# geneInfo

ensembl_gene_id: XD41_0006
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: XD41_0010
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: XD41_0013
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: XD41_0024
symbol: XD41_0024
gene_biotype: protein_coding
description:
  Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: XD41_0025
symbol: XD41_0025
gene_biotype: protein_coding
description:
  ABC-type transporter, integral membrane subunit; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: XD41_0041
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: XD41_0042
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: XD41_0043
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: XD41_0044
symbol: XD41_0044
gene_biotype: protein_coding
description:
  30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.


ensembl_gene_id: XD41_0051
symbol: XD41_0051
gene_biotype: protein_coding
description:
  Histone family protein DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: XD41_0052
symbol: rlpA
gene_biotype: protein_coding
description:
  Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: XD41_0053
symbol: XD41_0053
gene_biotype: protein_coding
description:
  Cyclic pyranopterin monophosphate synthase; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: XD41_0057
symbol: hemA
gene_biotype: protein_coding
description:
  Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: XD41_0060
symbol: yidC
gene_biotype: protein_coding
description:
  Membrane protein insertase YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: XD41_0062
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase MnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: XD41_0064
symbol: XD41_0064
gene_biotype: protein_coding
description:
  Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: XD41_0079
symbol: XD41_0079
gene_biotype: protein_coding
description:
  Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: XD41_0081
symbol: XD41_0081
gene_biotype: protein_coding
description:
  Acylphosphatase; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide.


ensembl_gene_id: XD41_0093
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: XD41_0120
symbol: XD41_0120
gene_biotype: protein_coding
description:
  ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: XD41_0140
symbol: cas1
gene_biotype: protein_coding
description:
  CRISPR-associated endonuclease Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: XD41_0141
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated endoribonuclease Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: XD41_0149
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: XD41_0156
symbol: XD41_0156
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: XD41_0160
symbol: XD41_0160
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: XD41_0162
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein radA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: XD41_0164
symbol: XD41_0164
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase/homocitrate synthase family protein; Belongs to the alpha-IPM synthase/homocitrate synthase family.


ensembl_gene_id: XD41_0168
symbol: nnrE
gene_biotype: protein_coding
description:
  Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...]


ensembl_gene_id: XD41_0169
symbol: acpS
gene_biotype: protein_coding
description:
  Holo-[acyl-carrier-protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: XD41_0170
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: XD41_0176
symbol: ispDF
gene_biotype: protein_coding
description:
  Bifunctional enzyme IspD/IspF; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF).


ensembl_gene_id: XD41_0183
symbol: yajC
gene_biotype: protein_coding
description:
  SecYEG protein translocase auxillary subunit; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.


ensembl_gene_id: XD41_0184
symbol: secD
gene_biotype: protein_coding
description:
  Protein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: XD41_0185
symbol: secF
gene_biotype: protein_coding
description:
  Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: XD41_0190
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: XD41_0191
symbol: lptD
gene_biotype: protein_coding
description:
  Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.


ensembl_gene_id: XD41_0199
symbol: XD41_0199
gene_biotype: protein_coding
description:
  ATPase-like, ParA/MinD; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: XD41_0225
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: XD41_0231
symbol: surE
gene_biotype: protein_coding
description:
  5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: XD41_0232
symbol: XD41_0232
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: XD41_0235
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: XD41_0248
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: XD41_0254
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP-dependent clade 'X' sub-subfamily.


ensembl_gene_id: XD41_0271
symbol: cbiA
gene_biotype: protein_coding
description:
  Cobyrinic acid A,C-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: XD41_0282
symbol: coaD
gene_biotype: protein_coding
description:
  Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: XD41_0284
symbol: lspA
gene_biotype: protein_coding
description:
  Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: XD41_0285
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: XD41_0287
symbol: cpoB
gene_biotype: protein_coding
description:
  Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.


ensembl_gene_id: XD41_0292
symbol: groS
gene_biotype: protein_coding
description:
  10 kDa chaperonin; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: XD41_0293
symbol: groL
gene_biotype: protein_coding
description:
  60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: XD41_0294
symbol: cobQ
gene_biotype: protein_coding
description:
  Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: XD41_0300
symbol: lon
gene_biotype: protein_coding
description:
  Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: XD41_0301
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: XD41_0302
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: XD41_0303
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: XD41_0310
symbol: XD41_0310
gene_biotype: protein_coding
description:
  (Uracil-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: XD41_0314
symbol: cbiD
gene_biotype: protein_coding
description:
  Putative cobalt-precorrin-6A synthase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.


ensembl_gene_id: XD41_0316
symbol: XD41_0316
gene_biotype: protein_coding
description:
  Sirohydrochlorin cobaltochelatase CbiKP; Catalyzes the insertion of Co(2+) into sirohydrochlorin. Belongs to the CbiK family.


ensembl_gene_id: XD41_0320
symbol: ahcY
gene_biotype: protein_coding
description:
  Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: XD41_0321
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: XD41_0323
symbol: panD
gene_biotype: protein_coding
description:
  Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: XD41_0324
symbol: panC
gene_biotype: protein_coding
description:
  Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: XD41_0326
symbol: secA
gene_biotype: protein_coding
description:
  Protein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: XD41_0330
symbol: XD41_0330
gene_biotype: protein_coding
description:
  ABC-type transporter, integral membrane subunit; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: XD41_0332
symbol: lepA
gene_biotype: protein_coding
description:
  Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: XD41_0333
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: XD41_0342
symbol: argJ
gene_biotype: protein_coding
description:
  Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: XD41_0346
symbol: XD41_0346
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, inner membrane subunit PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: XD41_0349
symbol: XD41_0349
gene_biotype: protein_coding
description:
  Phosphate-specific transport system accessory protein PhoU; Plays a role in the regulation of phosphate uptake.


ensembl_gene_id: XD41_0350
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, ATPase subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: XD41_0361
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: XD41_0374
symbol: XD41_0374
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: XD41_0377
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: XD41_0382
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: XD41_0383
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: XD41_0387
symbol: fliW
gene_biotype: protein_coding
description:
  Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.


ensembl_gene_id: XD41_0388
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator-like protein; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.


ensembl_gene_id: XD41_0393
symbol: flgI
gene_biotype: protein_coding
description:
  Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: XD41_0394
symbol: flgH
gene_biotype: protein_coding
description:
  Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: XD41_0398
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: XD41_0401
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: XD41_0403
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: XD41_0405
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: XD41_0406
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: XD41_0407
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: XD41_0411
symbol: XD41_0411
gene_biotype: protein_coding
description:
  RfaE bifunctional protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose.


ensembl_gene_id: XD41_0428
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: XD41_0441
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: XD41_0442
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: XD41_0444
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: XD41_0445
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual componen [...]


ensembl_gene_id: XD41_0448
symbol: rimM
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: XD41_0449
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: XD41_0450
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: XD41_0456
symbol: XD41_0456
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: XD41_0457
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: XD41_0463
symbol: tadA
gene_biotype: protein_coding
description:
  CMP/dCMP deaminase zinc-binding; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: XD41_0472
symbol: cheB
gene_biotype: protein_coding
description:
  Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: XD41_0474
symbol: XD41_0474
gene_biotype: protein_coding
description:
  Carbamoyl-phosphate synthase L chain ATP-binding; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.


ensembl_gene_id: XD41_0477
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: XD41_0478
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: XD41_0488
symbol: tatA
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: XD41_0492
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: XD41_0494
symbol: XD41_0494
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: XD41_0495
symbol: XD41_0495
gene_biotype: protein_coding
description:
  AMP-dependent synthetase and ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).


ensembl_gene_id: XD41_0496
symbol: purE
gene_biotype: protein_coding
description:
  N5-carboxyaminoimidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: XD41_0497
symbol: XD41_0497
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: XD41_0502
symbol: kdsB
gene_biotype: protein_coding
description:
  3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: XD41_0503
symbol: XD41_0503
gene_biotype: protein_coding
description:
  Three-deoxy-D-manno-octulosonic-acid transferase domain protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: XD41_0504
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: XD41_0509
symbol: proS
gene_biotype: protein_coding
description:
  Proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacy [...]


ensembl_gene_id: XD41_0514
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase 2; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]


ensembl_gene_id: XD41_0516
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: XD41_0517
symbol: bioD
gene_biotype: protein_coding
description:
  ATP-dependent dethiobiotin synthetase BioD; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: XD41_0518
symbol: bioA
gene_biotype: protein_coding
description:
  Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.


ensembl_gene_id: XD41_0521
symbol: XD41_0521
gene_biotype: protein_coding
description:
  Lytic transglycosylase catalytic; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella. In the N-terminal section; belongs to the bacterial solute- binding protein 3 family.


ensembl_gene_id: XD41_0525
symbol: coaX
gene_biotype: protein_coding
description:
  Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: XD41_0526
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: XD41_0527
symbol: folD
gene_biotype: protein_coding
description:
  Bifunctional protein FolD; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: XD41_0534
symbol: lpxA
gene_biotype: protein_coding
description:
  Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: XD41_0535
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: XD41_0536
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-acylglucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: XD41_0538
symbol: bamA
gene_biotype: protein_coding
description:
  Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: XD41_0539
symbol: lolD
gene_biotype: protein_coding
description:
  Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.


ensembl_gene_id: XD41_0545
symbol: XD41_0545
gene_biotype: protein_coding
description:
  Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: XD41_0546
symbol: rsmA
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: XD41_0551
symbol: XD41_0551
gene_biotype: protein_coding
description:
  Putative thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.


ensembl_gene_id: XD41_0555
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: XD41_0561
symbol: XD41_0561
gene_biotype: protein_coding
description:
  SSS sodium solute transporter superfamily; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: XD41_0567
symbol: gltX
gene_biotype: protein_coding
description:
  Glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: XD41_0570
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: XD41_0575
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: XD41_0577
symbol: XD41_0577
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: XD41_0584
symbol: cobT
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: XD41_0594
symbol: XD41_0594
gene_biotype: protein_coding
description:
  Flagellar hook-associated 2 domain-containing protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: XD41_0600
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: XD41_0601
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase 1; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: XD41_0602
symbol: trmH
gene_biotype: protein_coding
description:
  tRNA guanosine-2'-O-methyltransferase; Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: XD41_0604
symbol: XD41_0604
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.


ensembl_gene_id: XD41_0606
symbol: argD
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: XD41_0607
symbol: XD41_0607
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase, FAD-dependent; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: XD41_0611
symbol: XD41_0611
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.


ensembl_gene_id: XD41_0617
symbol: pheT
gene_biotype: protein_coding
description:
  Phenylalanine--tRNA ligase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: XD41_0618
symbol: pheS
gene_biotype: protein_coding
description:
  Phenylalanine--tRNA ligase alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: XD41_0619
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: XD41_0621
symbol: XD41_0621
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: XD41_0627
symbol: trmFO
gene_biotype: protein_coding
description:
  Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.


ensembl_gene_id: XD41_0630
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: XD41_0631
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: XD41_0635
symbol: XD41_0635
gene_biotype: protein_coding
description:
  Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: XD41_0639
symbol: ilvE
gene_biotype: protein_coding
description:
  Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: XD41_0640
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: XD41_0641
symbol: XD41_0641
gene_biotype: protein_coding
description:
  Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: XD41_0642
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: XD41_0646
symbol: XD41_0646
gene_biotype: protein_coding
description:
  Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.


ensembl_gene_id: XD41_0654
symbol: XD41_0654
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: XD41_0658
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: XD41_0660
symbol: tatA-2
gene_biotype: protein_coding
description:
  Twin-arginine translocation protein, TatB subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: XD41_0661
symbol: tatC
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: XD41_0664
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.


ensembl_gene_id: XD41_0670
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: XD41_0677
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: XD41_0678
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: XD41_0683
symbol: XD41_0683
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine.


ensembl_gene_id: XD41_0707
symbol: lpxK
gene_biotype: protein_coding
description:
  Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: XD41_0708
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: XD41_0709
symbol: xerC
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: XD41_0717
symbol: XD41_0717
gene_biotype: protein_coding
description:
  Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: XD41_0718
symbol: XD41_0718
gene_biotype: protein_coding
description:
  RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family, permease family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: XD41_0738
symbol: XD41_0738
gene_biotype: protein_coding
description:
  Hypothetical protein; Related to potassium efflux transporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: XD41_0753
symbol: clpB
gene_biotype: protein_coding
description:
  ATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: XD41_0764
symbol: XD41_0764
gene_biotype: protein_coding
description:
  ABC-type metal ion transporter, periplasmic subunit; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: XD41_0767
symbol: pal
gene_biotype: protein_coding
description:
  Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: XD41_0784
symbol: XD41_0784
gene_biotype: protein_coding
description:
  Putative phosphoribose diphosphate:decaprenyl-phosphate; Belongs to the UbiA prenyltransferase family.


ensembl_gene_id: XD41_0789
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: XD41_0790
symbol: XD41_0790
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: XD41_0794
symbol: hldD
gene_biotype: protein_coding
description:
  ADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily.


ensembl_gene_id: XD41_0796
symbol: gpmI
gene_biotype: protein_coding
description:
  2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: XD41_0797
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: XD41_0803
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: XD41_0804
symbol: dnaJ
gene_biotype: protein_coding
description:
  Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]


ensembl_gene_id: XD41_0805
symbol: moaC
gene_biotype: protein_coding
description:
  Cyclic pyranopterin monophosphate synthase accessory protein; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: XD41_0807
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: XD41_0808
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: XD41_0810
symbol: XD41_0810
gene_biotype: protein_coding
description:
  Nitrogen fixation protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.


ensembl_gene_id: XD41_0811
symbol: XD41_0811
gene_biotype: protein_coding
description:
  Cysteine desulfurase NifS; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine.


ensembl_gene_id: XD41_0815
symbol: ybeY
gene_biotype: protein_coding
description:
  Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: XD41_0817
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase proenzyme; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: XD41_0818
symbol: XD41_0818
gene_biotype: protein_coding
description:
  CDP-diacylglycerol/serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: XD41_0819
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: XD41_0820
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: XD41_0821
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.


ensembl_gene_id: XD41_0822
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: XD41_0841
symbol: XD41_0841
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: XD41_0847
symbol: XD41_0847
gene_biotype: protein_coding
description:
  Phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).


ensembl_gene_id: XD41_0848
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: XD41_0853
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: XD41_0863
symbol: mqnA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: XD41_0868
symbol: ade
gene_biotype: protein_coding
description:
  Adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.


ensembl_gene_id: XD41_0874
symbol: XD41_0874
gene_biotype: protein_coding
description:
  Polynucleotide adenylyltransferase region; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: XD41_0875
symbol: ubiX
gene_biotype: protein_coding
description:
  3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: XD41_0898
symbol: nusB
gene_biotype: protein_coding
description:
  N utilization substance protein B-like protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: XD41_0899
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: XD41_0900
symbol: ribBA
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: XD41_0902
symbol: XD41_0902
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: XD41_0904
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: XD41_0905
symbol: XD41_0905
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: XD41_0907
symbol: XD41_0907
gene_biotype: protein_coding
description:
  3-oxoacyl-(Acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: XD41_0908
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase 3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: XD41_0909
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: XD41_0924
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: XD41_0926
symbol: XD41_0926
gene_biotype: protein_coding
description:
  Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: XD41_0927
symbol: mltG
gene_biotype: protein_coding
description:
  Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.


ensembl_gene_id: XD41_0948
symbol: XD41_0948
gene_biotype: protein_coding
description:
  Formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: XD41_0951
symbol: XD41_0951
gene_biotype: protein_coding
description:
  tRNA (Adenine-N(1)-)-methyltransferase; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA.


