# geneInfo

ensembl_gene_id: VT03_00015
symbol: uppS
gene_biotype: protein_coding
description:
  Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific); Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: VT03_00025
symbol: AMV16242.1
gene_biotype: protein_coding
description:
  CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: VT03_00040
symbol: gatA
gene_biotype: protein_coding
description:
  Glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: VT03_00045
symbol: gatC
gene_biotype: protein_coding
description:
  Glutamyl-tRNA(Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: VT03_00050
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: VT03_00065
symbol: mexA
gene_biotype: protein_coding
description:
  Multidrug resistance protein MexA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: VT03_00070
symbol: bepE_1
gene_biotype: protein_coding
description:
  Efflux pump membrane transporter BepE; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: VT03_00075
symbol: mexB
gene_biotype: protein_coding
description:
  Multidrug resistance protein MexB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: VT03_00080
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: VT03_00090
symbol: cheB
gene_biotype: protein_coding
description:
  Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: VT03_00105
symbol: nqo1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit 1; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.


ensembl_gene_id: VT03_00125
symbol: nqo4_1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit 4; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: VT03_00145
symbol: surE
gene_biotype: protein_coding
description:
  5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: VT03_00165
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: VT03_00235
symbol: trmH
gene_biotype: protein_coding
description:
  tRNA (guanosine(18)-2'-O)-methyltransferase; Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: VT03_00330
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: VT03_00405
symbol: grpE
gene_biotype: protein_coding
description:
  Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- [...]


ensembl_gene_id: VT03_00420
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: VT03_00440
symbol: metX_1
gene_biotype: protein_coding
description:
  Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.


ensembl_gene_id: VT03_00460
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: VT03_00555
symbol: aceE
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: VT03_00650
symbol: proA_1
gene_biotype: protein_coding
description:
  Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: VT03_00655
symbol: AMV16366.1
gene_biotype: protein_coding
description:
  Non-canonical purine NTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: VT03_00670
symbol: lysA_1
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: VT03_01210
symbol: czcA_1
gene_biotype: protein_coding
description:
  Cobalt-zinc-cadmium resistance protein CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: VT03_01410
symbol: ahcY_1
gene_biotype: protein_coding
description:
  Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: VT03_01510
symbol: dusC_1
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase C; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: VT03_01525
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: VT03_01565
symbol: bioK
gene_biotype: protein_coding
description:
  L-Lysine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.


ensembl_gene_id: VT03_01570
symbol: glgC_1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: VT03_01580
symbol: mscL
gene_biotype: protein_coding
description:
  Large-conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: VT03_01645
symbol: argB
gene_biotype: protein_coding
description:
  Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: VT03_01675
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: VT03_01680
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: VT03_01715
symbol: coaX
gene_biotype: protein_coding
description:
  Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: VT03_01965
symbol: purL_1
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase 2; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]


ensembl_gene_id: VT03_02015
symbol: yidC
gene_biotype: protein_coding
description:
  Membrane protein insertase YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: VT03_02045
symbol: prmC
gene_biotype: protein_coding
description:
  Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: VT03_02085
symbol: tatC2
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatCy; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.


ensembl_gene_id: VT03_02100
symbol: hisF_1
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: VT03_02105
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: VT03_02110
symbol: deaD
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase DeaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.


ensembl_gene_id: VT03_02175
symbol: sucB
gene_biotype: protein_coding
description:
  Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: VT03_02210
symbol: uvrC
gene_biotype: protein_coding
description:
  UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: VT03_02235
symbol: folP
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: VT03_02245
symbol: rsmA_1
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: VT03_02250
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: VT03_02270
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: VT03_02275
symbol: ybaB
gene_biotype: protein_coding
description:
  Nucleoid-associated protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: VT03_02280
symbol: dnaX_1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: VT03_02355
symbol: nrdJ
gene_biotype: protein_coding
description:
  Vitamin B12-dependent ribonucleotide reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: VT03_02360
symbol: glyQS
gene_biotype: protein_coding
description:
  Glycine--tRNA ligase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: VT03_02370
symbol: czcB_1
gene_biotype: protein_coding
description:
  Cobalt-zinc-cadmium resistance protein CzcB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: VT03_02390
symbol: nrdA
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase 1 subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: VT03_02400
symbol: nrdB
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.


ensembl_gene_id: VT03_02425
symbol: ribD
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: VT03_02440
symbol: aroB_1
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: VT03_02470
symbol: aroE_1
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: VT03_02555
symbol: mutM_1
gene_biotype: protein_coding
description:
  Formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: VT03_02640
symbol: wbpI
gene_biotype: protein_coding
description:
  UDP-2,3-diacetamido-2,3-dideoxy-D-glucuronate 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: VT03_02690
symbol: gmd_1
gene_biotype: protein_coding
description:
  GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.


ensembl_gene_id: VT03_02730
symbol: wbpA
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-glucosamine 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: VT03_02775
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: VT03_02960
symbol: trpS
gene_biotype: protein_coding
description:
  Tryptophan--tRNA ligase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: VT03_02995
symbol: polA_1
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: VT03_03050
symbol: fdxA_1
gene_biotype: protein_coding
description:
  Ferredoxin-1; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: VT03_03125
symbol: tyrS
gene_biotype: protein_coding
description:
  Tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: VT03_03145
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: VT03_03195
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: VT03_03265
symbol: aceF
gene_biotype: protein_coding
description:
  Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: VT03_03280
symbol: waaA
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonic acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: VT03_03285
symbol: pyrK
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).


ensembl_gene_id: VT03_03325
symbol: mnmE_1
gene_biotype: protein_coding
description:
  tRNA modification GTPase MnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: VT03_03330
symbol: mcsB
gene_biotype: protein_coding
description:
  Putative ATP:guanido phosphotransferase; Catalyzes the specific phosphorylation of arginine residues in proteins; Belongs to the ATP:guanido phosphotransferase family.


ensembl_gene_id: VT03_03360
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: VT03_03430
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: VT03_03445
symbol: yagE
gene_biotype: protein_coding
description:
  Putative 2-keto-3-deoxy-galactonate aldolase YagE; Catalyzes the reversible aldol cleavage of N-acetylneuraminic acid (sialic acid; Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate. Belongs to the DapA family.


ensembl_gene_id: VT03_03460
symbol: AMV16921.1
gene_biotype: protein_coding
description:
  Thermostable carboxypeptidase 1; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.


ensembl_gene_id: VT03_03515
symbol: ybaL_1
gene_biotype: protein_coding
description:
  Inner membrane protein YbaL; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: VT03_03570
symbol: arsC1_1
gene_biotype: protein_coding
description:
  Arsenate-mycothiol transferase ArsC1; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: VT03_03875
symbol: lspA
gene_biotype: protein_coding
description:
  Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: VT03_03915
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: VT03_03920
symbol: fabF_1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase 2; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: VT03_03980
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: VT03_03995
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: VT03_04015
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: VT03_04020
symbol: pyrC_2
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: VT03_04055
symbol: pheT
gene_biotype: protein_coding
description:
  Phenylalanine--tRNA ligase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: VT03_04085
symbol: serC
gene_biotype: protein_coding
description:
  Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.


ensembl_gene_id: VT03_04160
symbol: hisA_1
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Belongs to the HisA/HisF family.


ensembl_gene_id: VT03_04210
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: VT03_04215
symbol: lipB
gene_biotype: protein_coding
description:
  Octanoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: VT03_04230
symbol: xerD_1
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: VT03_04245
symbol: ubiX
gene_biotype: protein_coding
description:
  Putative aromatic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: VT03_04255
symbol: ribBA
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family.  In the N-terminal section; belongs to the DHBP synthase family.


ensembl_gene_id: VT03_04270
symbol: nusB
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: VT03_04280
symbol: AMV17084.1
gene_biotype: protein_coding
description:
  Multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase.


ensembl_gene_id: VT03_04295
symbol: clpP_1
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: VT03_04325
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: VT03_04375
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: VT03_04385
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: VT03_04470
symbol: nrdR_2
gene_biotype: protein_coding
description:
  Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: VT03_04495
symbol: hpt
gene_biotype: protein_coding
description:
  Hypoxanthine-guanine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: VT03_04505
symbol: trmB_1
gene_biotype: protein_coding
description:
  tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: VT03_04580
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: VT03_04605
symbol: coaE
gene_biotype: protein_coding
description:
  Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: VT03_04615
symbol: csd_1
gene_biotype: protein_coding
description:
  Putative cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.


ensembl_gene_id: VT03_04625
symbol: pglJ_1
gene_biotype: protein_coding
description:
  N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase.


ensembl_gene_id: VT03_04670
symbol: csrA_1
gene_biotype: protein_coding
description:
  Carbon storage regulator; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.


ensembl_gene_id: VT03_04730
symbol: lpxK
gene_biotype: protein_coding
description:
  Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: VT03_04760
symbol: icfA_1
gene_biotype: protein_coding
description:
  Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.


ensembl_gene_id: VT03_04810
symbol: folD
gene_biotype: protein_coding
description:
  Bifunctional protein FolD protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: VT03_04840
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: VT03_04850
symbol: mtnA
gene_biotype: protein_coding
description:
  Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: VT03_04855
symbol: uvrA_2
gene_biotype: protein_coding
description:
  UvrABC system protein A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: VT03_04860
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA-specific 2-thiouridylase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: VT03_04865
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily.


ensembl_gene_id: VT03_04900
symbol: lpxB
gene_biotype: protein_coding
description:
  Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: VT03_04925
symbol: pfp_1
gene_biotype: protein_coding
description:
  Pyrophosphate--fructose 6-phosphate 1-phosphotransferase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.


ensembl_gene_id: VT03_04940
symbol: AMV17215.1
gene_biotype: protein_coding
description:
  Putative tRNA (cytidine(34)-2'-O)-methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.


ensembl_gene_id: VT03_04950
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-acylglucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: VT03_05020
symbol: clpB1
gene_biotype: protein_coding
description:
  Chaperone protein ClpB 1; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: VT03_05135
symbol: fmt
gene_biotype: protein_coding
description:
  Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: VT03_05150
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: VT03_05300
symbol: AMV17286.1
gene_biotype: protein_coding
description:
  Putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: VT03_05500
symbol: nuoC1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit C 1; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: VT03_05505
symbol: ndhC_1
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase subunit 3; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: VT03_05630
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: VT03_05660
symbol: dnaC_1
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: VT03_05735
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease 7 large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: VT03_05740
symbol: dnaE2_1
gene_biotype: protein_coding
description:
  Error-prone DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.


ensembl_gene_id: VT03_06160
symbol: apbE_1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis lipoprotein ApbE precursor; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: VT03_06260
symbol: AMV17475.1
gene_biotype: protein_coding
description:
  2',5' RNA ligase family; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: VT03_06300
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: VT03_06445
symbol: groS5
gene_biotype: protein_coding
description:
  10 kDa chaperonin 5; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter; Belongs to the GroES chaperonin family.


ensembl_gene_id: VT03_06510
symbol: mdtA_1
gene_biotype: protein_coding
description:
  Multidrug resistance protein MdtA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: VT03_06515
symbol: mdtB_1
gene_biotype: protein_coding
description:
  Multidrug resistance protein MdtB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: VT03_06525
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: VT03_06590
symbol: dapA_1
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the reversible aldol cleavage of N-acetylneuraminic acid (sialic acid; Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate. Belongs to the DapA family.


ensembl_gene_id: VT03_06625
symbol: murAA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: VT03_06670
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: VT03_06700
symbol: rbsC_1
gene_biotype: protein_coding
description:
  Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: VT03_06735
symbol: nuoN_1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: VT03_06750
symbol: nuoK_1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: VT03_06755
symbol: nuoJ_1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: VT03_06760
symbol: nuoI_2
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: VT03_06765
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: VT03_06880
symbol: lepA
gene_biotype: protein_coding
description:
  Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: VT03_06890
symbol: gltX
gene_biotype: protein_coding
description:
  Glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: VT03_06900
symbol: selO
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.


ensembl_gene_id: VT03_06940
symbol: rsgA
gene_biotype: protein_coding
description:
  Putative ribosome biogenesis GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: VT03_06955
symbol: thiC
gene_biotype: protein_coding
description:
  Phosphomethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.


ensembl_gene_id: VT03_06970
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: VT03_07090
symbol: macB_4
gene_biotype: protein_coding
description:
  Macrolide export ATP-binding/permease protein MacB; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.


ensembl_gene_id: VT03_07180
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: VT03_07185
symbol: purE
gene_biotype: protein_coding
description:
  N5-carboxyaminoimidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: VT03_07190
symbol: purK
gene_biotype: protein_coding
description:
  N5-carboxyaminoimidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: VT03_07240
symbol: epsN
gene_biotype: protein_coding
description:
  Putative pyridoxal phosphate-dependent aminotransferase EpsN; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: VT03_07260
symbol: pyrDB
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate.


ensembl_gene_id: VT03_07265
symbol: ftsH_2
gene_biotype: protein_coding
description:
  ATP-dependent zinc metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: VT03_07290
symbol: troA
gene_biotype: protein_coding
description:
  Periplasmic zinc-binding protein TroA precursor; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: VT03_07310
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: VT03_07330
symbol: rlmN_1
gene_biotype: protein_coding
description:
  Putative dual-specificity RNA methyltransferase RlmN; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: VT03_07510
symbol: hemA
gene_biotype: protein_coding
description:
  Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: VT03_07525
symbol: hemC
gene_biotype: protein_coding
description:
  Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.


ensembl_gene_id: VT03_07530
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: VT03_07545
symbol: dapB
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: VT03_07550
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.


ensembl_gene_id: VT03_07595
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: VT03_07690
symbol: rplU
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: VT03_07700
symbol: ptsI
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: VT03_07770
symbol: ywlC
gene_biotype: protein_coding
description:
  Threonylcarbamoyl-AMP synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: VT03_07780
symbol: panC
gene_biotype: protein_coding
description:
  Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: VT03_07785
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: VT03_07965
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate synthase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: VT03_08025
symbol: queE
gene_biotype: protein_coding
description:
  7-carboxy-7-deazaguanine synthase; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: VT03_08075
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: VT03_08105
symbol: gndA
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.


ensembl_gene_id: VT03_08115
symbol: ybeY
gene_biotype: protein_coding
description:
  Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: VT03_08130
symbol: uvrB
gene_biotype: protein_coding
description:
  UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...]


ensembl_gene_id: VT03_08155
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase epsilon chain, sodium ion specific; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: VT03_08380
symbol: folX
gene_biotype: protein_coding
description:
  D-erythro-7,8-dihydroneopterin triphosphate epimerase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: VT03_08400
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: VT03_08410
symbol: rplL
gene_biotype: protein_coding
description:
  50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: VT03_08415
symbol: rplJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: VT03_08420
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: VT03_08425
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: VT03_08435
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family.


ensembl_gene_id: VT03_08450
symbol: tuf_1
gene_biotype: protein_coding
description:
  Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: VT03_08550
symbol: rpoA_1
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: VT03_08555
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: VT03_08560
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: VT03_08585
symbol: pth
gene_biotype: protein_coding
description:
  Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: VT03_08590
symbol: ctc
gene_biotype: protein_coding
description:
  General stress protein CTC; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: VT03_08595
symbol: rpsL
gene_biotype: protein_coding
description:
  30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: VT03_08600
symbol: rpsG
gene_biotype: protein_coding
description:
  30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: VT03_08620
symbol: ahpD_1
gene_biotype: protein_coding
description:
  Alkyl hydroperoxide reductase AhpD; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: VT03_08640
symbol: gltX1
gene_biotype: protein_coding
description:
  Glutamate--tRNA ligase 1; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily.


ensembl_gene_id: VT03_08645
symbol: glgC_2
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: VT03_08730
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: VT03_08745
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: VT03_08775
symbol: lpxA_1
gene_biotype: protein_coding
description:
  Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: VT03_08780
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis. Belongs to the LpxC family.


ensembl_gene_id: VT03_08790
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: VT03_08975
symbol: AMV18009.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: VT03_08980
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: VT03_09005
symbol: glgB_1
gene_biotype: protein_coding
description:
  1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: VT03_09065
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.


ensembl_gene_id: VT03_09130
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: VT03_09175
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: VT03_09195
symbol: nnr_1
gene_biotype: protein_coding
description:
  Bifunctional NAD(P)H-hydrate repair enzyme Nnr; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S-and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.


ensembl_gene_id: VT03_09215
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: VT03_09225
symbol: ppiA
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase A precursor; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: VT03_09300
symbol: queF
gene_biotype: protein_coding
description:
  NADPH-dependent 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.


ensembl_gene_id: VT03_09325
symbol: metF
gene_biotype: protein_coding
description:
  5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: VT03_09365
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: VT03_09380
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: VT03_09480
symbol: thrS
gene_biotype: protein_coding
description:
  Threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: VT03_09525
symbol: dnaJ_1
gene_biotype: protein_coding
description:
  Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]


ensembl_gene_id: VT03_09530
symbol: ylxH
gene_biotype: protein_coding
description:
  Flagellum site-determining protein YlxH; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: VT03_09565
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: VT03_09600
symbol: pdg
gene_biotype: protein_coding
description:
  Ultraviolet N-glycosylase/AP lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: VT03_10435
symbol: torS
gene_biotype: protein_coding
description:
  Sensor protein TorS; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: VT03_10460
symbol: glgP_1
gene_biotype: protein_coding
description:
  Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: VT03_10485
symbol: ldh_1
gene_biotype: protein_coding
description:
  L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.


ensembl_gene_id: VT03_10510
symbol: bepF_1
gene_biotype: protein_coding
description:
  Efflux pump periplasmic linker BepF; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: VT03_10515
symbol: acrB
gene_biotype: protein_coding
description:
  Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: VT03_10830
symbol: ftsH4_1
gene_biotype: protein_coding
description:
  ATP-dependent zinc metalloprotease FtsH 4; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: VT03_10875
symbol: wbpE
gene_biotype: protein_coding
description:
  UDP-2-acetamido-2-deoxy-3-oxo-D-glucuronate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: VT03_11090
symbol: otsB
gene_biotype: protein_coding
description:
  Trehalose-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.


ensembl_gene_id: VT03_11210
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated endoribonuclease Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: VT03_11220
symbol: cas9_1
gene_biotype: protein_coding
description:
  CRISPR-associated endonuclease Cas9; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans- encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this pro [...]


ensembl_gene_id: VT03_11260
symbol: dctA_1
gene_biotype: protein_coding
description:
  Aerobic C4-dicarboxylate transport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: VT03_11305
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: VT03_11420
symbol: dus
gene_biotype: protein_coding
description:
  Putative tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: VT03_11425
symbol: murJ_3
gene_biotype: protein_coding
description:
  Putative peptidoglycan biosynthesis protein MurJ; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: VT03_11465
symbol: obgE
gene_biotype: protein_coding
description:
  GTPase ObgE/CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: VT03_11475
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: VT03_11480
symbol: sigA_1
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor SigA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: VT03_11485
symbol: rsmE
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: VT03_11515
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: VT03_11520
symbol: rsmB
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase B; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: VT03_11675
symbol: cysW_1
gene_biotype: protein_coding
description:
  Sulfate transport system permease protein CysW; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: VT03_11715
symbol: rsmH_1
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: VT03_11820
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: VT03_11865
symbol: dapA_2
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: VT03_11890
symbol: tpx
gene_biotype: protein_coding
description:
  Putative thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.


ensembl_gene_id: VT03_11900
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: VT03_11920
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: VT03_12070
symbol: AMV18623.1
gene_biotype: protein_coding
description:
  Ferredoxin 1; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: VT03_12105
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: VT03_12140
symbol: cls
gene_biotype: protein_coding
description:
  Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.


ensembl_gene_id: VT03_12220
symbol: fabG_7
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase FabG; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: VT03_12400
symbol: caaA_1
gene_biotype: protein_coding
description:
  Cytochrome c oxidase polypeptide I+III; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.


ensembl_gene_id: VT03_12405
symbol: ctaC_1
gene_biotype: protein_coding
description:
  Cytochrome c oxidase subunit 2 precursor; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).


ensembl_gene_id: VT03_12495
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: VT03_12535
symbol: serS
gene_biotype: protein_coding
description:
  Serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: VT03_12590
symbol: thyX
gene_biotype: protein_coding
description:
  Thymidylate synthase ThyX; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: VT03_12650
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: VT03_12695
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: VT03_12705
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: VT03_12745
symbol: dnaN
gene_biotype: protein_coding
description:
  DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of  [...]


ensembl_gene_id: VT03_12755
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: VT03_12825
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.


ensembl_gene_id: VT03_12830
symbol: pcm_1
gene_biotype: protein_coding
description:
  Protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.


ensembl_gene_id: VT03_12915
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: VT03_13090
symbol: ppnK
gene_biotype: protein_coding
description:
  Putative inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: VT03_13120
symbol: AMV18824.1
gene_biotype: protein_coding
description:
  Putative membrane protein insertion efficiency factor; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: VT03_13125
symbol: glnD
gene_biotype: protein_coding
description:
  Bifunctional uridylyltransferase/uridylyl-removing enzyme; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.


ensembl_gene_id: VT03_13250
symbol: accC
gene_biotype: protein_coding
description:
  Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: VT03_13255
symbol: accB
gene_biotype: protein_coding
description:
  Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: VT03_13260
symbol: rho
gene_biotype: protein_coding
description:
  Hypothetical protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: VT03_13285
symbol: narB_2
gene_biotype: protein_coding
description:
  Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.


ensembl_gene_id: VT03_13665
symbol: yrrK
gene_biotype: protein_coding
description:
  Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: VT03_13825
symbol: pstB3
gene_biotype: protein_coding
description:
  Phosphate import ATP-binding protein PstB 3; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: VT03_13835
symbol: pstC
gene_biotype: protein_coding
description:
  Phosphate transport system permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: VT03_13910
symbol: glnE
gene_biotype: protein_coding
description:
  Glutamate-ammonia-ligase adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transd [...]


ensembl_gene_id: VT03_14025
symbol: csrA
gene_biotype: protein_coding
description:
  Hypothetical protein; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.


ensembl_gene_id: VT03_14110
symbol: msrA2
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase MsrA 2; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: VT03_14200
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase precursor; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: VT03_14320
symbol: acrE_1
gene_biotype: protein_coding
description:
  Multidrug export protein AcrE precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: VT03_14325
symbol: acrF
gene_biotype: protein_coding
description:
  Multidrug export protein AcrF; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: VT03_14355
symbol: rmlD
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.


ensembl_gene_id: VT03_14365
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: VT03_14430
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: VT03_15230
symbol: glgE2
gene_biotype: protein_coding
description:
  Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase 2; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.


ensembl_gene_id: VT03_15430
symbol: AMV19282.1
gene_biotype: protein_coding
description:
  Carboxymuconolactone decarboxylase family protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: VT03_15465
symbol: acsA_2
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: VT03_15640
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: VT03_15645
symbol: ruvC
gene_biotype: protein_coding
description:
  Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: VT03_15765
symbol: ruvB_2
gene_biotype: protein_coding
description:
  Holliday junction ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: VT03_15785
symbol: glmS
gene_biotype: protein_coding
description:
  Glutamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: VT03_15810
symbol: valS
gene_biotype: protein_coding
description:
  Valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: VT03_15890
symbol: nnr_2
gene_biotype: protein_coding
description:
  Bifunctional NAD(P)H-hydrate repair enzyme Nnr; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.


ensembl_gene_id: VT03_15925
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: VT03_15930
symbol: AMV19382.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: VT03_16105
symbol: tkt
gene_biotype: protein_coding
description:
  Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.


ensembl_gene_id: VT03_16110
symbol: mqnA
gene_biotype: protein_coding
description:
  Chorismate dehydratase; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: VT03_16150
symbol: prpB
gene_biotype: protein_coding
description:
  Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.


ensembl_gene_id: VT03_16240
symbol: mnmE_2
gene_biotype: protein_coding
description:
  tRNA modification GTPase MnmE; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: VT03_16255
symbol: kdpA
gene_biotype: protein_coding
description:
  Potassium-transporting ATPase A chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane.


ensembl_gene_id: VT03_16260
symbol: kdpB
gene_biotype: protein_coding
description:
  Potassium-transporting ATPase B chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily.


ensembl_gene_id: VT03_16265
symbol: kdpC
gene_biotype: protein_coding
description:
  Potassium-transporting ATPase C chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex.


ensembl_gene_id: VT03_16295
symbol: pcp
gene_biotype: protein_coding
description:
  Pyrrolidone-carboxylate peptidase; Removes 5-oxoproline from various penultimate amino acid residues except L-proline.


ensembl_gene_id: VT03_16405
symbol: sucD_1
gene_biotype: protein_coding
description:
  Succinyl-CoA ligase [ADP-forming] subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: VT03_16410
symbol: sucC
gene_biotype: protein_coding
description:
  Succinyl-CoA ligase [ADP-forming] subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: VT03_16485
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: VT03_16505
symbol: nfo
gene_biotype: protein_coding
description:
  Endonuclease 4; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.


ensembl_gene_id: VT03_16765
symbol: plsY
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: VT03_16945
symbol: ykoV_1
gene_biotype: protein_coding
description:
  Putative DNA repair protein YkoV; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.


ensembl_gene_id: VT03_17290
symbol: punA_1
gene_biotype: protein_coding
description:
  Purine nucleoside phosphorylase 1; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: VT03_17355
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.


ensembl_gene_id: VT03_17420
symbol: serA_1
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: VT03_17480
symbol: scpA_2
gene_biotype: protein_coding
description:
  Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: VT03_17690
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: VT03_17740
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: VT03_17805
symbol: moaA_2
gene_biotype: protein_coding
description:
  Cyclic pyranopterin monophosphate synthase; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: VT03_17825
symbol: livH_1
gene_biotype: protein_coding
description:
  High-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: VT03_17895
symbol: cfiB
gene_biotype: protein_coding
description:
  2-oxoglutarate carboxylase small subunit; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.


ensembl_gene_id: VT03_17925
symbol: smc_6
gene_biotype: protein_coding
description:
  Chromosome partition protein Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: VT03_17930
symbol: flgI_1
gene_biotype: protein_coding
description:
  Flagellar P-ring protein precursor; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: VT03_17960
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: VT03_18070
symbol: nhaA
gene_biotype: protein_coding
description:
  Na(+)/H(+) antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.


ensembl_gene_id: VT03_18090
symbol: tdh
gene_biotype: protein_coding
description:
  L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family.


ensembl_gene_id: VT03_18140
symbol: hisH1_1
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisH 1; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: VT03_18440
symbol: dctA_2
gene_biotype: protein_coding
description:
  C4-dicarboxylate transport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: VT03_18495
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair-coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: VT03_18535
symbol: clsA
gene_biotype: protein_coding
description:
  Major cardiolipin synthase ClsA; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.


ensembl_gene_id: VT03_18595
symbol: argD_1
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: VT03_18645
symbol: ada
gene_biotype: protein_coding
description:
  Bifunctional transcriptional activator/DNA repair enzyme Ada; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. Belongs to the MGMT family.


ensembl_gene_id: VT03_18745
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: VT03_18780
symbol: dnaA_2
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: VT03_18875
symbol: secA-2
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: VT03_19120
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: VT03_19290
symbol: def1
gene_biotype: protein_coding
description:
  Peptide deformylase 1; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: VT03_19325
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: VT03_19350
symbol: recA
gene_biotype: protein_coding
description:
  Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: VT03_19515
symbol: fusA_2
gene_biotype: protein_coding
description:
  Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: VT03_19670
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: VT03_19845
symbol: mdtC_1
gene_biotype: protein_coding
description:
  Multidrug resistance protein MdtC; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: VT03_20100
symbol: rluD_1
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: VT03_20180
symbol: aspS
gene_biotype: protein_coding
description:
  Aspartate--tRNA ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: VT03_20285
symbol: rlmN_2
gene_biotype: protein_coding
description:
  Putative dual-specificity RNA methyltransferase RlmN; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: VT03_20360
symbol: AMV20262.1
gene_biotype: protein_coding
description:
  Putative cation efflux system protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: VT03_20410
symbol: feoB
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: VT03_20415
symbol: rluB
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: VT03_20590
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: VT03_20595
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: VT03_20625
symbol: rtcA
gene_biotype: protein_coding
description:
  RNA 3'-terminal phosphate cyclase; Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3'P to produce RNA-N3'PP5'A; (C) and attack of the adjacent 2'-hydroxyl on the 3'-phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing.


