhpD-like,_and_NTF2-like_domain_superfamily


id: CL:3795
description: Mixed, incl. NTF2-like domain superfamily, and Aminotransferase, class I/classII
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3795_Mixed,_incl._NTF2-like_domain_superfamily,_and_Aminotransferase,_class_I/classII


id: CL:3796
description: Mixed, incl. NTF2-like domain superfamily, and Regulation of protein targeting
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3796_Mixed,_incl._NTF2-like_domain_superfamily,_and_Regulation_of_protein_targeting


id: CL:3811
description: Mixed, incl. Aminotransferase, class I/classII, and Neutral amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3811_Mixed,_incl._Aminotransferase,_class_I/classII,_and_Neutral_amino_acid_transport


id: CL:3826
description: Mixed, incl. AhpD-like, and Maf-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3826_Mixed,_incl._AhpD-like,_and_Maf-like_protein


id: CL:3839
description: Mixed, incl. Dinitrogenase iron-molybdenum cofactor, and Site of DNA damage
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3839_Mixed,_incl._Dinitrogenase_iron-molybdenum_cofactor,_and_Site_of_DNA_damage


id: CL:3841
description: Dinitrogenase iron-molybdenum cofactor, and CobQ/CobB/MinD/ParA nucleotide binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3841_Dinitrogenase_iron-molybdenum_cofactor,_and_CobQ/CobB/MinD/ParA_nucleotide_binding_domain


id: CL:3844
description: MTH1175 domain, and CobQ/CobB/MinD/ParA nucleotide binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3844_MTH1175_domain,_and_CobQ/CobB/MinD/ParA_nucleotide_binding_domain


id: CL:3866
description: Site of DNA damage, and Nitrogen regulatory PII-like, alpha/beta
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3866_Site_of_DNA_damage,_and_Nitrogen_regulatory_PII-like,_alpha/beta


id: CL:3876
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3876_Mixed,_incl._Transglycosylase_SLT_domain,_and_Peptidyl-prolyl_cis-trans_isomerase,_PpiC-type,_conserved_site

description:
  Mixed, incl. Transglycosylase SLT domain, and Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site


id: CL:3877
description: Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site, and Autotransporter beta-domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3877_Peptidyl-prolyl_cis-trans_isomerase,_PpiC-type,_conserved_site,_and_Autotransporter_beta-domain


id: CL:388
description: glycyl-tRNA aminoacylation, and Leucyl-tRNA synthetase, Domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:388_glycyl-tRNA_aminoacylation,_and_Leucyl-tRNA_synthetase,_Domain_2


id: CL:3886
description: Transglycosylase SLT domain, and Ribbon-helix-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3886_Transglycosylase_SLT_domain,_and_Ribbon-helix-helix


id: CL:3897
description: Mixed, incl. Xenobiotic metabolic process, and Lipid degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3897_Mixed,_incl._Xenobiotic_metabolic_process,_and_Lipid_degradation


id: CL:3927
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3927_Mixed,_incl._DNA_recombination_and_repair_protein_RecA-like,_ATP-binding_domain,_and_Methyltransferase,_class_B

description:
  Mixed, incl. DNA recombination and repair protein RecA-like, ATP-binding domain, and Methyltransferase, class B


id: CL:3941
description: Mixed, incl. L-lysine transport, and NusB family
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3941_Mixed,_incl._L-lysine_transport,_and_NusB_family


id: CL:3944
description: Mixed, incl. L-lysine transport, and NusB family
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3944_Mixed,_incl._L-lysine_transport,_and_NusB_family


id: CL:3967
description: Mixed, incl. UmuC domain, and Aminopeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3967_Mixed,_incl._UmuC_domain,_and_Aminopeptidase


id: CL:3978
description: Mixed, incl. ABC transporter, substrate-binding protein, and Major Facilitator Superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3978_Mixed,_incl._ABC_transporter,_substrate-binding_protein,_and_Major_Facilitator_Superfamily


id: CL:3979
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3979_Mixed,_incl._TRAP_transporter_solute_receptor_DctP,_and_TRAP_transporter_large_membrane_protein_DctM

description:
  Mixed, incl. TRAP transporter solute receptor DctP, and TRAP transporter large membrane protein DctM


id: CL:3980
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3980_Mixed,_incl._TRAP_transporter_solute_receptor_DctP,_and_TRAP_transporter_large_membrane_protein_DctM

description:
  Mixed, incl. TRAP transporter solute receptor DctP, and TRAP transporter large membrane protein DctM


id: CL:3981
description: TRAP transporter solute receptor DctP, and TRAP transporter large membrane protein DctM
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3981_TRAP_transporter_solute_receptor_DctP,_and_TRAP_transporter_large_membrane_protein_DctM


id: CL:3983
description: TRAP transporter solute receptor, DctP family, and TRAP transporter large membrane protein DctM
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3983_TRAP_transporter_solute_receptor,_DctP_family,_and_TRAP_transporter_large_membrane_protein_DctM


id: CL:3997
description: Bacterial microcompartment, and C4-dicarboxylate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:3997_Bacterial_microcompartment,_and_C4-dicarboxylate_transport


id: CL:4006
description: Mixed, incl. YqgF/RNase H-like domain, and Aminoacyl-tRNA editing domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4006_Mixed,_incl._YqgF/RNase_H-like_domain,_and_Aminoacyl-tRNA_editing_domain


id: CL:4018
description: Amidohydrolase, and Sulfite exporter TauE/SafE
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4018_Amidohydrolase,_and_Sulfite_exporter_TauE/SafE


id: CL:402
description: DNA-directed RNA polymerase, and SNF2, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:402_DNA-directed_RNA_polymerase,_and_SNF2,_N-terminal


id: CL:4033
description: Mixed, incl. ABC transporter, substrate-binding protein, and Major Facilitator Superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4033_Mixed,_incl._ABC_transporter,_substrate-binding_protein,_and_Major_Facilitator_Superfamily


id: CL:4034
description: Mixed, incl. Major Facilitator Superfamily, and Protein of unknown function DUF697
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4034_Mixed,_incl._Major_Facilitator_Superfamily,_and_Protein_of_unknown_function_DUF697


id: CL:4036
description: ABC transporter, substrate-binding protein, and Major Facilitator Superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4036_ABC_transporter,_substrate-binding_protein,_and_Major_Facilitator_Superfamily


id: CL:405
description: RNA polymerase, and SNF2, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:405_RNA_polymerase,_and_SNF2,_N-terminal


id: CL:4052
description: Mixed, incl. Type 1 protein exporter, and Protein of unknown function DUF697
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4052_Mixed,_incl._Type_1_protein_exporter,_and_Protein_of_unknown_function_DUF697


id: CL:4064
description: ABC transporter, substrate-binding protein, and MatE
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4064_ABC_transporter,_substrate-binding_protein,_and_MatE


id: CL:4085
description: Mixed, incl. Metal ion transport, and Predicted permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4085_Mixed,_incl._Metal_ion_transport,_and_Predicted_permease


id: CL:4086
description: Mixed, incl. Metal ion transport, and Heavy-metal-associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4086_Mixed,_incl._Metal_ion_transport,_and_Heavy-metal-associated_domain


id: CL:4088
description: Mixed, incl. Heavy-metal-associated domain, and Metal ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4088_Mixed,_incl._Heavy-metal-associated_domain,_and_Metal_ion_transport


id: CL:4091
description: Mixed, incl. Heavy-metal-associated domain, and FecCD transport family
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4091_Mixed,_incl._Heavy-metal-associated_domain,_and_FecCD_transport_family


id: CL:4127
description: Mixed, incl. Predicted permease, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4127_Mixed,_incl._Predicted_permease,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:4128
description: Mixed, incl. Integrase, catalytic core, and Predicted permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4128_Mixed,_incl._Integrase,_catalytic_core,_and_Predicted_permease


id: CL:4139
description: Predicted permease, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4139_Predicted_permease,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:4150
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4150_Mixed,_incl._Regulation_of_carbohydrate_metabolic_process,_and_Radical_SAM_domain-containing_protein,_N-terminal

description:
  Mixed, incl. Regulation of carbohydrate metabolic process, and Radical SAM domain-containing protein, N-terminal


id: CL:4171
description: Mostly uncharacterized, incl. Domain of unknown function DUF362, and DDE transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4171_Mostly_uncharacterized,_incl._Domain_of_unknown_function_DUF362,_and_DDE_transposase_sub-family


id: CL:4173
description: Mixed, incl. Domain of unknown function DUF362, and ACT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4173_Mixed,_incl._Domain_of_unknown_function_DUF362,_and_ACT_domain


id: CL:4196
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4196_Mixed,_incl._Alkyl_hydroperoxide_reductase_subunit_C/_Thiol_specific_antioxidant,_and_Nucleotide-excision_repair

description:
  Mixed, incl. Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant, and Nucleotide-excision repair


id: CL:4213
description: Mixed, incl. Bacterial secretion system, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4213_Mixed,_incl._Bacterial_secretion_system,_and_Pilus_organization


id: CL:4214
description: Mixed, incl. Bacterial secretion system, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4214_Mixed,_incl._Bacterial_secretion_system,_and_Pilus_organization


id: CL:4215
description: Mixed, incl. Bacterial secretion system, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4215_Mixed,_incl._Bacterial_secretion_system,_and_Pilus_organization


id: CL:4216
description: Bacterial secretion system, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4216_Bacterial_secretion_system,_and_Pilus_organization


id: CL:4218
description: Bacterial secretion system, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4218_Bacterial_secretion_system,_and_Pilus_organization


id: CL:4220
description: Bacterial secretion system, and Modulation by symbiont of host process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4220_Bacterial_secretion_system,_and_Modulation_by_symbiont_of_host_process


id: CL:4222
description: Mixed, incl. Type II secretion system protein GspE, N-terminal, and Pilus assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4222_Mixed,_incl._Type_II_secretion_system_protein_GspE,_N-terminal,_and_Pilus_assembly


id: CL:4223
description: Mixed, incl. Pilus assembly, and Type IV pilus secretin PilQ
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4223_Mixed,_incl._Pilus_assembly,_and_Type_IV_pilus_secretin_PilQ


id: CL:4225
description: Pilus assembly, and Cell division protein FtsA
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4225_Pilus_assembly,_and_Cell_division_protein_FtsA