ensembl_gene_id: XD41_0954
symbol: queH
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).


ensembl_gene_id: XD41_0955
symbol: XD41_0955
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: XD41_0960
symbol: ureG
gene_biotype: protein_coding
description:
  Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.


ensembl_gene_id: XD41_0961
symbol: ureF
gene_biotype: protein_coding
description:
  Urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.


ensembl_gene_id: XD41_0962
symbol: ureE
gene_biotype: protein_coding
description:
  Urease accessory protein UreE; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.


ensembl_gene_id: XD41_0966
symbol: ureD
gene_biotype: protein_coding
description:
  Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.


ensembl_gene_id: XD41_0969
symbol: XD41_0969
gene_biotype: protein_coding
description:
  Urea ABC transporter, permease protein UrtC; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: XD41_0970
symbol: XD41_0970
gene_biotype: protein_coding
description:
  Urea ABC transporter, permease protein UrtB; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: XD41_0974
symbol: XD41_0974
gene_biotype: protein_coding
description:
  Extracellular solute-binding protein family 1; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.


ensembl_gene_id: XD41_0983
symbol: nadD
gene_biotype: protein_coding
description:
  Putative nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: XD41_0986
symbol: murJ
gene_biotype: protein_coding
description:
  Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: XD41_0989
symbol: hslV
gene_biotype: protein_coding
description:
  ATP-dependent protease subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: XD41_0990
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent protease ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: XD41_0991
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: XD41_0993
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: XD41_0999
symbol: XD41_0999
gene_biotype: protein_coding
description:
  RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: XD41_1000
symbol: hpf
gene_biotype: protein_coding
description:
  Sigma 54 modulation protein/ribosomal protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: XD41_1006
symbol: XD41_1006
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: XD41_1021
symbol: XD41_1021
gene_biotype: protein_coding
description:
  Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: XD41_1024
symbol: XD41_1024
gene_biotype: protein_coding
description:
  Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: XD41_1027
symbol: hflX
gene_biotype: protein_coding
description:
  GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: XD41_1028
symbol: plsY
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: XD41_1030
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: XD41_1031
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: XD41_1034
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: XD41_1038
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: XD41_1041
symbol: aroA-2
gene_biotype: protein_coding
description:
  Putative phospho-2-dehydro-3-deoxyheptonate aldolase; Catalyzes a transaldol reaction between 6-deoxy-5- ketofructose 1-phosphate (DKFP) and L-aspartate semialdehyde (ASA) with an elimination of hydroxypyruvaldehyde phosphate to yield 2-amino-3,7- dideoxy-D-threo-hept-6-ulosonate (ADH). Plays a key role in an alternative pathway of the biosynthesis of 3-dehydroquinate (DHQ), which is involved in the canonical pathway for the biosynthesis of aromatic amino acids.


ensembl_gene_id: XD41_1069
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: XD41_1070
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: XD41_1074
symbol: XD41_1074
gene_biotype: protein_coding
description:
  Outer membrane efflux protein; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.


ensembl_gene_id: XD41_1083
symbol: mrdB
gene_biotype: protein_coding
description:
  Rod shape-determining protein rodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: XD41_1085
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: XD41_1087
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: XD41_1088
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: XD41_1089
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: XD41_1090
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: XD41_1091
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase epsilon chain; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: XD41_1092
symbol: glmU
gene_biotype: protein_coding
description:
  Bifunctional protein GlmU; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: XD41_1097
symbol: tyrS
gene_biotype: protein_coding
description:
  Tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.


ensembl_gene_id: XD41_1107
symbol: rsmG
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.


ensembl_gene_id: XD41_1109
symbol: trpS
gene_biotype: protein_coding
description:
  Tryptophan--tRNA ligase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: XD41_1112
symbol: uvrC
gene_biotype: protein_coding
description:
  UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: XD41_1116
symbol: rlmH
gene_biotype: protein_coding
description:
  Putative ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: XD41_1117
symbol: sucD
gene_biotype: protein_coding
description:
  Succinyl-CoA ligase [ADP-forming] subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: XD41_1118
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: XD41_1120
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: XD41_1130
symbol: XD41_1130
gene_biotype: protein_coding
description:
  Non-canonical purine NTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: XD41_1131
symbol: glmS
gene_biotype: protein_coding
description:
  Glutamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: XD41_1134
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: XD41_1137
symbol: XD41_1137
gene_biotype: protein_coding
description:
  Lactate dehydrogenase-like oxidoreductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: XD41_1139
symbol: XD41_1139
gene_biotype: protein_coding
description:
  CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: XD41_1142
symbol: XD41_1142
gene_biotype: protein_coding
description:
  Quinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: XD41_1143
symbol: XD41_1143
gene_biotype: protein_coding
description:
  Fumarate reductase/succinate dehydrogenase flavoprotein domain protein; Catalyzes the oxidation of L-aspartate to iminoaspartate.


ensembl_gene_id: XD41_1145
symbol: trmJ
gene_biotype: protein_coding
description:
  tRNA/rRNA methyltransferase (SpoU); Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.


ensembl_gene_id: XD41_1157
symbol: XD41_1157
gene_biotype: protein_coding
description:
  Type 4 prepilin-like proteins leader peptide-processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.


ensembl_gene_id: XD41_1158
symbol: XD41_1158
gene_biotype: protein_coding
description:
  Formate dehydrogenase accessory protein; Necessary for formate dehydrogenase activity. Belongs to the FdhE family.


ensembl_gene_id: XD41_1160
symbol: mobA
gene_biotype: protein_coding
description:
  Molybdenum cofactor guanylyltransferase; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.


ensembl_gene_id: XD41_1162
symbol: XD41_1162
gene_biotype: protein_coding
description:
  CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: XD41_1167
symbol: XD41_1167
gene_biotype: protein_coding
description:
  Septum formation initiator; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: XD41_1173
symbol: tsaD
gene_biotype: protein_coding
description:
  Putative tRNA threonylcarbamoyladenosine biosynthesis protein Gcp; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: XD41_1177
symbol: bamD
gene_biotype: protein_coding
description:
  Outer membrane assembly lipoprotein YfiO; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: XD41_1189
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: XD41_1190
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein ftsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: XD41_1194
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: XD41_1196
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: XD41_1197
symbol: mraY
gene_biotype: protein_coding
description:
  Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: XD41_1198
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: XD41_1199
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: XD41_1202
symbol: rsmH
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: XD41_1217
symbol: XD41_1217
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: XD41_1219
symbol: ftsE
gene_biotype: protein_coding
description:
  Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: XD41_1222
symbol: XD41_1222
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: XD41_1228
symbol: XD41_1228
gene_biotype: protein_coding
description:
  Formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: XD41_1242
symbol: rnj
gene_biotype: protein_coding
description:
  RNA-metabolising metallo-beta-lactamase; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: XD41_1251
symbol: XD41_1251
gene_biotype: protein_coding
description:
  Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: XD41_1253
symbol: nadE
gene_biotype: protein_coding
description:
  NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: XD41_1256
symbol: XD41_1256
gene_biotype: protein_coding
description:
  Chemotaxis protein methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.


ensembl_gene_id: XD41_1262
symbol: XD41_1262
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids.


ensembl_gene_id: XD41_1266
symbol: rlmN
gene_biotype: protein_coding
description:
  Dual-specificity RNA methyltransferase RlmN; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: XD41_1267
symbol: hisI
gene_biotype: protein_coding
description:
  Phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.


ensembl_gene_id: XD41_1268
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily.


ensembl_gene_id: XD41_1275
symbol: XD41_1275
gene_biotype: protein_coding
description:
  (P)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: XD41_1304
symbol: lipB
gene_biotype: protein_coding
description:
  Octanoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: XD41_1305
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: XD41_1313
symbol: dapB
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: XD41_1314
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: XD41_1316
symbol: proA
gene_biotype: protein_coding
description:
  Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: XD41_1326
symbol: XD41_1326
gene_biotype: protein_coding
description:
  Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: XD41_1333
symbol: XD41_1333
gene_biotype: protein_coding
description:
  Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: XD41_1335
symbol: XD41_1335
gene_biotype: protein_coding
description:
  Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.


ensembl_gene_id: XD41_1336
symbol: XD41_1336
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: XD41_1337
symbol: XD41_1337
gene_biotype: protein_coding
description:
  8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.


ensembl_gene_id: XD41_1347
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: XD41_1352
symbol: recA
gene_biotype: protein_coding
description:
  Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: XD41_1354
symbol: XD41_1354
gene_biotype: protein_coding
description:
  Putative nickel-responsive regulator; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family.


ensembl_gene_id: XD41_1357
symbol: gpt
gene_biotype: protein_coding
description:
  Xanthine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.


ensembl_gene_id: XD41_1363
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...]


ensembl_gene_id: XD41_1369
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: XD41_1370
symbol: XD41_1370
gene_biotype: protein_coding
description:
  Molybdenum cofactor synthesis domain protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: XD41_1373
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: XD41_1388
symbol: XD41_1388
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: XD41_1396
symbol: pcm
gene_biotype: protein_coding
description:
  Protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.


ensembl_gene_id: XD41_1398
symbol: XD41_1398
gene_biotype: protein_coding
description:
  Mrp protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: XD41_1400
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: XD41_1401
symbol: XD41_1401
gene_biotype: protein_coding
description:
  Transcription termination/antitermination protein nusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: XD41_1405
symbol: XD41_1405
gene_biotype: protein_coding
description:
  Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.


ensembl_gene_id: XD41_1407
symbol: XD41_1407
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: XD41_1411
symbol: mqnC
gene_biotype: protein_coding
description:
  Radical SAM domain protein; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: XD41_1416
symbol: XD41_1416
gene_biotype: protein_coding
description:
  Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: XD41_1429
symbol: XD41_1429
gene_biotype: protein_coding
description:
  Putative cation/multidrug efflux pump of the AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: XD41_1433
symbol: aroK-2
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: XD41_1439
symbol: gmhA
gene_biotype: protein_coding
description:
  Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.


ensembl_gene_id: XD41_1441
symbol: hemC
gene_biotype: protein_coding
description:
  Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: XD41_1443
symbol: thyX
gene_biotype: protein_coding
description:
  Thymidylate synthase ThyX; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: XD41_1444
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: XD41_1445
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: XD41_1446
symbol: ruvC
gene_biotype: protein_coding
description:
  Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: XD41_1448
symbol: rlmE
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.


ensembl_gene_id: XD41_1452
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: XD41_1459
symbol: gatA
gene_biotype: protein_coding
description:
  Glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: XD41_1460
symbol: gatC
gene_biotype: protein_coding
description:
  Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: XD41_1463
symbol: grpE
gene_biotype: protein_coding
description:
  Protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...]


ensembl_gene_id: XD41_1464
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor hrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: XD41_1465
symbol: XD41_1465
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.


ensembl_gene_id: XD41_1466
symbol: XD41_1466
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: XD41_1472
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: XD41_1474
symbol: XD41_1474
gene_biotype: protein_coding
description:
  Isoprenyl transferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: XD41_1475
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: XD41_1477
symbol: tsf
gene_biotype: protein_coding
description:
  Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: XD41_1489
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: XD41_1492
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: XD41_1494
symbol: dacA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: XD41_1495
symbol: XD41_1495
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: XD41_1496
symbol: ftsH
gene_biotype: protein_coding
description:
  ATP-dependent zinc metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: XD41_1499
symbol: XD41_1499
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase, catabolic; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: XD41_1520
symbol: coaE
gene_biotype: protein_coding
description:
  Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: XD41_1521
symbol: argB
gene_biotype: protein_coding
description:
  Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: XD41_1528
symbol: mutS2
gene_biotype: protein_coding
description:
  Smr protein/MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: XD41_1529
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: XD41_1530
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: XD41_1537
symbol: valS
gene_biotype: protein_coding
description:
  Valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: XD41_1539
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: XD41_1571
symbol: XD41_1571
gene_biotype: protein_coding
description:
  Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily.


ensembl_gene_id: XD41_1600
symbol: selA
gene_biotype: protein_coding
description:
  L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.


ensembl_gene_id: XD41_1614
symbol: speH
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.


ensembl_gene_id: XD41_1615
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: XD41_1621
symbol: XD41_1621
gene_biotype: protein_coding
description:
  RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: XD41_1624
symbol: XD41_1624
gene_biotype: protein_coding
description:
  Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family.  In the N-terminal section; belongs to the proline dehydrogenase family.


ensembl_gene_id: XD41_1646
symbol: serS
gene_biotype: protein_coding
description:
  Serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: XD41_1654
symbol: ubiE
gene_biotype: protein_coding
description:
  Ubiquinone/menaquinone biosynthesis methyltransferase ubiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).


ensembl_gene_id: XD41_1656
symbol: XD41_1656
gene_biotype: protein_coding
description:
  UDP-glucose/GDP-mannose dehydrogenase family protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: XD41_1657
symbol: mqnB
gene_biotype: protein_coding
description:
  Purine or other phosphorylase family 1; Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: XD41_1711
symbol: fmt
gene_biotype: protein_coding
description:
  Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: XD41_1712
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: XD41_1713
symbol: aspS
gene_biotype: protein_coding
description:
  Aspartate--tRNA ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: XD41_1717
symbol: XD41_1717
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: XD41_1718
symbol: XD41_1718
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: XD41_1726
symbol: XD41_1726
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: XD41_1734
symbol: ileS
gene_biotype: protein_coding
description:
  Isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: XD41_1741
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: XD41_1754
symbol: XD41_1754
gene_biotype: protein_coding
description:
  Indolepyruvate ferredoxin oxidoreductase, alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.


ensembl_gene_id: XD41_1757
symbol: nadK
gene_biotype: protein_coding
description:
  Putative inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: XD41_1761
symbol: gatB
gene_biotype: protein_coding
description:
  Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: XD41_1762
symbol: mtnA
gene_biotype: protein_coding
description:
  Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: XD41_1763
symbol: thi4
gene_biotype: protein_coding
description:
  Putative thiazole biosynthetic enzyme; Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur.


ensembl_gene_id: XD41_1779
symbol: XD41_1779
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: XD41_1784
symbol: XD41_1784
gene_biotype: protein_coding
description:
  Fmu (Sun) domain protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: XD41_1792
symbol: XD41_1792
gene_biotype: protein_coding
description:
  Electron-transferring-flavoprotein dehydrogenase; Part of an electron transfer system. Belongs to the ETF-QO/FixC family.


ensembl_gene_id: XD41_1794
symbol: engB
gene_biotype: protein_coding
description:
  Putative GTP-binding protein EngB; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: XD41_1796
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: XD41_1797
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: XD41_1804
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.


ensembl_gene_id: XD41_1806
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease 7 small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: XD41_1809
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease 7 large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: XD41_1817
symbol: XD41_1817
gene_biotype: protein_coding
description:
  Putative glycine dehydrogenase [decarboxylating] subunit 1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.


ensembl_gene_id: XD41_1818
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: XD41_1820
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: XD41_1827
symbol: XD41_1827
gene_biotype: protein_coding
description:
  Putative flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: XD41_1832
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: XD41_1835
symbol: uvrB
gene_biotype: protein_coding
description:
  UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...]


ensembl_gene_id: XD41_1838
symbol: XD41_1838
gene_biotype: protein_coding
description:
  ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.


ensembl_gene_id: XD41_1839
symbol: mtaD
gene_biotype: protein_coding
description:
  5-methylthioadenosine/S-adenosylhomocysteine deaminase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family.


ensembl_gene_id: XD41_1851
symbol: XD41_1851
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain.