ensembl_gene_id: VT03_20750
symbol: ackA_1
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: VT03_20900
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: VT03_20910
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: VT03_20915
symbol: rlmB_2
gene_biotype: protein_coding
description:
  23S rRNA (guanosine-2'-O-)-methyltransferase RlmB; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: VT03_21695
symbol: mobA
gene_biotype: protein_coding
description:
  Molybdenum cofactor guanylyltransferase; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.


ensembl_gene_id: VT03_22695
symbol: ogt_1
gene_biotype: protein_coding
description:
  Methylated-DNA--protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: VT03_22725
symbol: fabG_10
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase FabG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: VT03_23365
symbol: ttgG
gene_biotype: protein_coding
description:
  Toluene efflux pump periplasmic linker protein TtgG precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: VT03_23380
symbol: kat
gene_biotype: protein_coding
description:
  3-aminobutyryl-CoA aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: VT03_23675
symbol: ychF
gene_biotype: protein_coding
description:
  Ribosome-binding ATPase YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: VT03_24240
symbol: bioD1
gene_biotype: protein_coding
description:
  ATP-dependent dethiobiotin synthetase BioD 1; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: VT03_24275
symbol: fdtB
gene_biotype: protein_coding
description:
  dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose transaminase; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: VT03_24290
symbol: deoC2
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase 2; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: VT03_24450
symbol: rmlC
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: VT03_24560
symbol: AMV21098.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: VT03_24570
symbol: hisI
gene_biotype: protein_coding
description:
  phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.


ensembl_gene_id: VT03_24645
symbol: metG
gene_biotype: protein_coding
description:
  Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: VT03_24695
symbol: nadE
gene_biotype: protein_coding
description:
  Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: VT03_24705
symbol: nqo5
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit 5; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: VT03_24710
symbol: nqo6_1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit 6; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: VT03_24730
symbol: bfr
gene_biotype: protein_coding
description:
  Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.


ensembl_gene_id: VT03_24840
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: VT03_24860
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: VT03_24950
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: VT03_24955
symbol: moeA
gene_biotype: protein_coding
description:
  Molybdopterin molybdenumtransferase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: VT03_25050
symbol: fhcD_1
gene_biotype: protein_coding
description:
  Formyltransferase/hydrolase complex subunit D; Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT); Belongs to the FTR family.


ensembl_gene_id: VT03_25280
symbol: lexA
gene_biotype: protein_coding
description:
  LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: VT03_25295
symbol: map_1
gene_biotype: protein_coding
description:
  Methionine aminopeptidase 1; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: VT03_25300
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: VT03_25305
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: VT03_25310
symbol: rpsE
gene_biotype: protein_coding
description:
  30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: VT03_25315
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: VT03_25320
symbol: rplF
gene_biotype: protein_coding
description:
  50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: VT03_25325
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: VT03_25330
symbol: rpsN1
gene_biotype: protein_coding
description:
  30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.


ensembl_gene_id: VT03_25335
symbol: rplE
gene_biotype: protein_coding
description:
  50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: VT03_25340
symbol: rplX
gene_biotype: protein_coding
description:
  50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: VT03_25345
symbol: rplN
gene_biotype: protein_coding
description:
  50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: VT03_25350
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: VT03_25360
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: VT03_25365
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: VT03_25370
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: VT03_25375
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: VT03_25380
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: VT03_25385
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: VT03_25395
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: VT03_25400
symbol: rpsJ
gene_biotype: protein_coding
description:
  30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: VT03_25505
symbol: acpS
gene_biotype: protein_coding
description:
  Holo-[acyl-carrier-protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: VT03_25535
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: VT03_25570
symbol: acn
gene_biotype: protein_coding
description:
  Aconitate hydratase precursor; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.


ensembl_gene_id: VT03_25575
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: VT03_25580
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: VT03_25585
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: VT03_25590
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: VT03_25595
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: VT03_25605
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: VT03_25620
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: VT03_25735
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: VT03_25740
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: VT03_25775
symbol: mqnD
gene_biotype: protein_coding
description:
  1,4-dihydroxy-6-naphtoate synthase; Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2); Belongs to the MqnA/MqnD family. MqnD subfamily.


ensembl_gene_id: VT03_25790
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: VT03_25805
symbol: hflX
gene_biotype: protein_coding
description:
  GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: VT03_25860
symbol: pepT
gene_biotype: protein_coding
description:
  Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.


ensembl_gene_id: VT03_25865
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: VT03_25905
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: VT03_25920
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: VT03_25950
symbol: AMV21372.1
gene_biotype: protein_coding
description:
  Putative 2-hydroxyacid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: VT03_25985
symbol: pgsA
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: VT03_26105
symbol: dapL
gene_biotype: protein_coding
description:
  LL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. LL-diaminopimelate aminotransferase subfamily.


ensembl_gene_id: VT03_26455
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: VT03_26505
symbol: hemY
gene_biotype: protein_coding
description:
  Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.


ensembl_gene_id: VT03_26575
symbol: tsf
gene_biotype: protein_coding
description:
  Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: VT03_26820
symbol: moaC
gene_biotype: protein_coding
description:
  Cyclic pyranopterin monophosphate synthase accessory protein; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: VT03_26835
symbol: map_2
gene_biotype: protein_coding
description:
  Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: VT03_26850
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase component 1; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...]


ensembl_gene_id: VT03_26925
symbol: fliF
gene_biotype: protein_coding
description:
  Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: VT03_26940
symbol: flgB
gene_biotype: protein_coding
description:
  Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: VT03_26990
symbol: flgH
gene_biotype: protein_coding
description:
  Flagellar L-ring protein precursor; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: VT03_27025
symbol: AMV21586.1
gene_biotype: protein_coding
description:
  Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: VT03_27035
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP precursor; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: VT03_27215
symbol: panD
gene_biotype: protein_coding
description:
  Aspartate 1-decarboxylase precursor; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: VT03_27295
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: VT03_27300
symbol: tsaD
gene_biotype: protein_coding
description:
  tRNA N6-adenosine threonylcarbamoyltransferase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: VT03_27325
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: VT03_27365
symbol: alaS
gene_biotype: protein_coding
description:
  Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: VT03_27370
symbol: pheS
gene_biotype: protein_coding
description:
  Phenylalanine--tRNA ligase alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: VT03_27385
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: VT03_27390
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: VT03_27535
symbol: der
gene_biotype: protein_coding
description:
  GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: VT03_27625
symbol: fabH_4
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase 3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: VT03_27710
symbol: kbl
gene_biotype: protein_coding
description:
  2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.


ensembl_gene_id: VT03_27715
symbol: nqo8
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit 8; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: VT03_27750
symbol: hisA_2
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.


ensembl_gene_id: VT03_27775
symbol: accA
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: VT03_28220
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--LD- lysine ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: VT03_28225
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: VT03_28230
symbol: mraY
gene_biotype: protein_coding
description:
  Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: VT03_28385
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: VT03_28405
symbol: AMV21857.1
gene_biotype: protein_coding
description:
  Cob(I)yrinic acid a,c-diamide adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.


ensembl_gene_id: VT03_28435
symbol: hppA
gene_biotype: protein_coding
description:
  K(+)-insensitive pyrophosphate-energized proton pump; Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force.


ensembl_gene_id: VT03_28440
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: VT03_28480
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: VT03_28510
symbol: proS
gene_biotype: protein_coding
description:
  Proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacy [...]


ensembl_gene_id: VT03_28625
symbol: panB_2
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: VT03_28665
symbol: cfr
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase Cfr; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: VT03_28760
symbol: AMV21928.1
gene_biotype: protein_coding
description:
  Putative TrmH family tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: VT03_28800
symbol: mqnE_1
gene_biotype: protein_coding
description:
  Aminodeoxyfutalosine synthase; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate.


ensembl_gene_id: VT03_28805
symbol: gcvPA
gene_biotype: protein_coding
description:
  Putative glycine dehydrogenase (decarboxylating) subunit 1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.


ensembl_gene_id: VT03_28810
symbol: gcvH_2
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: VT03_28860
symbol: ubiE_5
gene_biotype: protein_coding
description:
  Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).


ensembl_gene_id: VT03_28900
symbol: ctaB
gene_biotype: protein_coding
description:
  Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.


ensembl_gene_id: VT03_28915
symbol: coxM
gene_biotype: protein_coding
description:
  Alternative cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).


ensembl_gene_id: VT03_28960
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: VT03_28970
symbol: mch
gene_biotype: protein_coding
description:
  Methenyltetrahydromethanopterin cyclohydrolase; Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl- H(4)MPT; Belongs to the MCH family.


ensembl_gene_id: VT03_29055
symbol: strE_2
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: VT03_29080
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: VT03_29180
symbol: mqnE_2
gene_biotype: protein_coding
description:
  Aminodeoxyfutalosine synthase; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: VT03_29185
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: VT03_29190
symbol: hemN_2
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen-III oxidase 1; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: VT03_29230
symbol: groS_1
gene_biotype: protein_coding
description:
  10 kDa chaperonin; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: VT03_29235
symbol: groL_1
gene_biotype: protein_coding
description:
  60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: VT03_29305
symbol: dcd
gene_biotype: protein_coding
description:
  Deoxycytidine triphosphate deaminase; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate.


ensembl_gene_id: VT03_29320
symbol: ilvE
gene_biotype: protein_coding
description:
  Branched-chain-amino-acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: VT03_29325
symbol: lolD_6
gene_biotype: protein_coding
description:
  Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.


ensembl_gene_id: VT03_29375
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: VT03_29470
symbol: cysT
gene_biotype: protein_coding
description:
  Sulfate transport system permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import.


ensembl_gene_id: VT03_29480
symbol: cysA
gene_biotype: protein_coding
description:
  Sulfate/thiosulfate import ATP-binding protein CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.


ensembl_gene_id: VT03_29510
symbol: sufS
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.


ensembl_gene_id: VT03_29545
symbol: pepA
gene_biotype: protein_coding
description:
  Cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: VT03_29555
symbol: queC
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.


ensembl_gene_id: VT03_29560
symbol: rmlA
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: VT03_29695
symbol: groL5
gene_biotype: protein_coding
description:
  60 kDa chaperonin 5; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: VT03_29795
symbol: fabF_6
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: VT03_29865
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: VT03_29870
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: VT03_29900
symbol: aroE_3
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA); Belongs to the type-I 3-dehydroquinase family.


ensembl_gene_id: VT03_29905
symbol: bpt
gene_biotype: protein_coding
description:
  arginyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.


ensembl_gene_id: VT03_29910
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: VT03_29920
symbol: AMV22159.1
gene_biotype: protein_coding
description:
  5-formyltetrahydrofolate cyclo-ligase family protein; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.


ensembl_gene_id: VT03_29975
symbol: argD_2
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: VT03_30015
symbol: AMV22178.1
gene_biotype: protein_coding
description:
  Leucine carboxyl methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.


ensembl_gene_id: VT03_30020
symbol: gapA
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase 1; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: VT03_30035
symbol: accD
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: VT03_30050
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.


ensembl_gene_id: VT03_30135
symbol: fliA_2
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: VT03_30210
symbol: pduL
gene_biotype: protein_coding
description:
  Phosphate propanoyltransferase; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.


ensembl_gene_id: VT03_30300
symbol: secD
gene_biotype: protein_coding
description:
  Bifunctional preprotein translocase subunit SecD/SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.


ensembl_gene_id: VT03_30440
symbol: miaB
gene_biotype: protein_coding
description:
  (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: VT03_30460
symbol: argJ
gene_biotype: protein_coding
description:
  Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: VT03_30685
symbol: leuA_3
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: VT03_31050
symbol: yedK
gene_biotype: protein_coding
description:
  Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family.


ensembl_gene_id: VT03_31240
symbol: tmoS_2
gene_biotype: protein_coding
description:
  Sensor histidine kinase TmoS; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: VT03_31315
symbol: ilvA
gene_biotype: protein_coding
description:
  L-threonine dehydratase biosynthetic IlvA; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: VT03_32325
symbol: cusB
gene_biotype: protein_coding
description:
  Cation efflux system protein CusB precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: VT03_32530
symbol: sigA_4
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor SigA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: VT03_32555
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: VT03_32575
symbol: AMV22675.1
gene_biotype: protein_coding
description:
  RmlD substrate binding domain protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.


ensembl_gene_id: VT03_32600
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: VT03_32605
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: VT03_32655
symbol: gatB
gene_biotype: protein_coding
description:
  Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: VT03_32700
symbol: bioF
gene_biotype: protein_coding
description:
  8-amino-7-oxononanoate synthase 2; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.


ensembl_gene_id: VT03_32760
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: VT03_32875
symbol: sodA
gene_biotype: protein_coding
description:
  Mn Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: VT03_32925
symbol: AMV22745.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: VT03_32940
symbol: yacG
gene_biotype: protein_coding
description:
  Zinc-binding protein; Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C- terminal domain of GyrB, which probably disrupts DNA binding by the gyrase.


ensembl_gene_id: VT03_32960
symbol: fliD
gene_biotype: protein_coding
description:
  Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: VT03_32965
symbol: fliC
gene_biotype: protein_coding
description:
  Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


# pathwayInfo

id: CL:1006
description: RNA polymerase sigma-70, and DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1006_RNA_polymerase_sigma-70,_and_DNA_helicase_DnaB,_N-terminal/DNA_primase_DnaG,_C-terminal


id: CL:10061
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10061_Mixed,_incl._Peptidase_S26A,_signal_peptidase_I,_conserved_site,_and_RNA_polymerase_sigma_factor_70,_ECF,_conserved_site

description:
  Mixed, incl. Peptidase S26A, signal peptidase I, conserved site, and RNA polymerase sigma factor 70, ECF, conserved site


id: CL:10070
description: Mixed, incl. DUS-like, FMN-binding domain, and Anti-sigma factor, zinc-finger domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10070_Mixed,_incl._DUS-like,_FMN-binding_domain,_and_Anti-sigma_factor,_zinc-finger_domain_superfamily


id: CL:1008
description: DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal, and Sigma-70 factor, region 1.2
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1008_DNA_helicase_DnaB,_N-terminal/DNA_primase_DnaG,_C-terminal,_and_Sigma-70_factor,_region_1.2


id: CL:10088
description: Mixed, incl. Domain of unknown function DUF11, and Lipoprotein localization to membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10088_Mixed,_incl._Domain_of_unknown_function_DUF11,_and_Lipoprotein_localization_to_membrane


id: CL:10104
description: Mostly uncharacterized, incl. Parallel beta-helix repeats, and Cellulase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10104_Mostly_uncharacterized,_incl._Parallel_beta-helix_repeats,_and_Cellulase_activity


id: CL:10106
description: Mixed, incl. Parallel beta-helix repeats, and Cellulase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10106_Mixed,_incl._Parallel_beta-helix_repeats,_and_Cellulase_activity


id: CL:10108
description: Mixed, incl. Cellulase activity, and Domain of unknown function DUF255
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10108_Mixed,_incl._Cellulase_activity,_and_Domain_of_unknown_function_DUF255


id: CL:10110
description: Mixed, incl. Cellulase activity, and Domain of unknown function DUF255
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10110_Mixed,_incl._Cellulase_activity,_and_Domain_of_unknown_function_DUF255


id: CL:10113
description: Cellulase activity, and Domain of unknown function DUF255
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10113_Cellulase_activity,_and_Domain_of_unknown_function_DUF255


id: CL:10168
description: Mixed, incl. NfeD-like C-terminal, partner-binding, and Membrane raft
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10168_Mixed,_incl._NfeD-like_C-terminal,_partner-binding,_and_Membrane_raft


id: CL:10172
description: NfeD-like C-terminal, partner-binding, and Membrane raft
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10172_NfeD-like_C-terminal,_partner-binding,_and_Membrane_raft


id: CL:10190
description: Mixed, incl. ParB/Sulfiredoxin, and Pfam phage integrase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10190_Mixed,_incl._ParB/Sulfiredoxin,_and_Pfam_phage_integrase_family


id: CL:10191
description: Mixed, incl. ParB/Sulfiredoxin, and Pfam phage integrase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10191_Mixed,_incl._ParB/Sulfiredoxin,_and_Pfam_phage_integrase_family


id: CL:10193
description: Mixed, incl. ParB/Sulfiredoxin, and Pfam phage integrase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10193_Mixed,_incl._ParB/Sulfiredoxin,_and_Pfam_phage_integrase_family


id: CL:10195
description: Mixed, incl. ParB/Sulfiredoxin, and Pfam phage integrase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10195_Mixed,_incl._ParB/Sulfiredoxin,_and_Pfam_phage_integrase_family


id: CL:10196
description: Mixed, incl. ParB/Sulfiredoxin, and FtsK domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10196_Mixed,_incl._ParB/Sulfiredoxin,_and_FtsK_domain


id: CL:10198
description: Mixed, incl. ParB/Sulfiredoxin, and FtsK domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10198_Mixed,_incl._ParB/Sulfiredoxin,_and_FtsK_domain


id: CL:10201
description: ParB/Sulfiredoxin, and CobQ/CobB/MinD/ParA nucleotide binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10201_ParB/Sulfiredoxin,_and_CobQ/CobB/MinD/ParA_nucleotide_binding_domain


id: CL:1022
description: Sigma-70 factor, region 1.1, and Methylated-DNA--protein-cysteine methyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1022_Sigma-70_factor,_region_1.1,_and_Methylated-DNA--protein-cysteine_methyltransferase


id: CL:10230
description: Pfam phage integrase family, and Metallopeptidase, catalytic domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10230_Pfam_phage_integrase_family,_and_Metallopeptidase,_catalytic_domain_superfamily


id: CL:10249
description: Mixed, incl. Aspartic-type peptidase activity, and Chromosome separation
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10249_Mixed,_incl._Aspartic-type_peptidase_activity,_and_Chromosome_separation


id: CL:10264
description: Mixed, incl. protein-DNA covalent cross-linking, and Integrase/recombinase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10264_Mixed,_incl._protein-DNA_covalent_cross-linking,_and_Integrase/recombinase,_N-terminal


id: CL:10266
description: Mixed, incl. protein-DNA covalent cross-linking, and Core-binding (CB) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10266_Mixed,_incl._protein-DNA_covalent_cross-linking,_and_Core-binding_(CB)_domain


id: CL:10289
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10289_Mostly_uncharacterized,_incl._Protein_of_unknown_function_DUF1003,_and_Inorganic_anion_transmembrane_transporter_activity

description:
  Mostly uncharacterized, incl. Protein of unknown function DUF1003, and Inorganic anion transmembrane transporter activity


id: CL:10291
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10291_Mixed,_incl._Inorganic_anion_transmembrane_transporter_activity,_and_Acetyltransferase_(GNAT)_family

description:
  Mixed, incl. Inorganic anion transmembrane transporter activity, and Acetyltransferase (GNAT) family


id: CL:10292
description: Mixed, incl. Inorganic anion transmembrane transporter activity, and Beta-galactosidase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10292_Mixed,_incl._Inorganic_anion_transmembrane_transporter_activity,_and_Beta-galactosidase_complex


id: CL:10293
description: Mixed, incl. Chloride channel, core, and Beta-galactosidase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10293_Mixed,_incl._Chloride_channel,_core,_and_Beta-galactosidase_complex


id: CL:10306
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10306_Mixed,_incl._Cellular_modified_amino_acid_catabolic_process,_and_Inorganic_anion_transmembrane_transporter_activity

description:
  Mixed, incl. Cellular modified amino acid catabolic process, and Inorganic anion transmembrane transporter activity


id: CL:10315
description: Mixed, incl. Acetyltransferase (GNAT) family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10315_Mixed,_incl._Acetyltransferase_(GNAT)_family


id: CL:10327
description: Mixed, incl. Protein of unknown function DUF1003, and General stress protein 17M-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10327_Mixed,_incl._Protein_of_unknown_function_DUF1003,_and_General_stress_protein_17M-like_domain


id: CL:10329
description: Protein of unknown function DUF1003, and General stress protein 17M-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10329_Protein_of_unknown_function_DUF1003,_and_General_stress_protein_17M-like_domain


id: CL:1033
description: Mixed, incl. DNA polymerase, error-prone, and UmuC domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1033_Mixed,_incl._DNA_polymerase,_error-prone,_and_UmuC_domain


id: CL:10344
description: Mixed, incl. YdhG-like domain, and Sialate O-acetylesterase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10344_Mixed,_incl._YdhG-like_domain,_and_Sialate_O-acetylesterase_domain


id: CL:10356
description: Mixed, incl. Protein YciF, and Autotransporter beta-domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10356_Mixed,_incl._Protein_YciF,_and_Autotransporter_beta-domain


id: CL:10358
description: Mixed, incl. Protein YciF, and Autotransporter beta-domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10358_Mixed,_incl._Protein_YciF,_and_Autotransporter_beta-domain


id: CL:10361
description: Mixed, incl. Protein YciF, and Autotransporter beta-domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10361_Mixed,_incl._Protein_YciF,_and_Autotransporter_beta-domain


id: CL:10364
description: Autotransporter beta-domain, and Protein YciF
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10364_Autotransporter_beta-domain,_and_Protein_YciF


id: CL:10379
description: Mixed, incl. Bacterial protein of unknown function (DUF899), and Transcription regulator Rrf2
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10379_Mixed,_incl._Bacterial_protein_of_unknown_function_(DUF899),_and_Transcription_regulator_Rrf2


id: CL:10390
description: Mixed, incl. Protein of unknown function DUF486, and Major Facilitator Superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10390_Mixed,_incl._Protein_of_unknown_function_DUF486,_and_Major_Facilitator_Superfamily


id: CL:10402
description: Mostly uncharacterized, incl. Ectoine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10402_Mostly_uncharacterized,_incl._Ectoine_metabolic_process


id: CL:10415
description: Penicillin binding, and BlaI transcriptional regulatory family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10415_Penicillin_binding,_and_BlaI_transcriptional_regulatory_family


id: CL:10417
description: BlaI transcriptional regulatory family, and Penicillin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10417_BlaI_transcriptional_regulatory_family,_and_Penicillin_binding


id: CL:10419
description: BlaI transcriptional regulatory family, and Peptidase M56
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10419_BlaI_transcriptional_regulatory_family,_and_Peptidase_M56


id: CL:10422
description: BlaI transcriptional regulatory family, and Peptidase M56
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10422_BlaI_transcriptional_regulatory_family,_and_Peptidase_M56


id: CL:10424
description: beta-Lactam resistance, and Peptidase M56
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10424_beta-Lactam_resistance,_and_Peptidase_M56


id: CL:10446
description: BlaI transcriptional regulatory family, and Peptidase M56
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10446_BlaI_transcriptional_regulatory_family,_and_Peptidase_M56


id: CL:10464
description: BlaR1 peptidase M56, and Penicillinase repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10464_BlaR1_peptidase_M56,_and_Penicillinase_repressor


id: CL:1049
description: Mixed, incl. Regulation of cell shape, and Tail specific protease
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1049_Mixed,_incl._Regulation_of_cell_shape,_and_Tail_specific_protease


id: CL:1050
description: Regulation of cell shape, and Reproduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1050_Regulation_of_cell_shape,_and_Reproduction


id: CL:10501
description: Mixed, incl. Right handed beta helix domain, and Activator of Hsp90 ATPase homolog 1-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10501_Mixed,_incl._Right_handed_beta_helix_domain,_and_Activator_of_Hsp90_ATPase_homolog_1-like_protein


id: CL:10519
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10519_Mixed,_incl._Serine/threonine-specific_protein_phosphatase/bis(5-nucleosyl)-tetraphosphatase,_and_Calcineurin-like_phosphoesterase_superfamily_domain

description:
  Mixed, incl. Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase, and Calcineurin-like phosphoesterase superfamily domain


id: CL:1052
description: Regulation of cell shape, and Reproduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1052_Regulation_of_cell_shape,_and_Reproduction


id: CL:1053
description: Regulation of cell shape, and Reproduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1053_Regulation_of_cell_shape,_and_Reproduction


id: CL:10538
description: Mixed, incl. Global regulator protein family, and Response to toxic substance
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10538_Mixed,_incl._Global_regulator_protein_family,_and_Response_to_toxic_substance


id: CL:10540
description: Mixed, incl. Global regulator protein family, and Histone-like DNA-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10540_Mixed,_incl._Global_regulator_protein_family,_and_Histone-like_DNA-binding_protein


id: CL:10541
description: Global regulator protein family, and Histone-like DNA-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10541_Global_regulator_protein_family,_and_Histone-like_DNA-binding_protein


id: CL:1056
description: Peptidoglycan biosynthesis, and Reproduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1056_Peptidoglycan_biosynthesis,_and_Reproduction


id: CL:10588
description: Mixed, incl. Response to toxic substance, and Endoribonuclease L-PSP/chorismate mutase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10588_Mixed,_incl._Response_to_toxic_substance,_and_Endoribonuclease_L-PSP/chorismate_mutase-like


id: CL:10589
description: Mixed, incl. Serine aminopeptidase, S33, and Phospholipase/Carboxylesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10589_Mixed,_incl._Serine_aminopeptidase,_S33,_and_Phospholipase/Carboxylesterase


id: CL:10592
description: Mixed, incl. Serine aminopeptidase, S33, and Phospholipase/Carboxylesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10592_Mixed,_incl._Serine_aminopeptidase,_S33,_and_Phospholipase/Carboxylesterase


id: CL:10614
description: Mixed, incl. Endoribonuclease L-PSP/chorismate mutase-like, and Peroxiredoxin-like 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10614_Mixed,_incl._Endoribonuclease_L-PSP/chorismate_mutase-like,_and_Peroxiredoxin-like_1


id: CL:10630
description: Mostly uncharacterized, incl. Antibiotic biosynthesis monooxygenase, and Regulation of growth
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10630_Mostly_uncharacterized,_incl._Antibiotic_biosynthesis_monooxygenase,_and_Regulation_of_growth


id: CL:10632
description: Mixed, incl. Regulation of growth, and Glycosaminoglycan binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10632_Mixed,_incl._Regulation_of_growth,_and_Glycosaminoglycan_binding


id: CL:10651
description: Mixed, incl. Protein of unknown function DUF6263, and Fructose-bisphosphate aldolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10651_Mixed,_incl._Protein_of_unknown_function_DUF6263,_and_Fructose-bisphosphate_aldolase_activity


id: CL:10663
description: Mostly uncharacterized, incl. Anion transmembrane transporter activity, and DNA transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10663_Mostly_uncharacterized,_incl._Anion_transmembrane_transporter_activity,_and_DNA_transport


id: CL:10664
description: Mostly uncharacterized, incl. DNA transport, and Histone modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10664_Mostly_uncharacterized,_incl._DNA_transport,_and_Histone_modification


id: CL:10666
description: Mixed, incl. DNA transport, and Histone modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10666_Mixed,_incl._DNA_transport,_and_Histone_modification


id: CL:10684
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10684_Mixed,_incl._Transcription-coupled_nucleotide-excision_repair,_and_L-methylmalonyl-CoA_metabolic_process

description:
  Mixed, incl. Transcription-coupled nucleotide-excision repair, and L-methylmalonyl-CoA metabolic process