id: CL:4243
description: Type II secretion system protein GspE, N-terminal, and Aspartic-type peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4243_Type_II_secretion_system_protein_GspE,_N-terminal,_and_Aspartic-type_peptidase_activity


id: CL:4254
description: Mixed, incl. Type II protein secretion system complex, and Prokaryotic N-terminal methylation site
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4254_Mixed,_incl._Type_II_protein_secretion_system_complex,_and_Prokaryotic_N-terminal_methylation_site


id: CL:4256
description: Prokaryotic N-terminal methylation site, and Secretion by cell
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4256_Prokaryotic_N-terminal_methylation_site,_and_Secretion_by_cell


id: CL:4266
description: Mixed, incl. Type II protein secretion system complex, and Fimbrial assembly protein (PilN)
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4266_Mixed,_incl._Type_II_protein_secretion_system_complex,_and_Fimbrial_assembly_protein_(PilN)


id: CL:4283
description: Protein transport across the cell outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4283_Protein_transport_across_the_cell_outer_membrane


id: CL:4300
description: Pilus assembly, and Calcium ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4300_Pilus_assembly,_and_Calcium_ion_binding


id: CL:4314
description: Mixed, incl. Pilus retraction protein PilT/PilU, and Reproduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4314_Mixed,_incl._Pilus_retraction_protein_PilT/PilU,_and_Reproduction


id: CL:4333
description: Mixed, incl. Transglutaminase-like, and Probable RNA and SrmB- binding site of polymerase A
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4333_Mixed,_incl._Transglutaminase-like,_and_Probable_RNA_and_SrmB-_binding_site_of_polymerase_A


id: CL:4345
description: Mixed, incl. FAD dependent protein, and Lysin motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4345_Mixed,_incl._FAD_dependent_protein,_and_Lysin_motif


id: CL:4346
description: Mixed, incl. Creatinase, N-terminal, and Cyclic nucleotide-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4346_Mixed,_incl._Creatinase,_N-terminal,_and_Cyclic_nucleotide-binding_domain_superfamily


id: CL:435
description: Mixed, incl. Pseudouridine synthesis, and Alpha/beta knot methyltransferases
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:435_Mixed,_incl._Pseudouridine_synthesis,_and_Alpha/beta_knot_methyltransferases


id: CL:4357
description: FAD dependent protein, and Lysin motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4357_FAD_dependent_protein,_and_Lysin_motif


id: CL:4368
description: Mixed, incl. TrkA-C domain, and LSM domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4368_Mixed,_incl._TrkA-C_domain,_and_LSM_domain_superfamily


id: CL:4369
description: Mixed, incl. TrkA-C domain, and Potassium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4369_Mixed,_incl._TrkA-C_domain,_and_Potassium_ion_transport


id: CL:4371
description: Mixed, incl. Potassium ion transport, and Sugar (and other) transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4371_Mixed,_incl._Potassium_ion_transport,_and_Sugar_(and_other)_transporter


id: CL:4372
description: Potassium ion transport, and Sodium/solute symporter superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4372_Potassium_ion_transport,_and_Sodium/solute_symporter_superfamily


id: CL:4374
description: Potassium transport, and Sodium/solute symporter superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4374_Potassium_transport,_and_Sodium/solute_symporter_superfamily


id: CL:438
description: Mixed, incl. Septation, and Class III cytochrome C
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:438_Mixed,_incl._Septation,_and_Class_III_cytochrome_C


id: CL:4393
description: Mixed, incl. Cation/H+ exchanger, and Sugar (and other) transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4393_Mixed,_incl._Cation/H+_exchanger,_and_Sugar_(and_other)_transporter


id: CL:4409
description: Mostly uncharacterized, incl. TSP type-3 repeat, and Putative regulatory protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4409_Mostly_uncharacterized,_incl._TSP_type-3_repeat,_and_Putative_regulatory_protein


id: CL:4410
description: Mixed, incl. TSP type-3 repeat, and Putative regulatory protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4410_Mixed,_incl._TSP_type-3_repeat,_and_Putative_regulatory_protein


id: CL:4421
description: Mixed, incl. RNA adenylyltransferase activity, and Citrate transporter-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4421_Mixed,_incl._RNA_adenylyltransferase_activity,_and_Citrate_transporter-like_domain


id: CL:4432
description: Mixed, incl. LSM domain superfamily, and Sodium
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4432_Mixed,_incl._LSM_domain_superfamily,_and_Sodium


id: CL:4434
description: LSM domain superfamily, and Sodium
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4434_LSM_domain_superfamily,_and_Sodium


id: CL:4458
description: Mixed, incl. tRNA-dihydrouridine synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4458_Mixed,_incl._tRNA-dihydrouridine_synthase


id: CL:4468
description: Integrase-like, catalytic domain superfamily, and Helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4468_Integrase-like,_catalytic_domain_superfamily,_and_Helix-turn-helix_domain


id: CL:4469
description: Mixed, incl. Integrase-like, catalytic domain superfamily, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4469_Mixed,_incl._Integrase-like,_catalytic_domain_superfamily,_and_AAA_domain


id: CL:4481
description: Integrase, catalytic domain, and Helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4481_Integrase,_catalytic_domain,_and_Helix-turn-helix_domain


id: CL:4494
description: ABC transporters, and Quorum sensing
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4494_ABC_transporters,_and_Quorum_sensing


id: CL:4496
description: ABC transporters, and Quorum sensing
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4496_ABC_transporters,_and_Quorum_sensing


id: CL:4498
description: ABC transporters, and Quorum sensing
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4498_ABC_transporters,_and_Quorum_sensing


id: CL:4499
description: ABC transporters, and Oligopeptide/dipeptide ABC transporter, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4499_ABC_transporters,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal


id: CL:4500
description: Mixed, incl. ATP-binding cassette (ABC) transporter complex, and Ligand-gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4500_Mixed,_incl._ATP-binding_cassette_(ABC)_transporter_complex,_and_Ligand-gated_channel_activity


id: CL:4501
description: Mixed, incl. ATP-binding cassette (ABC) transporter complex, and Ligand-gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4501_Mixed,_incl._ATP-binding_cassette_(ABC)_transporter_complex,_and_Ligand-gated_channel_activity


id: CL:4503
description: Amino acid ABC transporter, permease protein, 3-TM domain, and Ligand-gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4503_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_Ligand-gated_channel_activity


id: CL:4505
description: Amino acid ABC transporter, permease protein, 3-TM domain, and Ligand-gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4505_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_Ligand-gated_channel_activity


id: CL:4507
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4507_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_ABC-type_amino_acid_transport_system,_ATPase_component,_HisP-type

description:
  Amino acid ABC transporter, permease protein, 3-TM domain, and ABC-type amino acid transport system, ATPase component, HisP-type


id: CL:4508
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4508_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_Ionotropic_glutamate_receptor,_C-terminal

description:
  Amino acid ABC transporter, permease protein, 3-TM domain, and Ionotropic glutamate receptor, C-terminal


id: CL:451
description: rRNA pseudouridine synthesis, and Regulation of cellular component biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:451_rRNA_pseudouridine_synthesis,_and_Regulation_of_cellular_component_biogenesis


id: CL:4521
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4521_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_ABC-type_amino_acid_transport_system,_ATPase_component,_HisP-type

description:
  Amino acid ABC transporter, permease protein, 3-TM domain, and ABC-type amino acid transport system, ATPase component, HisP-type


id: CL:4539
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4539_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_Ionotropic_glutamate_receptor,_C-terminal

description:
  Amino acid ABC transporter, permease protein, 3-TM domain, and Ionotropic glutamate receptor, C-terminal


id: CL:4562
description: Phospholipid transport, and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4562_Phospholipid_transport,_and_ABC-2_transporter


id: CL:4585
description: ABC-2 transporter, and HlyD family secretion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4585_ABC-2_transporter,_and_HlyD_family_secretion_protein


id: CL:4596
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4596_Mixed,_incl._Oligopeptide/dipeptide_ABC_transporter,_C-terminal,_and_Solute-binding_protein_family_5

description:
  Mixed, incl. Oligopeptide/dipeptide ABC transporter, C-terminal, and Solute-binding protein family 5


id: CL:4598
description: Oligopeptide/dipeptide ABC transporter, C-terminal, and Solute-binding protein family 5
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4598_Oligopeptide/dipeptide_ABC_transporter,_C-terminal,_and_Solute-binding_protein_family_5


id: CL:4617
description: Mixed, incl. ABC-type transporter activity, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4617_Mixed,_incl._ABC-type_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein


id: CL:4619
description: ABC-type transporter activity, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4619_ABC-type_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein


id: CL:4620
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4620_Mixed,_incl._ABC-type_polyamine_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein

description:
  Mixed, incl. ABC-type polyamine transporter activity, and Bacterial extracellular solute-binding protein


id: CL:4621
description: ABC-type polyamine transporter activity, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4621_ABC-type_polyamine_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein


id: CL:4623
description: Polyamine transport, and ABC-type polyamine transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4623_Polyamine_transport,_and_ABC-type_polyamine_transporter_activity


id: CL:4650
description: Mixed, incl. Molybdenum ion binding, and PBP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4650_Mixed,_incl._Molybdenum_ion_binding,_and_PBP_domain


id: CL:4659
description: Mixed, incl. MalK, OB fold domain, and ABC-type carbohydrate transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4659_Mixed,_incl._MalK,_OB_fold_domain,_and_ABC-type_carbohydrate_transporter_activity


id: CL:4661
description: ABC transporter, ferric cation import, FbpC, and ABC-type carbohydrate transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4661_ABC_transporter,_ferric_cation_import,_FbpC,_and_ABC-type_carbohydrate_transporter_activity


id: CL:4680
description: NMT1/THI5 like, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4680_NMT1/THI5_like,_and_Sulfur_metabolism


id: CL:4695
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4695_Mixed,_incl._Branched-chain_amino_acid_transmembrane_transporter_activity,_and_Periplasmic_binding_protein-like_I

description:
  Mixed, incl. Branched-chain amino acid transmembrane transporter activity, and Periplasmic binding protein-like I


id: CL:4697
description: Branched-chain amino acid transmembrane transporter activity, and Leucine-binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4697_Branched-chain_amino_acid_transmembrane_transporter_activity,_and_Leucine-binding_protein_domain