ensembl_gene_id: XD41_1852
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: XD41_1854
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: XD41_1855
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: XD41_1857
symbol: XD41_1857
gene_biotype: protein_coding
description:
  NADH-ubiquinone/plastoquinone oxidoreductase chain 6; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: XD41_1858
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: XD41_1863
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: XD41_1867
symbol: rpsL
gene_biotype: protein_coding
description:
  30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: XD41_1868
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: XD41_1870
symbol: rplL
gene_biotype: protein_coding
description:
  50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: XD41_1871
symbol: rplJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: XD41_1872
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: XD41_1873
symbol: rplK
gene_biotype: protein_coding
description:
  Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: XD41_1877
symbol: XD41_1877
gene_biotype: protein_coding
description:
  Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: XD41_1922
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: XD41_1923
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: XD41_1924
symbol: rplY
gene_biotype: protein_coding
description:
  50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: XD41_1925
symbol: pth
gene_biotype: protein_coding
description:
  Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: XD41_1927
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: XD41_1933
symbol: queF
gene_biotype: protein_coding
description:
  NADPH-dependent 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.


ensembl_gene_id: XD41_1934
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: XD41_1935
symbol: prmC
gene_biotype: protein_coding
description:
  Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: XD41_1936
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: XD41_1939
symbol: rex
gene_biotype: protein_coding
description:
  Redox-sensing transcriptional repressor rex; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: XD41_1950
symbol: XD41_1950
gene_biotype: protein_coding
description:
  Protein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. Belongs to the S [...]


ensembl_gene_id: XD41_1951
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: XD41_1953
symbol: rpsE
gene_biotype: protein_coding
description:
  30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: XD41_1954
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: XD41_1955
symbol: rplF
gene_biotype: protein_coding
description:
  50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: XD41_1956
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: XD41_1958
symbol: rplE
gene_biotype: protein_coding
description:
  50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: XD41_1959
symbol: rplX
gene_biotype: protein_coding
description:
  50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: XD41_1960
symbol: rplN
gene_biotype: protein_coding
description:
  50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: XD41_1961
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: XD41_1963
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: XD41_1964
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: XD41_1965
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: XD41_1966
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: XD41_1967
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: XD41_1968
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: XD41_1970
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: XD41_1971
symbol: rpsJ
gene_biotype: protein_coding
description:
  30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: XD41_1973
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: XD41_1974
symbol: obg
gene_biotype: protein_coding
description:
  GTPase obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: XD41_1977
symbol: rplU
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: XD41_1985
symbol: dapA
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: XD41_1987
symbol: pyrR
gene_biotype: protein_coding
description:
  Bifunctional protein PyrR; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.


ensembl_gene_id: XD41_1990
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: XD41_2001
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: XD41_2009
symbol: XD41_2009
gene_biotype: protein_coding
description:
  Alanine racemase domain protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: XD41_2010
symbol: era
gene_biotype: protein_coding
description:
  GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: XD41_2025
symbol: XD41_2025
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas6; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA).


ensembl_gene_id: XD41_2030
symbol: XD41_2030
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas4; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.


ensembl_gene_id: XD41_2031
symbol: cas1-2
gene_biotype: protein_coding
description:
  CRISPR-associated endonuclease Cas1 2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: XD41_2036
symbol: clpS
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease adapter protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: XD41_2038
symbol: aat
gene_biotype: protein_coding
description:
  Leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: XD41_2042
symbol: gcvPB
gene_biotype: protein_coding
description:
  Glycine dehydrogenase (Decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily.


ensembl_gene_id: XD41_2044
symbol: XD41_2044
gene_biotype: protein_coding
description:
  Hypothetical protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: XD41_2045
symbol: XD41_2045
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphatase A; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).


ensembl_gene_id: XD41_2048
symbol: nfo
gene_biotype: protein_coding
description:
  Putative endonuclease 4; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.


ensembl_gene_id: XD41_2049
symbol: cobD
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: XD41_2057
symbol: queC
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.


ensembl_gene_id: XD41_2060
symbol: dksA
gene_biotype: protein_coding
description:
  RNA polymerase-binding transcription factor DksA; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.


ensembl_gene_id: XD41_2066
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: XD41_2078
symbol: hypA
gene_biotype: protein_coding
description:
  Zn finger protein HypA/HybF; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.


ensembl_gene_id: XD41_2093
symbol: XD41_2093
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein fliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: XD41_2136
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: XD41_2137
symbol: XD41_2137
gene_biotype: protein_coding
description:
  Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: XD41_2141
symbol: trmL
gene_biotype: protein_coding
description:
  tRNA (cytidine(34)-2'-O)-methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.


ensembl_gene_id: XD41_2146
symbol: XD41_2146
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: XD41_2156
symbol: panB
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: XD41_2160
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: XD41_2161
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: XD41_2162
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: XD41_2163
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: XD41_2183
symbol: dapL
gene_biotype: protein_coding
description:
  LL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate.


# pathwayInfo

id: CL:1000
description: Mixed, incl. UTP metabolic process, and Toxin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1000_Mixed,_incl._UTP_metabolic_process,_and_Toxin_metabolic_process


id: CL:1012
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1012_Mixed,_incl._Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor,_and_Flavoprotein

description:
  Mixed, incl. Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor, and Flavoprotein


id: CL:1030
description: Mixed, incl. Vitamin metabolic process, and Pyridine nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1030_Mixed,_incl._Vitamin_metabolic_process,_and_Pyridine_nucleotide_biosynthetic_process


id: CL:1031
description: Mixed, incl. Vitamin metabolic process, and Pfam phage integrase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1031_Mixed,_incl._Vitamin_metabolic_process,_and_Pfam_phage_integrase_family


id: CL:1032
description: Mixed, incl. Riboflavin metabolic process, and Folic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1032_Mixed,_incl._Riboflavin_metabolic_process,_and_Folic_acid_metabolic_process


id: CL:1034
description: Riboflavin metabolic process, and Response to heat
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1034_Riboflavin_metabolic_process,_and_Response_to_heat


id: CL:1063
description: Mixed, incl. Folic acid metabolic process, and Helicase/UvrB, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1063_Mixed,_incl._Folic_acid_metabolic_process,_and_Helicase/UvrB,_N-terminal


id: CL:1084
description: Biotin biosynthesis, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1084_Biotin_biosynthesis,_and_Methyltransferase_domain


id: CL:1102
description: Mixed, incl. Pyridine-containing compound biosynthetic process, and NUDIX hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1102_Mixed,_incl._Pyridine-containing_compound_biosynthetic_process,_and_NUDIX_hydrolase


id: CL:1104
description: Pyridine-containing compound biosynthetic process, and NUDIX hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1104_Pyridine-containing_compound_biosynthetic_process,_and_NUDIX_hydrolase


id: CL:1106
description: Pyridine nucleotide biosynthetic process, and NUDIX hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1106_Pyridine_nucleotide_biosynthetic_process,_and_NUDIX_hydrolase


id: CL:1109
description: Nicotinamide nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1109_Nicotinamide_nucleotide_biosynthetic_process


id: CL:1132
description: Mixed, incl. Vitamin B6 metabolic process, and Cytidylyltransferase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1132_Mixed,_incl._Vitamin_B6_metabolic_process,_and_Cytidylyltransferase-like


id: CL:1147
description: Mixed, incl. YcaO-like domain, and Lysine methyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1147_Mixed,_incl._YcaO-like_domain,_and_Lysine_methyltransferase


id: CL:1159
description: Mixed, incl. Iron-sulfur cluster assembly, and tRNA threonylcarbamoyladenosine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1159_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_tRNA_threonylcarbamoyladenosine_modification


id: CL:1161
description: Mixed, incl. Iron-sulfur cluster assembly, and Cysteine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1161_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Cysteine_biosynthetic_process


id: CL:1163
description: Mixed, incl. Cysteine biosynthetic process, and tRNA synthetases class I, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1163_Mixed,_incl._Cysteine_biosynthetic_process,_and_tRNA_synthetases_class_I,_catalytic_domain


id: CL:1191
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and Alanine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1191_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_Alanine_metabolic_process


id: CL:1193
description: Mixed, incl. Carbohydrate kinase, and RuvB-like P-loop domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1193_Mixed,_incl._Carbohydrate_kinase,_and_RuvB-like_P-loop_domain


id: CL:1208
description: tRNA threonylcarbamoyladenosine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1208_tRNA_threonylcarbamoyladenosine_modification


id: CL:1223
description: Mixed, incl. 5-3 exonuclease activity, and Exoribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1223_Mixed,_incl._5-3_exonuclease_activity,_and_Exoribonuclease_activity


id: CL:1237
description: Mixed, incl. Antioxidant activity, and rRNA processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1237_Mixed,_incl._Antioxidant_activity,_and_rRNA_processing


id: CL:1239
description: Antioxidant activity, and Rubrerythrin
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1239_Antioxidant_activity,_and_Rubrerythrin


id: CL:1256
description: Mixed, incl. Aminoglycan metabolic process, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1256_Mixed,_incl._Aminoglycan_metabolic_process,_and_Cell_division


id: CL:1258
description: Mixed, incl. Aminoglycan metabolic process, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1258_Mixed,_incl._Aminoglycan_metabolic_process,_and_Cell_division_site


id: CL:1259
description: Mixed, incl. Aminoglycan metabolic process, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1259_Mixed,_incl._Aminoglycan_metabolic_process,_and_Cell_division_site


id: CL:1260
description: Regulation of cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1260_Regulation_of_cell_shape,_and_Cell_division_site


id: CL:1261
description: Cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1261_Cell_shape,_and_Cell_division_site


id: CL:1264
description: Cell cycle, and rRNA (cytosine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1264_Cell_cycle,_and_rRNA_(cytosine)_methyltransferase_activity


id: CL:1269
description: Mur ligase, central, and Glycosyl transferase family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1269_Mur_ligase,_central,_and_Glycosyl_transferase_family_4


id: CL:129
description: Small ribosomal subunit, and Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:129_Small_ribosomal_subunit,_and_Structural_constituent_of_ribosome


id: CL:1301
description: Mixed, incl. MreB/Mbl protein, and Cell cycle protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1301_Mixed,_incl._MreB/Mbl_protein,_and_Cell_cycle_protein


id: CL:131
description: Small ribosomal subunit, and rRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:131_Small_ribosomal_subunit,_and_rRNA-binding


id: CL:1316
description: Peptidoglycan muralytic activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1316_Peptidoglycan_muralytic_activity


id: CL:1327
description: D-alanine-D-alanine ligase activity, and Lysine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1327_D-alanine-D-alanine_ligase_activity,_and_Lysine_catabolic_process


id: CL:1347
description: Import into cell, and K homology domain-like, alpha/beta
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1347_Import_into_cell,_and_K_homology_domain-like,_alpha/beta


id: CL:1349
description: Import into cell, and Ribosomal small subunit binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1349_Import_into_cell,_and_Ribosomal_small_subunit_binding


id: CL:1363
description: Phosphotransferase system, and K homology domain-like, alpha/beta
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1363_Phosphotransferase_system,_and_K_homology_domain-like,_alpha/beta


id: CL:1374
description: Mixed, incl. Polyamine metabolic process, and Intramolecular oxidoreductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1374_Mixed,_incl._Polyamine_metabolic_process,_and_Intramolecular_oxidoreductase_activity


id: CL:1375
description: Mixed, incl. Polyamine metabolic process, and SPOR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1375_Mixed,_incl._Polyamine_metabolic_process,_and_SPOR_domain


id: CL:1377
description: Polyamine biosynthesis, and Amino acid salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1377_Polyamine_biosynthesis,_and_Amino_acid_salvage


id: CL:1396
description: Mixed, incl. Response to UV, and Allosteric enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1396_Mixed,_incl._Response_to_UV,_and_Allosteric_enzyme


id: CL:1409
description: Mixed, incl. Smr domain, and Met-10+ like-protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1409_Mixed,_incl._Smr_domain,_and_Met-10+_like-protein


id: CL:1419
description: Cytochrome complex assembly, and Bacterial nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1419_Cytochrome_complex_assembly,_and_Bacterial_nucleoid


id: CL:1421
description: Heme transport, and Sodium ion transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1421_Heme_transport,_and_Sodium_ion_transmembrane_transport


id: CL:1445
description: Mixed, incl. Oxidoreductase activity, acting on a sulfur group of donors, and Cation transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1445_Mixed,_incl._Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_and_Cation_transport


id: CL:1446
description: Mixed, incl. Oxidoreductase activity, acting on a sulfur group of donors, and Cation transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1446_Mixed,_incl._Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_and_Cation_transport


id: CL:1447
description: Mixed, incl. Oxidoreductase activity, acting on a sulfur group of donors, and Thioredoxin-like fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1447_Mixed,_incl._Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_and_Thioredoxin-like_fold


id: CL:1448
description: Oxidoreductase activity, acting on a sulfur group of donors, and Thioredoxin-like fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1448_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_and_Thioredoxin-like_fold


id: CL:1462
description: Mixed, incl. Thioredoxin-like fold, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1462_Mixed,_incl._Thioredoxin-like_fold,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:1474
description: Mixed, incl. P-type ATPase, subfamily IB, and Metal ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1474_Mixed,_incl._P-type_ATPase,_subfamily_IB,_and_Metal_ion_transport


id: CL:1475
description: Mixed, incl. P-type ATPase, subfamily IB, and Heavy-metal-associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1475_Mixed,_incl._P-type_ATPase,_subfamily_IB,_and_Heavy-metal-associated_domain


id: CL:1486
description: Mixed, incl. MarR-type HTH domain, and Monooxygenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1486_Mixed,_incl._MarR-type_HTH_domain,_and_Monooxygenase_activity


id: CL:1499
description: Cell redox homeostasis, and Ubiquinone biosynthesis complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1499_Cell_redox_homeostasis,_and_Ubiquinone_biosynthesis_complex


id: CL:151
description: Small ribosomal subunit, and Translation elongation factor EF1B/ribosomal protein S6
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:151_Small_ribosomal_subunit,_and_Translation_elongation_factor_EF1B/ribosomal_protein_S6


id: CL:1510
description: Mixed, incl. Queuosine metabolic process, and AMP-dependent ligase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1510_Mixed,_incl._Queuosine_metabolic_process,_and_AMP-dependent_ligase,_C-terminal


id: CL:1527
description: Radical SAM superfamily, and Porphyrin-containing compound biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1527_Radical_SAM_superfamily,_and_Porphyrin-containing_compound_biosynthetic_process


id: CL:1541
description: Mixed, incl. DNA-binding HTH domain, TetR-type, and TGS-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1541_Mixed,_incl._DNA-binding_HTH_domain,_TetR-type,_and_TGS-like


id: CL:1543
description: Mixed, incl. TGS-like, and SpoU rRNA Methylase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1543_Mixed,_incl._TGS-like,_and_SpoU_rRNA_Methylase_family


id: CL:1564
description: Mixed, incl. HDIG domain, and Nicotinate and nicotinamide metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1564_Mixed,_incl._HDIG_domain,_and_Nicotinate_and_nicotinamide_metabolism


id: CL:1579
description: Mixed, incl. Carbohydrate metabolic process, and Nucleotide-sugar metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1579_Mixed,_incl._Carbohydrate_metabolic_process,_and_Nucleotide-sugar_metabolic_process


id: CL:1580
description: Mixed, incl. Polysaccharide metabolic process, and Amino sugar and nucleotide sugar metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1580_Mixed,_incl._Polysaccharide_metabolic_process,_and_Amino_sugar_and_nucleotide_sugar_metabolism


id: CL:1581
description: Mixed, incl. Polysaccharide metabolic process, and Amino sugar and nucleotide sugar metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1581_Mixed,_incl._Polysaccharide_metabolic_process,_and_Amino_sugar_and_nucleotide_sugar_metabolism