id: CL:10697
description: Mixed, incl. Beta-Casp domain, and TrkA-C domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10697_Mixed,_incl._Beta-Casp_domain,_and_TrkA-C_domain


id: CL:10717
description: Mostly uncharacterized, incl. Methyltransferase FkbM, and GIY-YIG catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10717_Mostly_uncharacterized,_incl._Methyltransferase_FkbM,_and_GIY-YIG_catalytic_domain


id: CL:10718
description: Mostly uncharacterized, incl. Methyltransferase FkbM, and GIY-YIG catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10718_Mostly_uncharacterized,_incl._Methyltransferase_FkbM,_and_GIY-YIG_catalytic_domain


id: CL:10722
description: Mixed, incl. Band 7/SPFH domain superfamily, and Photosynthesis, light reaction
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10722_Mixed,_incl._Band_7/SPFH_domain_superfamily,_and_Photosynthesis,_light_reaction


id: CL:10735
description: Mixed, incl. Methyltransferase FkbM, and GIY-YIG catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10735_Mixed,_incl._Methyltransferase_FkbM,_and_GIY-YIG_catalytic_domain


id: CL:10750
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10750_Mixed,_incl._Post-transcriptional_regulation_of_gene_expression,_and_Six-bladed_beta-propeller,_TolB-like

description:
  Mixed, incl. Post-transcriptional regulation of gene expression, and Six-bladed beta-propeller, TolB-like


id: CL:10769
description: Mostly uncharacterized, incl. 5-3 DNA helicase activity, and Putative regulatory protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10769_Mostly_uncharacterized,_incl._5-3_DNA_helicase_activity,_and_Putative_regulatory_protein


id: CL:10771
description: Mixed, incl. IcmF-related, N-terminal domain, and EF-Hand 1, calcium-binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10771_Mixed,_incl._IcmF-related,_N-terminal_domain,_and_EF-Hand_1,_calcium-binding_site


id: CL:10785
description: Mixed, incl. 5-3 DNA helicase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10785_Mixed,_incl._5-3_DNA_helicase_activity


id: CL:10795
description: Thiolester hydrolase activity, and CheY-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10795_Thiolester_hydrolase_activity,_and_CheY-like_superfamily


id: CL:10812
description: Mostly uncharacterized, incl. Primosome complex, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10812_Mostly_uncharacterized,_incl._Primosome_complex,_and_DNA_integration


id: CL:10814
description: Mostly uncharacterized, incl. Primosome complex, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10814_Mostly_uncharacterized,_incl._Primosome_complex,_and_DNA_integration


id: CL:10815
description: Mixed, incl. DNA integration, and Reverse transcriptase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10815_Mixed,_incl._DNA_integration,_and_Reverse_transcriptase_domain


id: CL:10816
description: Mixed, incl. Primosome complex, and Reverse transcriptase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10816_Mixed,_incl._Primosome_complex,_and_Reverse_transcriptase_domain


id: CL:10818
description: Mixed, incl. Primosome complex, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10818_Mixed,_incl._Primosome_complex,_and_DNA_integration


id: CL:10820
description: Mixed, incl. Primosome complex, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10820_Mixed,_incl._Primosome_complex,_and_DNA_integration


id: CL:10830
description: Primosome complex, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10830_Primosome_complex,_and_DNA_integration


id: CL:10845
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10845_Mixed,_incl._RNA-directed_DNA_polymerase_(reverse_transcriptase),_msDNA,_and_Pfam_phage_integrase_family

description:
  Mixed, incl. RNA-directed DNA polymerase (reverse transcriptase), msDNA, and Pfam phage integrase family


id: CL:10858
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10858_Mostly_uncharacterized,_incl._Schlafen,_AlbA_2_domain,_and_AAA_domain,_putative_AbiEii_toxin,_Type_IV_TA_system

description:
  Mostly uncharacterized, incl. Schlafen, AlbA_2 domain, and AAA domain, putative AbiEii toxin, Type IV TA system


id: CL:10860
description: Mixed, incl. Schlafen, AlbA_2 domain, and AAA domain, putative AbiEii toxin, Type IV TA system
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10860_Mixed,_incl._Schlafen,_AlbA_2_domain,_and_AAA_domain,_putative_AbiEii_toxin,_Type_IV_TA_system


id: CL:10886
description: Mostly uncharacterized, incl. Peptidase S49, and Protein of unknown function (DUF3987)
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10886_Mostly_uncharacterized,_incl._Peptidase_S49,_and_Protein_of_unknown_function_(DUF3987)


id: CL:10887
description: Mostly uncharacterized, incl. Protein of unknown function (DUF3987)
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10887_Mostly_uncharacterized,_incl._Protein_of_unknown_function_(DUF3987)


id: CL:10930
description: Mixed, incl. DDE transposase sub-family, and Helix_turn_helix, Lux Regulon
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10930_Mixed,_incl._DDE_transposase_sub-family,_and_Helix_turn_helix,_Lux_Regulon


id: CL:10941
description: Mixed, incl. Amidohydrolase, and dUMP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10941_Mixed,_incl._Amidohydrolase,_and_dUMP_metabolic_process


id: CL:10943
description: Mixed, incl. dUMP metabolic process, and Amidohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10943_Mixed,_incl._dUMP_metabolic_process,_and_Amidohydrolase


id: CL:10955
description: Mixed, incl. SnoaL-like domain, and Cupin 2, conserved barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10955_Mixed,_incl._SnoaL-like_domain,_and_Cupin_2,_conserved_barrel


id: CL:10964
description: Mostly uncharacterized, incl. Domain of unknown function DUF2314, and Alpha/beta hydrolase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10964_Mostly_uncharacterized,_incl._Domain_of_unknown_function_DUF2314,_and_Alpha/beta_hydrolase_family


id: CL:10966
description: Mixed, incl. Domain of unknown function DUF2314, and Alpha/beta hydrolase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10966_Mixed,_incl._Domain_of_unknown_function_DUF2314,_and_Alpha/beta_hydrolase_family


id: CL:1098
description: Mixed, incl. Amino sugar biosynthetic process, and UDP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1098_Mixed,_incl._Amino_sugar_biosynthetic_process,_and_UDP_binding_domain


id: CL:10981
description: Mixed, incl. Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10981_Mixed,_incl._Methyltransferase_domain


id: CL:10995
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10995_Mostly_uncharacterized,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Domain_of_unknown_function_DUF2007

description:
  Mostly uncharacterized, incl. Helix-turn-helix XRE-family like proteins, and Domain of unknown function DUF2007


id: CL:10996
description: Mixed, incl. Helix-turn-helix XRE-family like proteins, and Domain of unknown function DUF2007
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10996_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Domain_of_unknown_function_DUF2007


id: CL:10997
description: Mixed, incl. Helix-turn-helix XRE-family like proteins, and Domain of unknown function DUF2007
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10997_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Domain_of_unknown_function_DUF2007


id: CL:10998
description: Mixed, incl. Helix-turn-helix XRE-family like proteins, and Domain of unknown function DUF2007
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:10998_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Domain_of_unknown_function_DUF2007


id: CL:11000
description: Mixed, incl. Helix-turn-helix XRE-family like proteins, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11000_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_AAA_domain


id: CL:11024
description: Mixed, incl. Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11024_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins


id: CL:11034
description: Mostly uncharacterized, incl. Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11034_Mostly_uncharacterized,_incl._Helix-turn-helix_XRE-family_like_proteins


id: CL:11045
description: Mostly uncharacterized, incl. Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11045_Mostly_uncharacterized,_incl._Helix-turn-helix_XRE-family_like_proteins


id: CL:11056
description: Mostly uncharacterized, incl. Vacuole, and Protein of unknown function DUF2997
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11056_Mostly_uncharacterized,_incl._Vacuole,_and_Protein_of_unknown_function_DUF2997


id: CL:11058
description: Mostly uncharacterized, incl. Vacuole
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11058_Mostly_uncharacterized,_incl._Vacuole


id: CL:11075
description: Mixed, incl. ATPase, AAA-type, core
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11075_Mixed,_incl._ATPase,_AAA-type,_core


id: CL:11087
description: Mostly uncharacterized, incl. TSP type-3 repeat, and Zonular occludens toxin (Zot)
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11087_Mostly_uncharacterized,_incl._TSP_type-3_repeat,_and_Zonular_occludens_toxin_(Zot)


id: CL:11101
description: Mixed, incl. TSP type-3 repeat, and Zonular occludens toxin (Zot)
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11101_Mixed,_incl._TSP_type-3_repeat,_and_Zonular_occludens_toxin_(Zot)


id: CL:11111
description: Mostly uncharacterized, incl. TSP type-3 repeat, and Zonular occludens toxin (Zot)
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11111_Mostly_uncharacterized,_incl._TSP_type-3_repeat,_and_Zonular_occludens_toxin_(Zot)


id: CL:1112
description: Peptidoglycan transport, and Twin-arginine translocation pathway, signal sequence
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1112_Peptidoglycan_transport,_and_Twin-arginine_translocation_pathway,_signal_sequence


id: CL:11125
description: Mixed, incl. TSP type-3 repeat, and Zonular occludens toxin (Zot)
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11125_Mixed,_incl._TSP_type-3_repeat,_and_Zonular_occludens_toxin_(Zot)


id: CL:11134
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11134_Mostly_uncharacterized,_incl._HNH_nucleases,_and_Biological_process_involved_in_interspecies_interaction_between_organisms

description:
  Mostly uncharacterized, incl. HNH nucleases, and Biological process involved in interspecies interaction between organisms


id: CL:11135
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11135_Mostly_uncharacterized,_incl._HNH_nucleases,_and_Biological_process_involved_in_interspecies_interaction_between_organisms

description:
  Mostly uncharacterized, incl. HNH nucleases, and Biological process involved in interspecies interaction between organisms


id: CL:11136
description: Mostly uncharacterized, incl. HNH nucleases, and Membrane assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11136_Mostly_uncharacterized,_incl._HNH_nucleases,_and_Membrane_assembly


id: CL:11137
description: Mostly uncharacterized, incl. HNH nucleases, and Membrane assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11137_Mostly_uncharacterized,_incl._HNH_nucleases,_and_Membrane_assembly


id: CL:11138
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11138_Mostly_uncharacterized,_incl._Membrane_assembly,_and_Biological_process_involved_in_interspecies_interaction_between_organisms

description:
  Mostly uncharacterized, incl. Membrane assembly, and Biological process involved in interspecies interaction between organisms


id: CL:11139
description: Mostly uncharacterized, incl. Host cell, and Phage capsid
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11139_Mostly_uncharacterized,_incl._Host_cell,_and_Phage_capsid


id: CL:11141
description: Mostly uncharacterized, incl. Bacteriophage HK97-gp10, putative tail-component, and Entry into host
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11141_Mostly_uncharacterized,_incl._Bacteriophage_HK97-gp10,_putative_tail-component,_and_Entry_into_host


id: CL:11143
description: Mixed, incl. Entry into host, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11143_Mixed,_incl._Entry_into_host,_and_Glycosyl_transferase_family_2


id: CL:11164
description: Mixed, incl. Bacteriophage HK97-gp10, putative tail-component, and Extracellular region
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11164_Mixed,_incl._Bacteriophage_HK97-gp10,_putative_tail-component,_and_Extracellular_region


id: CL:11176
description: Mixed, incl. Host cell, and Phage capsid
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11176_Mixed,_incl._Host_cell,_and_Phage_capsid


id: CL:11189
description: Mixed, incl. PPIC-type PPIASE domain, and HEAT repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11189_Mixed,_incl._PPIC-type_PPIASE_domain,_and_HEAT_repeats


id: CL:11205
description: Mixed, incl. HNH nucleases, and Domain of unknown function DUF1232
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11205_Mixed,_incl._HNH_nucleases,_and_Domain_of_unknown_function_DUF1232


id: CL:11208
description: Mixed, incl. Domain of unknown function DUF1232, and Protein transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11208_Mixed,_incl._Domain_of_unknown_function_DUF1232,_and_Protein_transmembrane_transport


id: CL:1121
description: Mixed, incl. Tail specific protease, and Mce/MlaD
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1121_Mixed,_incl._Tail_specific_protease,_and_Mce/MlaD


id: CL:11223
description: Mixed, incl. TTHA0068-like superfamily, and HNH endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11223_Mixed,_incl._TTHA0068-like_superfamily,_and_HNH_endonuclease


id: CL:11232
description: Mostly uncharacterized, incl. Carbohydrate derivative catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11232_Mostly_uncharacterized,_incl._Carbohydrate_derivative_catabolic_process


id: CL:11246
description: Mixed, incl. Peptidoglycan catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11246_Mixed,_incl._Peptidoglycan_catabolic_process


id: CL:11266
description: Mostly uncharacterized, incl. HNH nucleases, and PD-(D/E)XK nuclease superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11266_Mostly_uncharacterized,_incl._HNH_nucleases,_and_PD-(D/E)XK_nuclease_superfamily


id: CL:11267
description: Mostly uncharacterized, incl. PD-(D/E)XK nuclease superfamily, and HNH nucleases
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11267_Mostly_uncharacterized,_incl._PD-(D/E)XK_nuclease_superfamily,_and_HNH_nucleases


id: CL:11268
description: Mostly uncharacterized, incl. HNH nucleases
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11268_Mostly_uncharacterized,_incl._HNH_nucleases


id: CL:11270
description: Mostly uncharacterized, incl. HNH nucleases
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11270_Mostly_uncharacterized,_incl._HNH_nucleases


id: CL:11302
description: Mixed, incl. PD-(D/E)XK nuclease superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11302_Mixed,_incl._PD-(D/E)XK_nuclease_superfamily


id: CL:11316
description: Mostly uncharacterized, incl. HNH endonuclease, and Papain-like cysteine peptidase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11316_Mostly_uncharacterized,_incl._HNH_endonuclease,_and_Papain-like_cysteine_peptidase_superfamily


id: CL:11317
description: Mostly uncharacterized, incl. HNH endonuclease, and Papain-like cysteine peptidase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11317_Mostly_uncharacterized,_incl._HNH_endonuclease,_and_Papain-like_cysteine_peptidase_superfamily


id: CL:11368
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11368_Mostly_uncharacterized,_incl._IstB-like_ATP_binding_protein,_and_GTPase-associated_protein_1,_middle_domain

description:
  Mostly uncharacterized, incl. IstB-like ATP binding protein, and GTPase-associated protein 1, middle domain


id: CL:11370
description: Mixed, incl. IstB-like ATP binding protein, and Putative DNA-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11370_Mixed,_incl._IstB-like_ATP_binding_protein,_and_Putative_DNA-binding_domain_superfamily


id: CL:11388
description: Mixed, incl. GTPase-associated protein 1, middle domain, and GYF domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11388_Mixed,_incl._GTPase-associated_protein_1,_middle_domain,_and_GYF_domain_2


id: CL:11397
description: Mostly uncharacterized, incl. Viral process, and Tail completion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11397_Mostly_uncharacterized,_incl._Viral_process,_and_Tail_completion_protein


id: CL:11398
description: Mostly uncharacterized, incl. Viral process, and Tail completion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11398_Mostly_uncharacterized,_incl._Viral_process,_and_Tail_completion_protein


id: CL:1140
description: Protein binding, and Thioredoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1140_Protein_binding,_and_Thioredoxin_domain


id: CL:11400
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11400_Mostly_uncharacterized,_incl._Tail_completion_protein,_and_Nucleoside_monophosphate_catabolic_process

description:
  Mostly uncharacterized, incl. Tail completion protein, and Nucleoside monophosphate catabolic process


id: CL:11403
description: Mostly uncharacterized, incl. Entry into host
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11403_Mostly_uncharacterized,_incl._Entry_into_host


id: CL:11424
description: Mostly uncharacterized, incl. Tail completion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11424_Mostly_uncharacterized,_incl._Tail_completion_protein


id: CL:1143
description: Mixed, incl. Protein folding, and HSP20-like chaperone
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1143_Mixed,_incl._Protein_folding,_and_HSP20-like_chaperone


id: CL:11445
description: Mixed, incl. Cation/H+ exchanger, and Identical protein binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11445_Mixed,_incl._Cation/H+_exchanger,_and_Identical_protein_binding


id: CL:1145
description: Mixed, incl. Unfolded protein binding, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1145_Mixed,_incl._Unfolded_protein_binding,_and_ATP-dependent_peptidase_activity


id: CL:1146
description: Unfolded protein binding, and Clp, repeat (R) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1146_Unfolded_protein_binding,_and_Clp,_repeat_(R)_domain


id: CL:11470
description: Mixed, incl. Zinc finger C2H2-type, and Chromosome condensation
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11470_Mixed,_incl._Zinc_finger_C2H2-type,_and_Chromosome_condensation


id: CL:1148
description: Unfolded protein binding, and ClpA/B, conserved site 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1148_Unfolded_protein_binding,_and_ClpA/B,_conserved_site_1


id: CL:11482
description: Mostly uncharacterized, incl. Tail completion protein, and Entry into host
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11482_Mostly_uncharacterized,_incl._Tail_completion_protein,_and_Entry_into_host


id: CL:11483
description: Mostly uncharacterized, incl. Entry into host, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11483_Mostly_uncharacterized,_incl._Entry_into_host,_and_Glycosyl_transferase_family_2


id: CL:11485
description: Mostly uncharacterized, incl. Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11485_Mostly_uncharacterized,_incl._Glycosyl_transferase_family_2


id: CL:11507
description: Mixed, incl. Tail completion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11507_Mixed,_incl._Tail_completion_protein


id: CL:11519
description: Mostly uncharacterized, incl. Flagellar biosynthesis protein, FliO
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11519_Mostly_uncharacterized,_incl._Flagellar_biosynthesis_protein,_FliO


id: CL:1153
description: Heat shock protein 70kD, peptide-binding domain superfamily, and Chaperone DnaJ, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1153_Heat_shock_protein_70kD,_peptide-binding_domain_superfamily,_and_Chaperone_DnaJ,_C-terminal


id: CL:11534
description: Mixed, incl. 5-3 DNA helicase activity, and Negative regulation of RNA biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11534_Mixed,_incl._5-3_DNA_helicase_activity,_and_Negative_regulation_of_RNA_biosynthetic_process


id: CL:11603
description: Mostly uncharacterized, incl. Alpha/Beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11603_Mostly_uncharacterized,_incl._Alpha/Beta_hydrolase_fold


id: CL:11632
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11632_Mixed,_incl._Putative_MetA-pathway_of_phenol_degradation,_and_Prokaryotic_N-terminal_methylation_motif

description:
  Mixed, incl. Putative MetA-pathway of phenol degradation, and Prokaryotic N-terminal methylation motif


id: CL:1165
description: De novo post-translational protein folding
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1165_De_novo_post-translational_protein_folding


id: CL:11676
description: Mixed, incl. Papain-like cysteine peptidase superfamily, and Trypsin-like peptidase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11676_Mixed,_incl._Papain-like_cysteine_peptidase_superfamily,_and_Trypsin-like_peptidase_domain


id: CL:11830
description: Mixed, incl. Protein of unknown function DUF3987), and Putative DNA-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:11830_Mixed,_incl._Protein_of_unknown_function_DUF3987),_and_Putative_DNA-binding_domain_superfamily


id: CL:1193
description: Thioredoxin, conserved site, and Response to superoxide
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1193_Thioredoxin,_conserved_site,_and_Response_to_superoxide


id: CL:12026
description: Mixed, incl. Carboxypeptidase regulatory-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:12026_Mixed,_incl._Carboxypeptidase_regulatory-like_domain


id: CL:12063
description: Mostly uncharacterized, incl. Papain-like cysteine peptidase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:12063_Mostly_uncharacterized,_incl._Papain-like_cysteine_peptidase_superfamily


id: CL:12098
description: Mixed, incl. Protein of unknown function DUF1571, and PDZ domain 6
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:12098_Mixed,_incl._Protein_of_unknown_function_DUF1571,_and_PDZ_domain_6


id: CL:12110
description: Mostly uncharacterized, incl. Viral process, and Peptidoglycan catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:12110_Mostly_uncharacterized,_incl._Viral_process,_and_Peptidoglycan_catabolic_process


id: CL:12111
description: Mostly uncharacterized, incl. Peptidoglycan catabolic process, and Entry into host
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:12111_Mostly_uncharacterized,_incl._Peptidoglycan_catabolic_process,_and_Entry_into_host


id: CL:12112
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:12112_Mostly_uncharacterized,_incl._Peptidoglycan_catabolic_process,_and_Quinoprotein_alcohol_dehydrogenase-like_superfamily

description:
  Mostly uncharacterized, incl. Peptidoglycan catabolic process, and Quinoprotein alcohol dehydrogenase-like superfamily


id: CL:12115
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:12115_Mixed,_incl._Peptidoglycan_catabolic_process,_and_Quinoprotein_alcohol_dehydrogenase-like_superfamily

description:
  Mixed, incl. Peptidoglycan catabolic process, and Quinoprotein alcohol dehydrogenase-like superfamily


id: CL:12155
description: Mixed, incl. Lipid translocation, and Tetratricopeptide-like helical domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:12155_Mixed,_incl._Lipid_translocation,_and_Tetratricopeptide-like_helical_domain_superfamily


id: CL:12203
description: Mostly uncharacterized, incl. DDE transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:12203_Mostly_uncharacterized,_incl._DDE_transposase_sub-family


id: CL:12213
description: Mixed, incl. DDE transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:12213_Mixed,_incl._DDE_transposase_sub-family


id: CL:12237
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:12237_Mixed,_incl._Leucine-rich_repeat_domain_superfamily,_and_WD40/YVTN_repeat-like-containing_domain_superfamily

description:
  Mixed, incl. Leucine-rich repeat domain superfamily, and WD40/YVTN repeat-like-containing domain superfamily


id: CL:12251
description: Mixed, incl. Type IV leader peptidase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:12251_Mixed,_incl._Type_IV_leader_peptidase_family


id: CL:1226
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor, and AhpC/TSA family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1226_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor,_and_AhpC/TSA_family


id: CL:1227
description: Mixed, incl. Redoxin, and Thioredoxin, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1227_Mixed,_incl._Redoxin,_and_Thioredoxin,_conserved_site


id: CL:1230
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1230_Mixed,_incl._Disulphide_bond_corrector_protein_DsbC,_and_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor

description:
  Mixed, incl. Disulphide bond corrector protein DsbC, and Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor


id: CL:12305
description: Mixed, incl. Shew3726-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:12305_Mixed,_incl._Shew3726-like_superfamily


id: CL:1247
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1247_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: CL:1276
description: Mixed, incl. Rhomboid family, and TAT protein transport complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1276_Mixed,_incl._Rhomboid_family,_and_TAT_protein_transport_complex


id: CL:1277
description: Mixed, incl. Rhomboid family, and TAT protein transport complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1277_Mixed,_incl._Rhomboid_family,_and_TAT_protein_transport_complex


id: CL:1278
description: TAT protein transport complex, and Rhomboid family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1278_TAT_protein_transport_complex,_and_Rhomboid_family


id: CL:1290
description: Peptidase M41-like, and Band 7 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1290_Peptidase_M41-like,_and_Band_7_domain


id: CL:1300
description: Mixed, incl. Protein of unknown function DUF6655, and Thioredoxin-like fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1300_Mixed,_incl._Protein_of_unknown_function_DUF6655,_and_Thioredoxin-like_fold


id: CL:1310
description: Mixed, incl. Oxidative phosphorylation, and ACP-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1310_Mixed,_incl._Oxidative_phosphorylation,_and_ACP-like_superfamily


id: CL:1312
description: Mixed, incl. Oxidative phosphorylation, and ACP-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1312_Mixed,_incl._Oxidative_phosphorylation,_and_ACP-like_superfamily


id: CL:1313
description: Mixed, incl. Oxidative phosphorylation, and ACP-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1313_Mixed,_incl._Oxidative_phosphorylation,_and_ACP-like_superfamily


id: CL:1314
description: Oxidative phosphorylation, and ACP-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1314_Oxidative_phosphorylation,_and_ACP-like_superfamily


id: CL:1316
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1316_Oxidoreduction-driven_active_transmembrane_transporter_activity,_and_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor

description:
  Oxidoreduction-driven active transmembrane transporter activity, and Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor


id: CL:1318
description: Oxidoreduction-driven active transmembrane transporter activity, and Quinone
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1318_Oxidoreduction-driven_active_transmembrane_transporter_activity,_and_Quinone


id: CL:1319
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1319_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: CL:1321
description: Quinone, and Proton-conducting membrane transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1321_Quinone,_and_Proton-conducting_membrane_transporter


id: CL:1343
description: Quinone, and NADH-quinone oxidoreductase, chain I
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1343_Quinone,_and_NADH-quinone_oxidoreductase,_chain_I


id: CL:1370
description: NADH dehydrogenase complex, and Molybdopterin oxidoreductase Fe4S4 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1370_NADH_dehydrogenase_complex,_and_Molybdopterin_oxidoreductase_Fe4S4_domain


id: CL:1382
description: Cytochrome-c oxidase activity, and Cytochrome b/b6-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1382_Cytochrome-c_oxidase_activity,_and_Cytochrome_b/b6-like_domain_superfamily


id: CL:1385
description: Respiratory chain, and Cytochrome c oxidase subunit III
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1385_Respiratory_chain,_and_Cytochrome_c_oxidase_subunit_III


id: CL:1402
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1402_Cytochrome_b/b6-like_domain_superfamily,_and_Oxidoreductase_activity,_acting_on_diphenols_and_related_substances_as_donors

description:
  Cytochrome b/b6-like domain superfamily, and Oxidoreductase activity, acting on diphenols and related substances as donors


id: CL:1424
description: Mixed, incl. Phosphopantetheine attachment site, and dephospho-CoA kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1424_Mixed,_incl._Phosphopantetheine_attachment_site,_and_dephospho-CoA_kinase_activity


id: CL:1440
description: Mixed, incl. NrfD family, and Cytochrome c3
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1440_Mixed,_incl._NrfD_family,_and_Cytochrome_c3


id: CL:1443
description: Mixed, incl. NrfD family, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1443_Mixed,_incl._NrfD_family,_and_4Fe-4S_dicluster_domain


id: CL:1456
description: Mixed, incl. NrfD family, and Cytochrome c3
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1456_Mixed,_incl._NrfD_family,_and_Cytochrome_c3


id: CL:1470
description: Mixed, incl. Cupredoxin, and Heme biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1470_Mixed,_incl._Cupredoxin,_and_Heme_biosynthetic_process


id: CL:1486
description: Heme biosynthetic process, and Protein of unknown function DUF420
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1486_Heme_biosynthetic_process,_and_Protein_of_unknown_function_DUF420


id: CL:1502
description: Mixed, incl. Respiratory chain complex IV, and Haloacid dehalogenase-like hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1502_Mixed,_incl._Respiratory_chain_complex_IV,_and_Haloacid_dehalogenase-like_hydrolase


id: CL:1522
description: Biosynthesis of amino acids, and Ribonucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1522_Biosynthesis_of_amino_acids,_and_Ribonucleoside_monophosphate_metabolic_process


id: CL:1523
description: Biosynthesis of amino acids, and Ribonucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1523_Biosynthesis_of_amino_acids,_and_Ribonucleoside_monophosphate_metabolic_process


id: CL:1525
description: 2-Oxocarboxylic acid metabolism, and Lysine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1525_2-Oxocarboxylic_acid_metabolism,_and_Lysine_biosynthesis


id: CL:1526
description: Lysine biosynthesis, and Arginine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1526_Lysine_biosynthesis,_and_Arginine_biosynthetic_process


id: CL:1529
description: Lysine biosynthesis, and Diaminopimelate decarboxylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1529_Lysine_biosynthesis,_and_Diaminopimelate_decarboxylase_activity


id: CL:1571
description: Valine, leucine and isoleucine biosynthesis, and Dehydratase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1571_Valine,_leucine_and_isoleucine_biosynthesis,_and_Dehydratase_family