id: CL:4698
description: Branched-chain amino acid transmembrane transporter activity, and Leucine binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4698_Branched-chain_amino_acid_transmembrane_transporter_activity,_and_Leucine_binding


id: CL:4699
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4699_Branched-chain_amino_acid_transmembrane_transporter_activity,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter

description:
  Branched-chain amino acid transmembrane transporter activity, and Branched-chain amino acid ATP-binding cassette transporter


id: CL:4700
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4700_Mixed,_incl._High-affinity_branched-chain_amino_acid_transport_ATP-binding_protein,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter

description:
  Mixed, incl. High-affinity branched-chain amino acid transport ATP-binding protein, and Branched-chain amino acid ATP-binding cassette transporter


id: CL:4709
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4709_Mixed,_incl._Leu/Ile/Val-binding_protein,_and_High-affinity_branched-chain_amino_acid_transport_ATP-binding_protein

description:
  Mixed, incl. Leu/Ile/Val-binding protein, and High-affinity branched-chain amino acid transport ATP-binding protein


id: CL:4718
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4718_Branched-chain_amino_acid_transmembrane_transporter_activity,_and_Receptor_family_ligand_binding_region

description:
  Branched-chain amino acid transmembrane transporter activity, and Receptor family ligand binding region


id: CL:4727
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4727_Branched-chain_amino_acid_transmembrane_transporter_activity,_and_Periplasmic_binding_protein_domain

description:
  Branched-chain amino acid transmembrane transporter activity, and Periplasmic binding protein domain


id: CL:4728
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4728_Mixed,_incl._Leu/Ile/Val-binding_protein,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter

description:
  Mixed, incl. Leu/Ile/Val-binding protein, and Branched-chain amino acid ATP-binding cassette transporter


id: CL:4737
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4737_Branched-chain_amino_acid_transmembrane_transporter_activity,_and_Periplasmic_binding_protein_domain

description:
  Branched-chain amino acid transmembrane transporter activity, and Periplasmic binding protein domain


id: CL:474
description: KH domain, and RNA 5-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:474_KH_domain,_and_RNA_5-end_processing


id: CL:4770
description: Mixed, incl. EamA domain, and NADPH-dependent FMN reductase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4770_Mixed,_incl._EamA_domain,_and_NADPH-dependent_FMN_reductase-like


id: CL:4772
description: Mixed, incl. Organic cation transport, and Amine transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4772_Mixed,_incl._Organic_cation_transport,_and_Amine_transmembrane_transporter_activity


id: CL:4774
description: Organic cation transport, and Amine transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4774_Organic_cation_transport,_and_Amine_transmembrane_transporter_activity


id: CL:4800
description: Mixed, incl. NADPH-dependent FMN reductase-like, and EamA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4800_Mixed,_incl._NADPH-dependent_FMN_reductase-like,_and_EamA_domain


id: CL:4802
description: Mixed, incl. NADPH-dependent FMN reductase-like, and Domain of unknown function DUF2179
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4802_Mixed,_incl._NADPH-dependent_FMN_reductase-like,_and_Domain_of_unknown_function_DUF2179


id: CL:4803
description: NADPH-dependent FMN reductase-like, and Sulphur relay, DsrE/F-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4803_NADPH-dependent_FMN_reductase-like,_and_Sulphur_relay,_DsrE/F-like


id: CL:4812
description: Domain of unknown function DUF2179, and EamA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4812_Domain_of_unknown_function_DUF2179,_and_EamA_domain


id: CL:4829
description: Mixed, incl. DsrEFH-like, and BCCT transporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4829_Mixed,_incl._DsrEFH-like,_and_BCCT_transporter_family


id: CL:4830
description: Mixed, incl. DsrEFH-like, and BCCT transporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4830_Mixed,_incl._DsrEFH-like,_and_BCCT_transporter_family


id: CL:4832
description: Mixed, incl. DsrH like protein, and Peroxidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4832_Mixed,_incl._DsrH_like_protein,_and_Peroxidase_activity


id: CL:485
description: Mixed, incl. charged-tRNA amino acid modification, and NusB family
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:485_Mixed,_incl._charged-tRNA_amino_acid_modification,_and_NusB_family


id: CL:4852
description: Mixed, incl. Immunoglobulin-like fold, and Cytochrome c-552/4
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4852_Mixed,_incl._Immunoglobulin-like_fold,_and_Cytochrome_c-552/4


id: CL:4868
description: Mixed, incl. Formamidase activity, and Protein kinase-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4868_Mixed,_incl._Formamidase_activity,_and_Protein_kinase-like_domain_superfamily


id: CL:4878
description: Mixed, incl. Papain-like cysteine peptidase superfamily, and Protein repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4878_Mixed,_incl._Papain-like_cysteine_peptidase_superfamily,_and_Protein_repair


id: CL:4894
description: Mixed, incl. Defense response, and DNA alkylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4894_Mixed,_incl._Defense_response,_and_DNA_alkylation


id: CL:4895
description: Mixed, incl. DNA modification, and DDE transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4895_Mixed,_incl._DNA_modification,_and_DDE_transposase_sub-family


id: CL:4896
description: DNA modification, and Fido domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4896_DNA_modification,_and_Fido_domain


id: CL:4897
description: DNA methylase, adenine-specific, and DNA restriction-modification system
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4897_DNA_methylase,_adenine-specific,_and_DNA_restriction-modification_system


id: CL:4906
description: DNA modification, and Fido domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4906_DNA_modification,_and_Fido_domain


id: CL:4915
description: DDE transposase sub-family, and Ribosomal large subunit binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4915_DDE_transposase_sub-family,_and_Ribosomal_large_subunit_binding


id: CL:4925
description: Response to virus, and Maintenance of DNA repeat elements
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4925_Response_to_virus,_and_Maintenance_of_DNA_repeat_elements


id: CL:4944
description: Mixed, incl. AsmA, and Nucleobase transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4944_Mixed,_incl._AsmA,_and_Nucleobase_transport


id: CL:4960
description: Mixed, incl. PilZ domain, and Intracellular protein-containing complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4960_Mixed,_incl._PilZ_domain,_and_Intracellular_protein-containing_complex


id: CL:4961
description: Mixed, incl. PilZ domain, and Efflux transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4961_Mixed,_incl._PilZ_domain,_and_Efflux_transmembrane_transporter_activity


id: CL:4972
description: Mixed, incl. Intracellular protein-containing complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4972_Mixed,_incl._Intracellular_protein-containing_complex


id: CL:4981
description: Mixed, incl. Conserved hypothetical protein 698, and TatD related DNase
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4981_Mixed,_incl._Conserved_hypothetical_protein_698,_and_TatD_related_DNase


id: CL:4983
description: Mixed, incl. TatD related DNase, and Conserved hypothetical protein 698
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4983_Mixed,_incl._TatD_related_DNase,_and_Conserved_hypothetical_protein_698


id: CL:4995
description: Mixed, incl. Conserved hypothetical protein 698, and UspA
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:4995_Mixed,_incl._Conserved_hypothetical_protein_698,_and_UspA


id: CL:5005
description: Mixed, incl. Oxidoreductase FAD/NAD(P)-binding, and Cytochrome c-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:5005_Mixed,_incl._Oxidoreductase_FAD/NAD(P)-binding,_and_Cytochrome_c-like_domain_superfamily


id: CL:502
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:502_Mixed,_incl._Isoprenoid_metabolic_process,_and_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Mixed, incl. Isoprenoid metabolic process, and Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: CL:5022
description: ABC transporter substrate-binding protein PnrA-like, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:5022_ABC_transporter_substrate-binding_protein_PnrA-like,_and_ABC_transporter,_permease


id: CL:503
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:503_Mixed,_incl._Isoprenoid_metabolic_process,_and_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Mixed, incl. Isoprenoid metabolic process, and Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: CL:504
description: Mixed, incl. CDP-diacylglycerol metabolic process, and Nucleoside monophosphate kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:504_Mixed,_incl._CDP-diacylglycerol_metabolic_process,_and_Nucleoside_monophosphate_kinase_activity


id: CL:5041
description: Mostly uncharacterized, incl. Helix-turn-helix XRE-family like proteins, and Extracellular region
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:5041_Mostly_uncharacterized,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Extracellular_region


id: CL:5042
description: Mostly uncharacterized, incl. Extracellular region, and 6-phosphogluconolactonase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:5042_Mostly_uncharacterized,_incl._Extracellular_region,_and_6-phosphogluconolactonase_activity


id: CL:5043
description: Mostly uncharacterized, incl. Zinc finger, DksA/TraR C4-type, and Protein processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:5043_Mostly_uncharacterized,_incl._Zinc_finger,_DksA/TraR_C4-type,_and_Protein_processing


id: CL:5045
description: Mixed, incl. Protein processing, and Proteolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:5045_Mixed,_incl._Protein_processing,_and_Proteolysis


id: CL:5047
description: Mixed, incl. Protein processing, and Proteolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:5047_Mixed,_incl._Protein_processing,_and_Proteolysis


id: CL:506
description: Mixed, incl. PDZ domain 6, and Prenyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:506_Mixed,_incl._PDZ_domain_6,_and_Prenyltransferase_activity


id: CL:5066
description: Mixed, incl. Zinc finger, DksA/TraR C4-type, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:5066_Mixed,_incl._Zinc_finger,_DksA/TraR_C4-type,_and_Coiled_coil


id: CL:5079
description: Mixed, incl. 6-phosphogluconolactonase activity, and Pentose and glucuronate interconversions
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:5079_Mixed,_incl._6-phosphogluconolactonase_activity,_and_Pentose_and_glucuronate_interconversions


id: CL:5089
description: Mostly uncharacterized, incl. Helix-turn-helix XRE-family like proteins, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:5089_Mostly_uncharacterized,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_AAA_domain


id: CL:5090
description: Mostly uncharacterized, incl. Double-stranded DNA binding, and Homeobox-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:5090_Mostly_uncharacterized,_incl._Double-stranded_DNA_binding,_and_Homeobox-like_domain_superfamily


id: CL:5092
description: Mixed, incl. Double-stranded DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:5092_Mixed,_incl._Double-stranded_DNA_binding