id: CL:1582
description: Mixed, incl. Polysaccharide metabolic process, and Nucleotide-sugar metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1582_Mixed,_incl._Polysaccharide_metabolic_process,_and_Nucleotide-sugar_metabolic_process


id: CL:1583
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferase, family 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1583_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyl_transferase,_family_1


id: CL:1584
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferase, family 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1584_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyl_transferase,_family_1


id: CL:1586
description: O-Antigen nucleotide sugar biosynthesis, and Starch and sucrose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1586_O-Antigen_nucleotide_sugar_biosynthesis,_and_Starch_and_sucrose_metabolism


id: CL:1587
description: O-Antigen nucleotide sugar biosynthesis, and Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1587_O-Antigen_nucleotide_sugar_biosynthesis,_and_Alpha-D-phosphohexomutase,_alpha/beta/alpha_I/II/III


id: CL:1588
description: O-Antigen nucleotide sugar biosynthesis, and Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1588_O-Antigen_nucleotide_sugar_biosynthesis,_and_Alpha-D-phosphohexomutase,_alpha/beta/alpha_I/II/III


id: CL:1589
description: O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1589_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:1591
description: Polyketide sugar unit biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1591_Polyketide_sugar_unit_biosynthesis


id: CL:1611
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1611_Alpha-D-phosphohexomutase,_alpha/beta/alpha_I/II/III,_and_Mannose-6-phosphate_isomerase,_type_II,_C-terminal

description:
  Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III, and Mannose-6-phosphate isomerase, type II, C-terminal


id: CL:1625
description: Mixed, incl. Glycosyl transferase family 4, and Amino sugar metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1625_Mixed,_incl._Glycosyl_transferase_family_4,_and_Amino_sugar_metabolic_process


id: CL:1635
description: Glucan metabolic process, and Glycosyltransferase subfamily 4-like, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1635_Glucan_metabolic_process,_and_Glycosyltransferase_subfamily_4-like,_N-terminal_domain


id: CL:1637
description: Glucan metabolic process, and Alpha-glucan phosphorylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1637_Glucan_metabolic_process,_and_Alpha-glucan_phosphorylase


id: CL:1664
description: Glycosyl transferases group 1, and Glycoside hydrolase/deacetylase, beta/alpha-barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1664_Glycosyl_transferases_group_1,_and_Glycoside_hydrolase/deacetylase,_beta/alpha-barrel


id: CL:1677
description: Mixed, incl. UDP-glucose 6-dehydrogenase, bacterial type, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1677_Mixed,_incl._UDP-glucose_6-dehydrogenase,_bacterial_type,_and_Glycosyl_transferase_family_2


id: CL:1686
description: Mixed, incl. Polysaccharide transport, and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1686_Mixed,_incl._Polysaccharide_transport,_and_ABC-2_transporter


id: CL:1688
description: Polysaccharide transport, and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1688_Polysaccharide_transport,_and_ABC-2_transporter


id: CL:1698
description: Mixed, incl. Methyltransferase domain, and Glycosyltransferase like family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1698_Mixed,_incl._Methyltransferase_domain,_and_Glycosyltransferase_like_family_2


id: CL:1707
description: Mixed, incl. Glycosyltransferase 2-like, and Methyltransferase FkbM
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1707_Mixed,_incl._Glycosyltransferase_2-like,_and_Methyltransferase_FkbM


id: CL:1708
description: Mixed, incl. Methyltransferase FkbM, and 6-hydroxymethylpterin diphosphokinase MptE-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1708_Mixed,_incl._Methyltransferase_FkbM,_and_6-hydroxymethylpterin_diphosphokinase_MptE-like


id: CL:1711
description: 6-hydroxymethylpterin diphosphokinase MptE-like, and GmhA/DiaA
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1711_6-hydroxymethylpterin_diphosphokinase_MptE-like,_and_GmhA/DiaA


id: CL:1724
description: Mixed, incl. Methyltransferase FkbM, and Ribosomal protein S12 methylthiotransferase RimO
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1724_Mixed,_incl._Methyltransferase_FkbM,_and_Ribosomal_protein_S12_methylthiotransferase_RimO


id: CL:1733
description: Mixed, incl. rRNA (adenine-N6,N6-)-dimethyltransferase activity, and Protein O-linked glycosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1733_Mixed,_incl._rRNA_(adenine-N6,N6-)-dimethyltransferase_activity,_and_Protein_O-linked_glycosylation


id: CL:1744
description: Mostly uncharacterized, incl. Peptidase M20, and Regulation of transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1744_Mostly_uncharacterized,_incl._Peptidase_M20,_and_Regulation_of_transport


id: CL:1746
description: Mixed, incl. Peptidase M20, and 5-nucleotidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1746_Mixed,_incl._Peptidase_M20,_and_5-nucleotidase_activity


id: CL:1756
description: Mixed, incl. DNA integration, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1756_Mixed,_incl._DNA_integration,_and_Transposase_activity


id: CL:1765
description: Mixed, incl. Lipopolysaccharide biosynthesis, and Membrane organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1765_Mixed,_incl._Lipopolysaccharide_biosynthesis,_and_Membrane_organization


id: CL:1766
description: Lipopolysaccharide biosynthesis, and Membrane organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1766_Lipopolysaccharide_biosynthesis,_and_Membrane_organization


id: CL:1767
description: Mixed, incl. Glycolipid metabolic process, and Membrane organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1767_Mixed,_incl._Glycolipid_metabolic_process,_and_Membrane_organization


id: CL:1768
description: Glycolipid metabolic process, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1768_Glycolipid_metabolic_process,_and_Lipopolysaccharide_biosynthesis


id: CL:1770
description: Lipopolysaccharide biosynthesis, and Lipid A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1770_Lipopolysaccharide_biosynthesis,_and_Lipid_A_biosynthesis


id: CL:1786
description: Lipid A biosynthesis, and Protein insertion into membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1786_Lipid_A_biosynthesis,_and_Protein_insertion_into_membrane


id: CL:180
description: Mixed, incl. L28p-like, and Large ribosomal subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:180_Mixed,_incl._L28p-like,_and_Large_ribosomal_subunit


id: CL:1800
description: Permease LptG/LptF-related, and Lipopolysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1800_Permease_LptG/LptF-related,_and_Lipopolysaccharide_transport


id: CL:1810
description: Glycosyl transferase, family 9, and Carbohydrate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1810_Glycosyl_transferase,_family_9,_and_Carbohydrate_metabolism


id: CL:1813
description: Carbohydrate metabolism, and Ribokinase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1813_Carbohydrate_metabolism,_and_Ribokinase-like


id: CL:1829
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1829_Mixed,_incl._Porin_activity,_and_Phosphotransferase_activity,_for_other_substituted_phosphate_groups

description:
  Mixed, incl. Porin activity, and Phosphotransferase activity, for other substituted phosphate groups


id: CL:1831
description: Mixed, incl. CDP-glycerol glycerophosphotransferase, and Pilin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1831_Mixed,_incl._CDP-glycerol_glycerophosphotransferase,_and_Pilin-like


id: CL:1833
description: Mixed, incl. UbiA prenyltransferase family, and Pilin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1833_Mixed,_incl._UbiA_prenyltransferase_family,_and_Pilin-like


id: CL:1847
description: CDP-glycerol glycerophosphotransferase, and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1847_CDP-glycerol_glycerophosphotransferase,_and_ABC-2_transporter


id: CL:1857
description: Mixed, incl. Porin activity, and Protein import
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1857_Mixed,_incl._Porin_activity,_and_Protein_import


id: CL:1861
description: Mixed, incl. Protein import, and TonB/TolA, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1861_Mixed,_incl._Protein_import,_and_TonB/TolA,_C-terminal


id: CL:1876
description: Mixed, incl. ParB/Sulfiredoxin superfamily, and Mannosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1876_Mixed,_incl._ParB/Sulfiredoxin_superfamily,_and_Mannosylation


id: CL:1878
description: Mixed, incl. Mannosylation, and Metalloenzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1878_Mixed,_incl._Mannosylation,_and_Metalloenzyme


id: CL:1890
description: ParB/Sulfiredoxin superfamily, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1890_ParB/Sulfiredoxin_superfamily,_and_AAA_domain


id: CL:1899
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1899_Mixed,_incl._Generation_of_precursor_metabolites_and_energy,_and_4Fe-4S_ferredoxin-type,_iron-sulphur_binding_domain

description:
  Mixed, incl. Generation of precursor metabolites and energy, and 4Fe-4S ferredoxin-type, iron-sulphur binding domain


id: CL:1900
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1900_Mixed,_incl._Generation_of_precursor_metabolites_and_energy,_and_4Fe-4S_ferredoxin-type,_iron-sulphur_binding_domain

description:
  Mixed, incl. Generation of precursor metabolites and energy, and 4Fe-4S ferredoxin-type, iron-sulphur binding domain


id: CL:1901
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1901_Mixed,_incl._Generation_of_precursor_metabolites_and_energy,_and_4Fe-4S_ferredoxin,_iron-sulphur_binding,_conserved_site

description:
  Mixed, incl. Generation of precursor metabolites and energy, and 4Fe-4S ferredoxin, iron-sulphur binding, conserved site


id: CL:1902
description: Mixed, incl. Cellular respiration, and 4Fe-4S ferredoxin, iron-sulphur binding, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1902_Mixed,_incl._Cellular_respiration,_and_4Fe-4S_ferredoxin,_iron-sulphur_binding,_conserved_site


id: CL:1903
description: Mixed, incl. Cellular respiration, and 4Fe-4S ferredoxin, iron-sulphur binding, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1903_Mixed,_incl._Cellular_respiration,_and_4Fe-4S_ferredoxin,_iron-sulphur_binding,_conserved_site


id: CL:1904
description: Cellular respiration, and Quinone binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1904_Cellular_respiration,_and_Quinone_binding


id: CL:1905
description: Mixed, incl. Anaerobic respiration, and Electron transfer activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1905_Mixed,_incl._Anaerobic_respiration,_and_Electron_transfer_activity


id: CL:1907
description: Mixed, incl. Anaerobic respiration, and Formate dehydrogenase (NAD+) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1907_Mixed,_incl._Anaerobic_respiration,_and_Formate_dehydrogenase_(NAD+)_activity


id: CL:1908
description: Molybdopterin cofactor binding, and Anaerobic respiration
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1908_Molybdopterin_cofactor_binding,_and_Anaerobic_respiration


id: CL:1910
description: Mixed, incl. Molybdopterin oxidoreductase, and NrfD family
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1910_Mixed,_incl._Molybdopterin_oxidoreductase,_and_NrfD_family


id: CL:1931
description: Mixed, incl. Respirasome, and 2Fe-2S ferredoxin-type iron-sulfur binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1931_Mixed,_incl._Respirasome,_and_2Fe-2S_ferredoxin-type_iron-sulfur_binding_domain


id: CL:1947
description: Mixed, incl. Cytochrome c-552/4, and Nitrite/sulphite reductase 4Fe-4S domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1947_Mixed,_incl._Cytochrome_c-552/4,_and_Nitrite/sulphite_reductase_4Fe-4S_domain


id: CL:1956
description: Oxidoreductase activity, acting on NAD(P)H, and Sulphur transport domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1956_Oxidoreductase_activity,_acting_on_NAD(P)H,_and_Sulphur_transport_domain


id: CL:1957
description: Oxidoreductase activity, acting on NAD(P)H
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1957_Oxidoreductase_activity,_acting_on_NAD(P)H


id: CL:1961
description: Quinone, and Soluble ligand binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1961_Quinone,_and_Soluble_ligand_binding_domain


id: CL:1983
description: NADH dehydrogenase (ubiquinone) activity, and NADH dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1983_NADH_dehydrogenase_(ubiquinone)_activity,_and_NADH_dehydrogenase


id: CL:1996
description: Sulphur transport domain, and Cytochrome complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:1996_Sulphur_transport_domain,_and_Cytochrome_complex


id: CL:2006
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2006_Mixed,_incl._Oxidoreductase_activity,_acting_on_hydrogen_as_donor,_and_H(2):CoB-CoM_heterodisulfide,ferredoxin_reductase_subunit_A-like

description:
  Mixed, incl. Oxidoreductase activity, acting on hydrogen as donor, and H(2):CoB-CoM heterodisulfide,ferredoxin reductase subunit A-like


id: CL:2007
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2007_Mixed,_incl._Oxidoreductase_activity,_acting_on_hydrogen_as_donor,_and_H(2):CoB-CoM_heterodisulfide,ferredoxin_reductase_subunit_A-like

description:
  Mixed, incl. Oxidoreductase activity, acting on hydrogen as donor, and H(2):CoB-CoM heterodisulfide,ferredoxin reductase subunit A-like


id: CL:2009
description: H(2):CoB-CoM heterodisulfide,ferredoxin reductase subunit A-like, and NADH metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2009_H(2):CoB-CoM_heterodisulfide,ferredoxin_reductase_subunit_A-like,_and_NADH_metabolic_process


id: CL:2011
description: NADH metabolic process, and Lactate oxidation
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2011_NADH_metabolic_process,_and_Lactate_oxidation


id: CL:2041
description: 3Fe-4S, and Nickel-dependent hydrogenase, large subunit, nickel binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2041_3Fe-4S,_and_Nickel-dependent_hydrogenase,_large_subunit,_nickel_binding_site


id: CL:2051
description: ATPase complex, and Protein maturation
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2051_ATPase_complex,_and_Protein_maturation


id: CL:2063
description: Glycolate oxidase complex, and Cysteine-rich domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2063_Glycolate_oxidase_complex,_and_Cysteine-rich_domain


id: CL:2079
description: Mixed, incl. Sulfur metabolism, and Peptidase S1C
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2079_Mixed,_incl._Sulfur_metabolism,_and_Peptidase_S1C


id: CL:2080
description: Mostly uncharacterized, incl. Nitrite and sulphite reductase 4Fe-4S domain, and NrfD family
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2080_Mostly_uncharacterized,_incl._Nitrite_and_sulphite_reductase_4Fe-4S_domain,_and_NrfD_family


id: CL:2082
description: Mixed, incl. Nitrite and sulphite reductase 4Fe-4S domain, and NrfD family
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2082_Mixed,_incl._Nitrite_and_sulphite_reductase_4Fe-4S_domain,_and_NrfD_family


id: CL:2084
description: Mixed, incl. NrfD family, and Amine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2084_Mixed,_incl._NrfD_family,_and_Amine_catabolic_process


id: CL:2094
description: Nitrite and sulphite reductase 4Fe-4S domain, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2094_Nitrite_and_sulphite_reductase_4Fe-4S_domain,_and_4Fe-4S_binding_domain


id: CL:2113
description: Hydrogen sulfide metabolic process, and Protein tetramerization
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2113_Hydrogen_sulfide_metabolic_process,_and_Protein_tetramerization


id: CL:2128
description: Mixed, incl. DRTGG domain, and Protein acylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2128_Mixed,_incl._DRTGG_domain,_and_Protein_acylation


id: CL:2145
description: Mixed, incl. Electron transport, and Cellular detoxification
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2145_Mixed,_incl._Electron_transport,_and_Cellular_detoxification


id: CL:2147
description: Rubredoxin-like domain, and Flavodoxin/nitric oxide synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2147_Rubredoxin-like_domain,_and_Flavodoxin/nitric_oxide_synthase


id: CL:2175
description: Mixed, incl. AMP-dependent ligase, C-terminal, and FAD binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2175_Mixed,_incl._AMP-dependent_ligase,_C-terminal,_and_FAD_binding_domain