id: CL:1574
description: Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1574_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:1575
description: C5-Branched dibasic acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1575_C5-Branched_dibasic_acid_metabolism


id: CL:1587
description: Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1587_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:1606
description: Phenylalanine, tyrosine and tryptophan biosynthesis, and Histidine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1606_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis,_and_Histidine_biosynthetic_process


id: CL:1607
description: Phenylalanine, tyrosine and tryptophan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1607_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis


id: CL:1609
description: Chorismate biosynthetic process, and Type I 3-dehydroquinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1609_Chorismate_biosynthetic_process,_and_Type_I_3-dehydroquinase


id: CL:1611
description: Shikimate dehydrogenase family, and Chorismate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1611_Shikimate_dehydrogenase_family,_and_Chorismate_biosynthetic_process


id: CL:1673
description: Ribonucleoside monophosphate metabolic process, and Purine nucleoside phosphorylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1673_Ribonucleoside_monophosphate_metabolic_process,_and_Purine_nucleoside_phosphorylase


id: CL:1674
description: Purine nucleoside monophosphate metabolic process, and Purine nucleoside phosphorylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1674_Purine_nucleoside_monophosphate_metabolic_process,_and_Purine_nucleoside_phosphorylase


id: CL:1675
description: De novo IMP biosynthetic process, and Tetrahydrofolate interconversion
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1675_De_novo_IMP_biosynthetic_process,_and_Tetrahydrofolate_interconversion


id: CL:1676
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1676_De_novo_IMP_biosynthetic_process


id: CL:1679
description: Purine nucleobase metabolic process, and Phosphoribosylformylglycinamidine synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1679_Purine_nucleobase_metabolic_process,_and_Phosphoribosylformylglycinamidine_synthase_activity


id: CL:1708
description: GMP biosynthesis, and Purine salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1708_GMP_biosynthesis,_and_Purine_salvage


id: CL:1744
description: Mixed, incl. Phenylalanine metabolism, and Asparagine synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1744_Mixed,_incl._Phenylalanine_metabolism,_and_Asparagine_synthase


id: CL:1745
description: Asparagine synthase, and NAD biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1745_Asparagine_synthase,_and_NAD_biosynthetic_process


id: CL:1765
description: Aminotransferases, class-I, pyridoxal-phosphate-binding site, and D-Alanine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1765_Aminotransferases,_class-I,_pyridoxal-phosphate-binding_site,_and_D-Alanine_metabolism


id: CL:1777
description: Mixed, incl. Glyoxylate and dicarboxylate metabolism, and Citrate cycle (TCA cycle)
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1777_Mixed,_incl._Glyoxylate_and_dicarboxylate_metabolism,_and_Citrate_cycle_(TCA_cycle)


id: CL:1778
description: Mixed, incl. Carbon metabolism, and Valine, leucine and isoleucine degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1778_Mixed,_incl._Carbon_metabolism,_and_Valine,_leucine_and_isoleucine_degradation


id: CL:1779
description: Mixed, incl. Carbon metabolism, and Valine, leucine and isoleucine degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1779_Mixed,_incl._Carbon_metabolism,_and_Valine,_leucine_and_isoleucine_degradation


id: CL:1780
description: Mixed, incl. Propanoate metabolism, and Citrate cycle (TCA cycle)
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1780_Mixed,_incl._Propanoate_metabolism,_and_Citrate_cycle_(TCA_cycle)


id: CL:1781
description: Citrate cycle (TCA cycle), and Glycine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1781_Citrate_cycle_(TCA_cycle),_and_Glycine_catabolic_process


id: CL:1782
description: Oxidoreductase complex, and FAD/NAD-linked reductase, dimerisation domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1782_Oxidoreductase_complex,_and_FAD/NAD-linked_reductase,_dimerisation_domain_superfamily


id: CL:1783
description: Glycine catabolic process, and Glutamine synthetase, beta-Grasp domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1783_Glycine_catabolic_process,_and_Glutamine_synthetase,_beta-Grasp_domain


id: CL:1784
description: Glutamine synthetase, beta-Grasp domain, and GXGXG motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1784_Glutamine_synthetase,_beta-Grasp_domain,_and_GXGXG_motif


id: CL:1803
description: e3 binding domain, and Dihydrolipoamide dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1803_e3_binding_domain,_and_Dihydrolipoamide_dehydrogenase


id: CL:1819
description: Tricarboxylic acid cycle, and Fumarate reductase flavoprotein C-term
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1819_Tricarboxylic_acid_cycle,_and_Fumarate_reductase_flavoprotein_C-term


id: CL:1831
description: CoA-ligase, and Butanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1831_CoA-ligase,_and_Butanoate_metabolism


id: CL:1848
description: Mixed, incl. Valine, leucine and isoleucine degradation, and acetyl-CoA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1848_Mixed,_incl._Valine,_leucine_and_isoleucine_degradation,_and_acetyl-CoA_metabolic_process


id: CL:1849
description: Lipid oxidation, and Acyl-CoA dehydrogenase, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1849_Lipid_oxidation,_and_Acyl-CoA_dehydrogenase,_N-terminal_domain


id: CL:1876
description: acetyl-CoA metabolic process, and beta-Alanine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1876_acetyl-CoA_metabolic_process,_and_beta-Alanine_metabolism


id: CL:1878
description: acetyl-CoA metabolic process, and Aldehyde dehydrogenase, glutamic acid active site
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1878_acetyl-CoA_metabolic_process,_and_Aldehyde_dehydrogenase,_glutamic_acid_active_site


id: CL:1902
description: Proline biosynthesis, and FAD-linked oxidoreductase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1902_Proline_biosynthesis,_and_FAD-linked_oxidoreductase-like


id: CL:1929
description: Mixed, incl. Cysteine-rich domain, and LUD domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1929_Mixed,_incl._Cysteine-rich_domain,_and_LUD_domain


id: CL:1930
description: Cysteine-rich domain, and LUD domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1930_Cysteine-rich_domain,_and_LUD_domain


id: CL:1946
description: Mixed, incl. 8-amino-7-oxononanoate synthase activity, and Beta-eliminating lyase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1946_Mixed,_incl._8-amino-7-oxononanoate_synthase_activity,_and_Beta-eliminating_lyase


id: CL:1956
description: Mixed, incl. Pentose phosphate pathway, and Glycolysis / Gluconeogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1956_Mixed,_incl._Pentose_phosphate_pathway,_and_Glycolysis_/_Gluconeogenesis


id: CL:1957
description: Pentose phosphate pathway, and Glycolysis / Gluconeogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1957_Pentose_phosphate_pathway,_and_Glycolysis_/_Gluconeogenesis


id: CL:1958
description: Pentose phosphate pathway, and Glycolysis / Gluconeogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1958_Pentose_phosphate_pathway,_and_Glycolysis_/_Gluconeogenesis


id: CL:1959
description: Pentose phosphate pathway, and Glycolysis / Gluconeogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1959_Pentose_phosphate_pathway,_and_Glycolysis_/_Gluconeogenesis


id: CL:1960
description: Glycolysis / Gluconeogenesis, and NADPH regeneration
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1960_Glycolysis_/_Gluconeogenesis,_and_NADPH_regeneration


id: CL:1962
description: Mixed, incl. Glycolytic process, and L-lactate dehydrogenase, active site
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1962_Mixed,_incl._Glycolytic_process,_and_L-lactate_dehydrogenase,_active_site


id: CL:1964
description: Glycolytic process, and Transketolase or transaldolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1964_Glycolytic_process,_and_Transketolase_or_transaldolase_activity


id: CL:1967
description: Transketolase or transaldolase activity, and Phosphofructokinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1967_Transketolase_or_transaldolase_activity,_and_Phosphofructokinase


id: CL:1988
description: L-lactate dehydrogenase, active site, and Potassium ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:1988_L-lactate_dehydrogenase,_active_site,_and_Potassium_ion_binding


id: CL:2005
description: ROK family, and Aldose 1-epimerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2005_ROK_family,_and_Aldose_1-epimerase


id: CL:2017
description: Caprolactam degradation, and Glucose/Sorbosone dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2017_Caprolactam_degradation,_and_Glucose/Sorbosone_dehydrogenase


id: CL:2028
description: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain, and Metalloenzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2028_D-isomer_specific_2-hydroxyacid_dehydrogenase,_catalytic_domain,_and_Metalloenzyme


id: CL:2041
description: Mixed, incl. Carbohydrate transport, and Pentose and glucuronate interconversions
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2041_Mixed,_incl._Carbohydrate_transport,_and_Pentose_and_glucuronate_interconversions


id: CL:2042
description: Carbohydrate transport, and Transcriptional regulator LacI/GalR-like, sensor domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2042_Carbohydrate_transport,_and_Transcriptional_regulator_LacI/GalR-like,_sensor_domain


id: CL:2045
description: Periplasmic binding protein, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2045_Periplasmic_binding_protein,_and_ABC_transporter,_permease


id: CL:2058
description: Phosphotransferase system (PTS), and Phosphomethylpyrimidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2058_Phosphotransferase_system_(PTS),_and_Phosphomethylpyrimidine_kinase


id: CL:2069
description: Pentose and glucuronate interconversions, and Ribose/Galactose Isomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2069_Pentose_and_glucuronate_interconversions,_and_Ribose/Galactose_Isomerase


id: CL:2071
description: Ribose/Galactose Isomerase, and Glucuronate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2071_Ribose/Galactose_Isomerase,_and_Glucuronate_metabolic_process


id: CL:2093
description: Mixed, incl. Mannose-6-phosphate isomerase, type I, and SIS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2093_Mixed,_incl._Mannose-6-phosphate_isomerase,_type_I,_and_SIS_domain


id: CL:2113
description: Mixed, incl. Vitamin metabolic process, and Porphyrin and chlorophyll metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2113_Mixed,_incl._Vitamin_metabolic_process,_and_Porphyrin_and_chlorophyll_metabolism


id: CL:2114
description: Vitamin metabolic process, and Porphyrin and chlorophyll metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2114_Vitamin_metabolic_process,_and_Porphyrin_and_chlorophyll_metabolism


id: CL:2115
description: Vitamin metabolic process, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2115_Vitamin_metabolic_process,_and_Coenzyme_A_biosynthesis


id: CL:2116
description: Cellular modified amino acid metabolic process, and Riboflavin metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2116_Cellular_modified_amino_acid_metabolic_process,_and_Riboflavin_metabolism


id: CL:2118
description: Riboflavin metabolism, and Pteridine-containing compound biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2118_Riboflavin_metabolism,_and_Pteridine-containing_compound_biosynthetic_process


id: CL:2120
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2120_Folic_acid_biosynthetic_process,_and_GTP_cyclohydrolase_I,_C-terminal/NADPH-dependent_7-cyano-7-deazaguanine_reductase

description:
  Folic acid biosynthetic process, and GTP cyclohydrolase I, C-terminal/NADPH-dependent 7-cyano-7-deazaguanine reductase


id: CL:2142
description: Pantothenate metabolic process, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2142_Pantothenate_metabolic_process,_and_Coenzyme_A_biosynthesis


id: CL:2157
description: Biotin biosynthesis, and Thiamine diphosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2157_Biotin_biosynthesis,_and_Thiamine_diphosphate_metabolic_process


id: CL:2159
description: Thiamine biosynthesis, and ThiF family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2159_Thiamine_biosynthesis,_and_ThiF_family


id: CL:2180
description: Terpenoid backbone biosynthesis, and Porphyrin and chlorophyll metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2180_Terpenoid_backbone_biosynthesis,_and_Porphyrin_and_chlorophyll_metabolism


id: CL:2182
description: Porphyrin biosynthesis, and Uroporphyrinogen-III synthase HemD
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2182_Porphyrin_biosynthesis,_and_Uroporphyrinogen-III_synthase_HemD


id: CL:2183
description: Protoporphyrinogen IX metabolic process, and Uroporphyrinogen-III synthase HemD
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2183_Protoporphyrinogen_IX_metabolic_process,_and_Uroporphyrinogen-III_synthase_HemD


id: CL:2196
description: Coproporphyrinogen oxidase activity, and Porphyrin biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2196_Coproporphyrinogen_oxidase_activity,_and_Porphyrin_biosynthesis


id: CL:2208
description: Terpenoid backbone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2208_Terpenoid_backbone_biosynthesis


id: CL:2222
description: Polyprenyl synthetase, and FAD-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2222_Polyprenyl_synthetase,_and_FAD-binding_domain


id: CL:2231
description: Mixed, incl. Adenylate cyclase activity, and Pyrimidine nucleoside triphosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2231_Mixed,_incl._Adenylate_cyclase_activity,_and_Pyrimidine_nucleoside_triphosphate_metabolic_process


id: CL:2233
description: Pyrimidine nucleoside triphosphate biosynthetic process, and NUDIX hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2233_Pyrimidine_nucleoside_triphosphate_biosynthetic_process,_and_NUDIX_hydrolase


id: CL:2250
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2250_Adenylyl-_/_guanylyl_cyclase,_catalytic_domain,_and_Calcineurin-like_phosphoesterase_superfamily_domain

description:
  Adenylyl- / guanylyl cyclase, catalytic domain, and Calcineurin-like phosphoesterase superfamily domain


id: CL:2263
description: Sulfur metabolism, and S-adenosylmethionine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2263_Sulfur_metabolism,_and_S-adenosylmethionine_metabolic_process


id: CL:2264
description: Sulfur metabolism, and S-adenosylmethionine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2264_Sulfur_metabolism,_and_S-adenosylmethionine_metabolic_process


id: CL:2268
description: ABC-type sulfate transporter activity, and Thiosulphate/Sulfate-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2268_ABC-type_sulfate_transporter_activity,_and_Thiosulphate/Sulfate-binding_protein


id: CL:2279
description: Sulfate assimilation, and Inositol monophosphatase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2279_Sulfate_assimilation,_and_Inositol_monophosphatase-like


id: CL:2291
description: Cysteine biosynthetic process from serine
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2291_Cysteine_biosynthetic_process_from_serine


id: CL:2308
description: S-adenosylmethionine metabolic process, and Methionine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2308_S-adenosylmethionine_metabolic_process,_and_Methionine_metabolic_process


id: CL:2310
description: S-adenosylmethionine metabolic process, and DNA restriction-modification system
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2310_S-adenosylmethionine_metabolic_process,_and_DNA_restriction-modification_system


id: CL:2330
description: Homoserine metabolic process, and Methionine biosynthesis protein MetW
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2330_Homoserine_metabolic_process,_and_Methionine_biosynthesis_protein_MetW


id: CL:2346
description: Mixed, incl. Tetratricopeptide-like helical domain superfamily, and Peptidase S1C
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2346_Mixed,_incl._Tetratricopeptide-like_helical_domain_superfamily,_and_Peptidase_S1C


id: CL:2347
description: Mixed, incl. Tetratricopeptide-like helical domain superfamily, and Peptidase S1C
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2347_Mixed,_incl._Tetratricopeptide-like_helical_domain_superfamily,_and_Peptidase_S1C


id: CL:2348
description: Mixed, incl. TPR repeat, and WD40 repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2348_Mixed,_incl._TPR_repeat,_and_WD40_repeats


id: CL:2349
description: Mixed, incl. TPR repeat, and WD40 repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2349_Mixed,_incl._TPR_repeat,_and_WD40_repeats


id: CL:2350
description: Mixed, incl. TPR repeat, and WD40 repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2350_Mixed,_incl._TPR_repeat,_and_WD40_repeats


id: CL:2352
description: Mixed, incl. TPR repeat, and WD40 repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2352_Mixed,_incl._TPR_repeat,_and_WD40_repeat


id: CL:2354
description: Mixed, incl. TPR repeat, and WD40 repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2354_Mixed,_incl._TPR_repeat,_and_WD40_repeat


id: CL:2357
description: Mixed, incl. TPR repeat, and WD40 repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2357_Mixed,_incl._TPR_repeat,_and_WD40_repeat


id: CL:2360
description: Mixed, incl. WD40 repeat, and Ankyrin repeat-containing domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2360_Mixed,_incl._WD40_repeat,_and_Ankyrin_repeat-containing_domain_superfamily


id: CL:2362
description: Mixed, incl. WD40 repeat, and SNF2, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2362_Mixed,_incl._WD40_repeat,_and_SNF2,_N-terminal


id: CL:2363
description: Mixed, incl. WD40 repeat, and SNF2, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2363_Mixed,_incl._WD40_repeat,_and_SNF2,_N-terminal


id: CL:2364
description: WD40 repeat, and SNF2, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2364_WD40_repeat,_and_SNF2,_N-terminal


id: CL:2367
description: Anaphase-promoting complex subunit 4, WD40 domain, and Thoeris protein ThsB, TIR-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2367_Anaphase-promoting_complex_subunit_4,_WD40_domain,_and_Thoeris_protein_ThsB,_TIR-like_domain


id: CL:2384
description: RNA polymerase, and Zinc finger, SWIM-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2384_RNA_polymerase,_and_Zinc_finger,_SWIM-type


id: CL:2395
description: Mixed, incl. Histone deacetylase domain, and Histone methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2395_Mixed,_incl._Histone_deacetylase_domain,_and_Histone_methylation


id: CL:2406
description: Mixed, incl. GMC oxidoreductase, and WD repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2406_Mixed,_incl._GMC_oxidoreductase,_and_WD_repeat


id: CL:2422
description: Mixed, incl. ANK repeat, and Calcium ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2422_Mixed,_incl._ANK_repeat,_and_Calcium_ion_binding


id: CL:2424
description: ANK repeat, and Calcium ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2424_ANK_repeat,_and_Calcium_ion_binding


id: CL:2426
description: Mixed, incl. Calcium ion binding, and Leucine Rich repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2426_Mixed,_incl._Calcium_ion_binding,_and_Leucine_Rich_repeat


id: CL:2462
description: Tetratricopeptide repeats, and BRCT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2462_Tetratricopeptide_repeats,_and_BRCT_domain


id: CL:2466
description: Tetratricopeptide repeat 1, and Tetratricopeptide repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2466_Tetratricopeptide_repeat_1,_and_Tetratricopeptide_repeats


id: CL:2485
description: Mixed, incl. PPIC-type PPIASE domain, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2485_Mixed,_incl._PPIC-type_PPIASE_domain,_and_Tetratricopeptide_repeat


id: CL:2530
description: Mixed, incl. DNA-binding pseudobarrel domain superfamily, and Mismatch repair complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2530_Mixed,_incl._DNA-binding_pseudobarrel_domain_superfamily,_and_Mismatch_repair_complex


id: CL:2543
description: Mixed, incl. Sulfotransferase domain, and Cadherin-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2543_Mixed,_incl._Sulfotransferase_domain,_and_Cadherin-like_superfamily


id: CL:2555
description: Mixed, incl. Peptidase S1C, and Leucine-rich repeat domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2555_Mixed,_incl._Peptidase_S1C,_and_Leucine-rich_repeat_domain_superfamily


id: CL:2557
description: Mixed, incl. Leucine-rich repeat, and Leucine-rich repeat domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2557_Mixed,_incl._Leucine-rich_repeat,_and_Leucine-rich_repeat_domain_superfamily


id: CL:2558
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2558_Mixed,_incl._Leucine-rich_repeats,_outliers,_and_Inner_membrane_component_of_T3SS,_cytoplasmic_domain

description:
  Mixed, incl. Leucine-rich repeats, outliers, and Inner membrane component of T3SS, cytoplasmic domain


id: CL:2560
description: Mostly uncharacterized, incl. Inner membrane component of T3SS, cytoplasmic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2560_Mostly_uncharacterized,_incl._Inner_membrane_component_of_T3SS,_cytoplasmic_domain


id: CL:2583
description: Mixed, incl. Leucine Rich repeat, and tRNA 3-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2583_Mixed,_incl._Leucine_Rich_repeat,_and_tRNA_3-end_processing


id: CL:2585
description: Leucine Rich repeat, and Leucine-rich repeat domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2585_Leucine_Rich_repeat,_and_Leucine-rich_repeat_domain_superfamily


id: CL:2607
description: Peptidase S1C, and Glucose/Sorbosone dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2607_Peptidase_S1C,_and_Glucose/Sorbosone_dehydrogenase


id: CL:2641
description: Mixed, incl. O-methyltransferase domain, and Glucose/Sorbosone dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2641_Mixed,_incl._O-methyltransferase_domain,_and_Glucose/Sorbosone_dehydrogenase


id: CL:2656
description: Mixed, incl. Vitamin K-dependent gamma-carboxylase, and Carbonate dehydratase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2656_Mixed,_incl._Vitamin_K-dependent_gamma-carboxylase,_and_Carbonate_dehydratase_activity


id: CL:2667
description: Mixed, incl. ATPase, AAA-type, core, and ABC transporter transmembrane region
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2667_Mixed,_incl._ATPase,_AAA-type,_core,_and_ABC_transporter_transmembrane_region


id: CL:2669
description: Mixed, incl. ATPase, AAA-type, core, and ABC transporter transmembrane region
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2669_Mixed,_incl._ATPase,_AAA-type,_core,_and_ABC_transporter_transmembrane_region


id: CL:2670
description: Mixed, incl. ATPase, AAA-type, core, and ABC transporter transmembrane region
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2670_Mixed,_incl._ATPase,_AAA-type,_core,_and_ABC_transporter_transmembrane_region


id: CL:2671
description: Mixed, incl. ABC transporter transmembrane region, and ATPase, AAA-type, core
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2671_Mixed,_incl._ABC_transporter_transmembrane_region,_and_ATPase,_AAA-type,_core


id: CL:2673
description: Mixed, incl. ABC transporter transmembrane region, and ATPase, AAA-type, core
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2673_Mixed,_incl._ABC_transporter_transmembrane_region,_and_ATPase,_AAA-type,_core


id: CL:2674
description: ABC transporter transmembrane region, and ATPase, AAA-type, core
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2674_ABC_transporter_transmembrane_region,_and_ATPase,_AAA-type,_core


id: CL:2699
description: Mixed, incl. Rhodanese Homology Domain, and Response to superoxide
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2699_Mixed,_incl._Rhodanese_Homology_Domain,_and_Response_to_superoxide


id: CL:2702
description: Rhodanese Homology Domain, and Response to superoxide
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2702_Rhodanese_Homology_Domain,_and_Response_to_superoxide


id: CL:2732
description: Mixed, incl. Recombinase zinc beta ribbon domain, and Protein of unknown function DUF2997
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2732_Mixed,_incl._Recombinase_zinc_beta_ribbon_domain,_and_Protein_of_unknown_function_DUF2997


id: CL:2741
description: Mixed, incl. DNA strand exchange activity, and Protein of unknown function DUF2997
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2741_Mixed,_incl._DNA_strand_exchange_activity,_and_Protein_of_unknown_function_DUF2997


id: CL:2757
description: Mixed, incl. Recombinase zinc beta ribbon domain, and Protein of unknown function DUF2997
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2757_Mixed,_incl._Recombinase_zinc_beta_ribbon_domain,_and_Protein_of_unknown_function_DUF2997


id: CL:2768
description: Mixed, incl. Glycerophospholipid metabolism, and Iron ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2768_Mixed,_incl._Glycerophospholipid_metabolism,_and_Iron_ion_binding


id: CL:2769
description: Mixed, incl. Glycerophospholipid metabolism, and Thioesterase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2769_Mixed,_incl._Glycerophospholipid_metabolism,_and_Thioesterase_domain


id: CL:2770
description: Mixed, incl. Glycerophospholipid metabolism, and Thioesterase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2770_Mixed,_incl._Glycerophospholipid_metabolism,_and_Thioesterase_domain


id: CL:2771
description: Glycerophospholipid metabolism, and Thioesterase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2771_Glycerophospholipid_metabolism,_and_Thioesterase_domain


id: CL:2772
description: Glycerolipid metabolism, and Thioesterase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2772_Glycerolipid_metabolism,_and_Thioesterase_domain


id: CL:2788
description: Thioesterase domain, and Phospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2788_Thioesterase_domain,_and_Phospholipid_metabolism


id: CL:2797
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2797_Mixed,_incl._Ring_hydroxylating_alpha_subunit_(catalytic_domain),_and_Glycerophospholipid_metabolism

description:
  Mixed, incl. Ring hydroxylating alpha subunit (catalytic domain), and Glycerophospholipid metabolism


id: CL:2800
description: Mixed, incl. GMC oxidoreductase, and CDP-alcohol phosphatidyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2800_Mixed,_incl._GMC_oxidoreductase,_and_CDP-alcohol_phosphatidyltransferase


id: CL:2819
description: CinA, C-terminal, and C-terminal binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2819_CinA,_C-terminal,_and_C-terminal_binding_protein


id: CL:2829
description: Mixed, incl. Phosphatidylglycerol metabolic process, and Phenazine biosynthesis-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2829_Mixed,_incl._Phosphatidylglycerol_metabolic_process,_and_Phenazine_biosynthesis-like_protein


id: CL:2844
description: Mostly uncharacterized, incl. TIM-barrel domain, IGPS-like, and Antibiotic biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2844_Mostly_uncharacterized,_incl._TIM-barrel_domain,_IGPS-like,_and_Antibiotic_biosynthetic_process


id: CL:2846
description: Mixed, incl. TIM-barrel domain, IGPS-like, and Antibiotic biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2846_Mixed,_incl._TIM-barrel_domain,_IGPS-like,_and_Antibiotic_biosynthetic_process


id: CL:2849
description: Mixed, incl. Cytochrome P450, and AMP-binding enzyme C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2849_Mixed,_incl._Cytochrome_P450,_and_AMP-binding_enzyme_C-terminal_domain


id: CL:2850
description: Mixed, incl. Cytochrome P450, and Modified amino acid binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2850_Mixed,_incl._Cytochrome_P450,_and_Modified_amino_acid_binding


id: CL:2861
description: Mixed, incl. Cytochrome P450, and Glycosyltransferase family 28 C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2861_Mixed,_incl._Cytochrome_P450,_and_Glycosyltransferase_family_28_C-terminal_domain


id: CL:2877
description: TIM-barrel domain, IGPS-like, and UPF0261 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2877_TIM-barrel_domain,_IGPS-like,_and_UPF0261_domain


id: CL:2894
description: Mixed, incl. Protein of unknown function DUF3419, and Extrinsic component of membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2894_Mixed,_incl._Protein_of_unknown_function_DUF3419,_and_Extrinsic_component_of_membrane


id: CL:2896
description: Mixed, incl. Haem oxygenase-like, multi-helical, and Fatty acid desaturase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2896_Mixed,_incl._Haem_oxygenase-like,_multi-helical,_and_Fatty_acid_desaturase


id: CL:2915
description: Mixed, incl. tRNA methyltransferase activity, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2915_Mixed,_incl._tRNA_methyltransferase_activity,_and_Methyltransferase_domain


id: CL:2916
description: Mixed, incl. tRNA methyltransferase activity, and DUS-like, FMN-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2916_Mixed,_incl._tRNA_methyltransferase_activity,_and_DUS-like,_FMN-binding_domain


id: CL:2917
description: tRNA methyltransferase activity, and DUS-like, FMN-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2917_tRNA_methyltransferase_activity,_and_DUS-like,_FMN-binding_domain


id: CL:2932
description: Mixed, incl. Putative methyltransferase , and Caprolactam degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2932_Mixed,_incl._Putative_methyltransferase_,_and_Caprolactam_degradation


id: CL:2947
description: Mixed, incl. Methyltransferase FkbM, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2947_Mixed,_incl._Methyltransferase_FkbM,_and_Methyltransferase_domain


id: CL:2971
description: Signaling, and Flagellar assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2971_Signaling,_and_Flagellar_assembly