id: CL:5112
description: Mixed, incl. AAA domain, and Integrase, catalytic core
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:5112_Mixed,_incl._AAA_domain,_and_Integrase,_catalytic_core


id: CL:5123
description: Mixed, incl. Ferrous iron transporter FeoA domain, and Iron transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:5123_Mixed,_incl._Ferrous_iron_transporter_FeoA_domain,_and_Iron_transport


id: CL:5126
description: Ferrous iron transporter FeoA domain, and Iron transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:5126_Ferrous_iron_transporter_FeoA_domain,_and_Iron_transport


id: CL:5143
description: Mixed, incl. 5-nucleotidase activity, and Integrase, SAM-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:5143_Mixed,_incl._5-nucleotidase_activity,_and_Integrase,_SAM-like,_N-terminal


id: CL:518
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:518_Mixed,_incl._Pseudouridine_synthase_TruA/RsuA/RluB/E/F,_N-terminal,_and_ATPase_family_associated_with_various_cellular_activities_(AAA)

description:
  Mixed, incl. Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal, and ATPase family associated with various cellular activities (AAA)


id: CL:5214
description: Mixed, incl. Phospholipase D-like domain, and SOS response
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:5214_Mixed,_incl._Phospholipase_D-like_domain,_and_SOS_response


id: CL:5231
description: Mixed, incl. Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:5231_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins


id: CL:527
description: Isoprenoid metabolic process, and DNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:527_Isoprenoid_metabolic_process,_and_DNA_catabolic_process


id: CL:530
description: Isopentenyl diphosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:530_Isopentenyl_diphosphate_metabolic_process


id: CL:548
description: Mixed, incl. LOG family, and Smr domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:548_Mixed,_incl._LOG_family,_and_Smr_domain


id: CL:570
description: Mixed, incl. Trypsin-like peptidase domain, and EF-Hand 1, calcium-binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:570_Mixed,_incl._Trypsin-like_peptidase_domain,_and_EF-Hand_1,_calcium-binding_site


id: CL:572
description: Mixed, incl. EF-Hand 1, calcium-binding site, and Adaptive Immune System
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:572_Mixed,_incl._EF-Hand_1,_calcium-binding_site,_and_Adaptive_Immune_System


id: CL:574
description: Mixed, incl. Metalloenzyme, and Tetratricopeptide repeat 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:574_Mixed,_incl._Metalloenzyme,_and_Tetratricopeptide_repeat_2


id: CL:607
description: Mixed, incl. Unfolded protein binding, and Protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:607_Mixed,_incl._Unfolded_protein_binding,_and_Protein_catabolic_process


id: CL:609
description: Unfolded protein binding, and Stress response
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:609_Unfolded_protein_binding,_and_Stress_response


id: CL:611
description: Stress response, and Peptidase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:611_Stress_response,_and_Peptidase_complex


id: CL:613
description: Stress response, and Peptidase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:613_Stress_response,_and_Peptidase_complex


id: CL:616
description: Protein folding chaperone, and Stress response
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:616_Protein_folding_chaperone,_and_Stress_response


id: CL:667
description: Catalytic activity, acting on DNA, and DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:667_Catalytic_activity,_acting_on_DNA,_and_DNA_replication


id: CL:668
description: Catalytic activity, acting on DNA, and DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:668_Catalytic_activity,_acting_on_DNA,_and_DNA_replication


id: CL:669
description: Catalytic activity, acting on DNA, and DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:669_Catalytic_activity,_acting_on_DNA,_and_DNA_replication


id: CL:670
description: Catalytic activity, acting on DNA, and DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:670_Catalytic_activity,_acting_on_DNA,_and_DNA_replication


id: CL:671
description: DNA replication, and DNA repair complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:671_DNA_replication,_and_DNA_repair_complex


id: CL:673
description: Mismatch repair, and DNA repair complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:673_Mismatch_repair,_and_DNA_repair_complex


id: CL:675
description: Mixed, incl. DNA biosynthetic process, and DNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:675_Mixed,_incl._DNA_biosynthetic_process,_and_DNA_ligase_activity


id: CL:694
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:694_Mixed,_incl._DNA_topoisomerase,_type_IA,_and_DNA_recombination_and_repair_protein_RecA-like,_ATP-binding_domain

description:
  Mixed, incl. DNA topoisomerase, type IA, and DNA recombination and repair protein RecA-like, ATP-binding domain


id: CL:712
description: DNA excision, and UvrD/REP helicase N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:712_DNA_excision,_and_UvrD/REP_helicase_N-terminal_domain


id: CL:728
description: DNA replication initiation, and Primosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:728_DNA_replication_initiation,_and_Primosome


id: CL:742
description: DNA N-glycosylase activity, and Endodeoxyribonuclease activity, producing 5-phosphomonoesters
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:742_DNA_N-glycosylase_activity,_and_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: CL:754
description: Holliday junction helicase complex, and Domain of unknown function DUF3880
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:754_Holliday_junction_helicase_complex,_and_Domain_of_unknown_function_DUF3880


id: CL:771
description: Exodeoxyribonuclease V complex, and UvrD-like helicase C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:771_Exodeoxyribonuclease_V_complex,_and_UvrD-like_helicase_C-terminal_domain


id: CL:783
description: K Homology domain, type 1, and Bacterial nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:783_K_Homology_domain,_type_1,_and_Bacterial_nucleoid


id: CL:799
description: Cellular amino acid biosynthetic process, and Ribonucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:799_Cellular_amino_acid_biosynthetic_process,_and_Ribonucleoside_monophosphate_metabolic_process


id: CL:800
description: Cellular amino acid biosynthetic process, and Alanine, aspartate and glutamate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:800_Cellular_amino_acid_biosynthetic_process,_and_Alanine,_aspartate_and_glutamate_metabolism


id: CL:801
description: Cellular amino acid biosynthetic process, and One-carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:801_Cellular_amino_acid_biosynthetic_process,_and_One-carbon_metabolism


id: CL:802
description: Amino-acid biosynthesis, and Carbon-oxygen lyase activity, acting on phosphates
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:802_Amino-acid_biosynthesis,_and_Carbon-oxygen_lyase_activity,_acting_on_phosphates


id: CL:803
description: Phenylalanine, tyrosine and tryptophan biosynthesis, and Histidine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:803_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis,_and_Histidine_biosynthesis


id: CL:804
description: Aromatic amino acid family biosynthetic process, and Chorismate mutase domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:804_Aromatic_amino_acid_family_biosynthetic_process,_and_Chorismate_mutase_domain_superfamily


id: CL:805
description: Chorismate metabolic process, and Novobiocin biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:805_Chorismate_metabolic_process,_and_Novobiocin_biosynthesis


id: CL:806
description: Chorismate mutase domain superfamily, and Novobiocin biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:806_Chorismate_mutase_domain_superfamily,_and_Novobiocin_biosynthesis


id: CL:826
description: Tryptophan biosynthesis, and Peptidase C26
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:826_Tryptophan_biosynthesis,_and_Peptidase_C26


id: CL:854
description: Branched-chain amino acid metabolic process, and Lysine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:854_Branched-chain_amino_acid_metabolic_process,_and_Lysine_biosynthetic_process


id: CL:855
description: Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:855_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:857
description: C5-Branched dibasic acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:857_C5-Branched_dibasic_acid_metabolism


id: CL:869
description: Aminotransferase class IV, and 2-isopropylmalate synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:869_Aminotransferase_class_IV,_and_2-isopropylmalate_synthase_activity


id: CL:878
description: Threonine metabolic process, and Lysine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:878_Threonine_metabolic_process,_and_Lysine_biosynthesis


id: CL:880
description: Lysine biosynthesis, and ACT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:880_Lysine_biosynthesis,_and_ACT_domain


id: CL:901
description: Mixed, incl. L-serine metabolic process, and One-carbon metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:901_Mixed,_incl._L-serine_metabolic_process,_and_One-carbon_metabolic_process


id: CL:919
description: One-carbon metabolic process, and Pterin binding enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:919_One-carbon_metabolic_process,_and_Pterin_binding_enzyme


id: CL:928
description: Mixed, incl. Arginine biosynthesis, and Proline biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:928_Mixed,_incl._Arginine_biosynthesis,_and_Proline_biosynthesis


id: CL:930
description: Arginine metabolic process, and Aminotransferase class I and II
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:930_Arginine_metabolic_process,_and_Aminotransferase_class_I_and_II


id: CL:94
description: Gene expression, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:94_Gene_expression,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:96
description: Gene expression, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:96_Gene_expression,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:960
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:960_Mixed,_incl._Aminotransferases,_class-I,_pyridoxal-phosphate-binding_site,_and_Asparagine_metabolic_process

description:
  Mixed, incl. Aminotransferases, class-I, pyridoxal-phosphate-binding site, and Asparagine metabolic process


id: CL:963
description: Asparagine metabolic process, and Aminotransferases, class-I, pyridoxal-phosphate-binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:963_Asparagine_metabolic_process,_and_Aminotransferases,_class-I,_pyridoxal-phosphate-binding_site


id: CL:98
description: Translation, and Purine nucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:98_Translation,_and_Purine_nucleoside_triphosphate_biosynthetic_process


id: CL:982
description: Ribonucleoside monophosphate metabolic process, and One carbon pool by folate
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:982_Ribonucleoside_monophosphate_metabolic_process,_and_One_carbon_pool_by_folate


id: CL:983
description: Ribonucleoside monophosphate biosynthetic process, and One carbon pool by folate
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:983_Ribonucleoside_monophosphate_biosynthetic_process,_and_One_carbon_pool_by_folate


id: CL:984
description: Purine biosynthesis, and IMP cyclohydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:984_Purine_biosynthesis,_and_IMP_cyclohydrolase_activity


id: CL:988
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:988_De_novo_IMP_biosynthetic_process


id: CL:99
description: Translation, and Purine nucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:99_Translation,_and_Purine_nucleoside_triphosphate_biosynthetic_process


id: CL:990
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1592317_STRINGid_CL:990_De_novo_IMP_biosynthetic_process


id: GO:0000462
description: Maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
memo: https://amigo.geneontology.org/amigo/term/GO:0000462
golevel: 11
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0000462_Maturation_of_SSU-rRNA_from_tricistronic_rRNA_transcript_(SSU-rRNA,_5.8S_rRNA,_LSU-rRNA)


id: GO:0000701
description: Purine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0000701
golevel: 7
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0000701_Purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 10
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0000724
description: Double-strand break repair via homologous recombination
memo: https://amigo.geneontology.org/amigo/term/GO:0000724
golevel: 9
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0000724_Double-strand_break_repair_via_homologous_recombination