id: CL:2178
description: Mixed, incl. RlpA-like domain superfamily, and Transcription regulator complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2178_Mixed,_incl._RlpA-like_domain_superfamily,_and_Transcription_regulator_complex


id: CL:2200
description: Mixed, incl. Protein lipoylation, and Tricarboxylic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2200_Mixed,_incl._Protein_lipoylation,_and_Tricarboxylic_acid_metabolic_process


id: CL:2202
description: Protein lipoylation, and Organelle lumen
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2202_Protein_lipoylation,_and_Organelle_lumen


id: CL:2229
description: Mixed, incl. Signaling, and Flagellar assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2229_Mixed,_incl._Signaling,_and_Flagellar_assembly


id: CL:2231
description: Signaling, and Flagellar assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2231_Signaling,_and_Flagellar_assembly


id: CL:2232
description: Signaling, and Flagellar assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2232_Signaling,_and_Flagellar_assembly


id: CL:2233
description: Signaling, and Flagellar assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2233_Signaling,_and_Flagellar_assembly


id: CL:2235
description: Signaling, and Flagellar assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2235_Signaling,_and_Flagellar_assembly


id: CL:2237
description: Signaling, and Flagellar assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2237_Signaling,_and_Flagellar_assembly


id: CL:2239
description: Signaling, and Flagellar assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2239_Signaling,_and_Flagellar_assembly


id: CL:2240
description: Signaling, and Diguanylate cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2240_Signaling,_and_Diguanylate_cyclase_activity


id: CL:2242
description: Signaling, and Diguanylate cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2242_Signaling,_and_Diguanylate_cyclase_activity


id: CL:2243
description: Signaling, and Diguanylate cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2243_Signaling,_and_Diguanylate_cyclase_activity


id: CL:2254
description: His Kinase A (phosphoacceptor) domain, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2254_His_Kinase_A_(phosphoacceptor)_domain,_and_Diguanylate_cyclase


id: CL:2257
description: PAS domain superfamily, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2257_PAS_domain_superfamily,_and_Diguanylate_cyclase


id: CL:2260
description: PAS domain superfamily, and PPM-type phosphatase-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2260_PAS_domain_superfamily,_and_PPM-type_phosphatase-like_domain


id: CL:2264
description: Mixed, incl. PAC motif, and PPM-type phosphatase-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2264_Mixed,_incl._PAC_motif,_and_PPM-type_phosphatase-like_domain


id: CL:2304
description: Mixed, incl. CheW-like domain, and Demethylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2304_Mixed,_incl._CheW-like_domain,_and_Demethylation


id: CL:2305
description: Mixed, incl. Two component signalling adaptor domain, and Demethylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2305_Mixed,_incl._Two_component_signalling_adaptor_domain,_and_Demethylation


id: CL:2319
description: CheW-like domain, and Demethylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2319_CheW-like_domain,_and_Demethylation


id: CL:2352
description: Mixed, incl. HD domain, and Major facilitator superfamily domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2352_Mixed,_incl._HD_domain,_and_Major_facilitator_superfamily_domain


id: CL:2363
description: HD-GYP domain, and Tll0287-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2363_HD-GYP_domain,_and_Tll0287-like


id: CL:2376
description: Mixed, incl. Sequence-specific DNA binding, and Double Cache domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2376_Mixed,_incl._Sequence-specific_DNA_binding,_and_Double_Cache_domain_1


id: CL:2378
description: Double Cache domain 1, and Sequence-specific DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2378_Double_Cache_domain_1,_and_Sequence-specific_DNA_binding


id: CL:2403
description: Mixed, incl. alanyl-tRNA aminoacylation, and Tetratricopeptide repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2403_Mixed,_incl._alanyl-tRNA_aminoacylation,_and_Tetratricopeptide_repeats


id: CL:2421
description: Flagellar assembly, and Bacterial-type flagellum organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2421_Flagellar_assembly,_and_Bacterial-type_flagellum_organization


id: CL:2426
description: Cilium, and Flagellar basal body rod protein, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2426_Cilium,_and_Flagellar_basal_body_rod_protein,_conserved_site


id: CL:2431
description: Bacterial-type flagellum basal body, and Bacterial flagellum biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2431_Bacterial-type_flagellum_basal_body,_and_Bacterial_flagellum_biogenesis


id: CL:2432
description: Bacterial-type flagellum basal body
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2432_Bacterial-type_flagellum_basal_body


id: CL:2436
description: Bacterial-type flagellum basal body, distal rod, and Flagellar hook-basal body protein, FlgE/F/G
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2436_Bacterial-type_flagellum_basal_body,_distal_rod,_and_Flagellar_hook-basal_body_protein,_FlgE/F/G


id: CL:245
description: Protein targeting, and Translocation
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:245_Protein_targeting,_and_Translocation


id: CL:2456
description: SpoA-like superfamily, and Flagellar rotation
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2456_SpoA-like_superfamily,_and_Flagellar_rotation


id: CL:2465
description: Bacterial flagellum protein export, and FlhB HrpN YscU SpaS Family
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2465_Bacterial_flagellum_protein_export,_and_FlhB_HrpN_YscU_SpaS_Family


id: CL:2474
description: Mixed, incl. Flagellar rotation, and MgtE, N-terminal domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2474_Mixed,_incl._Flagellar_rotation,_and_MgtE,_N-terminal_domain_superfamily


id: CL:2487
description: Flagellin, C-terminal domain, and Bacterial-type flagellum hook
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2487_Flagellin,_C-terminal_domain,_and_Bacterial-type_flagellum_hook


id: CL:2520
description: Mixed, incl. STAS domain, and D-amino acid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2520_Mixed,_incl._STAS_domain,_and_D-amino_acid_catabolic_process


id: CL:2521
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2521_Mixed,_incl._MotA/TolQ/ExbB_proton_channel_family,_and_DUF_based_on_E._rectale_Gene_description_(DUF3880)

description:
  Mixed, incl. MotA/TolQ/ExbB proton channel family, and DUF based on E. rectale Gene description (DUF3880)


id: CL:2530
description: Mixed, incl. STAS domain, and D-amino acid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2530_Mixed,_incl._STAS_domain,_and_D-amino_acid_catabolic_process


id: CL:2561
description: Mixed, incl. Regulation of locomotion, and Cell division coordinator CpoB
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2561_Mixed,_incl._Regulation_of_locomotion,_and_Cell_division_coordinator_CpoB


id: CL:257
description: Protein transport by the Sec complex, and Establishment of protein localization to membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:257_Protein_transport_by_the_Sec_complex,_and_Establishment_of_protein_localization_to_membrane


id: CL:2574
description: Mixed, incl. Two-component regulatory system, and Sigma-54 interaction domain, ATP-binding site 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2574_Mixed,_incl._Two-component_regulatory_system,_and_Sigma-54_interaction_domain,_ATP-binding_site_2


id: CL:2583
description: Mixed, incl. Lipid A metabolic process, and Acid phosphatase homologues
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2583_Mixed,_incl._Lipid_A_metabolic_process,_and_Acid_phosphatase_homologues


id: CL:2585
description: Mixed, incl. DUS-like, FMN-binding domain, and lipid-A-disaccharide synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2585_Mixed,_incl._DUS-like,_FMN-binding_domain,_and_lipid-A-disaccharide_synthase_activity


id: CL:2607
description: Mixed, incl. Vacuole, and Lipid degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2607_Mixed,_incl._Vacuole,_and_Lipid_degradation


id: CL:2608
description: Mixed, incl. KaiC domain, and Lipid degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2608_Mixed,_incl._KaiC_domain,_and_Lipid_degradation


id: CL:2619
description: DnaB-like helicase C terminal domain, and PilZ domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2619_DnaB-like_helicase_C_terminal_domain,_and_PilZ_domain


id: CL:2629
description: Mixed, incl. Transmembrane protein TauE-like, and Sequence-specific DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2629_Mixed,_incl._Transmembrane_protein_TauE-like,_and_Sequence-specific_DNA_binding


id: CL:2630
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2630_Mixed,_incl._Transmembrane_protein_TauE-like,_and_Putative_regulatory_protein,_FmdB,_Zinc_ribbon_domain

description:
  Mixed, incl. Transmembrane protein TauE-like, and Putative regulatory protein, FmdB, Zinc ribbon domain


id: CL:2631
description: Mixed, incl. Putative regulatory protein, FmdB, Zinc ribbon domain, and Photosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2631_Mixed,_incl._Putative_regulatory_protein,_FmdB,_Zinc_ribbon_domain,_and_Photosynthesis


id: CL:2632
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2632_Mixed,_incl._Putative_regulatory_protein,_FmdB,_Zinc_ribbon_domain,_and_Putative_zinc-_or_iron-chelating_domain

description:
  Mixed, incl. Putative regulatory protein, FmdB, Zinc ribbon domain, and Putative zinc- or iron-chelating domain


id: CL:2644
description: Mixed, incl. Arsenical pump membrane protein, ArsB, and Trimeric LpxA-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2644_Mixed,_incl._Arsenical_pump_membrane_protein,_ArsB,_and_Trimeric_LpxA-like_superfamily


id: CL:2655
description: Mixed, incl. Phosphoenolpyruvate synthase, and Transcriptional regulatory protein WalR-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2655_Mixed,_incl._Phosphoenolpyruvate_synthase,_and_Transcriptional_regulatory_protein_WalR-like


id: CL:2667
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2667_Mixed,_incl._Coenzyme_PQQ_synthesis_protein_E-like,_and_Siroheme_decarboxylase_,_AsnC-like_ligand_binding_domain

description:
  Mixed, incl. Coenzyme PQQ synthesis protein E-like, and Siroheme decarboxylase , AsnC-like ligand binding domain


id: CL:2669
description: Mixed, incl. PAS fold-4, and Phosphoenolpyruvate synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2669_Mixed,_incl._PAS_fold-4,_and_Phosphoenolpyruvate_synthase


id: CL:268
description: Mixed, incl. Ribosomal small subunit biogenesis, and tRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:268_Mixed,_incl._Ribosomal_small_subunit_biogenesis,_and_tRNA_pseudouridine_synthesis


id: CL:2700
description: Mostly uncharacterized, incl. Tetratricopeptide repeat, and Lipoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2700_Mostly_uncharacterized,_incl._Tetratricopeptide_repeat,_and_Lipoprotein


id: CL:2702
description: Mostly uncharacterized, incl. Tetratricopeptide repeat, and DNA recombination
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2702_Mostly_uncharacterized,_incl._Tetratricopeptide_repeat,_and_DNA_recombination


id: CL:2703
description: Mostly uncharacterized, incl. Zinc finger/thioredoxin putative, and Double-stranded DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2703_Mostly_uncharacterized,_incl._Zinc_finger/thioredoxin_putative,_and_Double-stranded_DNA_binding


id: CL:2705
description: Mostly uncharacterized, incl. Zinc finger/thioredoxin putative, and Double-stranded DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2705_Mostly_uncharacterized,_incl._Zinc_finger/thioredoxin_putative,_and_Double-stranded_DNA_binding


id: CL:2707
description: Mostly uncharacterized, incl. Double-stranded DNA binding, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2707_Mostly_uncharacterized,_incl._Double-stranded_DNA_binding,_and_Periplasmic_binding_protein


id: CL:2709
description: Mixed, incl. Double-stranded DNA binding, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2709_Mixed,_incl._Double-stranded_DNA_binding,_and_Periplasmic_binding_protein


id: CL:2712
description: Mixed, incl. Pyruvate, water dikinase activity, and GAF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2712_Mixed,_incl._Pyruvate,_water_dikinase_activity,_and_GAF_domain


id: CL:2735
description: Mixed, incl. Protein glycosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2735_Mixed,_incl._Protein_glycosylation


id: CL:2759
description: Mixed, incl. HIT-like domain, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2759_Mixed,_incl._HIT-like_domain,_and_Tetratricopeptide_repeat


id: CL:2768
description: Mostly uncharacterized, incl. E-Z type HEAT repeats, and Domain of unknown function DUF3880
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2768_Mostly_uncharacterized,_incl._E-Z_type_HEAT_repeats,_and_Domain_of_unknown_function_DUF3880


id: CL:2770
description: Mixed, incl. Domain of unknown function DUF3880, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2770_Mixed,_incl._Domain_of_unknown_function_DUF3880,_and_Tetratricopeptide_repeat


id: CL:2774
description: Mixed, incl. Domain of unknown function DUF3880, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2774_Mixed,_incl._Domain_of_unknown_function_DUF3880,_and_Tetratricopeptide_repeat


id: CL:2776
description: Mixed, incl. Tetratricopeptide repeat, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2776_Mixed,_incl._Tetratricopeptide_repeat,_and_Tetratricopeptide_repeat


id: CL:2818
description: Mixed, incl. LysM domain, and HMGL-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2818_Mixed,_incl._LysM_domain,_and_HMGL-like


id: CL:282
description: aminoacyl-tRNA ligase activity, and glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:282_aminoacyl-tRNA_ligase_activity,_and_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: CL:2821
description: Mixed, incl. HMGL-like, and Potassium ion transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2821_Mixed,_incl._HMGL-like,_and_Potassium_ion_transmembrane_transporter_activity


id: CL:2852
description: Mixed, incl. Prosthetic group metabolic process, and Protein histidine kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2852_Mixed,_incl._Prosthetic_group_metabolic_process,_and_Protein_histidine_kinase_activity


id: CL:2853
description: Prosthetic group metabolic process, and Zinc-ribbon domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2853_Prosthetic_group_metabolic_process,_and_Zinc-ribbon_domain


id: CL:2856
description: Mixed, incl. Zinc-ribbon domain, and Transglycosylase SLT domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2856_Mixed,_incl._Zinc-ribbon_domain,_and_Transglycosylase_SLT_domain_1


id: CL:2870
description: Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2870_Prosthetic_group_metabolic_process


id: CL:2885
description: Mixed, incl. Xylose isomerase-like superfamily, and DDH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2885_Mixed,_incl._Xylose_isomerase-like_superfamily,_and_DDH_domain


id: CL:289
description: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:289_Aminoacyl-tRNA_synthetase,_class_Ia,_anticodon-binding


id: CL:2897
description: Mostly uncharacterized, incl. Outer membrane-bounded periplasmic space, and DNA modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2897_Mostly_uncharacterized,_incl._Outer_membrane-bounded_periplasmic_space,_and_DNA_modification


id: CL:2898
description: Mostly uncharacterized, incl. DNA modification, and Outer membrane-bounded periplasmic space
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2898_Mostly_uncharacterized,_incl._DNA_modification,_and_Outer_membrane-bounded_periplasmic_space


id: CL:2899
description: Mixed, incl. Outer membrane-bounded periplasmic space, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2899_Mixed,_incl._Outer_membrane-bounded_periplasmic_space,_and_Signal


id: CL:2900
description: Mixed, incl. Outer membrane-bounded periplasmic space, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2900_Mixed,_incl._Outer_membrane-bounded_periplasmic_space,_and_Signal


id: CL:2902
description: Mixed, incl. Outer membrane-bounded periplasmic space, and MarR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2902_Mixed,_incl._Outer_membrane-bounded_periplasmic_space,_and_MarR-type_HTH_domain


id: CL:2906
description: Outer membrane-bounded periplasmic space, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2906_Outer_membrane-bounded_periplasmic_space,_and_Signal


id: CL:2921
description: Mixed, incl. Cellular iron ion homeostasis, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2921_Mixed,_incl._Cellular_iron_ion_homeostasis,_and_Tetratricopeptide_repeat