id: CL:2974
description: Phosphorelay signal transduction system, and Flagellar assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2974_Phosphorelay_signal_transduction_system,_and_Flagellar_assembly


id: CL:2975
description: Phosphorelay signal transduction system, and PAS-associated, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2975_Phosphorelay_signal_transduction_system,_and_PAS-associated,_C-terminal


id: CL:2977
description: Histidine kinase domain, and cheY-homologous receiver domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2977_Histidine_kinase_domain,_and_cheY-homologous_receiver_domain


id: CL:2979
description: Histidine kinase domain, and OmpR/PhoB-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2979_Histidine_kinase_domain,_and_OmpR/PhoB-type_DNA-binding_domain


id: CL:2980
description: Histidine kinase domain, and OmpR/PhoB-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2980_Histidine_kinase_domain,_and_OmpR/PhoB-type_DNA-binding_domain


id: CL:2982
description: Histidine kinase domain, and OmpR/PhoB-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2982_Histidine_kinase_domain,_and_OmpR/PhoB-type_DNA-binding_domain


id: CL:2985
description: Histidine kinase domain, and OmpR/PhoB-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2985_Histidine_kinase_domain,_and_OmpR/PhoB-type_DNA-binding_domain


id: CL:2988
description: Histidine kinase domain, and OmpR/PhoB-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2988_Histidine_kinase_domain,_and_OmpR/PhoB-type_DNA-binding_domain


id: CL:2990
description: Histidine kinase domain, and OmpR/PhoB-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2990_Histidine_kinase_domain,_and_OmpR/PhoB-type_DNA-binding_domain


id: CL:2992
description: Histidine kinase domain, and OmpR/PhoB-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2992_Histidine_kinase_domain,_and_OmpR/PhoB-type_DNA-binding_domain


id: CL:2994
description: Histidine kinase domain, and GGDEF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2994_Histidine_kinase_domain,_and_GGDEF_domain


id: CL:2996
description: PAS domain, and Signal transduction histidine kinase-related protein, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2996_PAS_domain,_and_Signal_transduction_histidine_kinase-related_protein,_C-terminal


id: CL:2998
description: PAS domain, and Signal transduction histidine kinase-related protein, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:2998_PAS_domain,_and_Signal_transduction_histidine_kinase-related_protein,_C-terminal


id: CL:3000
description: PAS-associated, C-terminal, and Signal transduction histidine kinase-related protein, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3000_PAS-associated,_C-terminal,_and_Signal_transduction_histidine_kinase-related_protein,_C-terminal


id: CL:3003
description: PAS-associated, C-terminal, and Signal transduction histidine kinase-related protein, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3003_PAS-associated,_C-terminal,_and_Signal_transduction_histidine_kinase-related_protein,_C-terminal


id: CL:3006
description: PAS-associated, C-terminal, and Signal transduction histidine kinase-related protein, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3006_PAS-associated,_C-terminal,_and_Signal_transduction_histidine_kinase-related_protein,_C-terminal


id: CL:3011
description: PAS fold-4, and CheB methylesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3011_PAS_fold-4,_and_CheB_methylesterase


id: CL:3016
description: PAS fold-4, and CheB methylesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3016_PAS_fold-4,_and_CheB_methylesterase


id: CL:3019
description: CheB methylesterase, and PAS fold-3
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3019_CheB_methylesterase,_and_PAS_fold-3


id: CL:3144
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3144_Sigma-54_interaction_domain,_ATP-binding_site_2,_and_HAMP_(Histidine_kinases,_Adenylyl_cyclases,_Methyl_binding_proteins,_Phosphatases)_domain

description:
  Sigma-54 interaction domain, ATP-binding site 2, and HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain


id: CL:3170
description: Sigma-54 interaction domain, conserved site, and DNA binding HTH domain, Fis-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3170_Sigma-54_interaction_domain,_conserved_site,_and_DNA_binding_HTH_domain,_Fis-type


id: CL:3175
description: Transcription regulator complex, and DNA binding HTH domain, Fis-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3175_Transcription_regulator_complex,_and_DNA_binding_HTH_domain,_Fis-type


id: CL:3191
description: Mixed, incl. Flagellar assembly, and STAS domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3191_Mixed,_incl._Flagellar_assembly,_and_STAS_domain_superfamily


id: CL:3192
description: Mixed, incl. Flagellar assembly, and PPM-type phosphatase-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3192_Mixed,_incl._Flagellar_assembly,_and_PPM-type_phosphatase-like_domain


id: CL:3193
description: Flagellar assembly, and PPM-type phosphatase-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3193_Flagellar_assembly,_and_PPM-type_phosphatase-like_domain


id: CL:3197
description: Bacterial-type flagellum, and Bacterial-type flagellum organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3197_Bacterial-type_flagellum,_and_Bacterial-type_flagellum_organization


id: CL:3222
description: Bacterial-type flagellum assembly, and Bacterial flagellum biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3222_Bacterial-type_flagellum_assembly,_and_Bacterial_flagellum_biogenesis


id: CL:3234
description: Bacterial-type flagellum basal body, distal rod, and Flagella basal body rod protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3234_Bacterial-type_flagellum_basal_body,_distal_rod,_and_Flagella_basal_body_rod_protein


id: CL:3257
description: Bacterial chemotaxis, and RNA polymerase sigma-70
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3257_Bacterial_chemotaxis,_and_RNA_polymerase_sigma-70


id: CL:3271
description: PPM-type phosphatase-like domain, and STAS domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3271_PPM-type_phosphatase-like_domain,_and_STAS_domain_superfamily


id: CL:3272
description: Mixed, incl. PPM-type phosphatase-like domain, and GGDEF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3272_Mixed,_incl._PPM-type_phosphatase-like_domain,_and_GGDEF_domain


id: CL:3274
description: Mixed, incl. GGDEF domain, and EAL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3274_Mixed,_incl._GGDEF_domain,_and_EAL_domain


id: CL:3294
description: Protein serine kinase activity, and Anti-sigma factor antagonist activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3294_Protein_serine_kinase_activity,_and_Anti-sigma_factor_antagonist_activity


id: CL:3307
description: HD-GYP domain, and Diguanylate cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3307_HD-GYP_domain,_and_Diguanylate_cyclase_activity


id: CL:3319
description: Lipid transport, and Anti-sigma factor antagonist activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3319_Lipid_transport,_and_Anti-sigma_factor_antagonist_activity


id: CL:3333
description: Helix_turn_helix, Lux Regulon, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3333_Helix_turn_helix,_Lux_Regulon,_and_Histidine_kinase


id: CL:3351
description: Mixed, incl. Potassium transport, and Domain of unknown function (DUF4118)
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3351_Mixed,_incl._Potassium_transport,_and_Domain_of_unknown_function_(DUF4118)


id: CL:3413
description: Ubiquinone and other terpenoid-quinone biosynthesis, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3413_Ubiquinone_and_other_terpenoid-quinone_biosynthesis,_and_DNA_integration


id: CL:3415
description: Ubiquinone and other terpenoid-quinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3415_Ubiquinone_and_other_terpenoid-quinone_biosynthesis


id: CL:3416
description: UbiD decarboxylyase family, and 4-hydroxybenzoate octaprenyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3416_UbiD_decarboxylyase_family,_and_4-hydroxybenzoate_octaprenyltransferase_activity


id: CL:3446
description: Mixed, incl. Type II secretion system (T2SS), protein F, and Regulation of cell killing
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3446_Mixed,_incl._Type_II_secretion_system_(T2SS),_protein_F,_and_Regulation_of_cell_killing


id: CL:3448
description: Mixed, incl. Type II secretion system (T2SS), protein F, and Regulation of cell killing
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3448_Mixed,_incl._Type_II_secretion_system_(T2SS),_protein_F,_and_Regulation_of_cell_killing


id: CL:3449
description: Mixed, incl. Type II secretion system (T2SS), protein F, and Regulation of cell killing
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3449_Mixed,_incl._Type_II_secretion_system_(T2SS),_protein_F,_and_Regulation_of_cell_killing


id: CL:3452
description: Mixed, incl. Regulation of cell killing, and Type II secretion system (T2SS), protein F
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3452_Mixed,_incl._Regulation_of_cell_killing,_and_Type_II_secretion_system_(T2SS),_protein_F


id: CL:3454
description: Mixed, incl. Type II secretion system (T2SS), protein F, and Regulation of cell killing
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3454_Mixed,_incl._Type_II_secretion_system_(T2SS),_protein_F,_and_Regulation_of_cell_killing


id: CL:3456
description: Mixed, incl. Type II secretion system (T2SS), protein F, and Regulation of cell killing
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3456_Mixed,_incl._Type_II_secretion_system_(T2SS),_protein_F,_and_Regulation_of_cell_killing


id: CL:3458
description: Mixed, incl. Type II secretion system (T2SS), protein F, and Type II/IV secretion system protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3458_Mixed,_incl._Type_II_secretion_system_(T2SS),_protein_F,_and_Type_II/IV_secretion_system_protein


id: CL:3462
description: Type II secretion system (T2SS), protein F, and Type II/IV secretion system protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3462_Type_II_secretion_system_(T2SS),_protein_F,_and_Type_II/IV_secretion_system_protein


id: CL:3463
description: Mixed, incl. Type II secretion system (T2SS), protein F, and Regulation of cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3463_Mixed,_incl._Type_II_secretion_system_(T2SS),_protein_F,_and_Regulation_of_cell_division


id: CL:3465
description: Mixed, incl. Type II secretion system (T2SS), protein F, and Regulation of cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3465_Mixed,_incl._Type_II_secretion_system_(T2SS),_protein_F,_and_Regulation_of_cell_division


id: CL:3467
description: Mixed, incl. Regulation of cell division, and Pilus assembly, Flp-type CpaB
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3467_Mixed,_incl._Regulation_of_cell_division,_and_Pilus_assembly,_Flp-type_CpaB


id: CL:3479
description: Regulation of cell division, and Type II secretion system (T2SS), protein F
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3479_Regulation_of_cell_division,_and_Type_II_secretion_system_(T2SS),_protein_F


id: CL:3500
description: Mixed, incl. Pilus assembly, and Pilus assembly, Flp-type CpaB
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3500_Mixed,_incl._Pilus_assembly,_and_Pilus_assembly,_Flp-type_CpaB


id: CL:3552
description: Mixed, incl. Zinc-ribbon domain, and Lipid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3552_Mixed,_incl._Zinc-ribbon_domain,_and_Lipid_catabolic_process


id: CL:3564
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3564_Mixed,_incl._Phosphonate_and_phosphinate_metabolism,_and_D-isomer_specific_2-hydroxyacid_dehydrogenase,_NAD_binding_domain

description:
  Mixed, incl. Phosphonate and phosphinate metabolism, and D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain


id: CL:3580
description: Mixed, incl. Cation transport, and Iron dependent repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3580_Mixed,_incl._Cation_transport,_and_Iron_dependent_repressor


id: CL:3581
description: Mixed, incl. Metal ion transport, and P-type ATPase, subfamily IB
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3581_Mixed,_incl._Metal_ion_transport,_and_P-type_ATPase,_subfamily_IB


id: CL:3582
description: Mixed, incl. Iron dependent repressor, and Ferrous iron transporter FeoA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3582_Mixed,_incl._Iron_dependent_repressor,_and_Ferrous_iron_transporter_FeoA_domain


id: CL:3583
description: Mixed, incl. Iron dependent repressor, and Ferric-uptake regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3583_Mixed,_incl._Iron_dependent_repressor,_and_Ferric-uptake_regulator


id: CL:3587
description: ABC transporter, TroCD-like, and Ferric-uptake regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3587_ABC_transporter,_TroCD-like,_and_Ferric-uptake_regulator


id: CL:3604
description: Mixed, incl. Ferrous iron transporter FeoA domain, and Nucleoside recognition
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3604_Mixed,_incl._Ferrous_iron_transporter_FeoA_domain,_and_Nucleoside_recognition


id: CL:3615
description: Mixed, incl. P-type ATPase, subfamily IB, and Heavy-metal-associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3615_Mixed,_incl._P-type_ATPase,_subfamily_IB,_and_Heavy-metal-associated_domain


id: CL:3617
description: Heavy metal-associated domain, HMA, and Cation efflux family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3617_Heavy_metal-associated_domain,_HMA,_and_Cation_efflux_family


id: CL:3619
description: P-type ATPase, subfamily IB, and Heavy-metal-associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3619_P-type_ATPase,_subfamily_IB,_and_Heavy-metal-associated_domain


id: CL:3646
description: Mixed, incl. Cation/H+ exchanger, and Magnesium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3646_Mixed,_incl._Cation/H+_exchanger,_and_Magnesium_ion_transport


id: CL:3648
description: Cation/H+ exchanger, and Magnesium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3648_Cation/H+_exchanger,_and_Magnesium_ion_transport


id: CL:3670
description: Mixed, incl. carboxyl-O-methyltransferase activity, and Antiporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3670_Mixed,_incl._carboxyl-O-methyltransferase_activity,_and_Antiporter_activity


id: CL:3680
description: Mixed, incl. Phosphate ion transport, and Folate biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3680_Mixed,_incl._Phosphate_ion_transport,_and_Folate_biosynthesis


id: CL:3681
description: Phosphate ion transport, and Folate biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3681_Phosphate_ion_transport,_and_Folate_biosynthesis


id: CL:3682
description: Phosphate ion transport, and Polyphosphate kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3682_Phosphate_ion_transport,_and_Polyphosphate_kinase_activity


id: CL:3703
description: Queuosine metabolic process, and PhoD-like phosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3703_Queuosine_metabolic_process,_and_PhoD-like_phosphatase


id: CL:3705
description: PhoD-like phosphatase, and 6-pyruvoyl tetrahydropterin synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3705_PhoD-like_phosphatase,_and_6-pyruvoyl_tetrahydropterin_synthase


id: CL:3723
description: Mixed, incl. Glycerophosphodiester phosphodiesterase domain, and Aquaporin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3723_Mixed,_incl._Glycerophosphodiester_phosphodiesterase_domain,_and_Aquaporin-like


id: CL:3725
description: Glycerophosphodiester phosphodiesterase domain, and Alditol phosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3725_Glycerophosphodiester_phosphodiesterase_domain,_and_Alditol_phosphate_metabolic_process


id: CL:3728
description: Glycerophosphodiester phosphodiesterase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3728_Glycerophosphodiester_phosphodiesterase_domain


id: CL:3763
description: Mixed, incl. Prosthetic group metabolic process, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3763_Mixed,_incl._Prosthetic_group_metabolic_process,_and_Nitrogen_metabolism


id: CL:3764
description: Mixed, incl. Prosthetic group metabolic process, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3764_Mixed,_incl._Prosthetic_group_metabolic_process,_and_Nitrogen_metabolism


id: CL:3765
description: Mixed, incl. Prosthetic group metabolic process, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3765_Mixed,_incl._Prosthetic_group_metabolic_process,_and_Nitrogen_metabolism


id: CL:3766
description: Mixed, incl. Prosthetic group metabolic process, and Molybdenum
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3766_Mixed,_incl._Prosthetic_group_metabolic_process,_and_Molybdenum


id: CL:3768
description: Prosthetic group metabolic process, and Molybdopterin oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3768_Prosthetic_group_metabolic_process,_and_Molybdopterin_oxidoreductase


id: CL:3770
description: Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3770_Prosthetic_group_metabolic_process


id: CL:3787
description: Molybdopterin oxidoreductase, and Anaerobic respiration
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3787_Molybdopterin_oxidoreductase,_and_Anaerobic_respiration


id: CL:3798
description: Mixed, incl. Molybdate ion transport, and Molybdate/tungstate binding, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3798_Mixed,_incl._Molybdate_ion_transport,_and_Molybdate/tungstate_binding,_C-terminal


id: CL:3828
description: Mixed, incl. Nitrate transport ATP-binding subunit C/D, and MetI-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3828_Mixed,_incl._Nitrate_transport_ATP-binding_subunit_C/D,_and_MetI-like_superfamily


id: CL:3831
description: Mixed, incl. Nitrate transport ATP-binding subunit C/D, and MetI-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3831_Mixed,_incl._Nitrate_transport_ATP-binding_subunit_C/D,_and_MetI-like_superfamily


id: CL:3854
description: Mixed, incl. Iron-sulfur cluster assembly, and Aminotransferase class V domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3854_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Aminotransferase_class_V_domain


id: CL:3856
description: Iron-sulfur cluster assembly, and Aminotransferase class V domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3856_Iron-sulfur_cluster_assembly,_and_Aminotransferase_class_V_domain


id: CL:3857
description: Iron-sulfur cluster assembly, and Aminotransferase class V domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3857_Iron-sulfur_cluster_assembly,_and_Aminotransferase_class_V_domain


id: CL:3859
description: Cysteine desulfurase, SufS, and SUF system FeS cluster assembly, SufBD
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3859_Cysteine_desulfurase,_SufS,_and_SUF_system_FeS_cluster_assembly,_SufBD


id: CL:3877
description: Iron-sulfur cluster assembly, and 2Fe-2S ferredoxin-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3877_Iron-sulfur_cluster_assembly,_and_2Fe-2S_ferredoxin-like_superfamily


id: CL:3904
description: Mixed, incl. Methyltransferase type 11, and Ubiquinone and other terpenoid-quinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3904_Mixed,_incl._Methyltransferase_type_11,_and_Ubiquinone_and_other_terpenoid-quinone_biosynthesis


id: CL:3906
description: Methyltransferase type 11, and Bacteriocin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3906_Methyltransferase_type_11,_and_Bacteriocin_metabolic_process


id: CL:3908
description: Ubiquinone and other terpenoid-quinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3908_Ubiquinone_and_other_terpenoid-quinone_biosynthesis


id: CL:3942
description: Mixed, incl. Protein transport, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3942_Mixed,_incl._Protein_transport,_and_Lipopolysaccharide_biosynthesis


id: CL:3943
description: Mixed, incl. Protein transport, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3943_Mixed,_incl._Protein_transport,_and_Lipopolysaccharide_biosynthesis


id: CL:3945
description: Mixed, incl. Protein transport, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3945_Mixed,_incl._Protein_transport,_and_Lipopolysaccharide_biosynthesis


id: CL:3946
description: Mixed, incl. Protein transport, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3946_Mixed,_incl._Protein_transport,_and_Lipopolysaccharide_biosynthesis


id: CL:3947
description: Mixed, incl. Protein transport, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3947_Mixed,_incl._Protein_transport,_and_Lipopolysaccharide_biosynthesis


id: CL:3949
description: Lipopolysaccharide biosynthesis, and MotA/TolQ/ExbB proton channel
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3949_Lipopolysaccharide_biosynthesis,_and_MotA/TolQ/ExbB_proton_channel


id: CL:3952
description: Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3952_Lipopolysaccharide_biosynthesis


id: CL:3953
description: Lipopolysaccharide biosynthesis, and SIS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3953_Lipopolysaccharide_biosynthesis,_and_SIS_domain


id: CL:3977
description: MotA/TolQ/ExbB proton channel, and Biopolymer transport protein ExbD/TolR
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3977_MotA/TolQ/ExbB_proton_channel,_and_Biopolymer_transport_protein_ExbD/TolR


id: CL:3994
description: Mixed, incl. Biopolymer transport protein ExbD/TolR, and MotA/TolQ/ExbB proton channel
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3994_Mixed,_incl._Biopolymer_transport_protein_ExbD/TolR,_and_MotA/TolQ/ExbB_proton_channel


id: CL:3995
description: Mixed, incl. Biopolymer transport protein ExbD/TolR, and NPCBM/NEW2 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3995_Mixed,_incl._Biopolymer_transport_protein_ExbD/TolR,_and_NPCBM/NEW2_domain


id: CL:3997
description: Mixed, incl. Biopolymer transport protein ExbD/TolR, and Glycosaminoglycan binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:3997_Mixed,_incl._Biopolymer_transport_protein_ExbD/TolR,_and_Glycosaminoglycan_binding


id: CL:4022
description: Mixed, incl. Biopolymer transport protein ExbD/TolR, and Solute-binding protein family 5
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4022_Mixed,_incl._Biopolymer_transport_protein_ExbD/TolR,_and_Solute-binding_protein_family_5


id: CL:4038
description: Mixed, incl. RNA-DNA hybrid ribonuclease activity, and RNA 3-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4038_Mixed,_incl._RNA-DNA_hybrid_ribonuclease_activity,_and_RNA_3-end_processing


id: CL:4048
description: Mixed, incl. Lipoprotein metabolic process, and BON domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4048_Mixed,_incl._Lipoprotein_metabolic_process,_and_BON_domain


id: CL:4059
description: Peptidase S49, SppA, and Cellular response to pH
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4059_Peptidase_S49,_SppA,_and_Cellular_response_to_pH


id: CL:4068
description: Mixed, incl. Protein-L-isoaspartate(D-aspartate) O-methyltransferase, and Sodium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4068_Mixed,_incl._Protein-L-isoaspartate(D-aspartate)_O-methyltransferase,_and_Sodium_ion_transport


id: CL:4069
description: Mixed, incl. Sodium ion transport, and Protein of unknown function DUF1579
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4069_Mixed,_incl._Sodium_ion_transport,_and_Protein_of_unknown_function_DUF1579


id: CL:4080
description: Mixed, incl. LSM domain superfamily, and Protein-L-isoaspartate(D-aspartate) O-methyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4080_Mixed,_incl._LSM_domain_superfamily,_and_Protein-L-isoaspartate(D-aspartate)_O-methyltransferase


id: CL:4089
description: Mixed, incl. Protein lipoylation, and rRNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4089_Mixed,_incl._Protein_lipoylation,_and_rRNA_catabolic_process


id: CL:4091
description: Mixed, incl. Protein lipoylation, and Modified amino acid binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4091_Mixed,_incl._Protein_lipoylation,_and_Modified_amino_acid_binding


id: CL:4114
description: Mixed, incl. rRNA methyltransferase activity, and Peptidase M32, carboxypeptidase Taq
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4114_Mixed,_incl._rRNA_methyltransferase_activity,_and_Peptidase_M32,_carboxypeptidase_Taq


id: CL:4115
description: Mixed, incl. rRNA methyltransferase activity, and Cytokinesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4115_Mixed,_incl._rRNA_methyltransferase_activity,_and_Cytokinesis


id: CL:4117
description: Mixed, incl. HDIG domain, and Bacterial nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4117_Mixed,_incl._HDIG_domain,_and_Bacterial_nucleoid


id: CL:4131
description: S-adenosylmethionine-dependent methyltransferase, and rRNA (guanine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4131_S-adenosylmethionine-dependent_methyltransferase,_and_rRNA_(guanine)_methyltransferase_activity


id: CL:4144
description: Mixed, incl. Peptidase M32, carboxypeptidase Taq, and PIN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4144_Mixed,_incl._Peptidase_M32,_carboxypeptidase_Taq,_and_PIN_domain


id: CL:4146
description: Peptidase M32, carboxypeptidase Taq, and Glyoxalase/fosfomycin resistance/dioxygenase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4146_Peptidase_M32,_carboxypeptidase_Taq,_and_Glyoxalase/fosfomycin_resistance/dioxygenase_domain


id: CL:4159
description: Mixed, incl. PIN domain, and Peptidase family M50
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4159_Mixed,_incl._PIN_domain,_and_Peptidase_family_M50


id: CL:4169
description: Mixed, incl. Glycosyltransferase, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4169_Mixed,_incl._Glycosyltransferase,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:4170
description: Mixed, incl. Glycosyltransferase, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4170_Mixed,_incl._Glycosyltransferase,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:4171
description: Mixed, incl. Glycosyltransferase, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4171_Mixed,_incl._Glycosyltransferase,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:4173
description: Mixed, incl. Polysaccharide biosynthetic process, and Glycosyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4173_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Glycosyltransferase


id: CL:4174
description: Mixed, incl. Polysaccharide biosynthetic process, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4174_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Glycosyl_transferases_group_1


id: CL:4176
description: Mixed, incl. Polysaccharide biosynthetic process, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4176_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Glycosyl_transferases_group_1


id: CL:4177
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4177_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyltransferase


id: CL:4178
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4178_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyltransferase_subfamily_4-like,_N-terminal_domain

description:
  Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyltransferase subfamily 4-like, N-terminal domain


id: CL:4179
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Bacterial sugar transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4179_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Bacterial_sugar_transferase


id: CL:4180
description: Mixed, incl. DegT/DnrJ/EryC1/StrS aminotransferase, and Bacterial sugar transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4180_Mixed,_incl._DegT/DnrJ/EryC1/StrS_aminotransferase,_and_Bacterial_sugar_transferase


id: CL:4182
description: Mixed, incl. NAD(P)-binding domain, and DegT/DnrJ/EryC1/StrS aminotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4182_Mixed,_incl._NAD(P)-binding_domain,_and_DegT/DnrJ/EryC1/StrS_aminotransferase


id: CL:4183
description: Mixed, incl. UDP-N-acetylglucosamine 2-epimerase, and Acylneuraminate cytidylyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4183_Mixed,_incl._UDP-N-acetylglucosamine_2-epimerase,_and_Acylneuraminate_cytidylyltransferase


id: CL:4194
description: NADP+ binding, and DegT/DnrJ/EryC1/StrS aminotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4194_NADP+_binding,_and_DegT/DnrJ/EryC1/StrS_aminotransferase


id: CL:4210
description: Mixed, incl. Bacterial sugar transferase, and Glycosyltransferase like family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4210_Mixed,_incl._Bacterial_sugar_transferase,_and_Glycosyltransferase_like_family_2


id: CL:4212
description: Bacterial sugar transferase, and Exopolysaccharide synthesis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4212_Bacterial_sugar_transferase,_and_Exopolysaccharide_synthesis_protein


id: CL:4234
description: O-Antigen nucleotide sugar biosynthesis, and Glycosyltransferase Family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4234_O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyltransferase_Family_4


id: CL:4236
description: Glycosyltransferase Family 4, and Galactose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4236_Glycosyltransferase_Family_4,_and_Galactose_metabolism


id: CL:4254
description: Polyketide sugar unit biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4254_Polyketide_sugar_unit_biosynthesis


id: CL:4273
description: Glycosyl transferase 4-like domain, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4273_Glycosyl_transferase_4-like_domain,_and_Acetyltransferase_(GNAT)_domain


id: CL:4285
description: Mixed, incl. Glycosyl transferases group 1, and ABC transporter, teichoic acids export TagH-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4285_Mixed,_incl._Glycosyl_transferases_group_1,_and_ABC_transporter,_teichoic_acids_export_TagH-like


id: CL:4287
description: Mixed, incl. ABC transporter, teichoic acids export TagH-like, and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4287_Mixed,_incl._ABC_transporter,_teichoic_acids_export_TagH-like,_and_ABC-2_transporter


id: CL:4288
description: Mixed, incl. Hexapeptide repeat of succinyl-transferase, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4288_Mixed,_incl._Hexapeptide_repeat_of_succinyl-transferase,_and_Methyltransferase_domain


id: CL:4301
description: ABC transporter, teichoic acids export TagH-like, and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4301_ABC_transporter,_teichoic_acids_export_TagH-like,_and_ABC-2_transporter


id: CL:4318
description: Glycosyl transferases group 1, and Mycolic acid cyclopropane synthetase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4318_Glycosyl_transferases_group_1,_and_Mycolic_acid_cyclopropane_synthetase


id: CL:4334
description: Nucleotidyl transferase, and HAD hydrolase, subfamily IA
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4334_Nucleotidyl_transferase,_and_HAD_hydrolase,_subfamily_IA


id: CL:4351
description: NodB homology domain, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4351_NodB_homology_domain,_and_Glycosyl_transferase_family_2


id: CL:4353
description: Mixed, incl. NodB homology domain, and Ceramide glucosyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4353_Mixed,_incl._NodB_homology_domain,_and_Ceramide_glucosyltransferase