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0002926
description: tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation
memo: https://amigo.geneontology.org/amigo/term/GO:0002926
golevel: 13
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0002926_tRNA_wobble_base_5-methoxycarbonylmethyl-2-thiouridinylation


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003864
description: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003864
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0003864_3-methyl-2-oxobutanoate_hydroxymethyltransferase_activity


id: GO:0003882
description: CDP-diacylglycerol-serine O-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003882
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0003882_CDP-diacylglycerol-serine_O-phosphatidyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0004015
description: adenosylmethionine-8-amino-7-oxononanoate transaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004015
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0004015_adenosylmethionine-8-amino-7-oxononanoate_transaminase_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004316
description: 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004316
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0004316_3-oxoacyl-[acyl-carrier-protein]_reductase_(NADPH)_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004318
description: Enoyl-[acyl-carrier-protein] reductase (NADH) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004318
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0004318_Enoyl-[acyl-carrier-protein]_reductase_(NADH)_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004471
description: Malate dehydrogenase (decarboxylating) (NAD+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004471
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0004471_Malate_dehydrogenase_(decarboxylating)_(NAD+)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004489
description: Methylenetetrahydrofolate reductase (NAD(P)H) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004489
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0004489_Methylenetetrahydrofolate_reductase_(NAD(P)H)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004616
description: Phosphogluconate dehydrogenase (decarboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004616
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0004616_Phosphogluconate_dehydrogenase_(decarboxylating)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004715
description: Non-membrane spanning protein tyrosine kinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004715
golevel: 7
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0004715_Non-membrane_spanning_protein_tyrosine_kinase_activity


id: GO:0004719
description: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004719
golevel: 8
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0004719_protein-L-isoaspartate_(D-aspartate)_O-methyltransferase_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0005315
description: Inorganic phosphate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005315
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0005315_Inorganic_phosphate_transmembrane_transporter_activity


id: GO:0005350
description: Pyrimidine nucleobase transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005350
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0005350_Pyrimidine_nucleobase_transmembrane_transporter_activity


id: GO:0006490
description: Oligosaccharide-lipid intermediate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0006490
golevel: 5
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0006490_Oligosaccharide-lipid_intermediate_biosynthetic_process


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 11
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0008028
description: Monocarboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008028
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0008028_Monocarboxylic_acid_transmembrane_transporter_activity


id: GO:0008271
description: Secondary active sulfate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008271
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0008271_Secondary_active_sulfate_transmembrane_transporter_activity


id: GO:0008425
description: 2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008425
golevel: 7
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0008425_2-polyprenyl-6-methoxy-1,4-benzoquinone_methyltransferase_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 7
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008685
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008685
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0008685_2-C-methyl-D-erythritol_2,4-cyclodiphosphate_synthase_activity


id: GO:0008686
description: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008686
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0008686_3,4-dihydroxy-2-butanone-4-phosphate_synthase_activity


id: GO:0008690
description: 3-deoxy-manno-octulosonate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008690
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0008690_3-deoxy-manno-octulosonate_cytidylyltransferase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008759
description: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008759
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0008759_UDP-3-O-[3-hydroxymyristoyl]_N-acetylglucosamine_deacetylase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008780
description: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008780
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0008780_acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine_O-acyltransferase_activity


id: GO:0008825
description: Cyclopropane-fatty-acyl-phospholipid synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008825
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0008825_Cyclopropane-fatty-acyl-phospholipid_synthase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0008965
description: Phosphoenolpyruvate-protein phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008965
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0008965_Phosphoenolpyruvate-protein_phosphotransferase_activity


id: GO:0008982
description: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008982
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0008982_protein-N(PI)-phosphohistidine-sugar_phosphotransferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 9
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 9
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009139
description: Pyrimidine nucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009139
golevel: 9
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0009139_Pyrimidine_nucleoside_diphosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 9
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009157
description: Deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009157
golevel: 9
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0009157_Deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 10
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 9
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 10
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009175
description: Pyrimidine ribonucleoside monophosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009175
golevel: 10
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0009175_Pyrimidine_ribonucleoside_monophosphate_catabolic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 9
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 10
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009196
description: Pyrimidine deoxyribonucleoside diphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009196
golevel: 9
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0009196_Pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process


id: GO:0009197
description: Pyrimidine deoxyribonucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009197
golevel: 10
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0009197_Pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 10
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 9
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 10
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009210
description: Pyrimidine ribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009210
golevel: 10
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0009210_Pyrimidine_ribonucleoside_triphosphate_catabolic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 9
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 10
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 10
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 9
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 10
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009401
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system
memo: https://amigo.geneontology.org/amigo/term/GO:0009401
golevel: 8
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0009401_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system


id: GO:0009427
description: Bacterial-type flagellum basal body, distal rod, L ring
memo: https://amigo.geneontology.org/amigo/term/GO:0009427
golevel: 8
name:
  GOCC.STRING_v12.0_1592317_STRINGid_GO:0009427_Bacterial-type_flagellum_basal_body,_distal_rod,_L_ring


id: GO:0009428
description: Bacterial-type flagellum basal body, distal rod, P ring
memo: https://amigo.geneontology.org/amigo/term/GO:0009428
golevel: 8
name:
  GOCC.STRING_v12.0_1592317_STRINGid_GO:0009428_Bacterial-type_flagellum_basal_body,_distal_rod,_P_ring


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 6
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 6
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0010604
description: Positive regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010604
golevel: 5
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0010604_Positive_regulation_of_macromolecule_metabolic_process


id: GO:0010605
description: Negative regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010605
golevel: 5
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0010605_Negative_regulation_of_macromolecule_metabolic_process


id: GO:0015169
description: glycerol-3-phosphate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015169
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0015169_glycerol-3-phosphate_transmembrane_transporter_activity


id: GO:0015173
description: Aromatic amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015173
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0015173_Aromatic_amino_acid_transmembrane_transporter_activity


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
golevel: 3
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015415
description: ATPase-coupled phosphate ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015415
golevel: 7
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0015415_ATPase-coupled_phosphate_ion_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015605
description: Organophosphate ester transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015605
golevel: 3
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0015605_Organophosphate_ester_transmembrane_transporter_activity


id: GO:0015651
description: Quaternary ammonium group transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015651
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0015651_Quaternary_ammonium_group_transmembrane_transporter_activity


id: GO:0015658
description: Branched-chain amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015658
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0015658_Branched-chain_amino_acid_transmembrane_transporter_activity


id: GO:0015975
description: Energy derivation by oxidation of reduced inorganic compounds
memo: https://amigo.geneontology.org/amigo/term/GO:0015975
golevel: 4
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0015975_Energy_derivation_by_oxidation_of_reduced_inorganic_compounds


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016622
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, cytochrome as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016622
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016622_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_cytochrome_as_acceptor


id: GO:0016624
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016624
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016624_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_disulfide_as_acceptor


id: GO:0016625
memo: https://amigo.geneontology.org/amigo/term/GO:0016625
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016625_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_iron-sulfur_protein_as_acceptor

description:
  Oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016642
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016642
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016642_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_disulfide_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016652
description: Oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016652
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016652_Oxidoreductase_activity,_acting_on_NAD(P)H,_NAD(P)_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016661
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016661
golevel: 3
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016661_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors


id: GO:0016663
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016663
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016663_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors,_oxygen_as_acceptor


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016671
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016671
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016671_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: GO:0016673
description: Oxidoreductase activity, acting on a sulfur group of donors, iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016673
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016673_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_iron-sulfur_protein_as_acceptor


id: GO:0016684
description: Oxidoreductase activity, acting on peroxide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016684
golevel: 3
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016684_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


id: GO:0016699
description: Oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016699
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016699_Oxidoreductase_activity,_acting_on_hydrogen_as_donor,_iron-sulfur_protein_as_acceptor


id: GO:0016701
description: Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
memo: https://amigo.geneontology.org/amigo/term/GO:0016701
golevel: 3
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016701_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen


id: GO:0016702
memo: https://amigo.geneontology.org/amigo/term/GO:0016702
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016702_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_two_atoms_of_oxygen

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen


id: GO:0016703
memo: https://amigo.geneontology.org/amigo/term/GO:0016703
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016703_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_one_atom_of_oxygen_(internal_monooxygenases_or_internal_mixed_function_oxidases)

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)


id: GO:0016705
memo: https://amigo.geneontology.org/amigo/term/GO:0016705
golevel: 3
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016705_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: GO:0016709
memo: https://amigo.geneontology.org/amigo/term/GO:0016709
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016709_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen


id: GO:0016721
description: Oxidoreductase activity, acting on superoxide radicals as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016721
golevel: 3
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016721_Oxidoreductase_activity,_acting_on_superoxide_radicals_as_acceptor


id: GO:0016724
description: Oxidoreductase activity, acting on metal ions, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016724
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016724_Oxidoreductase_activity,_acting_on_metal_ions,_oxygen_as_acceptor


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016730
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016730
golevel: 3
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016730_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016773
description: Phosphotransferase activity, alcohol group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016773
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016773_Phosphotransferase_activity,_alcohol_group_as_acceptor


id: GO:0016774
description: Phosphotransferase activity, carboxyl group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016774
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016774_Phosphotransferase_activity,_carboxyl_group_as_acceptor


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016837
description: Carbon-oxygen lyase activity, acting on polysaccharides
memo: https://amigo.geneontology.org/amigo/term/GO:0016837
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016837_Carbon-oxygen_lyase_activity,_acting_on_polysaccharides


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016868
description: Intramolecular transferase activity, phosphotransferases
memo: https://amigo.geneontology.org/amigo/term/GO:0016868
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016868_Intramolecular_transferase_activity,_phosphotransferases


id: GO:0016869
description: Intramolecular transferase activity, transferring amino groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016869
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016869_Intramolecular_transferase_activity,_transferring_amino_groups