id: CL:2943
description: Mixed, incl. Cytochrome c-like domain superfamily, and CutA1 divalent ion tolerance protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2943_Mixed,_incl._Cytochrome_c-like_domain_superfamily,_and_CutA1_divalent_ion_tolerance_protein


id: CL:2953
description: DNA translocase activity, and RecG, C-terminal domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2953_DNA_translocase_activity,_and_RecG,_C-terminal_domain_superfamily


id: CL:2963
description: Mixed, incl. LSM domain superfamily, and Regulation of transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2963_Mixed,_incl._LSM_domain_superfamily,_and_Regulation_of_transport


id: CL:2974
description: Mixed, incl. Phospholipid transport, and Histone-like DNA-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2974_Mixed,_incl._Phospholipid_transport,_and_Histone-like_DNA-binding_protein


id: CL:2976
description: Mostly uncharacterized, incl. RF-1 domain, and Carbon-nitrogen hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2976_Mostly_uncharacterized,_incl._RF-1_domain,_and_Carbon-nitrogen_hydrolase


id: CL:2979
description: Mixed, incl. RF-1 domain, and Carbon-nitrogen hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:2979_Mixed,_incl._RF-1_domain,_and_Carbon-nitrogen_hydrolase


id: CL:3008
description: Mixed, incl. Phospholipid transport, and STAS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3008_Mixed,_incl._Phospholipid_transport,_and_STAS_domain


id: CL:3009
description: Mixed, incl. tRNA 3-end processing, and DNA helicase, UvrD/REP type
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3009_Mixed,_incl._tRNA_3-end_processing,_and_DNA_helicase,_UvrD/REP_type


id: CL:3035
description: Mixed, incl. DEAD/DEAH box helicase domain, and Ribosomal protein S1-like RNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3035_Mixed,_incl._DEAD/DEAH_box_helicase_domain,_and_Ribosomal_protein_S1-like_RNA-binding_domain


id: CL:3046
description: Mixed, incl. Bacterial secretion system, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3046_Mixed,_incl._Bacterial_secretion_system,_and_Pilus_organization


id: CL:3048
description: Mixed, incl. Bacterial secretion system, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3048_Mixed,_incl._Bacterial_secretion_system,_and_Pilus_organization


id: CL:3049
description: Bacterial secretion system, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3049_Bacterial_secretion_system,_and_Pilus_organization


id: CL:3050
description: Bacterial secretion system, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3050_Bacterial_secretion_system,_and_Pilus_organization


id: CL:3051
description: Pilus organization, and Bacterial secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3051_Pilus_organization,_and_Bacterial_secretion_system


id: CL:3052
description: Mixed, incl. Pilus organization, and Type II secretion system (T2SS), protein E, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3052_Mixed,_incl._Pilus_organization,_and_Type_II_secretion_system_(T2SS),_protein_E,_N-terminal_domain


id: CL:3066
description: Type II/IV secretion system protein, and GspF/PilC family
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3066_Type_II/IV_secretion_system_protein,_and_GspF/PilC_family


id: CL:3078
description: Mixed, incl. NolW-like, and GspF/PilC family
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3078_Mixed,_incl._NolW-like,_and_GspF/PilC_family


id: CL:3091
description: Prokaryotic N-terminal methylation motif, and Calcium ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3091_Prokaryotic_N-terminal_methylation_motif,_and_Calcium_ion_binding


id: CL:310
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, and glutamyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:310_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity,_and_glutamyl-tRNA_aminoacylation


id: CL:3103
description: Prokaryotic N-terminal methylation site
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3103_Prokaryotic_N-terminal_methylation_site


id: CL:3116
description: Mixed, incl. Horizontal gene transfer, and Outer membrane lipoprotein BamD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3116_Mixed,_incl._Horizontal_gene_transfer,_and_Outer_membrane_lipoprotein_BamD-like


id: CL:3117
description: Mixed, incl. Outer membrane lipoprotein BamD-like, and Integrase, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3117_Mixed,_incl._Outer_membrane_lipoprotein_BamD-like,_and_Integrase,_catalytic_domain


id: CL:3119
description: Mixed, incl. DNA integration, and Tetracyclin repressor-like, C-terminal domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3119_Mixed,_incl._DNA_integration,_and_Tetracyclin_repressor-like,_C-terminal_domain_superfamily


id: CL:3131
description: Mixed, incl. Horizontal gene transfer, and Pfam phage integrase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3131_Mixed,_incl._Horizontal_gene_transfer,_and_Pfam_phage_integrase_family


id: CL:3140
description: Mixed, incl. Horizontal gene transfer, and Chromosome partition
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3140_Mixed,_incl._Horizontal_gene_transfer,_and_Chromosome_partition


id: CL:3156
description: Mixed, incl. Universal stress protein A family, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3156_Mixed,_incl._Universal_stress_protein_A_family,_and_Signal


id: CL:3170
description: Mixed, incl. Peptidase S1C, and Lipopolysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3170_Mixed,_incl._Peptidase_S1C,_and_Lipopolysaccharide_transport


id: CL:3185
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3185_Mixed,_incl._Ubiquinone_and_other_terpenoid-quinone_biosynthesis,_and_Electron_transfer_flavoprotein,_alpha/beta-subunit,_N-terminal

description:
  Mixed, incl. Ubiquinone and other terpenoid-quinone biosynthesis, and Electron transfer flavoprotein, alpha/beta-subunit, N-terminal


id: CL:3186
description: Ubiquinone and other terpenoid-quinone biosynthesis, and MatE
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3186_Ubiquinone_and_other_terpenoid-quinone_biosynthesis,_and_MatE


id: CL:3188
description: Menaquinone metabolic process, and Ubiquinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3188_Menaquinone_metabolic_process,_and_Ubiquinone_metabolic_process


id: CL:3222
description: Mixed, incl. Protein repair, and SNARE associated Golgi protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3222_Mixed,_incl._Protein_repair,_and_SNARE_associated_Golgi_protein


id: CL:3240
description: Mixed, incl. ABC transporters, and beta-Lactam resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3240_Mixed,_incl._ABC_transporters,_and_beta-Lactam_resistance


id: CL:3241
description: Mixed, incl. ABC transporters, and beta-Lactam resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3241_Mixed,_incl._ABC_transporters,_and_beta-Lactam_resistance


id: CL:3242
description: Mixed, incl. Transporter activity, and Exonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3242_Mixed,_incl._Transporter_activity,_and_Exonuclease_activity


id: CL:3244
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3244_Mixed,_incl._Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_Ligand-gated_channel_activity

description:
  Mixed, incl. Amino acid ABC transporter, permease protein, 3-TM domain, and Ligand-gated channel activity


id: CL:3245
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3245_Mixed,_incl._Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_Ligand-gated_channel_activity

description:
  Mixed, incl. Amino acid ABC transporter, permease protein, 3-TM domain, and Ligand-gated channel activity


id: CL:3247
description: Amino acid ABC transporter, permease protein, 3-TM domain, and Ligand-gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3247_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_Ligand-gated_channel_activity


id: CL:3249
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3249_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_Ionotropic_glutamate_receptor,_C-terminal

description:
  Amino acid ABC transporter, permease protein, 3-TM domain, and Ionotropic glutamate receptor, C-terminal


id: CL:327
description: Aminoacyl-tRNA synthetase, class II, and Formyl transferase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:327_Aminoacyl-tRNA_synthetase,_class_II,_and_Formyl_transferase,_N-terminal


id: CL:3277
description: Mixed, incl. E1-E2 ATPase, and Response to antibiotic
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3277_Mixed,_incl._E1-E2_ATPase,_and_Response_to_antibiotic


id: CL:3280
description: Mixed, incl. Response to antibiotic, and Calcineurin-like phosphoesterase domain, ApaH type
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3280_Mixed,_incl._Response_to_antibiotic,_and_Calcineurin-like_phosphoesterase_domain,_ApaH_type


id: CL:3296
description: Mostly uncharacterized, incl. HhH-GPD domain, and Haloacid dehalogenase-like hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3296_Mostly_uncharacterized,_incl._HhH-GPD_domain,_and_Haloacid_dehalogenase-like_hydrolase


id: CL:3298
description: Mixed, incl. Haloacid dehalogenase-like hydrolase, and Cupin 2, conserved barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3298_Mixed,_incl._Haloacid_dehalogenase-like_hydrolase,_and_Cupin_2,_conserved_barrel


id: CL:3314
description: Mixed, incl. HhH-GPD domain, and Methyltransferase small domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3314_Mixed,_incl._HhH-GPD_domain,_and_Methyltransferase_small_domain


id: CL:3324
description: Mixed, incl. beta-Lactam resistance, and Lipoprotein localization
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3324_Mixed,_incl._beta-Lactam_resistance,_and_Lipoprotein_localization


id: CL:3326
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3326_Mixed,_incl._Efflux_transmembrane_transporter_activity,_and_RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain

description:
  Mixed, incl. Efflux transmembrane transporter activity, and RND efflux pump, membrane fusion protein, barrel-sandwich domain


id: CL:3327
description: Efflux transmembrane transporter activity, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3327_Efflux_transmembrane_transporter_activity,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:3329
description: Efflux transmembrane transporter activity, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3329_Efflux_transmembrane_transporter_activity,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:3345
description: Mixed, incl. ELP3/YhcC, and Major facilitator superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3345_Mixed,_incl._ELP3/YhcC,_and_Major_facilitator_superfamily


id: CL:3355
description: Lipoprotein localization, and FtsX-like permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3355_Lipoprotein_localization,_and_FtsX-like_permease_family


id: CL:337
description: Ribonuclease II/R, and S1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:337_Ribonuclease_II/R,_and_S1_domain


id: CL:3376
description: DNA helicase activity, and Flavodoxin/nitric oxide synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3376_DNA_helicase_activity,_and_Flavodoxin/nitric_oxide_synthase


id: CL:3389
description: Mixed, incl. Polyamine transport, and MetI-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3389_Mixed,_incl._Polyamine_transport,_and_MetI-like_superfamily


id: CL:3390
description: Polyamine transport, and MetI-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3390_Polyamine_transport,_and_MetI-like_superfamily


id: CL:3392
description: Polyamine transport, and ABC-type polyamine transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3392_Polyamine_transport,_and_ABC-type_polyamine_transporter_activity


id: CL:3417
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3417_Mixed,_incl._Galactose_metabolic_process,_and_Carbohydrate_derivative_transmembrane_transporter_activity

description:
  Mixed, incl. Galactose metabolic process, and Carbohydrate derivative transmembrane transporter activity


id: CL:3427
description: Mixed, incl. Quorum sensing, and Thiamine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3427_Mixed,_incl._Quorum_sensing,_and_Thiamine_metabolic_process


id: CL:3428
description: Mixed, incl. Latent infection - Other responses of Mtb to phagocytosis, and Amide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3428_Mixed,_incl._Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis,_and_Amide_transport


id: CL:3429
description: Mixed, incl. Latent infection - Other responses of Mtb to phagocytosis, and Amide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3429_Mixed,_incl._Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis,_and_Amide_transport


id: CL:3430
description: Mixed, incl. Thiamine metabolic process, and Domain of unknown function DUF4388
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3430_Mixed,_incl._Thiamine_metabolic_process,_and_Domain_of_unknown_function_DUF4388


id: CL:3432
description: Mixed, incl. Domain of unknown function DUF4388, and Host cell cytoplasm
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3432_Mixed,_incl._Domain_of_unknown_function_DUF4388,_and_Host_cell_cytoplasm


id: CL:3434
description: Mixed, incl. Host cell cytoplasm, and Cytochrome c, class III
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3434_Mixed,_incl._Host_cell_cytoplasm,_and_Cytochrome_c,_class_III


id: CL:3454
description: Thiamine metabolic process, and Adenosine to inosine editing
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3454_Thiamine_metabolic_process,_and_Adenosine_to_inosine_editing


id: CL:346
description: Mixed, incl. NusB family, and DUS-like, FMN-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:346_Mixed,_incl._NusB_family,_and_DUS-like,_FMN-binding_domain


id: CL:3467
description: Amide transport, and Solute-binding protein family 5
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3467_Amide_transport,_and_Solute-binding_protein_family_5


id: CL:3469
description: Amide transport, and Nickel cation transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3469_Amide_transport,_and_Nickel_cation_transmembrane_transporter_activity


id: CL:3487
description: Mixed, incl. PP-loop family, and Septum digestion after cytokinesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3487_Mixed,_incl._PP-loop_family,_and_Septum_digestion_after_cytokinesis


id: CL:3497
description: Mixed, incl. Response to host, and Photosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3497_Mixed,_incl._Response_to_host,_and_Photosynthesis


id: CL:3513
description: Mixed, incl. Potassium ion transport, and Iron ion homeostasis
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3513_Mixed,_incl._Potassium_ion_transport,_and_Iron_ion_homeostasis


id: CL:3514
description: Mixed, incl. Potassium ion transport, and Iron ion homeostasis
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3514_Mixed,_incl._Potassium_ion_transport,_and_Iron_ion_homeostasis


id: CL:3515
description: Mixed, incl. Potassium ion transport, and DsrEFH-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3515_Mixed,_incl._Potassium_ion_transport,_and_DsrEFH-like


id: CL:3518
description: Potassium ion transport, and Cation/H+ exchanger
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3518_Potassium_ion_transport,_and_Cation/H+_exchanger


id: CL:3535
description: Mixed, incl. DsrEFH-like, and Ion channel
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3535_Mixed,_incl._DsrEFH-like,_and_Ion_channel


id: CL:3545
description: Mixed, incl. Iron ion homeostasis, and Carboxypeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3545_Mixed,_incl._Iron_ion_homeostasis,_and_Carboxypeptidase_activity


id: CL:355
description: Mixed, incl. Pseudouridine synthesis, and GTP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:355_Mixed,_incl._Pseudouridine_synthesis,_and_GTP_binding_domain


id: CL:356
description: Mixed, incl. RNA pseudouridylate synthase, and GTP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:356_Mixed,_incl._RNA_pseudouridylate_synthase,_and_GTP_binding_domain


id: CL:3564
description: EamA domain, and Calcineurin-like phosphoesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3564_EamA_domain,_and_Calcineurin-like_phosphoesterase


id: CL:3578
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3578_Mostly_uncharacterized,_incl._TRAP_C4-dicarboxylate_transport_system_permease_DctM_subunit,_and_Proteolysis

description:
  Mostly uncharacterized, incl. TRAP C4-dicarboxylate transport system permease DctM subunit, and Proteolysis


id: CL:3579
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3579_Mostly_uncharacterized,_incl._TRAP_C4-dicarboxylate_transport_system_permease_DctM_subunit,_and_TRAP_transporter_solute_receptor_DctP

description:
  Mostly uncharacterized, incl. TRAP C4-dicarboxylate transport system permease DctM subunit, and TRAP transporter solute receptor DctP


id: CL:358
description: Mixed, incl. Pseudouridine synthase, RluA-like, conserved site, and Septation
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:358_Mixed,_incl._Pseudouridine_synthase,_RluA-like,_conserved_site,_and_Septation


id: CL:3580
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3580_Mixed,_incl._TRAP_C4-dicarboxylate_transport_system_permease_DctM_subunit,_and_TRAP_transporter_solute_receptor_DctP

description:
  Mixed, incl. TRAP C4-dicarboxylate transport system permease DctM subunit, and TRAP transporter solute receptor DctP


id: CL:3581
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3581_Mixed,_incl._TRAP_C4-dicarboxylate_transport_system_permease_DctM_subunit,_and_TRAP_transporter_solute_receptor_DctP