id: CL:438
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:438_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:4380
description: Glycosyltransferase 2-like, and Glycosyltransferase RgtA/B/C/D-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4380_Glycosyltransferase_2-like,_and_Glycosyltransferase_RgtA/B/C/D-like


id: CL:4381
description: Glycosyl transferase family 2, and Glycosyltransferase RgtA/B/C/D-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4381_Glycosyl_transferase_family_2,_and_Glycosyltransferase_RgtA/B/C/D-like


id: CL:4383
description: Mixed, incl. Glycosyltransferase RgtA/B/C/D-like, and lipid-A-disaccharide synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4383_Mixed,_incl._Glycosyltransferase_RgtA/B/C/D-like,_and_lipid-A-disaccharide_synthase_activity


id: CL:439
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:439_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:4401
description: Mixed, incl. Response to iron ion, and O-methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4401_Mixed,_incl._Response_to_iron_ion,_and_O-methyltransferase_domain


id: CL:441
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:441_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:4410
description: Mixed, incl. 4Fe-4S single cluster domain, and Lysylphosphatidylglycerol synthase TM region
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4410_Mixed,_incl._4Fe-4S_single_cluster_domain,_and_Lysylphosphatidylglycerol_synthase_TM_region


id: CL:442
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:442_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:4420
description: Mixed, incl. Terpenoid metabolic process, and Methyltransferase domain 25
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4420_Mixed,_incl._Terpenoid_metabolic_process,_and_Methyltransferase_domain_25


id: CL:4421
description: Mixed, incl. Terpenoid metabolic process, and Methyltransferase domain 25
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4421_Mixed,_incl._Terpenoid_metabolic_process,_and_Methyltransferase_domain_25


id: CL:4423
description: Mixed, incl. Terpenoid metabolic process, and ABC-2 type transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4423_Mixed,_incl._Terpenoid_metabolic_process,_and_ABC-2_type_transporter


id: CL:4424
description: Mixed, incl. Lipid droplet, and Squalene/phytoene synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4424_Mixed,_incl._Lipid_droplet,_and_Squalene/phytoene_synthase


id: CL:4426
description: Lipid droplet, and Squalene/phytoene synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4426_Lipid_droplet,_and_Squalene/phytoene_synthase


id: CL:4428
description: Sesquiterpenoid and triterpenoid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4428_Sesquiterpenoid_and_triterpenoid_biosynthesis


id: CL:443
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:443_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:4455
description: Mixed, incl. Carotenoid metabolic process, and ABC-2 type transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4455_Mixed,_incl._Carotenoid_metabolic_process,_and_ABC-2_type_transporter


id: CL:4458
description: Carotenoid biosynthesis, and Phosphate acyltransferases
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4458_Carotenoid_biosynthesis,_and_Phosphate_acyltransferases


id: CL:447
description: Translation, and Proton-transporting ATP synthase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:447_Translation,_and_Proton-transporting_ATP_synthase_complex


id: CL:4486
description: Mixed, incl. Virulence factor BrkB, and Amidohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4486_Mixed,_incl._Virulence_factor_BrkB,_and_Amidohydrolase


id: CL:449
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:449_Ribosome,_and_Translation_regulator_activity


id: CL:4497
description: Mixed, incl. Alcohol dehydrogenase GroES-associated, and SMI1 / KNR4 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4497_Mixed,_incl._Alcohol_dehydrogenase_GroES-associated,_and_SMI1_/_KNR4_family


id: CL:4507
description: Mixed, incl. Sulfatase, N-terminal, and Fatty acid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4507_Mixed,_incl._Sulfatase,_N-terminal,_and_Fatty_acid_biosynthesis


id: CL:4508
description: Mixed, incl. Sulfatase, N-terminal, and Sulfatase-modifying factor enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4508_Mixed,_incl._Sulfatase,_N-terminal,_and_Sulfatase-modifying_factor_enzyme


id: CL:4509
description: Mixed, incl. Sulfatase, N-terminal, and Sulfatase-modifying factor enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4509_Mixed,_incl._Sulfatase,_N-terminal,_and_Sulfatase-modifying_factor_enzyme


id: CL:451
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:451_Ribosome,_and_Translation_regulator_activity


id: CL:4510
description: Sulfatase, N-terminal, and Sulfatase-modifying factor enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4510_Sulfatase,_N-terminal,_and_Sulfatase-modifying_factor_enzyme


id: CL:4512
description: Sulfatase, N-terminal, and Sulfatase-modifying factor enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4512_Sulfatase,_N-terminal,_and_Sulfatase-modifying_factor_enzyme


id: CL:4514
description: Sulfatase, N-terminal, and Sulfatase-modifying factor enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4514_Sulfatase,_N-terminal,_and_Sulfatase-modifying_factor_enzyme


id: CL:4515
description: Sulfatase, N-terminal, and Sulfatase-modifying factor enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4515_Sulfatase,_N-terminal,_and_Sulfatase-modifying_factor_enzyme


id: CL:4517
description: Sulfatase, N-terminal, and Sulfatase-modifying factor enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4517_Sulfatase,_N-terminal,_and_Sulfatase-modifying_factor_enzyme


id: CL:4520
description: Sulfatase, and Sulfatase-modifying factor enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4520_Sulfatase,_and_Sulfatase-modifying_factor_enzyme


id: CL:4521
description: Sulfatase, N-terminal, and Sulfatase-modifying factor enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4521_Sulfatase,_N-terminal,_and_Sulfatase-modifying_factor_enzyme


id: CL:453
description: Ribosome, and Translational elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:453_Ribosome,_and_Translational_elongation


id: CL:4537
description: Sulfatase, conserved site, and EF hand
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4537_Sulfatase,_conserved_site,_and_EF_hand


id: CL:454
description: Ribosome, and Translational elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:454_Ribosome,_and_Translational_elongation


id: CL:457
description: Ribosome, and Translational elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:457_Ribosome,_and_Translational_elongation


id: CL:4588
description: Protein of unknown function DUF3500, and Sulfatase-modifying factor enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4588_Protein_of_unknown_function_DUF3500,_and_Sulfatase-modifying_factor_enzyme


id: CL:4619
description: Mixed, incl. Ligand-gated channel activity, and L-serine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4619_Mixed,_incl._Ligand-gated_channel_activity,_and_L-serine_biosynthetic_process


id: CL:4620
description: Ligand-gated channel activity, and L-serine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4620_Ligand-gated_channel_activity,_and_L-serine_biosynthetic_process


id: CL:4632
description: Mixed, incl. Domain of unknown function DUF58, and Magnesium chelatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4632_Mixed,_incl._Domain_of_unknown_function_DUF58,_and_Magnesium_chelatase_activity


id: CL:4647
description: Mixed, incl. Radical SAM superfamily, and Elp3/MiaA/NifB-like, radical SAM core domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4647_Mixed,_incl._Radical_SAM_superfamily,_and_Elp3/MiaA/NifB-like,_radical_SAM_core_domain


id: CL:4658
description: Mixed, incl. Fatty acid biosynthesis, and Short-chain dehydrogenase/reductase SDR
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4658_Mixed,_incl._Fatty_acid_biosynthesis,_and_Short-chain_dehydrogenase/reductase_SDR


id: CL:4660
description: Fatty acid biosynthesis, and Short-chain dehydrogenase/reductase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4660_Fatty_acid_biosynthesis,_and_Short-chain_dehydrogenase/reductase,_conserved_site


id: CL:4662
description: Fatty acid biosynthesis, and Short-chain dehydrogenase/reductase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4662_Fatty_acid_biosynthesis,_and_Short-chain_dehydrogenase/reductase,_conserved_site


id: CL:4663
description: Fatty acid biosynthesis, and Short-chain dehydrogenase/reductase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4663_Fatty_acid_biosynthesis,_and_Short-chain_dehydrogenase/reductase,_conserved_site


id: CL:4672
description: acetyl-CoA carboxylase complex, and Biotin carboxylation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4672_acetyl-CoA_carboxylase_complex,_and_Biotin_carboxylation_domain


id: CL:4691
description: Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4691_Beta-hydroxydecanoyl_thiol_ester_dehydrase,_FabA/FabZ


id: CL:4716
description: Short-chain dehydrogenase/reductase, conserved site, and Alcohol dehydrogenase GroES-associated
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4716_Short-chain_dehydrogenase/reductase,_conserved_site,_and_Alcohol_dehydrogenase_GroES-associated


id: CL:4719
description: Short-chain dehydrogenase/reductase, conserved site, and Benzoate degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4719_Short-chain_dehydrogenase/reductase,_conserved_site,_and_Benzoate_degradation


id: CL:4746
description: Mixed, incl. K Homology domain, type 1, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4746_Mixed,_incl._K_Homology_domain,_type_1,_and_Sporulation


id: CL:475
description: Cytosolic large ribosomal subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:475_Cytosolic_large_ribosomal_subunit


id: CL:477
description: Cytoplasmic translation, and Ribosomal small subunit assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:477_Cytoplasmic_translation,_and_Ribosomal_small_subunit_assembly


id: CL:4778
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4778_Mixed,_incl._Proteasomal_protein_catabolic_process,_and_3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III

description:
  Mixed, incl. Proteasomal protein catabolic process, and 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III


id: CL:4780
description: Mixed, incl. 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, and Epoxide hydrolase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4780_Mixed,_incl._3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III,_and_Epoxide_hydrolase-like


id: CL:4811
description: Mixed, incl. Starch and sucrose metabolism, and Six-hairpin glycosidase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4811_Mixed,_incl._Starch_and_sucrose_metabolism,_and_Six-hairpin_glycosidase-like_superfamily


id: CL:4812
description: Mixed, incl. Starch and sucrose metabolism, and Six-hairpin glycosidase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4812_Mixed,_incl._Starch_and_sucrose_metabolism,_and_Six-hairpin_glycosidase-like_superfamily


id: CL:4813
description: Mixed, incl. Starch and sucrose metabolism, and Six-hairpin glycosidase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4813_Mixed,_incl._Starch_and_sucrose_metabolism,_and_Six-hairpin_glycosidase-like_superfamily


id: CL:4814
description: Mixed, incl. Starch and sucrose metabolism, and Six-hairpin glycosidase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4814_Mixed,_incl._Starch_and_sucrose_metabolism,_and_Six-hairpin_glycosidase-like_superfamily


id: CL:4816
description: Starch and sucrose metabolism, and Six-hairpin glycosidase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4816_Starch_and_sucrose_metabolism,_and_Six-hairpin_glycosidase-like_superfamily


id: CL:4818
description: Starch and sucrose metabolism, and Six-hairpin glycosidase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4818_Starch_and_sucrose_metabolism,_and_Six-hairpin_glycosidase-like_superfamily


id: CL:4821
description: Starch and sucrose metabolism, and Amino acid/polyamine transporter I
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4821_Starch_and_sucrose_metabolism,_and_Amino_acid/polyamine_transporter_I


id: CL:4823
description: Glycogen metabolic process, and Alpha-amylase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4823_Glycogen_metabolic_process,_and_Alpha-amylase_domain


id: CL:4825
description: Glycogen metabolic process, and Alpha-amylase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4825_Glycogen_metabolic_process,_and_Alpha-amylase_domain


id: CL:4841
description: Glycogen biosynthesis, and Carbohydrate phosphorylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4841_Glycogen_biosynthesis,_and_Carbohydrate_phosphorylase


id: CL:4863
description: Amino acid/polyamine transporter I, and Alpha amylase, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4863_Amino_acid/polyamine_transporter_I,_and_Alpha_amylase,_catalytic_domain


id: CL:4892
description: Iron-type alcohol dehydrogenase-like, and Bacterial microcompartment
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4892_Iron-type_alcohol_dehydrogenase-like,_and_Bacterial_microcompartment


id: CL:4893
description: Iron-type alcohol dehydrogenase-like, and Cinnamyl alcohol dehydrogenase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4893_Iron-type_alcohol_dehydrogenase-like,_and_Cinnamyl_alcohol_dehydrogenase-like


id: CL:4910
description: EutN/Ccml superfamily, and CcmK-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4910_EutN/Ccml_superfamily,_and_CcmK-like_superfamily


id: CL:4921
description: Mixed, incl. Sodium Bile acid symporter family, and Phosphoglucosamine mutase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4921_Mixed,_incl._Sodium_Bile_acid_symporter_family,_and_Phosphoglucosamine_mutase_activity


id: CL:4935
description: Mixed, incl. HAD hydrolase, subfamily IA, and Phosphotransferase enzyme family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4935_Mixed,_incl._HAD_hydrolase,_subfamily_IA,_and_Phosphotransferase_enzyme_family


id: CL:494
description: Cytosolic large ribosomal subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:494_Cytosolic_large_ribosomal_subunit


id: CL:4955
description: Mixed, incl. Amino acid transport, and CBS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4955_Mixed,_incl._Amino_acid_transport,_and_CBS_domain


id: CL:4957
description: Mixed, incl. Amino acid transport, and Thiamine pyrophosphate enzyme, TPP-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4957_Mixed,_incl._Amino_acid_transport,_and_Thiamine_pyrophosphate_enzyme,_TPP-binding


id: CL:4960
description: Branched-chain amino acid transport, and ABC transporter, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4960_Branched-chain_amino_acid_transport,_and_ABC_transporter,_BtuC-like


id: CL:4981
description: Mixed, incl. AMP-binding enzyme, C-terminal domain superfamily, and PQQ-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4981_Mixed,_incl._AMP-binding_enzyme,_C-terminal_domain_superfamily,_and_PQQ-like_domain


id: CL:4992
description: Mixed, incl. DNA repair, and Macro domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4992_Mixed,_incl._DNA_repair,_and_Macro_domain


id: CL:4993
description: Mixed, incl. DNA repair, and DEAD/H associated
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4993_Mixed,_incl._DNA_repair,_and_DEAD/H_associated


id: CL:4995
description: Mixed, incl. Base excision repair, and Non-homologous end-joining
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4995_Mixed,_incl._Base_excision_repair,_and_Non-homologous_end-joining


id: CL:4997
description: Mixed, incl. Base excision repair, and Non-homologous end-joining
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4997_Mixed,_incl._Base_excision_repair,_and_Non-homologous_end-joining


id: CL:4998
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:4998_Mixed,_incl._Base-excision_repair,_and_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters

description:
  Mixed, incl. Base-excision repair, and Endodeoxyribonuclease activity, producing 5-phosphomonoesters


id: CL:5000
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5000_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity,_and_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters

description:
  DNA-(apurinic or apyrimidinic site) endonuclease activity, and Endodeoxyribonuclease activity, producing 5-phosphomonoesters


id: CL:5022
description: Mixed, incl. Non-homologous end-joining, and DEAD/H associated
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5022_Mixed,_incl._Non-homologous_end-joining,_and_DEAD/H_associated


id: CL:5053
description: HhH-GPD domain, and Phospholipase/Carboxylesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5053_HhH-GPD_domain,_and_Phospholipase/Carboxylesterase


id: CL:5071
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5071_Mixed,_incl._RNA_polymerase_binding,_and_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity

description:
  Mixed, incl. RNA polymerase binding, and methylated-DNA-[protein]-cysteine S-methyltransferase activity


id: CL:5083
description: Macro domain, and DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5083_Macro_domain,_and_DNA_polymerase_III,_clamp_loader_complex,_gamma/delta/delta_subunit,_C-terminal


id: CL:5099
description: Mostly uncharacterized, incl. Peroxidase activity, and Aldo/keto reductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5099_Mostly_uncharacterized,_incl._Peroxidase_activity,_and_Aldo/keto_reductase_family


id: CL:5100
description: Mostly uncharacterized, incl. Peroxidase activity, and Aldo/keto reductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5100_Mostly_uncharacterized,_incl._Peroxidase_activity,_and_Aldo/keto_reductase_family


id: CL:5101
description: Mostly uncharacterized, incl. Peroxidase activity, and Aldo/keto reductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5101_Mostly_uncharacterized,_incl._Peroxidase_activity,_and_Aldo/keto_reductase_family


id: CL:5103
description: Mixed, incl. Peroxidase activity, and Aldo/keto reductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5103_Mixed,_incl._Peroxidase_activity,_and_Aldo/keto_reductase_family


id: CL:5105
description: Mixed, incl. Peroxidase activity, and Aldo/keto reductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5105_Mixed,_incl._Peroxidase_activity,_and_Aldo/keto_reductase_family


id: CL:5106
description: Mixed, incl. Peroxidase activity, and Aldo/keto reductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5106_Mixed,_incl._Peroxidase_activity,_and_Aldo/keto_reductase_family


id: CL:5107
description: Mixed, incl. Peroxidase activity, and Aldo/keto reductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5107_Mixed,_incl._Peroxidase_activity,_and_Aldo/keto_reductase_family


id: CL:5109
description: Peroxidase activity, and DJ-1/PfpI
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5109_Peroxidase_activity,_and_DJ-1/PfpI


id: CL:5112
description: Catalase activity, and OsmC/Ohr family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5112_Catalase_activity,_and_OsmC/Ohr_family


id: CL:5145
description: Mixed, incl. Cell pole, and Coenzyme F420 binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5145_Mixed,_incl._Cell_pole,_and_Coenzyme_F420_binding


id: CL:5147
description: Coenzyme F420 binding, and Cell pole
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5147_Coenzyme_F420_binding,_and_Cell_pole


id: CL:5165
description: Universal stress protein A family, and Zinc-binding dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5165_Universal_stress_protein_A_family,_and_Zinc-binding_dehydrogenase


id: CL:5177
description: Mixed, incl. General stress protein 17M-like domain, and Virulence factor BrkB
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5177_Mixed,_incl._General_stress_protein_17M-like_domain,_and_Virulence_factor_BrkB


id: CL:5195
description: Mixed, incl. Response to radiation, and Steroid hydroxylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5195_Mixed,_incl._Response_to_radiation,_and_Steroid_hydroxylase_activity


id: CL:5208
description: Mixed, incl. BFD-like [2Fe-2S]-binding domain superfamily, and Iron ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5208_Mixed,_incl._BFD-like_[2Fe-2S]-binding_domain_superfamily,_and_Iron_ion_transport


id: CL:5210
description: Mixed, incl. Virulence factor BrkB
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5210_Mixed,_incl._Virulence_factor_BrkB


id: CL:5222
description: Mixed, incl. BFD-like [2Fe-2S]-binding domain superfamily, and Iron ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5222_Mixed,_incl._BFD-like_[2Fe-2S]-binding_domain_superfamily,_and_Iron_ion_transport


id: CL:5236
description: Mixed, incl. Mycolic acid cyclopropane synthase, and TspO/MBR family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5236_Mixed,_incl._Mycolic_acid_cyclopropane_synthase,_and_TspO/MBR_family


id: CL:5238
description: Mixed, incl. TspO/MBR family, and DapA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5238_Mixed,_incl._TspO/MBR_family,_and_DapA-like


id: CL:5257
description: Mixed, incl. Mycolic acid cyclopropane synthase, and Flavin containing amine oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5257_Mixed,_incl._Mycolic_acid_cyclopropane_synthase,_and_Flavin_containing_amine_oxidoreductase


id: CL:5285
description: Protein of unknown function DUF1501, and Domain of unknown function DUF1553
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5285_Protein_of_unknown_function_DUF1501,_and_Domain_of_unknown_function_DUF1553


id: CL:5286
description: Protein of unknown function DUF1501, and Domain of unknown function DUF1553
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5286_Protein_of_unknown_function_DUF1501,_and_Domain_of_unknown_function_DUF1553


id: CL:5288
description: Protein of unknown function DUF1501, and Domain of unknown function DUF1553
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5288_Protein_of_unknown_function_DUF1501,_and_Domain_of_unknown_function_DUF1553


id: CL:5290
description: Protein of unknown function DUF1501, and Domain of unknown function DUF1553
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5290_Protein_of_unknown_function_DUF1501,_and_Domain_of_unknown_function_DUF1553


id: CL:5292
description: Protein of unknown function DUF1501, and Domain of unknown function DUF1553
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5292_Protein_of_unknown_function_DUF1501,_and_Domain_of_unknown_function_DUF1553


id: CL:5294
description: Protein of unknown function DUF1501, and Domain of unknown function DUF1553
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5294_Protein_of_unknown_function_DUF1501,_and_Domain_of_unknown_function_DUF1553


id: CL:5296
description: Protein of unknown function (DUF1501), and Domain of unknown function DUF1553
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5296_Protein_of_unknown_function_(DUF1501),_and_Domain_of_unknown_function_DUF1553


id: CL:5297
description: Protein of unknown function (DUF1501), and Domain of unknown function DUF1553
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5297_Protein_of_unknown_function_(DUF1501),_and_Domain_of_unknown_function_DUF1553


id: CL:5299
description: Protein of unknown function (DUF1501), and Domain of unknown function DUF1553
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5299_Protein_of_unknown_function_(DUF1501),_and_Domain_of_unknown_function_DUF1553


id: CL:5301
description: Protein of unknown function (DUF1501), and Domain of unknown function DUF1553
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5301_Protein_of_unknown_function_(DUF1501),_and_Domain_of_unknown_function_DUF1553


id: CL:5302
description: Protein of unknown function (DUF1501), and Domain of unknown function DUF1553
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5302_Protein_of_unknown_function_(DUF1501),_and_Domain_of_unknown_function_DUF1553


id: CL:5303
description: Protein of unknown function (DUF1501), and Domain of unknown function DUF1553
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5303_Protein_of_unknown_function_(DUF1501),_and_Domain_of_unknown_function_DUF1553


id: CL:5304
description: Protein of unknown function (DUF1501), and Domain of unknown function DUF1553
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5304_Protein_of_unknown_function_(DUF1501),_and_Domain_of_unknown_function_DUF1553


id: CL:5305
description: Protein of unknown function (DUF1501), and Domain of unknown function DUF1553
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5305_Protein_of_unknown_function_(DUF1501),_and_Domain_of_unknown_function_DUF1553


id: CL:5306
description: Protein of unknown function (DUF1501), and Domain of unknown function DUF1553
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5306_Protein_of_unknown_function_(DUF1501),_and_Domain_of_unknown_function_DUF1553


id: CL:5307
description: Protein of unknown function (DUF1501), and Domain of unknown function DUF1553
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5307_Protein_of_unknown_function_(DUF1501),_and_Domain_of_unknown_function_DUF1553


id: CL:5308
description: Protein of unknown function (DUF1501), and Domain of unknown function DUF1553
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5308_Protein_of_unknown_function_(DUF1501),_and_Domain_of_unknown_function_DUF1553


id: CL:5309
description: Domain of unknown function DUF1553, and Protein of unknown function (DUF1501)
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5309_Domain_of_unknown_function_DUF1553,_and_Protein_of_unknown_function_(DUF1501)


id: CL:5311
description: Protein of unknown function (DUF1501), and Domain of unknown function DUF1553
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5311_Protein_of_unknown_function_(DUF1501),_and_Domain_of_unknown_function_DUF1553


id: CL:5328
description: Domain of unknown function DUF1553, and Protein of unknown function (DUF1501)
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5328_Domain_of_unknown_function_DUF1553,_and_Protein_of_unknown_function_(DUF1501)


id: CL:5344
description: Cytochrome C, Planctomycete-type, and Protein of unknown function (DUF1501)
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5344_Cytochrome_C,_Planctomycete-type,_and_Protein_of_unknown_function_(DUF1501)


id: CL:5353
description: Domain of unknown function DUF1553, and Protein of unknown function (DUF1501)
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5353_Domain_of_unknown_function_DUF1553,_and_Protein_of_unknown_function_(DUF1501)


id: CL:5355
description: Protein of unknown function (DUF1501), and Domain of unknown function DUF1553
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5355_Protein_of_unknown_function_(DUF1501),_and_Domain_of_unknown_function_DUF1553


id: CL:5371
description: Mixed, incl. LamG-like jellyroll fold, and EF hand
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5371_Mixed,_incl._LamG-like_jellyroll_fold,_and_EF_hand


id: CL:5384
description: Protein of unknown function (DUF1501), and Domain of unknown function DUF1553
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5384_Protein_of_unknown_function_(DUF1501),_and_Domain_of_unknown_function_DUF1553


id: CL:5386
description: Domain of unknown function DUF1553, and Protein of unknown function (DUF1501)
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5386_Domain_of_unknown_function_DUF1553,_and_Protein_of_unknown_function_(DUF1501)


id: CL:5402
description: Cytochrome C, Planctomycete-type, and Protein of unknown function (DUF1501)
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5402_Cytochrome_C,_Planctomycete-type,_and_Protein_of_unknown_function_(DUF1501)


id: CL:5411
description: Protein of unknown function (DUF1501), and Domain of unknown function DUF1553
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5411_Protein_of_unknown_function_(DUF1501),_and_Domain_of_unknown_function_DUF1553


id: CL:5420
description: F5/8 type C domain, and Protein of unknown function (DUF1501)
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5420_F5/8_type_C_domain,_and_Protein_of_unknown_function_(DUF1501)


id: CL:5429
description: Mixed, incl. F5/8 type C domain, and NPCBM/NEW2 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5429_Mixed,_incl._F5/8_type_C_domain,_and_NPCBM/NEW2_domain


id: CL:544
description: Small ribosomal subunit, and Cytosolic large ribosomal subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:544_Small_ribosomal_subunit,_and_Cytosolic_large_ribosomal_subunit


id: CL:5440
description: Protein of unknown function (DUF1501), and Domain of unknown function DUF1553
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5440_Protein_of_unknown_function_(DUF1501),_and_Domain_of_unknown_function_DUF1553


id: CL:5450
description: Cytochrome C, Planctomycete-type, and Protein of unknown function (DUF1501)
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5450_Cytochrome_C,_Planctomycete-type,_and_Protein_of_unknown_function_(DUF1501)


id: CL:5480
description: Bacterial Ig-like domain (group 2), and Protein of unknown function (DUF1501)
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5480_Bacterial_Ig-like_domain_(group_2),_and_Protein_of_unknown_function_(DUF1501)


id: CL:5499
description: Mixed, incl. Bacterial Ig-like domain, group 2, and GDSL-like Lipase/Acylhydrolase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5499_Mixed,_incl._Bacterial_Ig-like_domain,_group_2,_and_GDSL-like_Lipase/Acylhydrolase_family


id: CL:5502
description: Mixed, incl. Bacterial Ig-like domain (group 2), and GDSL-like Lipase/Acylhydrolase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5502_Mixed,_incl._Bacterial_Ig-like_domain_(group_2),_and_GDSL-like_Lipase/Acylhydrolase_family


id: CL:5517
description: Mixed, incl. Acetyl xylan esterase, and Bacterial Ig-like domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5517_Mixed,_incl._Acetyl_xylan_esterase,_and_Bacterial_Ig-like_domain_2


id: CL:5560
description: Mixed, incl. FecR protein, and RNA polymerase sigma-70 ECF-like, Rhodopirellula baltica
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5560_Mixed,_incl._FecR_protein,_and_RNA_polymerase_sigma-70_ECF-like,_Rhodopirellula_baltica


id: CL:5577
description: Calcium ion binding, and Pilin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5577_Calcium_ion_binding,_and_Pilin-like


id: CL:5590
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5590_Mixed,_incl._Bacterial-type_flagellum_organization,_and_Helix_turn_helix,_arabinose_operon_control_protein

description:
  Mixed, incl. Bacterial-type flagellum organization, and Helix_turn_helix, arabinose operon control protein


id: CL:5604
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5604_Mostly_uncharacterized,_incl._Haem-binding_domain,_putative,_and_glucosamine-6-phosphate_deaminase_activity

description:
  Mostly uncharacterized, incl. Haem-binding domain, putative, and glucosamine-6-phosphate deaminase activity