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016888
description: Endodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016888
golevel: 7
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016888_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016889
description: Endodeoxyribonuclease activity, producing 3-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016889
golevel: 7
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016889_Endodeoxyribonuclease_activity,_producing_3-phosphomonoesters


id: GO:0016891
description: Endoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016891
golevel: 7
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016891_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016894
memo: https://amigo.geneontology.org/amigo/term/GO:0016894
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016894_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_3-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3-phosphomonoesters


id: GO:0016895
description: Exodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016895
golevel: 7
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016895_Exodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016896
description: Exoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016896
golevel: 7
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016896_Exoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016901
memo: https://amigo.geneontology.org/amigo/term/GO:0016901
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016901_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor


id: GO:0016903
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016903
golevel: 3
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0016903_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors


id: GO:0018315
description: Molybdenum incorporation into molybdenum-molybdopterin complex
memo: https://amigo.geneontology.org/amigo/term/GO:0018315
golevel: 7
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0018315_Molybdenum_incorporation_into_molybdenum-molybdopterin_complex


id: GO:0018339
description: peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid
memo: https://amigo.geneontology.org/amigo/term/GO:0018339
golevel: 8
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0018339_peptidyl-L-beta-methylthioaspartic_acid_biosynthetic_process_from_peptidyl-aspartic_acid


id: GO:0019171
description: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019171
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0019171_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0019219
description: Regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019219
golevel: 5
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0019219_Regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0019288
description: Isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0019288
golevel: 8
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0019288_Isopentenyl_diphosphate_biosynthetic_process,_methylerythritol_4-phosphate_pathway


id: GO:0019829
description: ATPase-coupled cation transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019829
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0019829_ATPase-coupled_cation_transmembrane_transporter_activity


id: GO:0030435
description: Sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0030435
golevel: 3
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0030435_Sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0030604
description: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0030604
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0030604_1-deoxy-D-xylulose-5-phosphate_reductoisomerase_activity


id: GO:0030698
description: 5,10-methylenetetrahydrofolate-dependent tRNA (m5U54) methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0030698
golevel: 9
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0030698_5,10-methylenetetrahydrofolate-dependent_tRNA_(m5U54)_methyltransferase_activity


id: GO:0031233
description: Intrinsic component of external side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031233
name:
  GOCC.STRING_v12.0_1592317_STRINGid_GO:0031233_Intrinsic_component_of_external_side_of_plasma_membrane


id: GO:0031234
description: Extrinsic component of cytoplasmic side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031234
golevel: 6
name:
  GOCC.STRING_v12.0_1592317_STRINGid_GO:0031234_Extrinsic_component_of_cytoplasmic_side_of_plasma_membrane


id: GO:0031235
description: Intrinsic component of the cytoplasmic side of the plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031235
name:
  GOCC.STRING_v12.0_1592317_STRINGid_GO:0031235_Intrinsic_component_of_the_cytoplasmic_side_of_the_plasma_membrane


id: GO:0031250
description: Anaerobic ribonucleoside-triphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031250
golevel: 4
name:
  GOCC.STRING_v12.0_1592317_STRINGid_GO:0031250_Anaerobic_ribonucleoside-triphosphate_reductase_complex


id: GO:0031317
description: Tripartite ATP-independent periplasmic transporter complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031317
golevel: 3
name:
  GOCC.STRING_v12.0_1592317_STRINGid_GO:0031317_Tripartite_ATP-independent_periplasmic_transporter_complex


id: GO:0031554
description: Regulation of DNA-templated transcription, termination
memo: https://amigo.geneontology.org/amigo/term/GO:0031554
golevel: 11
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0031554_Regulation_of_DNA-templated_transcription,_termination


id: GO:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
golevel: 3
name:
  GOCC.STRING_v12.0_1592317_STRINGid_GO:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GO:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
golevel: 3
name:
  GOCC.STRING_v12.0_1592317_STRINGid_GO:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GO:0033283
description: ATPase-coupled organic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033283
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0033283_ATPase-coupled_organic_acid_transmembrane_transporter_activity


id: GO:0033284
description: ATPase-coupled carboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033284
golevel: 7
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0033284_ATPase-coupled_carboxylic_acid_transmembrane_transporter_activity


id: GO:0033362
description: Lysine biosynthetic process via diaminopimelate, diaminopimelate-aminotransferase pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0033362
golevel: 12
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0033362_Lysine_biosynthetic_process_via_diaminopimelate,_diaminopimelate-aminotransferase_pathway


id: GO:0033467
description: CMP-keto-3-deoxy-D-manno-octulosonic acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033467
golevel: 7
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0033467_CMP-keto-3-deoxy-D-manno-octulosonic_acid_metabolic_process


id: GO:0033468
description: CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033468
golevel: 8
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0033468_CMP-keto-3-deoxy-D-manno-octulosonic_acid_biosynthetic_process


id: GO:0033695
description: Oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0033695
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0033695_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_quinone_or_similar_compound_as_acceptor


id: GO:0033744
description: L-methionine:thioredoxin-disulfide S-oxidoreductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033744
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0033744_L-methionine:thioredoxin-disulfide_S-oxidoreductase_activity


id: GO:0033818
description: Beta-ketoacyl-acyl-carrier-protein synthase III activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033818
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0033818_Beta-ketoacyl-acyl-carrier-protein_synthase_III_activity


id: GO:0034023
description: 5-(carboxyamino)imidazole ribonucleotide mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034023
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0034023_5-(carboxyamino)imidazole_ribonucleotide_mutase_activity


id: GO:0034249
description: Negative regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034249
golevel: 6
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0034249_Negative_regulation_of_cellular_amide_metabolic_process


id: GO:0034250
description: Positive regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034250
golevel: 6
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0034250_Positive_regulation_of_cellular_amide_metabolic_process


id: GO:0034404
description: Nucleobase-containing small molecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034404
golevel: 6
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0034404_Nucleobase-containing_small_molecule_biosynthetic_process


id: GO:0034639
description: L-amino acid efflux transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034639
golevel: 7
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0034639_L-amino_acid_efflux_transmembrane_transporter_activity


id: GO:0034656
description: Nucleobase-containing small molecule catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034656
golevel: 6
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0034656_Nucleobase-containing_small_molecule_catabolic_process


id: GO:0035592
description: Establishment of protein localization to extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0035592
golevel: 6
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0035592_Establishment_of_protein_localization_to_extracellular_region


id: GO:0035998
description: 7,8-dihydroneopterin 3-triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0035998
golevel: 6
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0035998_7,8-dihydroneopterin_3-triphosphate_biosynthetic_process


id: GO:0036361
description: Racemase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0036361
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0036361_Racemase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0042040
description: Metal incorporation into metallo-molybdopterin complex
memo: https://amigo.geneontology.org/amigo/term/GO:0042040
golevel: 6
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0042040_Metal_incorporation_into_metallo-molybdopterin_complex


id: GO:0042083
description: 5,10-methylenetetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042083
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0042083_5,10-methylenetetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042084
description: 5-methyltetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042084
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0042084_5-methyltetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042777
description: Proton motive force-driven plasma membrane ATP synthesis
memo: https://amigo.geneontology.org/amigo/term/GO:0042777
golevel: 13
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0042777_Proton_motive_force-driven_plasma_membrane_ATP_synthesis


id: GO:0043165
description: Gram-negative-bacterium-type cell outer membrane assembly
memo: https://amigo.geneontology.org/amigo/term/GO:0043165
golevel: 6
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0043165_Gram-negative-bacterium-type_cell_outer_membrane_assembly


id: GO:0043225
description: ATPase-coupled inorganic anion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043225
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0043225_ATPase-coupled_inorganic_anion_transmembrane_transporter_activity


id: GO:0043333
description: 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043333
golevel: 8
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0043333_2-octaprenyl-6-methoxy-1,4-benzoquinone_methylase_activity


id: GO:0043709
description: Cell adhesion involved in single-species biofilm formation
memo: https://amigo.geneontology.org/amigo/term/GO:0043709
golevel: 7
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0043709_Cell_adhesion_involved_in_single-species_biofilm_formation


id: GO:0043772
description: Acyl-phosphate glycerol-3-phosphate acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043772
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0043772_Acyl-phosphate_glycerol-3-phosphate_acyltransferase_activity


id: GO:0043811
description: Phosphate:acyl-[acyl carrier protein] acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043811
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0043811_Phosphate:acyl-[acyl_carrier_protein]_acyltransferase_activity


id: GO:0043815
description: Phosphoribosylglycinamide formyltransferase 2 activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043815
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0043815_Phosphoribosylglycinamide_formyltransferase_2_activity


id: GO:0044419
description: Biological process involved in interspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0044419
golevel: 1
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0044419_Biological_process_involved_in_interspecies_interaction_between_organisms


id: GO:0044769
description: ATPase activity, coupled to transmembrane movement of ions, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0044769
golevel: 7
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0044769_ATPase_activity,_coupled_to_transmembrane_movement_of_ions,_rotational_mechanism


id: GO:0045261
description: Proton-transporting ATP synthase complex, catalytic core F(1)
memo: https://amigo.geneontology.org/amigo/term/GO:0045261
golevel: 6
name:
  GOCC.STRING_v12.0_1592317_STRINGid_GO:0045261_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: GO:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
golevel: 6
name:
  GOCC.STRING_v12.0_1592317_STRINGid_GO:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GO:0045934
description: Negative regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045934
golevel: 6
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0045934_Negative_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0045935
description: Positive regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045935
golevel: 6
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0045935_Positive_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0046428
description: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046428
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0046428_1,4-dihydroxy-2-naphthoate_octaprenyltransferase_activity


id: GO:0046429
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046429
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0046429_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_synthase_activity


id: GO:0046537
description: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046537
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0046537_2,3-bisphosphoglycerate-independent_phosphoglycerate_mutase_activity


id: GO:0046912
description: Acyltransferase activity, acyl groups converted into alkyl on transfer
memo: https://amigo.geneontology.org/amigo/term/GO:0046912
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0046912_Acyltransferase_activity,_acyl_groups_converted_into_alkyl_on_transfer


id: GO:0046915
description: Transition metal ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046915
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0046915_Transition_metal_ion_transmembrane_transporter_activity


id: GO:0046933
description: Proton-transporting ATP synthase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046933
golevel: 8
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0046933_Proton-transporting_ATP_synthase_activity,_rotational_mechanism