description:
  Mixed, incl. TRAP C4-dicarboxylate transport system permease DctM subunit, and TRAP transporter solute receptor DctP


id: CL:3583
description: TRAP transporter solute receptor DctP, and TRAP transporter large membrane protein DctM
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3583_TRAP_transporter_solute_receptor_DctP,_and_TRAP_transporter_large_membrane_protein_DctM


id: CL:3600
description: Mixed, incl. Sodium/solute symporter, and Magnesium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3600_Mixed,_incl._Sodium/solute_symporter,_and_Magnesium_ion_transport


id: CL:3613
description: Mostly uncharacterized, incl. PurE domain, and Creatinase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3613_Mostly_uncharacterized,_incl._PurE_domain,_and_Creatinase,_N-terminal


id: CL:3615
description: Mixed, incl. PurE domain, and Monocarboxylic acid transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3615_Mixed,_incl._PurE_domain,_and_Monocarboxylic_acid_transmembrane_transporter_activity


id: CL:3625
description: Mixed, incl. Creatinase, N-terminal, and Methionine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3625_Mixed,_incl._Creatinase,_N-terminal,_and_Methionine_metabolic_process


id: CL:3634
description: Mixed, incl. Cobalamin-binding domain superfamily, and Clp protease
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3634_Mixed,_incl._Cobalamin-binding_domain_superfamily,_and_Clp_protease


id: CL:3636
description: Mixed, incl. RNA ligase activity, and Protein domain specific binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3636_Mixed,_incl._RNA_ligase_activity,_and_Protein_domain_specific_binding


id: CL:3648
description: Mixed, incl. Clp protease, and Rhomboid family
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3648_Mixed,_incl._Clp_protease,_and_Rhomboid_family


id: CL:3661
description: Mixed, incl. Tetrapyrrole biosynthetic process, and ABC transporters
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3661_Mixed,_incl._Tetrapyrrole_biosynthetic_process,_and_ABC_transporters


id: CL:3663
description: Mixed, incl. Tetrapyrrole biosynthetic process, and Transition metal ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3663_Mixed,_incl._Tetrapyrrole_biosynthetic_process,_and_Transition_metal_ion_transport


id: CL:3664
description: Mixed, incl. Tetrapyrrole biosynthetic process, and Transition metal ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3664_Mixed,_incl._Tetrapyrrole_biosynthetic_process,_and_Transition_metal_ion_transport


id: CL:3665
description: Tetrapyrrole biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3665_Tetrapyrrole_biosynthetic_process


id: CL:3672
description: Tetrapyrrole methylase, and Cobalamin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3672_Tetrapyrrole_methylase,_and_Cobalamin_metabolic_process


id: CL:3714
description: Mostly uncharacterized, incl. Transition metal ion transport, and Tll0287-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3714_Mostly_uncharacterized,_incl._Transition_metal_ion_transport,_and_Tll0287-like


id: CL:3715
description: Mixed, incl. Tll0287-like, and RNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3715_Mixed,_incl._Tll0287-like,_and_RNA_ligase_activity


id: CL:3717
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3717_Mixed,_incl._Calcineurin-like_phosphoesterase_domain,_lpxH-type,_and_Universal_stress_protein_family

description:
  Mixed, incl. Calcineurin-like phosphoesterase domain, lpxH-type, and Universal stress protein family


id: CL:3736
description: Mixed, incl. Enzyme inhibitor activity, and Protein of unknown function DUF4198
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3736_Mixed,_incl._Enzyme_inhibitor_activity,_and_Protein_of_unknown_function_DUF4198


id: CL:3747
description: Mixed, incl. Siderophore transmembrane transporter activity, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3747_Mixed,_incl._Siderophore_transmembrane_transporter_activity,_and_Periplasmic_binding_protein


id: CL:3750
description: Siderophore transmembrane transporter activity, and MotA/TolQ/ExbB proton channel family
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3750_Siderophore_transmembrane_transporter_activity,_and_MotA/TolQ/ExbB_proton_channel_family


id: CL:3763
description: Periplasmic binding protein, and ABC transporter, permease protein, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3763_Periplasmic_binding_protein,_and_ABC_transporter,_permease_protein,_BtuC-like


id: CL:377
description: Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal, and Adenosine to inosine editing
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:377_Pseudouridine_synthase_TruA/RsuA/RluB/E/F,_N-terminal,_and_Adenosine_to_inosine_editing


id: CL:3781
description: Mixed, incl. Nitroreductase, and Flavoprotein-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3781_Mixed,_incl._Nitroreductase,_and_Flavoprotein-like_superfamily


id: CL:3782
description: Mixed, incl. Flavoprotein-like superfamily, and Nitroreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3782_Mixed,_incl._Flavoprotein-like_superfamily,_and_Nitroreductase


id: CL:3784
description: Nitroreductase, and Flavoprotein-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3784_Nitroreductase,_and_Flavoprotein-like_superfamily


id: CL:3800
description: Cobalamin binding, and NADPH-dependent FMN reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3800_Cobalamin_binding,_and_NADPH-dependent_FMN_reductase


id: CL:3809
description: Mostly uncharacterized, incl. Nitroreductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3809_Mostly_uncharacterized,_incl._Nitroreductase_family


id: CL:3822
description: Mixed, incl. Glycine, serine and threonine metabolism, and Sodium/solute symporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3822_Mixed,_incl._Glycine,_serine_and_threonine_metabolism,_and_Sodium/solute_symporter


id: CL:3825
description: NTF2-like domain superfamily, and Glycine, serine and threonine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3825_NTF2-like_domain_superfamily,_and_Glycine,_serine_and_threonine_metabolism


id: CL:3845
description: Mixed, incl. TusA-like domain, and Benzoate degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3845_Mixed,_incl._TusA-like_domain,_and_Benzoate_degradation


id: CL:3846
description: Mixed, incl. TusA-like domain, and Selenocompound metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3846_Mixed,_incl._TusA-like_domain,_and_Selenocompound_metabolism


id: CL:3848
description: Mixed, incl. TusA-like domain, and Carbohydrate kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3848_Mixed,_incl._TusA-like_domain,_and_Carbohydrate_kinase


id: CL:3860
description: Mixed, incl. DsrEFH-like, and Translational readthrough
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3860_Mixed,_incl._DsrEFH-like,_and_Translational_readthrough


id: CL:3869
description: Mixed, incl. Benzoate degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3869_Mixed,_incl._Benzoate_degradation


id: CL:3878
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3878_Mixed,_incl._Inorganic_phosphate_transmembrane_transporter_activity,_and_Glycerophospholipid_metabolism

description:
  Mixed, incl. Inorganic phosphate transmembrane transporter activity, and Glycerophospholipid metabolism


id: CL:3880
description: Mixed, incl. Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily, and DNA modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3880_Mixed,_incl._Dinitrogenase_iron-molybdenum_cofactor_biosynthesis_superfamily,_and_DNA_modification


id: CL:3881
description: Mixed, incl. Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily, and DNA modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3881_Mixed,_incl._Dinitrogenase_iron-molybdenum_cofactor_biosynthesis_superfamily,_and_DNA_modification


id: CL:3882
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3882_Mixed,_incl._Dinitrogenase_iron-molybdenum_cofactor_biosynthesis_superfamily,_and_CobQ/CobB/MinD/ParA_nucleotide_binding_domain

description:
  Mixed, incl. Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily, and CobQ/CobB/MinD/ParA nucleotide binding domain


id: CL:3885
description: MTH1175 domain, and CobQ/CobB/MinD/ParA nucleotide binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3885_MTH1175_domain,_and_CobQ/CobB/MinD/ParA_nucleotide_binding_domain


id: CL:3903
description: Mixed, incl. DNA methylase, N-4 cytosine-specific, conserved site, and tRNA 3-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3903_Mixed,_incl._DNA_methylase,_N-4_cytosine-specific,_conserved_site,_and_tRNA_3-end_processing


id: CL:3905
description: DNA modification, and tRNA 3-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3905_DNA_modification,_and_tRNA_3-end_processing


id: CL:3922
description: Mixed, incl. Tubulin/FtsZ-like, C-terminal domain, and HAD superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3922_Mixed,_incl._Tubulin/FtsZ-like,_C-terminal_domain,_and_HAD_superfamily


id: CL:393
description: Mixed, incl. IPP transferase, and Band 7 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:393_Mixed,_incl._IPP_transferase,_and_Band_7_domain


id: CL:3936
description: Mixed, incl. Inorganic phosphate transmembrane transporter activity, and Phosphate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3936_Mixed,_incl._Inorganic_phosphate_transmembrane_transporter_activity,_and_Phosphate_ion_transport


id: CL:3938
description: Inorganic phosphate transmembrane transporter activity, and Phosphate ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3938_Inorganic_phosphate_transmembrane_transporter_activity,_and_Phosphate_ion_binding


id: CL:394
description: Mixed, incl. IPP transferase, and 16S rRNA methyltransferase RsmB/F
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:394_Mixed,_incl._IPP_transferase,_and_16S_rRNA_methyltransferase_RsmB/F


id: CL:3940
description: Phosphate transport, and Phosphate ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3940_Phosphate_transport,_and_Phosphate_ion_binding


id: CL:3961
description: Mixed, incl. Polyol catabolic process, and Membrane transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3961_Mixed,_incl._Polyol_catabolic_process,_and_Membrane_transport_protein


id: CL:3973
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3973_Mixed,_incl._Pyruvate-formate_lyase-activating_enzyme,_predicted,_and_Degradation_of_aromatic_compounds

description:
  Mixed, incl. Pyruvate-formate lyase-activating enzyme, predicted, and Degradation of aromatic compounds


id: CL:3975
description: Pyruvate-formate lyase-activating enzyme, predicted, and Degradation of aromatic compounds
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3975_Pyruvate-formate_lyase-activating_enzyme,_predicted,_and_Degradation_of_aromatic_compounds


id: CL:3995
description: Protein transmembrane transport, and Protein refolding
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3995_Protein_transmembrane_transport,_and_Protein_refolding


id: CL:3998
description: Protein transmembrane transport, and Protein refolding
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:3998_Protein_transmembrane_transport,_and_Protein_refolding


id: CL:4000
description: Protein transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:4000_Protein_transmembrane_transport


id: CL:4004
description: Protein transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:4004_Protein_transmembrane_transport


id: CL:4049
description: Amino acid transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:4049_Amino_acid_transport,_and_ABC_transporter,_permease


id: CL:4050
description: Amino acid transport, and Urea metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:4050_Amino_acid_transport,_and_Urea_metabolic_process


id: CL:4051
description: Amino acid transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:4051_Amino_acid_transport,_and_ABC_transporter,_permease


id: CL:4054
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:4054_Branched-chain_amino_acid_transmembrane_transporter_activity,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal

description:
  Branched-chain amino acid transmembrane transporter activity, and Branched-chain amino acid ATP-binding cassette transporter, C-terminal


id: CL:4055
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:4055_Branched-chain_amino_acid_transmembrane_transporter_activity,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal

description:
  Branched-chain amino acid transmembrane transporter activity, and Branched-chain amino acid ATP-binding cassette transporter, C-terminal


id: CL:4056
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:4056_Mixed,_incl._High-affinity_branched-chain_amino_acid_transport_ATP-binding_protein,_and_Leu/Ile/Val-binding_protein

description:
  Mixed, incl. High-affinity branched-chain amino acid transport ATP-binding protein, and Leu/Ile/Val-binding protein


id: CL:406
description: Band 7 domain, and Rhomboid family
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:406_Band_7_domain,_and_Rhomboid_family


id: CL:4065
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:4065_Branched-chain_amino_acid_transmembrane_transporter_activity,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal

description:
  Branched-chain amino acid transmembrane transporter activity, and Branched-chain amino acid ATP-binding cassette transporter, C-terminal


id: CL:4074
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:4074_Mixed,_incl._High-affinity_branched-chain_amino_acid_transport_ATP-binding_protein,_and_Leu/Ile/Val-binding_protein

description:
  Mixed, incl. High-affinity branched-chain amino acid transport ATP-binding protein, and Leu/Ile/Val-binding protein


id: CL:4084
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:4084_Periplasmic_binding_protein_domain,_and_Branched-chain_amino_acid_transmembrane_transporter_activity

description:
  Periplasmic binding protein domain, and Branched-chain amino acid transmembrane transporter activity


id: CL:4096
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:4096_Mixed,_incl._Long-chain_fatty_acid_metabolic_process,_and_Branched-chain_amino_acid_transmembrane_transporter_activity

description:
  Mixed, incl. Long-chain fatty acid metabolic process, and Branched-chain amino acid transmembrane transporter activity


id: CL:4100
description: Mixed, incl. Long-chain fatty acid metabolic process, and Leu/Ile/Val-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:4100_Mixed,_incl._Long-chain_fatty_acid_metabolic_process,_and_Leu/Ile/Val-binding_protein


id: CL:4118
description: Mixed, incl. Urea metabolic process, and Nickel insertion
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:4118_Mixed,_incl._Urea_metabolic_process,_and_Nickel_insertion


id: CL:4132
description: Branched-chain amino acid transmembrane transporter activity, and Armadillo-like helical
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:4132_Branched-chain_amino_acid_transmembrane_transporter_activity,_and_Armadillo-like_helical


id: CL:4142
description: ABC transporter, permease, and ABC transporter-like, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:4142_ABC_transporter,_permease,_and_ABC_transporter-like,_conserved_site


id: CL:4162
description: Mixed, incl. Extracellular polysaccharide metabolic process, and YgjP-like, metallopeptidase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:4162_Mixed,_incl._Extracellular_polysaccharide_metabolic_process,_and_YgjP-like,_metallopeptidase_domain


id: CL:4163
description: Mixed, incl. Extracellular polysaccharide metabolic process, and LonB-like, AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:4163_Mixed,_incl._Extracellular_polysaccharide_metabolic_process,_and_LonB-like,_AAA_domain


id: CL:4167
description: Extracellular polysaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:4167_Extracellular_polysaccharide_metabolic_process


id: CL:417
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:417_Isoprenoid_metabolic_process,_and_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Isoprenoid metabolic process, and Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: CL:418
description: Isoprene biosynthesis, and De novo CTP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:418_Isoprene_biosynthesis,_and_De_novo_CTP_biosynthetic_process


id: CL:4181
description: Mixed, incl. LonB-like, AAA domain, and Universal stress protein A family
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:4181_Mixed,_incl._LonB-like,_AAA_domain,_and_Universal_stress_protein_A_family


id: CL:419
description: Mixed, incl. De novo CTP biosynthetic process, and CDP-diacylglycerol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:419_Mixed,_incl._De_novo_CTP_biosynthetic_process,_and_CDP-diacylglycerol_metabolic_process


id: CL:4190
description: Mixed, incl. YgjP-like, metallopeptidase domain, and PD-(D/E)XK nuclease superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:4190_Mixed,_incl._YgjP-like,_metallopeptidase_domain,_and_PD-(D/E)XK_nuclease_superfamily


id: CL:4193
description: PD-(D/E)XK nuclease superfamily, and Transcription regulator complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:4193_PD-(D/E)XK_nuclease_superfamily,_and_Transcription_regulator_complex


id: CL:4217
description: Response to virus, and Transposase, mutator type
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:4217_Response_to_virus,_and_Transposase,_mutator_type


id: CL:4218
description: Response to virus, and Helix-turn-helix, type 11
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:4218_Response_to_virus,_and_Helix-turn-helix,_type_11


id: CL:4219
description: Response to virus, and Helix-turn-helix, type 11
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:4219_Response_to_virus,_and_Helix-turn-helix,_type_11