id: CL:5605
description: Mixed, incl. Haem-binding domain, putative, and glucosamine-6-phosphate deaminase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5605_Mixed,_incl._Haem-binding_domain,_putative,_and_glucosamine-6-phosphate_deaminase_activity


id: CL:5606
description: Mixed, incl. glucosamine-6-phosphate deaminase activity, and Haem-binding domain, putative
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5606_Mixed,_incl._glucosamine-6-phosphate_deaminase_activity,_and_Haem-binding_domain,_putative


id: CL:5608
description: Mixed, incl. glucosamine-6-phosphate deaminase activity, and Haem-binding domain, putative
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5608_Mixed,_incl._glucosamine-6-phosphate_deaminase_activity,_and_Haem-binding_domain,_putative


id: CL:5610
description: Mixed, incl. glucosamine-6-phosphate deaminase activity, and Haem-binding domain, putative
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5610_Mixed,_incl._glucosamine-6-phosphate_deaminase_activity,_and_Haem-binding_domain,_putative


id: CL:5612
description: glucosamine-6-phosphate deaminase activity, and Putative membrane-bound dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5612_glucosamine-6-phosphate_deaminase_activity,_and_Putative_membrane-bound_dehydrogenase


id: CL:5614
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5614_Neutral/alkaline_non-lysosomal_ceramidase,_N-terminal,_and_WD40-repeat-containing_domain_superfamily

description:
  Neutral/alkaline non-lysosomal ceramidase, N-terminal, and WD40-repeat-containing domain superfamily


id: CL:5628
description: Mixed, incl. Acetyl xylan esterase, and Sialidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5628_Mixed,_incl._Acetyl_xylan_esterase,_and_Sialidase


id: CL:5640
description: Mixed, incl. Kelch repeat type 1, and Polymerase/histidinol phosphatase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5640_Mixed,_incl._Kelch_repeat_type_1,_and_Polymerase/histidinol_phosphatase-like


id: CL:5663
description: Mixed, incl. GlcNAc-PI de-N-acetylase, and Dienelactone hydrolase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5663_Mixed,_incl._GlcNAc-PI_de-N-acetylase,_and_Dienelactone_hydrolase_family


id: CL:5678
description: Mixed, incl. Protein of unknown function (DUF1501), and Integrin alpha, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5678_Mixed,_incl._Protein_of_unknown_function_(DUF1501),_and_Integrin_alpha,_N-terminal


id: CL:5680
description: Mixed, incl. Integrin alpha, N-terminal, and Protein of unknown function (DUF1501)
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5680_Mixed,_incl._Integrin_alpha,_N-terminal,_and_Protein_of_unknown_function_(DUF1501)


id: CL:5681
description: Mixed, incl. Phage capsid, and Putative membrane-bound dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5681_Mixed,_incl._Phage_capsid,_and_Putative_membrane-bound_dehydrogenase


id: CL:5683
description: Mixed, incl. Neutral/alkaline non-lysosomal ceramidase, N-terminal, and Cupin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5683_Mixed,_incl._Neutral/alkaline_non-lysosomal_ceramidase,_N-terminal,_and_Cupin_domain


id: CL:5693
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5693_Mixed,_incl._Glycoside_hydrolase/deacetylase,_beta/alpha-barrel,_and_Twin-arginine_translocation_pathway,_signal_sequence,_bacterial/archaeal

description:
  Mixed, incl. Glycoside hydrolase/deacetylase, beta/alpha-barrel, and Twin-arginine translocation pathway, signal sequence, bacterial/archaeal


id: CL:5703
description: Mixed, incl. Protein of unknown function DUF6807, and Nitrogen utilization
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5703_Mixed,_incl._Protein_of_unknown_function_DUF6807,_and_Nitrogen_utilization


id: CL:5726
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5726_Mixed,_incl._Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition,_and_Nucleotidyltransferase_superfamily

description:
  Mixed, incl. Transcription-coupled nucleotide-excision repair, DNA damage recognition, and Nucleotidyltransferase superfamily


id: CL:5740
description: Mixed, incl. D-serine dehydratase-like domain, and Peptidase M19
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5740_Mixed,_incl._D-serine_dehydratase-like_domain,_and_Peptidase_M19


id: CL:5742
description: Mixed, incl. Putative serine dehydratase domain, and NADP oxidoreductase coenzyme F420-dependent
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5742_Mixed,_incl._Putative_serine_dehydratase_domain,_and_NADP_oxidoreductase_coenzyme_F420-dependent


id: CL:5763
description: Mixed, incl. Pyrrolo-quinoline quinone repeat, and Von Willebrand factor (vWF) type A domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5763_Mixed,_incl._Pyrrolo-quinoline_quinone_repeat,_and_Von_Willebrand_factor_(vWF)_type_A_domain


id: CL:5764
description: Mixed, incl. Von Willebrand factor (vWF) type A domain, and Protein of unknown function DUF1552
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5764_Mixed,_incl._Von_Willebrand_factor_(vWF)_type_A_domain,_and_Protein_of_unknown_function_DUF1552


id: CL:5765
description: Mixed, incl. Protein of unknown function DUF1552, and Domain of unknown function DUF1595
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5765_Mixed,_incl._Protein_of_unknown_function_DUF1552,_and_Domain_of_unknown_function_DUF1595


id: CL:5767
description: Mixed, incl. Protein of unknown function DUF1552, and Domain of unknown function DUF1595
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5767_Mixed,_incl._Protein_of_unknown_function_DUF1552,_and_Domain_of_unknown_function_DUF1595


id: CL:5769
description: Protein of unknown function DUF1552, and Domain of unknown function DUF1585
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5769_Protein_of_unknown_function_DUF1552,_and_Domain_of_unknown_function_DUF1585


id: CL:5771
description: Protein of unknown function DUF1552, and Domain of unknown function DUF1585
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5771_Protein_of_unknown_function_DUF1552,_and_Domain_of_unknown_function_DUF1585


id: CL:5773
description: Protein of unknown function DUF1552, and Domain of unknown function DUF1585
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5773_Protein_of_unknown_function_DUF1552,_and_Domain_of_unknown_function_DUF1585


id: CL:5809
description: Mixed, incl. Domain of unknown function DUF1595, and Protein of unknown function DUF1552
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5809_Mixed,_incl._Domain_of_unknown_function_DUF1595,_and_Protein_of_unknown_function_DUF1552


id: CL:5812
description: Mixed, incl. PA14 domain, and Bacterial pre-peptidase C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5812_Mixed,_incl._PA14_domain,_and_Bacterial_pre-peptidase_C-terminal_domain


id: CL:5829
description: Mixed, incl. Antibiotic catabolic process, and Metallopeptidase, catalytic domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5829_Mixed,_incl._Antibiotic_catabolic_process,_and_Metallopeptidase,_catalytic_domain_superfamily


id: CL:5841
description: Mixed, incl. Response to oxidative stress, and Transcription regulator HTH, AraC- type
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5841_Mixed,_incl._Response_to_oxidative_stress,_and_Transcription_regulator_HTH,_AraC-_type


id: CL:5842
description: Mixed, incl. PHM/PNGase F domain superfamily, and Inner membrane protein RclC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5842_Mixed,_incl._PHM/PNGase_F_domain_superfamily,_and_Inner_membrane_protein_RclC-like


id: CL:5843
description: Mixed, incl. Inner membrane protein RclC-like, and Transcription regulator HTH, AraC- type
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5843_Mixed,_incl._Inner_membrane_protein_RclC-like,_and_Transcription_regulator_HTH,_AraC-_type


id: CL:5852
description: Mixed, incl. PHM/PNGase F domain superfamily, and Bacterial Ig-like domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5852_Mixed,_incl._PHM/PNGase_F_domain_superfamily,_and_Bacterial_Ig-like_domain_2


id: CL:5861
description: Mixed, incl. FecR protein, and RNA polymerase sigma-70 ECF-like, Rhodopirellula baltica
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5861_Mixed,_incl._FecR_protein,_and_RNA_polymerase_sigma-70_ECF-like,_Rhodopirellula_baltica


id: CL:5870
description: Von Willebrand factor (vWF) type A domain, and Domain of unknown function DUF4159
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5870_Von_Willebrand_factor_(vWF)_type_A_domain,_and_Domain_of_unknown_function_DUF4159


id: CL:5872
description: Von Willebrand factor (vWF) type A domain, and Domain of unknown function DUF4159
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5872_Von_Willebrand_factor_(vWF)_type_A_domain,_and_Domain_of_unknown_function_DUF4159


id: CL:5873
description: Double transmembrane domain, and Glutamine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5873_Double_transmembrane_domain,_and_Glutamine_metabolic_process


id: CL:5875
description: Mixed, incl. Double transmembrane domain, and Domain of unknown function DUF4159
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5875_Mixed,_incl._Double_transmembrane_domain,_and_Domain_of_unknown_function_DUF4159


id: CL:5900
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5900_Mixed,_incl._Domain_of_unknown_function_DUF4159,_and_Conserved_hypothetical_protein_CHP02302,_transmembrane

description:
  Mixed, incl. Domain of unknown function DUF4159, and Conserved hypothetical protein CHP02302, transmembrane


id: CL:5918
description: Mixed, incl. Filamin/ABP280 repeat-like, and Domain of unknown function DUF4159
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5918_Mixed,_incl._Filamin/ABP280_repeat-like,_and_Domain_of_unknown_function_DUF4159


id: CL:5931
description: Pyrrolo-quinoline quinone repeat, and Flavin-dependent halogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5931_Pyrrolo-quinoline_quinone_repeat,_and_Flavin-dependent_halogenase


id: CL:5933
description: Pyrrolo-quinoline quinone repeat, and Flavin-dependent halogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5933_Pyrrolo-quinoline_quinone_repeat,_and_Flavin-dependent_halogenase


id: CL:5934
description: Pyrrolo-quinoline quinone repeat, and Flavin-dependent halogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5934_Pyrrolo-quinoline_quinone_repeat,_and_Flavin-dependent_halogenase


id: CL:5937
description: Pyrrolo-quinoline quinone repeat, and Flavin-dependent halogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5937_Pyrrolo-quinoline_quinone_repeat,_and_Flavin-dependent_halogenase


id: CL:5940
description: Pyrrolo-quinoline quinone repeat, and Tricarboxylic acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5940_Pyrrolo-quinoline_quinone_repeat,_and_Tricarboxylic_acid_biosynthetic_process


id: CL:5942
description: Pyrrolo-quinoline quinone repeat, and Tricarboxylic acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5942_Pyrrolo-quinoline_quinone_repeat,_and_Tricarboxylic_acid_biosynthetic_process


id: CL:5944
description: PQQ-like domain, and Pyrrolo-quinoline quinone beta-propeller repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5944_PQQ-like_domain,_and_Pyrrolo-quinoline_quinone_beta-propeller_repeat


id: CL:5946
description: Mixed, incl. PQQ-like domain, and Tricarboxylic acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5946_Mixed,_incl._PQQ-like_domain,_and_Tricarboxylic_acid_biosynthetic_process


id: CL:5962
description: PQQ-like domain, and Pyrrolo-quinoline quinone beta-propeller repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:5962_PQQ-like_domain,_and_Pyrrolo-quinoline_quinone_beta-propeller_repeat


id: CL:6008
description: Mixed, incl. Cell-cell adhesion, and F5/8 type C domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6008_Mixed,_incl._Cell-cell_adhesion,_and_F5/8_type_C_domain


id: CL:602
description: RNA polymerase, and Transcription antitermination
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:602_RNA_polymerase,_and_Transcription_antitermination


id: CL:6033
description: Mixed, incl. Gfo/Idh/MocA-like oxidoreductase, N-terminal, and 3-keto-disaccharide hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6033_Mixed,_incl._Gfo/Idh/MocA-like_oxidoreductase,_N-terminal,_and_3-keto-disaccharide_hydrolase


id: CL:6034
description: Mixed, incl. Gfo/Idh/MocA-like oxidoreductase, N-terminal, and 3-keto-disaccharide hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6034_Mixed,_incl._Gfo/Idh/MocA-like_oxidoreductase,_N-terminal,_and_3-keto-disaccharide_hydrolase


id: CL:6036
description: Mixed, incl. Gfo/Idh/MocA-like oxidoreductase, N-terminal, and 3-keto-disaccharide hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6036_Mixed,_incl._Gfo/Idh/MocA-like_oxidoreductase,_N-terminal,_and_3-keto-disaccharide_hydrolase


id: CL:6037
description: Mixed, incl. 3-keto-disaccharide hydrolase, and Oxidoreductase family, NAD-binding Rossmann fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6037_Mixed,_incl._3-keto-disaccharide_hydrolase,_and_Oxidoreductase_family,_NAD-binding_Rossmann_fold


id: CL:6038
description: Mixed, incl. 3-keto-disaccharide hydrolase, and Oxidoreductase family, NAD-binding Rossmann fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6038_Mixed,_incl._3-keto-disaccharide_hydrolase,_and_Oxidoreductase_family,_NAD-binding_Rossmann_fold


id: CL:6040
description: 3-keto-disaccharide hydrolase, and Gfo/Idh/MocA-like oxidoreductase, bacterial type, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6040_3-keto-disaccharide_hydrolase,_and_Gfo/Idh/MocA-like_oxidoreductase,_bacterial_type,_C-terminal


id: CL:6042
description: 3-keto-disaccharide hydrolase, and Gfo/Idh/MocA-like oxidoreductase, bacterial type, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6042_3-keto-disaccharide_hydrolase,_and_Gfo/Idh/MocA-like_oxidoreductase,_bacterial_type,_C-terminal


id: CL:6043
description: 3-keto-disaccharide hydrolase, and Gfo/Idh/MocA-like oxidoreductase, bacterial type, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6043_3-keto-disaccharide_hydrolase,_and_Gfo/Idh/MocA-like_oxidoreductase,_bacterial_type,_C-terminal


id: CL:6045
description: Oxidoreductase family, C-terminal alpha/beta domain, and 3-keto-disaccharide hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6045_Oxidoreductase_family,_C-terminal_alpha/beta_domain,_and_3-keto-disaccharide_hydrolase


id: CL:6059
description: Gfo/Idh/MocA-like oxidoreductase, bacterial type, C-terminal, and 3-keto-disaccharide hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6059_Gfo/Idh/MocA-like_oxidoreductase,_bacterial_type,_C-terminal,_and_3-keto-disaccharide_hydrolase


id: CL:6072
description: Thylakoid, and Gfo/Idh/MocA-like oxidoreductase, bacterial type, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6072_Thylakoid,_and_Gfo/Idh/MocA-like_oxidoreductase,_bacterial_type,_C-terminal


id: CL:6075
description: Thylakoid, and Gfo/Idh/MocA-like oxidoreductase, bacterial type, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6075_Thylakoid,_and_Gfo/Idh/MocA-like_oxidoreductase,_bacterial_type,_C-terminal


id: CL:6100
description: Protein of unknown function DUF6807, and Xylose isomerase-like TIM barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6100_Protein_of_unknown_function_DUF6807,_and_Xylose_isomerase-like_TIM_barrel


id: CL:6114
description: Mixed, incl. Soluble quinoprotein glucose/sorbosone dehydrogenase, and Cell killing
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6114_Mixed,_incl._Soluble_quinoprotein_glucose/sorbosone_dehydrogenase,_and_Cell_killing


id: CL:6115
description: Mixed, incl. Haem-binding domain, putative, and Cell killing
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6115_Mixed,_incl._Haem-binding_domain,_putative,_and_Cell_killing


id: CL:6117
description: Mixed, incl. Haem-binding domain, putative, and Cell killing
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6117_Mixed,_incl._Haem-binding_domain,_putative,_and_Cell_killing


id: CL:6119
description: Haem-binding domain, putative, and GDSL-like Lipase/Acylhydrolase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6119_Haem-binding_domain,_putative,_and_GDSL-like_Lipase/Acylhydrolase_family


id: CL:6132
description: Cell killing, and Glucose/Sorbosone dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6132_Cell_killing,_and_Glucose/Sorbosone_dehydrogenase


id: CL:6154
description: Mixed, incl. Glucose / Sorbosone dehydrogenase, and TatD related DNase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6154_Mixed,_incl._Glucose_/_Sorbosone_dehydrogenase,_and_TatD_related_DNase


id: CL:6155
description: Mixed, incl. TatD related DNase, and Glucose/Sorbosone dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6155_Mixed,_incl._TatD_related_DNase,_and_Glucose/Sorbosone_dehydrogenase


id: CL:6164
description: Glucose / Sorbosone dehydrogenase, and TAT (twin-arginine translocation) pathway signal sequence
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6164_Glucose_/_Sorbosone_dehydrogenase,_and_TAT_(twin-arginine_translocation)_pathway_signal_sequence


id: CL:6174
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6174_Mixed,_incl._H(2):CoB-CoM_heterodisulfide,ferredoxin_reductase_subunit_A-like,_and_SGNH_hydrolase-type_esterase_domain

description:
  Mixed, incl. H(2):CoB-CoM heterodisulfide,ferredoxin reductase subunit A-like, and SGNH hydrolase-type esterase domain


id: CL:6176
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6176_H(2):CoB-CoM_heterodisulfide,ferredoxin_reductase_subunit_A-like,_and_SGNH_hydrolase-type_esterase_domain

description:
  H(2):CoB-CoM heterodisulfide,ferredoxin reductase subunit A-like, and SGNH hydrolase-type esterase domain


id: CL:6205
description: Gfo/Idh/MocA-like oxidoreductase, N-terminal, and Xylose isomerase-like TIM barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6205_Gfo/Idh/MocA-like_oxidoreductase,_N-terminal,_and_Xylose_isomerase-like_TIM_barrel


id: CL:6207
description: Gfo/Idh/MocA-like oxidoreductase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6207_Gfo/Idh/MocA-like_oxidoreductase,_N-terminal


id: CL:6209
description: Gfo/Idh/MocA-like oxidoreductase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6209_Gfo/Idh/MocA-like_oxidoreductase,_N-terminal


id: CL:6211
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6211_Mixed,_incl._Gfo/Idh/MocA-like_oxidoreductase,_C-terminal,_and_TAT_(twin-arginine_translocation)_pathway_signal_sequence

description:
  Mixed, incl. Gfo/Idh/MocA-like oxidoreductase, C-terminal, and TAT (twin-arginine translocation) pathway signal sequence


id: CL:6228
description: Gfo/Idh/MocA-like oxidoreductase, C-terminal, and Homoserine dehydrogenase, NAD binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6228_Gfo/Idh/MocA-like_oxidoreductase,_C-terminal,_and_Homoserine_dehydrogenase,_NAD_binding_domain


id: CL:626
description: Proton-transporting ATP synthase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:626_Proton-transporting_ATP_synthase_complex


id: CL:6272
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6272_Mixed,_incl._mannose-6-phosphate_isomerase_activity,_and_Glycoside_hydrolase-type_carbohydrate-binding

description:
  Mixed, incl. mannose-6-phosphate isomerase activity, and Glycoside hydrolase-type carbohydrate-binding


id: CL:6291
description: Mixed, incl. Integral component of membrane, and Cellular component biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6291_Mixed,_incl._Integral_component_of_membrane,_and_Cellular_component_biogenesis


id: CL:6292
description: Mixed, incl. Membrane, and Metalloexopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6292_Mixed,_incl._Membrane,_and_Metalloexopeptidase_activity


id: CL:6294
description: Mixed, incl. Integral component of membrane, and Ribosome biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6294_Mixed,_incl._Integral_component_of_membrane,_and_Ribosome_biogenesis


id: CL:6295
description: Mixed, incl. Membrane, and Cytochrome c
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6295_Mixed,_incl._Membrane,_and_Cytochrome_c


id: CL:6296
description: Mixed, incl. Membrane, and Methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6296_Mixed,_incl._Membrane,_and_Methylation


id: CL:6298
description: Mixed, incl. Localization, and Von Willebrand factor (vWF) type A domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6298_Mixed,_incl._Localization,_and_Von_Willebrand_factor_(vWF)_type_A_domain


id: CL:6299
description: Mixed, incl. Transmembrane transporter activity, and Cellular component biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6299_Mixed,_incl._Transmembrane_transporter_activity,_and_Cellular_component_biogenesis


id: CL:6300
description: Mostly uncharacterized, incl. Cellular component biogenesis, and Mannosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6300_Mostly_uncharacterized,_incl._Cellular_component_biogenesis,_and_Mannosylation


id: CL:6302
description: Mostly uncharacterized, incl. Cellular component biogenesis, and Mannosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6302_Mostly_uncharacterized,_incl._Cellular_component_biogenesis,_and_Mannosylation


id: CL:6304
description: Mixed, incl. Cell envelope, and Cytochrome complex assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6304_Mixed,_incl._Cell_envelope,_and_Cytochrome_complex_assembly


id: CL:6306
description: Mostly uncharacterized, incl. Cytochrome complex assembly, and Mannosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6306_Mostly_uncharacterized,_incl._Cytochrome_complex_assembly,_and_Mannosylation


id: CL:6308
description: Mostly uncharacterized, incl. Cytochrome complex assembly, and Mannosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6308_Mostly_uncharacterized,_incl._Cytochrome_complex_assembly,_and_Mannosylation


id: CL:6309
description: Mixed, incl. Mannosylation, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6309_Mixed,_incl._Mannosylation,_and_Tetratricopeptide_repeat


id: CL:6310
description: Mixed, incl. Tetratricopeptide repeat, and DnaJ domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6310_Mixed,_incl._Tetratricopeptide_repeat,_and_DnaJ_domain


id: CL:6314
description: Mixed, incl. rRNA pseudouridine synthase activity, and Spermidine synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6314_Mixed,_incl._rRNA_pseudouridine_synthase_activity,_and_Spermidine_synthase_activity


id: CL:6335
description: Mixed, incl. Glycosyl transferase family 39/83, and Uncharacterised protein family YfhO
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6335_Mixed,_incl._Glycosyl_transferase_family_39/83,_and_Uncharacterised_protein_family_YfhO


id: CL:6344
description: Mostly uncharacterized, incl. Cytochrome complex assembly, and NolW-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6344_Mostly_uncharacterized,_incl._Cytochrome_complex_assembly,_and_NolW-like


id: CL:6346
description: Mostly uncharacterized, incl. Cytochrome C assembly protein, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6346_Mostly_uncharacterized,_incl._Cytochrome_C_assembly_protein,_and_ABC-2_family_transporter_protein


id: CL:6349
description: Mixed, incl. ABC-2 family transporter protein, and rRNA pseudouridine synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6349_Mixed,_incl._ABC-2_family_transporter_protein,_and_rRNA_pseudouridine_synthase_activity


id: CL:6382
description: Mixed, incl. Peptidase S26, and FHA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6382_Mixed,_incl._Peptidase_S26,_and_FHA_domain


id: CL:6408
description: Mixed, incl. Outer membrane efflux protein, and Putative Tad-like Flp pilus-assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6408_Mixed,_incl._Outer_membrane_efflux_protein,_and_Putative_Tad-like_Flp_pilus-assembly


id: CL:6410
description: Mixed, incl. Putative Tad-like Flp pilus-assembly, and Outer membrane efflux protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6410_Mixed,_incl._Putative_Tad-like_Flp_pilus-assembly,_and_Outer_membrane_efflux_protein


id: CL:6413
description: Mixed, incl. Bacteriocin metabolic process, and Putative Tad-like Flp pilus-assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6413_Mixed,_incl._Bacteriocin_metabolic_process,_and_Putative_Tad-like_Flp_pilus-assembly


id: CL:6437
description: Mixed, incl. Ketone catabolic process, and Glucuronate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6437_Mixed,_incl._Ketone_catabolic_process,_and_Glucuronate_metabolic_process


id: CL:6454
description: Mixed, incl. Protein of unknown function DUF1207, and Zinc carboxypeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6454_Mixed,_incl._Protein_of_unknown_function_DUF1207,_and_Zinc_carboxypeptidase


id: CL:6456
description: Mixed, incl. Pectate lyase activity, and Fibronectin type 3 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6456_Mixed,_incl._Pectate_lyase_activity,_and_Fibronectin_type_3_domain


id: CL:6480
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6480_Mostly_uncharacterized,_incl._Membrane-bound_transcription_factor_site-2_protease,_and_Large_cysteine-rich_periplasmic_protein_OmcB-like,_DUF11_domain

description:
  Mostly uncharacterized, incl. Membrane-bound transcription factor site-2 protease, and Large cysteine-rich periplasmic protein OmcB-like, DUF11 domain


id: CL:6483
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6483_Mixed,_incl._Membrane-bound_transcription_factor_site-2_protease,_and_Domain_present_in_phytochromes_and_cGMP-specific_phosphodiesterases.

description:
  Mixed, incl. Membrane-bound transcription factor site-2 protease, and Domain present in phytochromes and cGMP-specific phosphodiesterases.