id: GO:0046961
description: Proton-transporting ATPase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046961
golevel: 8
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0046961_Proton-transporting_ATPase_activity,_rotational_mechanism


id: GO:0046992
description: Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond
memo: https://amigo.geneontology.org/amigo/term/GO:0046992
golevel: 3
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0046992_Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond


id: GO:0047151
description: methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase (FADH2-oxidizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047151
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0047151_methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase_(FADH2-oxidizing)_activity


id: GO:0047304
description: 2-aminoethylphosphonate-pyruvate transaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047304
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0047304_2-aminoethylphosphonate-pyruvate_transaminase_activity


id: GO:0047334
description: diphosphate-fructose-6-phosphate 1-phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047334
golevel: 7
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0047334_diphosphate-fructose-6-phosphate_1-phosphotransferase_activity


id: GO:0047451
description: 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047451
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0047451_3-hydroxyoctanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0047480
description: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047480
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0047480_UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine_ligase_activity


id: GO:0048646
description: Anatomical structure formation involved in morphogenesis
memo: https://amigo.geneontology.org/amigo/term/GO:0048646
golevel: 2
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0048646_Anatomical_structure_formation_involved_in_morphogenesis


id: GO:0050511
description: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050511
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0050511_Undecaprenyldiphospho-muramoylpentapeptide_beta-N-acetylglucosaminyltransferase_activity


id: GO:0050515
description: 4-(cytidine 5-diphospho)-2-C-methyl-D-erythritol kinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050515
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0050515_4-(cytidine_5-diphospho)-2-C-methyl-D-erythritol_kinase_activity


id: GO:0050518
description: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050518
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0050518_2-C-methyl-D-erythritol_4-phosphate_cytidylyltransferase_activity


id: GO:0050566
description: asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050566
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0050566_asparaginyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0050567
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050567
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0050567_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0051075
description: S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051075
golevel: 3
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0051075_S-adenosylmethionine:tRNA_ribosyltransferase-isomerase_activity


id: GO:0051172
description: Negative regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051172
golevel: 5
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0051172_Negative_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051173
description: Positive regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051173
golevel: 5
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0051173_Positive_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051240
description: Positive regulation of multicellular organismal process
memo: https://amigo.geneontology.org/amigo/term/GO:0051240
golevel: 4
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0051240_Positive_regulation_of_multicellular_organismal_process


id: GO:0051703
description: Biological process involved in intraspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0051703
golevel: 1
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0051703_Biological_process_involved_in_intraspecies_interaction_between_organisms


id: GO:0051745
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051745
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0051745_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_reductase_activity


id: GO:0051748
description: UTP-monosaccharide-1-phosphate uridylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051748
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0051748_UTP-monosaccharide-1-phosphate_uridylyltransferase_activity


id: GO:0051991
memo: https://amigo.geneontology.org/amigo/term/GO:0051991
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0051991_UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol_4-beta-N-acetylglucosaminlytransferase_activity

description:
  UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity


id: GO:0051992
memo: https://amigo.geneontology.org/amigo/term/GO:0051992
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0051992_UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate_transferase_activity

description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity


id: GO:0052038
description: Modulation by symbiont of host intracellular transport
memo: https://amigo.geneontology.org/amigo/term/GO:0052038
golevel: 6
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0052038_Modulation_by_symbiont_of_host_intracellular_transport


id: GO:0052592
description: Oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0052592
golevel: 4
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0052592_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_with_an_iron-sulfur_protein_as_acceptor


id: GO:0052740
description: 1-acyl-2-lysophosphatidylserine acylhydrolase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052740
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0052740_1-acyl-2-lysophosphatidylserine_acylhydrolase_activity


id: GO:0052908
description: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052908
golevel: 9
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0052908_16S_rRNA_(adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase_activity


id: GO:0052929
description: ATP:3-cytidine-cytidine-tRNA adenylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052929
golevel: 6
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0052929_ATP:3-cytidine-cytidine-tRNA_adenylyltransferase_activity


id: GO:0055052
description: ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing
memo: https://amigo.geneontology.org/amigo/term/GO:0055052
golevel: 7
name:
  GOCC.STRING_v12.0_1592317_STRINGid_GO:0055052_ATP-binding_cassette_(ABC)_transporter_complex,_substrate-binding_subunit-containing


id: GO:0055086
description: Nucleobase-containing small molecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0055086
golevel: 3
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0055086_Nucleobase-containing_small_molecule_metabolic_process


id: GO:0061695
description: Transferase complex, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0061695
golevel: 4
name:
  GOCC.STRING_v12.0_1592317_STRINGid_GO:0061695_Transferase_complex,_transferring_phosphorus-containing_groups


id: GO:0070626
memo: https://amigo.geneontology.org/amigo/term/GO:0070626
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0070626_(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)_succinate_lyase_(fumarate-forming)_activity

description:
  (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity


id: GO:0071575
description: Integral component of external side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0071575
name:
  GOCC.STRING_v12.0_1592317_STRINGid_GO:0071575_Integral_component_of_external_side_of_plasma_membrane


id: GO:0071951
description: Conversion of methionyl-tRNA to N-formyl-methionyl-tRNA
memo: https://amigo.geneontology.org/amigo/term/GO:0071951
golevel: 12
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0071951_Conversion_of_methionyl-tRNA_to_N-formyl-methionyl-tRNA


id: GO:0072349
description: Modified amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0072349
golevel: 3
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0072349_Modified_amino_acid_transmembrane_transporter_activity


id: GO:0072531
description: Pyrimidine-containing compound transmembrane transport
memo: https://amigo.geneontology.org/amigo/term/GO:0072531
golevel: 5
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0072531_Pyrimidine-containing_compound_transmembrane_transport


id: GO:0072599
description: Establishment of protein localization to endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0072599
golevel: 7
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0072599_Establishment_of_protein_localization_to_endoplasmic_reticulum


id: GO:0097171
description: ADP-L-glycero-beta-D-manno-heptose biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0097171
golevel: 8
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0097171_ADP-L-glycero-beta-D-manno-heptose_biosynthetic_process


id: GO:0097588
description: Archaeal or bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:0097588
golevel: 4
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0097588_Archaeal_or_bacterial-type_flagellum-dependent_cell_motility


id: GO:0102027
description: S-adenosylmethionine:2-demethylquinol-8 methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102027
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0102027_S-adenosylmethionine:2-demethylquinol-8_methyltransferase_activity


id: GO:0102094
description: S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102094
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0102094_S-adenosylmethionine:2-demethylmenaquinol_methyltransferase_activity


id: GO:0102752
memo: https://amigo.geneontology.org/amigo/term/GO:0102752
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0102752_1,4-alpha-glucan_branching_enzyme_activity_(using_a_glucosylated_glycogenin_as_primer_for_glycogen_synthesis)

description:
  1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis)


id: GO:0102955
description: S-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102955
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0102955_S-adenosylmethionine:2-demethylmenaquinol-7_methyltransferase_activity


id: GO:0106074
description: aminoacyl-tRNA metabolism involved in translational fidelity
memo: https://amigo.geneontology.org/amigo/term/GO:0106074
golevel: 9
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:0106074_aminoacyl-tRNA_metabolism_involved_in_translational_fidelity


id: GO:0140078
description: Class I DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0140078
golevel: 5
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:0140078_Class_I_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:1900191
description: Negative regulation of single-species biofilm formation
memo: https://amigo.geneontology.org/amigo/term/GO:1900191
golevel: 7
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:1900191_Negative_regulation_of_single-species_biofilm_formation


id: GO:1900376
description: Regulation of secondary metabolite biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:1900376
golevel: 5
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:1900376_Regulation_of_secondary_metabolite_biosynthetic_process


id: GO:1900377
description: Negative regulation of secondary metabolite biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:1900377
golevel: 6
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:1900377_Negative_regulation_of_secondary_metabolite_biosynthetic_process


id: GO:1901505
description: Carbohydrate derivative transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:1901505
golevel: 3
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:1901505_Carbohydrate_derivative_transmembrane_transporter_activity


id: GO:1901618
description: Organic hydroxy compound transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:1901618
golevel: 3
name:
  GOMF.STRING_v12.0_1592317_STRINGid_GO:1901618_Organic_hydroxy_compound_transmembrane_transporter_activity


id: GO:1901800
description: Positive regulation of proteasomal protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1901800
golevel: 9
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:1901800_Positive_regulation_of_proteasomal_protein_catabolic_process


id: GO:1902021
description: Regulation of bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:1902021
golevel: 6
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:1902021_Regulation_of_bacterial-type_flagellum-dependent_cell_motility


id: GO:1902201
description: Negative regulation of bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:1902201
golevel: 7
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:1902201_Negative_regulation_of_bacterial-type_flagellum-dependent_cell_motility


id: GO:1902221
description: Erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1902221
golevel: 8
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:1902221_Erythrose_4-phosphate/phosphoenolpyruvate_family_amino_acid_metabolic_process


id: GO:1902223
description: Erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:1902223
golevel: 9
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:1902223_Erythrose_4-phosphate/phosphoenolpyruvate_family_amino_acid_biosynthetic_process


id: GO:1903050
description: Regulation of proteolysis involved in protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1903050
golevel: 7
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:1903050_Regulation_of_proteolysis_involved_in_protein_catabolic_process


id: GO:1903052
description: Positive regulation of proteolysis involved in protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1903052
golevel: 8
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:1903052_Positive_regulation_of_proteolysis_involved_in_protein_catabolic_process


id: GO:1903507
description: Negative regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903507
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:1903507_Negative_regulation_of_nucleic_acid-templated_transcription


id: GO:1903508
description: Positive regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903508
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:1903508_Positive_regulation_of_nucleic_acid-templated_transcription


id: GO:1904950
description: Negative regulation of establishment of protein localization
memo: https://amigo.geneontology.org/amigo/term/GO:1904950
golevel: 7
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:1904950_Negative_regulation_of_establishment_of_protein_localization


id: GO:1904951
description: Positive regulation of establishment of protein localization
memo: https://amigo.geneontology.org/amigo/term/GO:1904951
golevel: 7
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:1904951_Positive_regulation_of_establishment_of_protein_localization