id: CL:6485
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6485_Mixed,_incl._Membrane-bound_transcription_factor_site-2_protease,_and_Barrel-sandwich_domain_of_CusB_or_HlyD_membrane-fusion

description:
  Mixed, incl. Membrane-bound transcription factor site-2 protease, and Barrel-sandwich domain of CusB or HlyD membrane-fusion


id: CL:6513
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6513_Mixed,_incl._Large_cysteine-rich_periplasmic_protein_OmcB-like,_DUF11_domain,_and_Glycoside_hydrolase_family_10_domain

description:
  Mixed, incl. Large cysteine-rich periplasmic protein OmcB-like, DUF11 domain, and Glycoside hydrolase family 10 domain


id: CL:6516
description: Mixed, incl. Domain of unknown function DUF11, and Glycoside hydrolase family 10 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6516_Mixed,_incl._Domain_of_unknown_function_DUF11,_and_Glycoside_hydrolase_family_10_domain


id: CL:6536
description: Mixed, incl. ABC-2 transporter-like, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6536_Mixed,_incl._ABC-2_transporter-like,_and_ABC-2_family_transporter_protein


id: CL:6554
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6554_Mixed,_incl._Putative_regulatory_protein,_and_Terpenoid_cyclases/protein_prenyltransferase_alpha-alpha_toroid

description:
  Mixed, incl. Putative regulatory protein, and Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid


id: CL:6563
description: Mixed, incl. Stress responsive alpha-beta barrel, and Acyltransferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6563_Mixed,_incl._Stress_responsive_alpha-beta_barrel,_and_Acyltransferase_family


id: CL:6575
description: Mostly uncharacterized, incl. Caspase domain, and GH3 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6575_Mostly_uncharacterized,_incl._Caspase_domain,_and_GH3_family


id: CL:6577
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6577_Mostly_uncharacterized,_incl._Domain_of_unknown_function_DUF4132,_and_Inverse_autotransporter,_beta-domain

description:
  Mostly uncharacterized, incl. Domain of unknown function DUF4132, and Inverse autotransporter, beta-domain


id: CL:6581
description: Mixed, incl. Inverse autotransporter, beta-domain, and Recombinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6581_Mixed,_incl._Inverse_autotransporter,_beta-domain,_and_Recombinase


id: CL:6629
description: Mostly uncharacterized, incl. Vancomycin resistance, and ABC transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6629_Mostly_uncharacterized,_incl._Vancomycin_resistance,_and_ABC_transporter


id: CL:6630
description: Mixed, incl. Vancomycin resistance, and Peptidase family M50
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6630_Mixed,_incl._Vancomycin_resistance,_and_Peptidase_family_M50


id: CL:6632
description: Vancomycin resistance, and Peptidase family M50
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6632_Vancomycin_resistance,_and_Peptidase_family_M50


id: CL:6653
description: Mixed, incl. Fibronectin type 3 domain, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6653_Mixed,_incl._Fibronectin_type_3_domain,_and_Sigma-70,_region_4


id: CL:666
description: Mixed, incl. RF-1 domain, and TGS-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:666_Mixed,_incl._RF-1_domain,_and_TGS-like


id: CL:6668
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6668_Mostly_uncharacterized,_incl._Terminase_large_subunit_GpA,_endonuclease_domain,_and_Cell_wall_macromolecule_metabolic_process

description:
  Mostly uncharacterized, incl. Terminase large subunit GpA, endonuclease domain, and Cell wall macromolecule metabolic process


id: CL:6670
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6670_Mostly_uncharacterized,_incl._Terminase_large_subunit_GpA,_endonuclease_domain,_and_Formate_metabolic_process

description:
  Mostly uncharacterized, incl. Terminase large subunit GpA, endonuclease domain, and Formate metabolic process


id: CL:6671
description: Mostly uncharacterized, incl. Formate metabolic process, and Xylanase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6671_Mostly_uncharacterized,_incl._Formate_metabolic_process,_and_Xylanase_activity


id: CL:6673
description: Mixed, incl. MotA/TolQ/ExbB proton channel, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6673_Mixed,_incl._MotA/TolQ/ExbB_proton_channel,_and_Tetratricopeptide_repeat


id: CL:6694
description: Terminase large subunit GpA, endonuclease domain, and RNA ligase domain, REL/Rln2
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6694_Terminase_large_subunit_GpA,_endonuclease_domain,_and_RNA_ligase_domain,_REL/Rln2


id: CL:6712
description: Mixed, incl. Cysteine-rich CPXCG, and Oxidoreductase molybdopterin binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6712_Mixed,_incl._Cysteine-rich_CPXCG,_and_Oxidoreductase_molybdopterin_binding_domain


id: CL:6721
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6721_Mostly_uncharacterized,_incl._Hint_domain_N-terminal,_and_Ligase_activity,_forming_phosphoric_ester_bonds

description:
  Mostly uncharacterized, incl. Hint domain N-terminal, and Ligase activity, forming phosphoric ester bonds


id: CL:6722
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6722_Mostly_uncharacterized,_incl._Hint_domain_N-terminal,_and_Ligase_activity,_forming_phosphoric_ester_bonds

description:
  Mostly uncharacterized, incl. Hint domain N-terminal, and Ligase activity, forming phosphoric ester bonds


id: CL:6723
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6723_Mostly_uncharacterized,_incl._Hint_domain_N-terminal,_and_Hydrolase_activity,_acting_on_glycosyl_bonds

description:
  Mostly uncharacterized, incl. Hint domain N-terminal, and Hydrolase activity, acting on glycosyl bonds


id: CL:6724
description: Mostly uncharacterized, incl. Hint domain N-terminal, and Lipid degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6724_Mostly_uncharacterized,_incl._Hint_domain_N-terminal,_and_Lipid_degradation


id: CL:6725
description: Mostly uncharacterized, incl. Hint domain N-terminal, and Lipid degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6725_Mostly_uncharacterized,_incl._Hint_domain_N-terminal,_and_Lipid_degradation


id: CL:6727
description: Mostly uncharacterized, incl. Hint domain N-terminal, and PD-(D/E)XK nuclease superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6727_Mostly_uncharacterized,_incl._Hint_domain_N-terminal,_and_PD-(D/E)XK_nuclease_superfamily


id: CL:6729
description: Mixed, incl. Hint domain N-terminal, and FtsK domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6729_Mixed,_incl._Hint_domain_N-terminal,_and_FtsK_domain


id: CL:6730
description: Mixed, incl. FtsK domain, and Lipid degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6730_Mixed,_incl._FtsK_domain,_and_Lipid_degradation


id: CL:6741
description: Mixed, incl. Hint domain N-terminal, and YTV
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6741_Mixed,_incl._Hint_domain_N-terminal,_and_YTV


id: CL:6759
description: Mixed, incl. WD40-like Beta Propeller Repeat, and Filamin/ABP280 repeat-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6759_Mixed,_incl._WD40-like_Beta_Propeller_Repeat,_and_Filamin/ABP280_repeat-like


id: CL:6762
description: Mixed, incl. Filamin/ABP280 repeat-like, and Thioredoxin, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6762_Mixed,_incl._Filamin/ABP280_repeat-like,_and_Thioredoxin,_conserved_site


id: CL:6790
description: Mostly uncharacterized, incl. Cyclo-ligase activity, and Antibiotic catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6790_Mostly_uncharacterized,_incl._Cyclo-ligase_activity,_and_Antibiotic_catabolic_process


id: CL:6792
description: Mixed, incl. Establishment of competence for transformation, and MotA/TolQ/ExbB proton channel
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6792_Mixed,_incl._Establishment_of_competence_for_transformation,_and_MotA/TolQ/ExbB_proton_channel


id: CL:6811
description: Mixed, incl. Alpha-sialidase activity, and Galactose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6811_Mixed,_incl._Alpha-sialidase_activity,_and_Galactose_metabolic_process


id: CL:6824
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6824_Mixed,_incl._Ligase_activity,_forming_phosphoric_ester_bonds,_and_RNA_repair_pathway_DNA_polymerase_beta

description:
  Mixed, incl. Ligase activity, forming phosphoric ester bonds, and RNA repair pathway DNA polymerase beta


id: CL:6826
description: RNA ligase activity, and Positive regulation of molecular function
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6826_RNA_ligase_activity,_and_Positive_regulation_of_molecular_function


id: CL:684
description: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:684_Aminoacyl-tRNA_synthetase,_class_Ia,_anticodon-binding


id: CL:6846
description: Mixed, incl. Protein of unknown function DUF1579, and Sodium ion transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6846_Mixed,_incl._Protein_of_unknown_function_DUF1579,_and_Sodium_ion_transmembrane_transporter_activity


id: CL:6860
description: Mostly uncharacterized, incl. Transposase activity, and DNA strand exchange activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6860_Mostly_uncharacterized,_incl._Transposase_activity,_and_DNA_strand_exchange_activity


id: CL:6862
description: Mostly uncharacterized, incl. Transposase activity, and NUDIX hydrolase-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6862_Mostly_uncharacterized,_incl._Transposase_activity,_and_NUDIX_hydrolase-like_domain_superfamily


id: CL:6864
description: Mostly uncharacterized, incl. Transposase activity, and DNA strand exchange activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6864_Mostly_uncharacterized,_incl._Transposase_activity,_and_DNA_strand_exchange_activity


id: CL:6866
description: Mixed, incl. Transposase activity, and DNA strand exchange activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6866_Mixed,_incl._Transposase_activity,_and_DNA_strand_exchange_activity


id: CL:6867
description: Mixed, incl. Transposase activity, and DNA strand exchange activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6867_Mixed,_incl._Transposase_activity,_and_DNA_strand_exchange_activity


id: CL:6871
description: Mixed, incl. AAA domain, and Transposase, IS4-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6871_Mixed,_incl._AAA_domain,_and_Transposase,_IS4-like


id: CL:6885
description: Mixed, incl. Putative MetA-pathway of phenol degradation, and PA14/GLEYA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6885_Mixed,_incl._Putative_MetA-pathway_of_phenol_degradation,_and_PA14/GLEYA_domain


id: CL:6896
description: Mixed, incl. DDE transposase sub-family, and Thioredoxin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6896_Mixed,_incl._DDE_transposase_sub-family,_and_Thioredoxin-like


id: CL:6900
description: Mixed, incl. Thioredoxin-like, and LysR, substrate-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6900_Mixed,_incl._Thioredoxin-like,_and_LysR,_substrate-binding


id: CL:6926
description: Mixed, incl. MotA/TolQ/ExbB proton channel, and Ligase activity, forming nitrogen-metal bonds
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6926_Mixed,_incl._MotA/TolQ/ExbB_proton_channel,_and_Ligase_activity,_forming_nitrogen-metal_bonds


id: CL:6942
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6942_Mixed,_incl._ATP-grasp_fold,_PylC-type,_and_Electron_transporter,_transferring_electrons_within_the_cyclic_electron_transport_pathway_of_photosynthesis_activity

description:
  Mixed, incl. ATP-grasp fold, PylC-type, and Electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity


id: CL:6959
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6959_Mixed,_incl._Glyoxalase/fosfomycin_resistance/dioxygenase_domain,_and_Phosphonate_and_phosphinate_metabolism

description:
  Mixed, incl. Glyoxalase/fosfomycin resistance/dioxygenase domain, and Phosphonate and phosphinate metabolism


id: CL:6961
description: Mixed, incl. Exonuclease, and Magnesium chelatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6961_Mixed,_incl._Exonuclease,_and_Magnesium_chelatase_activity


id: CL:6971
description: Glyoxalase/fosfomycin resistance/dioxygenase domain, and Phosphonate and phosphinate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6971_Glyoxalase/fosfomycin_resistance/dioxygenase_domain,_and_Phosphonate_and_phosphinate_metabolism


id: CL:6987
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6987_Mostly_uncharacterized,_incl._Heparan-alpha-glucosaminide_N-acetyltransferase,_catalytic_domain,_and_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives

description:
  Mostly uncharacterized, incl. Heparan-alpha-glucosaminide N-acetyltransferase, catalytic domain, and Racemase and epimerase activity, acting on carbohydrates and derivatives


id: CL:6988
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6988_Mostly_uncharacterized,_incl._Heparan-alpha-glucosaminide_N-acetyltransferase,_catalytic_domain,_and_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives

description:
  Mostly uncharacterized, incl. Heparan-alpha-glucosaminide N-acetyltransferase, catalytic domain, and Racemase and epimerase activity, acting on carbohydrates and derivatives


id: CL:6989
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6989_Mostly_uncharacterized,_incl._Heparan-alpha-glucosaminide_N-acetyltransferase,_catalytic_domain,_and_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives

description:
  Mostly uncharacterized, incl. Heparan-alpha-glucosaminide N-acetyltransferase, catalytic domain, and Racemase and epimerase activity, acting on carbohydrates and derivatives


id: CL:6990
description: Mostly uncharacterized, incl. Galactose-binding-like domain superfamily, and Host cell
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6990_Mostly_uncharacterized,_incl._Galactose-binding-like_domain_superfamily,_and_Host_cell


id: CL:6991
description: Mostly uncharacterized, incl. Host cell, and VIT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6991_Mostly_uncharacterized,_incl._Host_cell,_and_VIT_domain


id: CL:6993
description: Mixed, incl. Protoglobin, and NPCBM/NEW2 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:6993_Mixed,_incl._Protoglobin,_and_NPCBM/NEW2_domain


id: CL:7009
description: Mixed, incl. VIT domain, and DNA transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7009_Mixed,_incl._VIT_domain,_and_DNA_transport


id: CL:7022
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7022_Mixed,_incl._DCC1-like_thiol-disulfide_oxidoreductase_family,_and_Helix_turn_helix_multiple_antibiotic_resistance_protein

description:
  Mixed, incl. DCC1-like thiol-disulfide oxidoreductase family, and Helix_turn_helix multiple antibiotic resistance protein


id: CL:7032
description: Mixed, incl. Kelch, and Heparan-alpha-glucosaminide N-acetyltransferase, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7032_Mixed,_incl._Kelch,_and_Heparan-alpha-glucosaminide_N-acetyltransferase,_catalytic_domain


id: CL:7046
description: Mixed, incl. Recombinase zinc beta ribbon domain, and Initiation factor
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7046_Mixed,_incl._Recombinase_zinc_beta_ribbon_domain,_and_Initiation_factor


id: CL:7061
description: Mixed, incl. PepSY-associated TM region, and Peroxiredoxin, AhpC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7061_Mixed,_incl._PepSY-associated_TM_region,_and_Peroxiredoxin,_AhpC-type


id: CL:707
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:707_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity,_and_Aspartyl/Asparaginyl-tRNA_synthetase,_class_IIb

description:
  glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, and Aspartyl/Asparaginyl-tRNA synthetase, class IIb


id: CL:7074
description: Mixed, incl. FG-GAP repeat, and Tetratricopeptide-like helical domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7074_Mixed,_incl._FG-GAP_repeat,_and_Tetratricopeptide-like_helical_domain_superfamily


id: CL:7075
description: Mixed, incl. FG-GAP repeat, and RNA polymerase sigma-70 ECF-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7075_Mixed,_incl._FG-GAP_repeat,_and_RNA_polymerase_sigma-70_ECF-like


id: CL:7076
description: Mixed, incl. FG-GAP repeat, and RNA polymerase sigma-70 ECF-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7076_Mixed,_incl._FG-GAP_repeat,_and_RNA_polymerase_sigma-70_ECF-like


id: CL:7077
description: Mixed, incl. FG-GAP repeat, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7077_Mixed,_incl._FG-GAP_repeat,_and_Tetratricopeptide_repeat


id: CL:7079
description: Mixed, incl. Cartilage acidic protein 1, and Flavin-dependent halogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7079_Mixed,_incl._Cartilage_acidic_protein_1,_and_Flavin-dependent_halogenase


id: CL:7082
description: FG-GAP repeat, and Flavin-dependent halogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7082_FG-GAP_repeat,_and_Flavin-dependent_halogenase


id: CL:7086
description: Biosynthesis of enediyne antibiotics, and Flavin-dependent halogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7086_Biosynthesis_of_enediyne_antibiotics,_and_Flavin-dependent_halogenase


id: CL:7118
description: Mixed, incl. Biosynthesis of enediyne antibiotics, and Cytochrome c-552/4
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7118_Mixed,_incl._Biosynthesis_of_enediyne_antibiotics,_and_Cytochrome_c-552/4


id: CL:7128
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7128_Mixed,_incl._ECF_sigma_factor,_and_Nucleobase-containing_compound_transmembrane_transporter_activity

description:
  Mixed, incl. ECF sigma factor, and Nucleobase-containing compound transmembrane transporter activity


id: CL:7130
description: ECF sigma factor, and RNA polymerase sigma-70 ECF-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7130_ECF_sigma_factor,_and_RNA_polymerase_sigma-70_ECF-like


id: CL:7147
description: Mixed, incl. Carbamoyltransferase, and Cytochrome c-552/4
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7147_Mixed,_incl._Carbamoyltransferase,_and_Cytochrome_c-552/4


id: CL:7149
description: Carbamoyltransferase, and SGNH hydrolase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7149_Carbamoyltransferase,_and_SGNH_hydrolase_superfamily


id: CL:7167
description: Mostly uncharacterized, incl. Von Willebrand factor, type A, and DNA modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7167_Mostly_uncharacterized,_incl._Von_Willebrand_factor,_type_A,_and_DNA_modification


id: CL:7168
description: Mostly uncharacterized, incl. DNA modification, and Von Willebrand factor, type A
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7168_Mostly_uncharacterized,_incl._DNA_modification,_and_Von_Willebrand_factor,_type_A


id: CL:7169
description: Mixed, incl. Von Willebrand factor, type A, and Endonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7169_Mixed,_incl._Von_Willebrand_factor,_type_A,_and_Endonuclease_activity


id: CL:7170
description: Mixed, incl. Von Willebrand factor, type A, and Inverse autotransporter, beta-domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7170_Mixed,_incl._Von_Willebrand_factor,_type_A,_and_Inverse_autotransporter,_beta-domain


id: CL:7171
description: Mixed, incl. Von Willebrand factor, type A, and Endonuclease/exonuclease/phosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7171_Mixed,_incl._Von_Willebrand_factor,_type_A,_and_Endonuclease/exonuclease/phosphatase


id: CL:7175
description: Mixed, incl. Putative glutamine amidotransferase, and Double transmembrane domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7175_Mixed,_incl._Putative_glutamine_amidotransferase,_and_Double_transmembrane_domain


id: CL:7191
description: Mixed, incl. Inverse autotransporter, beta-domain, and Polyketide cyclase/dehydrase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7191_Mixed,_incl._Inverse_autotransporter,_beta-domain,_and_Polyketide_cyclase/dehydrase


id: CL:7203
description: Mixed, incl. ATPase, dynein-related, AAA domain, and DNA restriction-modification system
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7203_Mixed,_incl._ATPase,_dynein-related,_AAA_domain,_and_DNA_restriction-modification_system


id: CL:7212
description: Mixed, incl. DNA alkylation, and DNA helicase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7212_Mixed,_incl._DNA_alkylation,_and_DNA_helicase_activity


id: CL:7225
description: Mixed, incl. PIN domain, and SpoVT-AbrB domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7225_Mixed,_incl._PIN_domain,_and_SpoVT-AbrB_domain


id: CL:7243
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7243_Mostly_uncharacterized,_incl._Protein_of_unknown_function_DUF1275,_and_Phosphoric_ester_hydrolase_activity

description:
  Mostly uncharacterized, incl. Protein of unknown function DUF1275, and Phosphoric ester hydrolase activity


id: CL:7244
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7244_Mostly_uncharacterized,_incl._Protein_of_unknown_function_DUF6428,_and_Phosphoric_ester_hydrolase_activity

description:
  Mostly uncharacterized, incl. Protein of unknown function DUF6428, and Phosphoric ester hydrolase activity


id: CL:7245
description: Mostly uncharacterized, incl. Protein of unknown function DUF1275, and DDE transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7245_Mostly_uncharacterized,_incl._Protein_of_unknown_function_DUF1275,_and_DDE_transposase_sub-family


id: CL:7246
description: Mostly uncharacterized, incl. Protein of unknown function DUF1275, and DDE transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7246_Mostly_uncharacterized,_incl._Protein_of_unknown_function_DUF1275,_and_DDE_transposase_sub-family


id: CL:7248
description: Mostly uncharacterized, incl. DDE transposase sub-family, and Helicase HerA, central domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7248_Mostly_uncharacterized,_incl._DDE_transposase_sub-family,_and_Helicase_HerA,_central_domain


id: CL:7250
description: Mostly uncharacterized, incl. DDE transposase sub-family, and Helicase HerA, central domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7250_Mostly_uncharacterized,_incl._DDE_transposase_sub-family,_and_Helicase_HerA,_central_domain


id: CL:7251
description: Mixed, incl. Haloacid dehalogenase-like hydrolase, and DDE transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7251_Mixed,_incl._Haloacid_dehalogenase-like_hydrolase,_and_DDE_transposase_sub-family


id: CL:7254
description: Mixed, incl. Haloacid dehalogenase-like hydrolase, and AhpD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7254_Mixed,_incl._Haloacid_dehalogenase-like_hydrolase,_and_AhpD-like


id: CL:727
description: Protein targeting to ER, and Ferrous iron transport protein B
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:727_Protein_targeting_to_ER,_and_Ferrous_iron_transport_protein_B


id: CL:7271
description: Mixed, incl. Helicase HerA, central domain, and Corrinoid adenosyltransferase PduO/GlcC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7271_Mixed,_incl._Helicase_HerA,_central_domain,_and_Corrinoid_adenosyltransferase_PduO/GlcC-like


id: CL:7302
description: Mixed, incl. Protein of unknown function DUF1275, and Protein SirB1, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7302_Mixed,_incl._Protein_of_unknown_function_DUF1275,_and_Protein_SirB1,_N-terminal


id: CL:7315
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7315_Mixed,_incl._CocE/Serine_esterase,_and_Type_I_phosphodiesterase/nucleotide_pyrophosphatase/phosphate_transferase

description:
  Mixed, incl. CocE/Serine esterase, and Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase


id: CL:7325
description: Blockage of phagosome acidification, and Protein of unknown function DUF6428
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7325_Blockage_of_phagosome_acidification,_and_Protein_of_unknown_function_DUF6428


id: CL:7341
description: Mixed, incl. Protein of unknown function DUF1275
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7341_Mixed,_incl._Protein_of_unknown_function_DUF1275


id: CL:7350
description: Mixed, incl. Beta-lactamase/transpeptidase-like, and Alpha/Beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7350_Mixed,_incl._Beta-lactamase/transpeptidase-like,_and_Alpha/Beta_hydrolase_fold


id: CL:7351
description: Mixed, incl. Beta-lactamase/transpeptidase-like, and Peptidase M28
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7351_Mixed,_incl._Beta-lactamase/transpeptidase-like,_and_Peptidase_M28


id: CL:7354
description: Beta-lactamase, and Carboxypeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7354_Beta-lactamase,_and_Carboxypeptidase


id: CL:7397
description: Mixed, incl. Peptidase M28, and Carboxylesterase, type B
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7397_Mixed,_incl._Peptidase_M28,_and_Carboxylesterase,_type_B


id: CL:7399
description: Peptidase M28 family, and Dipeptidyl-peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7399_Peptidase_M28_family,_and_Dipeptidyl-peptidase_activity


id: CL:741
description: Mixed, incl. mRNA processing, and RNA degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:741_Mixed,_incl._mRNA_processing,_and_RNA_degradation


id: CL:7412
description: Carboxylesterase, type B, and Peptidase family M28
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7412_Carboxylesterase,_type_B,_and_Peptidase_family_M28


id: CL:742
description: Mixed, incl. mRNA processing, and ATP-dependent RNA helicase DEAD-box, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:742_Mixed,_incl._mRNA_processing,_and_ATP-dependent_RNA_helicase_DEAD-box,_conserved_site


id: CL:7424
description: Mixed, incl. Alpha/beta hydrolase fold, and Sialate O-acetylesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7424_Mixed,_incl._Alpha/beta_hydrolase_fold,_and_Sialate_O-acetylesterase


id: CL:7426
description: Mixed, incl. Alpha/beta hydrolase fold, and Sialate O-acetylesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7426_Mixed,_incl._Alpha/beta_hydrolase_fold,_and_Sialate_O-acetylesterase


id: CL:7428
description: Mixed, incl. Alpha/beta hydrolase fold, and Sialate O-acetylesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7428_Mixed,_incl._Alpha/beta_hydrolase_fold,_and_Sialate_O-acetylesterase


id: CL:7430
description: Mixed, incl. Alpha/beta hydrolase fold, and Sialate O-acetylesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7430_Mixed,_incl._Alpha/beta_hydrolase_fold,_and_Sialate_O-acetylesterase


id: CL:7433
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7433_Mixed,_incl._Sialate_O-acetylesterase,_and_Glycosyl_hydrolase,_five-bladed_beta-propellor_domain_superfamily

description:
  Mixed, incl. Sialate O-acetylesterase, and Glycosyl hydrolase, five-bladed beta-propellor domain superfamily


id: CL:745
description: ATP-dependent RNA helicase DEAD-box, conserved site, and Helicase-associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:745_ATP-dependent_RNA_helicase_DEAD-box,_conserved_site,_and_Helicase-associated_domain


id: CL:7472
description: Mixed, incl. Pectate lyase activity, and Ribonucleoside hydrolase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7472_Mixed,_incl._Pectate_lyase_activity,_and_Ribonucleoside_hydrolase-like


id: CL:7493
description: Mostly uncharacterized, incl. Response to virus, and Ubiquinone
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7493_Mostly_uncharacterized,_incl._Response_to_virus,_and_Ubiquinone


id: CL:7494
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7494_Mostly_uncharacterized,_incl._RNA-directed_DNA_polymerase,_and_Cyclic_nucleotide-binding,_conserved_site

description:
  Mostly uncharacterized, incl. RNA-directed DNA polymerase, and Cyclic nucleotide-binding, conserved site


id: CL:7495
description: Mixed, incl. RNA-directed DNA polymerase, and Ubiquinone
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7495_Mixed,_incl._RNA-directed_DNA_polymerase,_and_Ubiquinone


id: CL:7497
description: Mixed, incl. RNA-directed DNA polymerase, and Ubiquinone
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7497_Mixed,_incl._RNA-directed_DNA_polymerase,_and_Ubiquinone


id: CL:7500
description: Mixed, incl. tRNA 5-end processing, and RNA ligase domain, REL/Rln2
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7500_Mixed,_incl._tRNA_5-end_processing,_and_RNA_ligase_domain,_REL/Rln2


id: CL:7518
description: Mixed, incl. RNA-directed DNA polymerase, and Transglycosylase associated protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7518_Mixed,_incl._RNA-directed_DNA_polymerase,_and_Transglycosylase_associated_protein


id: CL:7533
description: Mixed, incl. Positive regulation of molecular function, and ATP hydrolysis activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7533_Mixed,_incl._Positive_regulation_of_molecular_function,_and_ATP_hydrolysis_activity


id: CL:7543
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7543_Mixed,_incl._Cyclic_nucleotide-binding,_conserved_site,_and_Peptidase_S8,_subtilisin,_Ser-active_site

description:
  Mixed, incl. Cyclic nucleotide-binding, conserved site, and Peptidase S8, subtilisin, Ser-active site


id: CL:7545
description: Mixed, incl. Cyclic nucleotide-binding, conserved site, and Calcineurin-like phosphoesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7545_Mixed,_incl._Cyclic_nucleotide-binding,_conserved_site,_and_Calcineurin-like_phosphoesterase


id: CL:7573
description: Mixed, incl. Response to virus, and Nucleoside salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7573_Mixed,_incl._Response_to_virus,_and_Nucleoside_salvage


id: CL:7575
description: Response to virus, and Nucleoside salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7575_Response_to_virus,_and_Nucleoside_salvage


id: CL:7592
description: Transporter activity, and Methane metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7592_Transporter_activity,_and_Methane_metabolism


id: CL:7595
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7595_Mixed,_incl._RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain,_and_Acriflavin_resistance_protein

description:
  Mixed, incl. RND efflux pump, membrane fusion protein, barrel-sandwich domain, and Acriflavin resistance protein


id: CL:7596
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7596_Mixed,_incl._RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain,_and_Acriflavin_resistance_protein

description:
  Mixed, incl. RND efflux pump, membrane fusion protein, barrel-sandwich domain, and Acriflavin resistance protein


id: CL:7598
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7598_Mixed,_incl._RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain,_and_Acriflavin_resistance_protein

description:
  Mixed, incl. RND efflux pump, membrane fusion protein, barrel-sandwich domain, and Acriflavin resistance protein


id: CL:7599
description: Acriflavin resistance protein, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7599_Acriflavin_resistance_protein,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:760
description: RNA recognition motif, and Beta-Casp domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:760_RNA_recognition_motif,_and_Beta-Casp_domain


id: CL:7601
description: Acriflavin resistance protein, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7601_Acriflavin_resistance_protein,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:7603
description: Acriflavin resistance protein, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7603_Acriflavin_resistance_protein,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:7605
description: AcrB/AcrD/AcrF family, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7605_AcrB/AcrD/AcrF_family,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:7608
description: AcrB/AcrD/AcrF family, and Barrel-sandwich domain of CusB or HlyD membrane-fusion
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7608_AcrB/AcrD/AcrF_family,_and_Barrel-sandwich_domain_of_CusB_or_HlyD_membrane-fusion


id: CL:7634
description: Acriflavin resistance protein, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7634_Acriflavin_resistance_protein,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:7659
description: MMPL family, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7659_MMPL_family,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:7661
description: MMPL family, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7661_MMPL_family,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:7663
description: MMPL family, and Membrane fusion protein, biotin-lipoyl like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7663_MMPL_family,_and_Membrane_fusion_protein,_biotin-lipoyl_like_domain


id: CL:7666
description: Mixed, incl. Palmitate, and Sterol-sensing domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7666_Mixed,_incl._Palmitate,_and_Sterol-sensing_domain


id: CL:769
description: Mixed, incl. Exoribonuclease activity, and HRDC domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:769_Mixed,_incl._Exoribonuclease_activity,_and_HRDC_domain


id: CL:7706
description: Outer membrane efflux protein, and Membrane fusion protein, biotin-lipoyl like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7706_Outer_membrane_efflux_protein,_and_Membrane_fusion_protein,_biotin-lipoyl_like_domain


id: CL:7721
description: FtsX-like permease family, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7721_FtsX-like_permease_family,_and_MacB,_ATP-binding_domain


id: CL:7723
description: FtsX-like permease family, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1632864_STRINGid_CL:7723_FtsX-like_permease_family,_and_MacB,_ATP-binding_domain