id: GO:1990961
description: Xenobiotic detoxification by transmembrane export across the plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:1990961
golevel: 6
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:1990961_Xenobiotic_detoxification_by_transmembrane_export_across_the_plasma_membrane


id: GO:2000112
description: Regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000112
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:2000112_Regulation_of_cellular_macromolecule_biosynthetic_process


id: GO:2000113
description: Negative regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000113
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:2000113_Negative_regulation_of_cellular_macromolecule_biosynthetic_process


id: GO:2001060
description: D-glycero-D-manno-heptose 7-phosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:2001060
golevel: 5
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:2001060_D-glycero-D-manno-heptose_7-phosphate_metabolic_process


id: GO:2001061
description: D-glycero-D-manno-heptose 7-phosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2001061
golevel: 6
name:
  GOBP.STRING_v12.0_1592317_STRINGid_GO:2001061_D-glycero-D-manno-heptose_7-phosphate_biosynthetic_process


id: GOCC:0000015
description: Phosphopyruvate hydratase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000015
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0000015_Phosphopyruvate_hydratase_complex


id: GOCC:0000408
description: EKC/KEOPS complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000408
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0000408_EKC/KEOPS_complex


id: GOCC:0000428
description: DNA-directed RNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000428
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0000428_DNA-directed_RNA_polymerase_complex


id: GOCC:0000502
description: Proteasome complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000502
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0000502_Proteasome_complex


id: GOCC:0000775
description: Chromosome, centromeric region
memo: https://amigo.geneontology.org/amigo/term/GO:0000775
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0000775_Chromosome,_centromeric_region


id: GOCC:0000779
description: Condensed chromosome, centromeric region
memo: https://amigo.geneontology.org/amigo/term/GO:0000779
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0000779_Condensed_chromosome,_centromeric_region


id: GOCC:0000781
description: Chromosome, telomeric region
memo: https://amigo.geneontology.org/amigo/term/GO:0000781
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0000781_Chromosome,_telomeric_region


id: GOCC:0000793
description: Condensed chromosome
memo: https://amigo.geneontology.org/amigo/term/GO:0000793
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0000793_Condensed_chromosome


id: GOCC:0000930
description: Gamma-tubulin complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000930
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0000930_Gamma-tubulin_complex


id: GOCC:0000931
description: Gamma-tubulin large complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000931
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0000931_Gamma-tubulin_large_complex


id: GOCC:0002189
description: Ribose phosphate diphosphokinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0002189
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0002189_Ribose_phosphate_diphosphokinase_complex


id: GOCC:0005576
description: Extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0005576
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0005576_Extracellular_region


id: GOCC:0005615
description: Extracellular space
memo: https://amigo.geneontology.org/amigo/term/GO:0005615
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0005615_Extracellular_space


id: GOCC:0005727
description: Extrachromosomal circular DNA
memo: https://amigo.geneontology.org/amigo/term/GO:0005727
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0005727_Extrachromosomal_circular_DNA


id: GOCC:0005740
description: Mitochondrial envelope
memo: https://amigo.geneontology.org/amigo/term/GO:0005740
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0005740_Mitochondrial_envelope


id: GOCC:0005741
description: Mitochondrial outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005741
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0005741_Mitochondrial_outer_membrane


id: GOCC:0005743
description: Mitochondrial inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005743
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0005743_Mitochondrial_inner_membrane


id: GOCC:0005746
description: Mitochondrial respirasome
memo: https://amigo.geneontology.org/amigo/term/GO:0005746
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0005746_Mitochondrial_respirasome


id: GOCC:0005747
description: Mitochondrial respiratory chain complex I
memo: https://amigo.geneontology.org/amigo/term/GO:0005747
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0005747_Mitochondrial_respiratory_chain_complex_I


id: GOCC:0005759
description: Mitochondrial matrix
memo: https://amigo.geneontology.org/amigo/term/GO:0005759
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0005759_Mitochondrial_matrix


id: GOCC:0005783
description: Endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0005783
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0005783_Endoplasmic_reticulum


id: GOCC:0005788
description: Endoplasmic reticulum lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0005788
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0005788_Endoplasmic_reticulum_lumen


id: GOCC:0005789
description: Endoplasmic reticulum membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005789
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0005789_Endoplasmic_reticulum_membrane


id: GOCC:0005798
description: Golgi-associated vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0005798
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0005798_Golgi-associated_vesicle


id: GOCC:0005815
description: Microtubule organizing center
memo: https://amigo.geneontology.org/amigo/term/GO:0005815
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0005815_Microtubule_organizing_center


id: GOCC:0005835
description: Fatty acid synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005835
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0005835_Fatty_acid_synthase_complex


id: GOCC:0005839
description: Proteasome core complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005839
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0005839_Proteasome_core_complex


id: GOCC:0005847
description: mRNA cleavage and polyadenylation specificity factor complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005847
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0005847_mRNA_cleavage_and_polyadenylation_specificity_factor_complex


id: GOCC:0005849
description: mRNA cleavage factor complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005849
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0005849_mRNA_cleavage_factor_complex


id: GOCC:0005882
description: Intermediate filament
memo: https://amigo.geneontology.org/amigo/term/GO:0005882
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0005882_Intermediate_filament


id: GOCC:0005887
description: Integral component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005887
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0005887_Integral_component_of_plasma_membrane


id: GOCC:0005911
description: Cell-cell junction
memo: https://amigo.geneontology.org/amigo/term/GO:0005911
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0005911_Cell-cell_junction


id: GOCC:0005945
description: 6-phosphofructokinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005945
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0005945_6-phosphofructokinase_complex


id: GOCC:0005948
description: Acetolactate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005948
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0005948_Acetolactate_synthase_complex


id: GOCC:0005951
description: Carbamoyl-phosphate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005951
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0005951_Carbamoyl-phosphate_synthase_complex


id: GOCC:0005960
description: Glycine cleavage complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005960
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0005960_Glycine_cleavage_complex


id: GOCC:0005971
description: Ribonucleoside-diphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005971
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0005971_Ribonucleoside-diphosphate_reductase_complex


id: GOCC:0008023
description: Transcription elongation factor complex
memo: https://amigo.geneontology.org/amigo/term/GO:0008023
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0008023_Transcription_elongation_factor_complex


id: GOCC:0008076
description: Voltage-gated potassium channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0008076
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0008076_Voltage-gated_potassium_channel_complex


id: GOCC:0009279
description: Cell outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009279
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0009279_Cell_outer_membrane


id: GOCC:0009288
description: Bacterial-type flagellum
memo: https://amigo.geneontology.org/amigo/term/GO:0009288
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0009288_Bacterial-type_flagellum


id: GOCC:0009316
description: 3-isopropylmalate dehydratase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009316
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0009316_3-isopropylmalate_dehydratase_complex


id: GOCC:0009317
description: acetyl-CoA carboxylase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009317
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0009317_acetyl-CoA_carboxylase_complex


id: GOCC:0009318
description: Exodeoxyribonuclease VII complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009318
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0009318_Exodeoxyribonuclease_VII_complex


id: GOCC:0009325
description: Nitrate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009325
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0009325_Nitrate_reductase_complex


id: GOCC:0009326
description: Formate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009326
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0009326_Formate_dehydrogenase_complex


id: GOCC:0009328
description: phenylalanine-tRNA ligase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009328
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0009328_phenylalanine-tRNA_ligase_complex


id: GOCC:0009330
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009330
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0009330_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_complex


id: GOCC:0009331
description: glycerol-3-phosphate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009331
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0009331_glycerol-3-phosphate_dehydrogenase_complex


id: GOCC:0009336
description: Sulfate adenylyltransferase complex (ATP)
memo: https://amigo.geneontology.org/amigo/term/GO:0009336
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0009336_Sulfate_adenylyltransferase_complex_(ATP)


id: GOCC:0009337
description: Sulfite reductase complex (NADPH)
memo: https://amigo.geneontology.org/amigo/term/GO:0009337
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0009337_Sulfite_reductase_complex_(NADPH)


id: GOCC:0009338
description: Exodeoxyribonuclease V complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009338
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0009338_Exodeoxyribonuclease_V_complex


id: GOCC:0009339
description: Glycolate oxidase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009339
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0009339_Glycolate_oxidase_complex


id: GOCC:0009341
description: Beta-galactosidase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009341
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0009341_Beta-galactosidase_complex


id: GOCC:0009345
description: glycine-tRNA ligase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009345
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0009345_glycine-tRNA_ligase_complex


id: GOCC:0009347
description: Aspartate carbamoyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009347
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0009347_Aspartate_carbamoyltransferase_complex


id: GOCC:0009349
description: Riboflavin synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009349
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0009349_Riboflavin_synthase_complex


id: GOCC:0009360
description: DNA polymerase III complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009360
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0009360_DNA_polymerase_III_complex


id: GOCC:0009361
description: succinate-CoA ligase complex (ADP-forming)
memo: https://amigo.geneontology.org/amigo/term/GO:0009361
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0009361_succinate-CoA_ligase_complex_(ADP-forming)


id: GOCC:0009366
description: Enterobactin synthetase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009366
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0009366_Enterobactin_synthetase_complex


id: GOCC:0009368
description: Endopeptidase Clp complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009368
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0009368_Endopeptidase_Clp_complex


id: GOCC:0009376
description: HslUV protease complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009376
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0009376_HslUV_protease_complex


id: GOCC:0009379
description: Holliday junction helicase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009379
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0009379_Holliday_junction_helicase_complex


id: GOCC:0009380
description: Excinuclease repair complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009380
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0009380_Excinuclease_repair_complex


id: GOCC:0009382
description: Imidazoleglycerol-phosphate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009382
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0009382_Imidazoleglycerol-phosphate_synthase_complex


id: GOCC:0009420
description: Bacterial-type flagellum filament
memo: https://amigo.geneontology.org/amigo/term/GO:0009420
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0009420_Bacterial-type_flagellum_filament


id: GOCC:0009421
description: Bacterial-type flagellum filament cap
memo: https://amigo.geneontology.org/amigo/term/GO:0009421
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0009421_Bacterial-type_flagellum_filament_cap


id: GOCC:0009424
description: Bacterial-type flagellum hook
memo: https://amigo.geneontology.org/amigo/term/GO:0009424
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1592317_STRINGid_GOCC:0009424_Bacterial-type_flagellum_hook