id: CL:4223
description: Maintenance of DNA repeat elements, and tRNA endonuclease-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:4223_Maintenance_of_DNA_repeat_elements,_and_tRNA_endonuclease-like_domain_superfamily


id: CL:4234
description: RAMP superfamily, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:4234_RAMP_superfamily,_and_Response_to_virus


id: CL:4245
description: Response to virus, and Helix-turn-helix, type 11
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:4245_Response_to_virus,_and_Helix-turn-helix,_type_11


id: CL:4247
description: Maintenance of DNA repeat elements, and CRISPR-associated Cas3-type HD domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:4247_Maintenance_of_DNA_repeat_elements,_and_CRISPR-associated_Cas3-type_HD_domain


id: CL:4281
description: RAMP superfamily, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:4281_RAMP_superfamily,_and_Response_to_virus


id: CL:441
description: Polyprenyl synthetase, and DNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:441_Polyprenyl_synthetase,_and_DNA_catabolic_process


id: CL:455
description: Mixed, incl. DNA repair, and DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:455_Mixed,_incl._DNA_repair,_and_DNA_replication


id: CL:461
description: DNA replication, and DNA repair complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:461_DNA_replication,_and_DNA_repair_complex


id: CL:463
description: DNA damage sensor activity, and DNA-directed DNA polymerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:463_DNA_damage_sensor_activity,_and_DNA-directed_DNA_polymerase


id: CL:482
description: DNA polymerase complex, and Single-stranded DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:482_DNA_polymerase_complex,_and_Single-stranded_DNA_binding


id: CL:515
description: Mixed, incl. Sigma-70 factor, region 1.2, and CarD-like/TRCF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:515_Mixed,_incl._Sigma-70_factor,_region_1.2,_and_CarD-like/TRCF_domain


id: CL:534
description: glycyl-tRNA aminoacylation, and SurA N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:534_glycyl-tRNA_aminoacylation,_and_SurA_N-terminal_domain


id: CL:550
description: Mixed, incl. Stress response, and Peptidase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:550_Mixed,_incl._Stress_response,_and_Peptidase_complex


id: CL:552
description: Protein folding, and Serine protease
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:552_Protein_folding,_and_Serine_protease


id: CL:554
description: Mixed, incl. Protein folding chaperone, and Peptidase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:554_Mixed,_incl._Protein_folding_chaperone,_and_Peptidase_complex


id: CL:557
description: Protein folding chaperone, and Heat shock protein binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:557_Protein_folding_chaperone,_and_Heat_shock_protein_binding


id: CL:595
description: Mixed, incl. Organelle lumen, and Creatinase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:595_Mixed,_incl._Organelle_lumen,_and_Creatinase,_N-terminal


id: CL:604
description: Mixed, incl. K Homology domain, type 1, and tRNA synthetases class I (W and Y)
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:604_Mixed,_incl._K_Homology_domain,_type_1,_and_tRNA_synthetases_class_I_(W_and_Y)


id: CL:614
description: Biosynthesis of amino acids, and Carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:614_Biosynthesis_of_amino_acids,_and_Carbon_metabolism


id: CL:615
description: Biosynthesis of amino acids, and Carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:615_Biosynthesis_of_amino_acids,_and_Carbon_metabolism


id: CL:616
description: Carbon metabolism, and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:616_Carbon_metabolism,_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:617
description: Mixed, incl. Citrate cycle (TCA cycle), and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:617_Mixed,_incl._Citrate_cycle_(TCA_cycle),_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:618
description: Citrate cycle (TCA cycle), and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:618_Citrate_cycle_(TCA_cycle),_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:621
description: Butanoate metabolism, and Pyruvate-flavodoxin oxidoreductase, central domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:621_Butanoate_metabolism,_and_Pyruvate-flavodoxin_oxidoreductase,_central_domain


id: CL:623
description: Thiamin diphosphate-binding fold, and Pyruvate ferredoxin/flavodoxin oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:623_Thiamin_diphosphate-binding_fold,_and_Pyruvate_ferredoxin/flavodoxin_oxidoreductase


id: CL:64
description: Gene expression, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:64_Gene_expression,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:641
description: acetyl-CoA biosynthetic process from pyruvate
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:641_acetyl-CoA_biosynthetic_process_from_pyruvate


id: CL:65
description: Peptide metabolic process, and RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:65_Peptide_metabolic_process,_and_RNA_metabolic_process


id: CL:653
description: Tricarboxylic acid cycle, and Fumarate reductase flavoprotein C-term
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:653_Tricarboxylic_acid_cycle,_and_Fumarate_reductase_flavoprotein_C-term


id: CL:669
description: Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:669_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:67
description: Peptide metabolic process, and RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:67_Peptide_metabolic_process,_and_RNA_metabolic_process


id: CL:68
description: Peptide metabolic process, and Protein export
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:68_Peptide_metabolic_process,_and_Protein_export


id: CL:689
description: Mixed, incl. Fatty acid biosynthetic process, and AMP-binding enzyme C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:689_Mixed,_incl._Fatty_acid_biosynthetic_process,_and_AMP-binding_enzyme_C-terminal_domain


id: CL:69
description: Peptide metabolic process, and Protein export
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:69_Peptide_metabolic_process,_and_Protein_export


id: CL:691
description: Fatty acid metabolism, and AMP-binding enzyme C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:691_Fatty_acid_metabolism,_and_AMP-binding_enzyme_C-terminal_domain


id: CL:70
description: Peptide metabolic process, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:70_Peptide_metabolic_process,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:71
description: Peptide metabolic process, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:71_Peptide_metabolic_process,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:718
description: Mixed, incl. malonyl-CoA metabolic process, and acetyl-CoA carboxylase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:718_Mixed,_incl._malonyl-CoA_metabolic_process,_and_acetyl-CoA_carboxylase_complex


id: CL:72
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:72_Ribosome,_and_Translation_regulator_activity


id: CL:738
description: Carbon metabolism, and One-carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:738_Carbon_metabolism,_and_One-carbon_metabolism


id: CL:739
description: Mixed, incl. Glycine metabolic process, and One-carbon metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:739_Mixed,_incl._Glycine_metabolic_process,_and_One-carbon_metabolic_process


id: CL:740
description: Mixed, incl. Glycine metabolic process, and Ammonia-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:740_Mixed,_incl._Glycine_metabolic_process,_and_Ammonia-lyase_activity


id: CL:75
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:75_Ribosome,_and_Translation_regulator_activity


id: CL:764
description: One-carbon metabolic process, and TGS-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:764_One-carbon_metabolic_process,_and_TGS-like


id: CL:781
description: Glycolytic process, and Sugar-phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:781_Glycolytic_process,_and_Sugar-phosphatase_activity


id: CL:784
description: Phosphoglycerate kinase, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:784_Phosphoglycerate_kinase,_and_Glycolysis


id: CL:809
description: Cellular amino acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:809_Cellular_amino_acid_biosynthetic_process


id: CL:810
description: Glutamine family amino acid biosynthetic process, and Aspartate family amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:810_Glutamine_family_amino_acid_biosynthetic_process,_and_Aspartate_family_amino_acid_metabolic_process


id: CL:811
description: Glutamine family amino acid biosynthetic process, and Lysine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:811_Glutamine_family_amino_acid_biosynthetic_process,_and_Lysine_biosynthetic_process


id: CL:852
description: Mixed, incl. Novobiocin biosynthesis, and Ammonia-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:852_Mixed,_incl._Novobiocin_biosynthesis,_and_Ammonia-lyase_activity


id: CL:863
description: Phenylalanine, tyrosine and tryptophan biosynthesis, and Histidine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:863_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis,_and_Histidine_biosynthesis


id: CL:864
description: Aromatic amino acid family biosynthetic process, and DeoC/FbaB/LacD aldolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:864_Aromatic_amino_acid_family_biosynthetic_process,_and_DeoC/FbaB/LacD_aldolase


id: CL:866
description: Tryptophan biosynthesis, and Glutamine amidotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:866_Tryptophan_biosynthesis,_and_Glutamine_amidotransferase


id: CL:90
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:90_Structural_constituent_of_ribosome


id: CL:916
description: Glutamate metabolic process, and Glutamine amidotransferase type 2 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:916_Glutamate_metabolic_process,_and_Glutamine_amidotransferase_type_2_domain


id: CL:93
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:93_Structural_constituent_of_ribosome


id: CL:931
description: Ribonucleoside monophosphate metabolic process, and Pyrimidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:931_Ribonucleoside_monophosphate_metabolic_process,_and_Pyrimidine_metabolism


id: CL:932
description: Ribonucleoside monophosphate biosynthetic process, and Nucleoside phosphate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:932_Ribonucleoside_monophosphate_biosynthetic_process,_and_Nucleoside_phosphate_catabolic_process


id: CL:935
description: Ribonucleoside monophosphate biosynthetic process, and IMP cyclohydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:935_Ribonucleoside_monophosphate_biosynthetic_process,_and_IMP_cyclohydrolase_activity


id: CL:936
description: Purine nucleoside monophosphate biosynthetic process, and IMP cyclohydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:936_Purine_nucleoside_monophosphate_biosynthetic_process,_and_IMP_cyclohydrolase_activity


id: CL:938
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:938_De_novo_IMP_biosynthetic_process


id: CL:941
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:941_De_novo_IMP_biosynthetic_process


id: CL:962
description: GMP biosynthetic process, and Purine nucleotide salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:962_GMP_biosynthetic_process,_and_Purine_nucleotide_salvage


id: CL:979
description: De novo UMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1635258_STRINGid_CL:979_De_novo_UMP_biosynthetic_process


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 10
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0002926
description: tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation
memo: https://amigo.geneontology.org/amigo/term/GO:0002926
golevel: 13
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0002926_tRNA_wobble_base_5-methoxycarbonylmethyl-2-thiouridinylation


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003864
description: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003864
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0003864_3-methyl-2-oxobutanoate_hydroxymethyltransferase_activity


id: GO:0003882
description: CDP-diacylglycerol-serine O-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003882
golevel: 6
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0003882_CDP-diacylglycerol-serine_O-phosphatidyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 6
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0004015
description: adenosylmethionine-8-amino-7-oxononanoate transaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004015
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0004015_adenosylmethionine-8-amino-7-oxononanoate_transaminase_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004316
description: 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004316
golevel: 6
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0004316_3-oxoacyl-[acyl-carrier-protein]_reductase_(NADPH)_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
golevel: 6
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004318
description: Enoyl-[acyl-carrier-protein] reductase (NADH) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004318
golevel: 6
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0004318_Enoyl-[acyl-carrier-protein]_reductase_(NADH)_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004471
description: Malate dehydrogenase (decarboxylating) (NAD+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004471
golevel: 6
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0004471_Malate_dehydrogenase_(decarboxylating)_(NAD+)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 6
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004489
description: Methylenetetrahydrofolate reductase (NAD(P)H) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004489
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0004489_Methylenetetrahydrofolate_reductase_(NAD(P)H)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004715
description: Non-membrane spanning protein tyrosine kinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004715
golevel: 7
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0004715_Non-membrane_spanning_protein_tyrosine_kinase_activity


id: GO:0004719
description: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004719
golevel: 8
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0004719_protein-L-isoaspartate_(D-aspartate)_O-methyltransferase_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0005315
description: Inorganic phosphate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005315
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0005315_Inorganic_phosphate_transmembrane_transporter_activity


id: GO:0005477
description: Pyruvate secondary active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005477
golevel: 7
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0005477_Pyruvate_secondary_active_transmembrane_transporter_activity


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 11
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0008028
description: Monocarboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008028
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0008028_Monocarboxylic_acid_transmembrane_transporter_activity


id: GO:0008425
description: 2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008425
golevel: 7
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0008425_2-polyprenyl-6-methoxy-1,4-benzoquinone_methyltransferase_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 7
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008685
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008685
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0008685_2-C-methyl-D-erythritol_2,4-cyclodiphosphate_synthase_activity


id: GO:0008686
description: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008686
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0008686_3,4-dihydroxy-2-butanone-4-phosphate_synthase_activity


id: GO:0008690
description: 3-deoxy-manno-octulosonate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008690
golevel: 6
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0008690_3-deoxy-manno-octulosonate_cytidylyltransferase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
golevel: 6
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008759
description: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008759
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0008759_UDP-3-O-[3-hydroxymyristoyl]_N-acetylglucosamine_deacetylase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008780
description: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008780
golevel: 6
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0008780_acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine_O-acyltransferase_activity


id: GO:0008817
description: cob(I)yrinic acid a,c-diamide adenosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008817
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0008817_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008939
description: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008939
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0008939_Nicotinate-nucleotide-dimethylbenzimidazole_phosphoribosyltransferase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0008965
description: Phosphoenolpyruvate-protein phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008965
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0008965_Phosphoenolpyruvate-protein_phosphotransferase_activity


id: GO:0008982
description: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008982
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0008982_protein-N(PI)-phosphohistidine-sugar_phosphotransferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 6
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 9
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 9
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009139
description: Pyrimidine nucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009139
golevel: 9
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0009139_Pyrimidine_nucleoside_diphosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 9
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009157
description: Deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009157
golevel: 9
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0009157_Deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 10
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 9
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 10
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009175
description: Pyrimidine ribonucleoside monophosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009175
golevel: 10
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0009175_Pyrimidine_ribonucleoside_monophosphate_catabolic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 9
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 10
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009196
description: Pyrimidine deoxyribonucleoside diphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009196
golevel: 9
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0009196_Pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process


id: GO:0009197
description: Pyrimidine deoxyribonucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009197
golevel: 10
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0009197_Pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 10
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 9
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 10
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009210
description: Pyrimidine ribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009210
golevel: 10
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0009210_Pyrimidine_ribonucleoside_triphosphate_catabolic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 9
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 10
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 10
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 9
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 10
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009401
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system
memo: https://amigo.geneontology.org/amigo/term/GO:0009401
golevel: 8
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0009401_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system


id: GO:0009427
description: Bacterial-type flagellum basal body, distal rod, L ring
memo: https://amigo.geneontology.org/amigo/term/GO:0009427
golevel: 8
name:
  GOCC.STRING_v12.0_1635258_STRINGid_GO:0009427_Bacterial-type_flagellum_basal_body,_distal_rod,_L_ring


id: GO:0009428
description: Bacterial-type flagellum basal body, distal rod, P ring
memo: https://amigo.geneontology.org/amigo/term/GO:0009428
golevel: 8
name:
  GOCC.STRING_v12.0_1635258_STRINGid_GO:0009428_Bacterial-type_flagellum_basal_body,_distal_rod,_P_ring


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 6
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 6
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 6
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0010604
description: Positive regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010604
golevel: 5
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0010604_Positive_regulation_of_macromolecule_metabolic_process


id: GO:0010605
description: Negative regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010605
golevel: 5
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0010605_Negative_regulation_of_macromolecule_metabolic_process


id: GO:0015169
description: glycerol-3-phosphate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015169
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0015169_glycerol-3-phosphate_transmembrane_transporter_activity


id: GO:0015173
description: Aromatic amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015173
golevel: 6
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0015173_Aromatic_amino_acid_transmembrane_transporter_activity


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
golevel: 3
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015355
description: Secondary active monocarboxylate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015355
golevel: 6
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0015355_Secondary_active_monocarboxylate_transmembrane_transporter_activity


id: GO:0015415
description: ATPase-coupled phosphate ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015415
golevel: 7
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0015415_ATPase-coupled_phosphate_ion_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015605
description: Organophosphate ester transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015605
golevel: 3
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0015605_Organophosphate_ester_transmembrane_transporter_activity


id: GO:0015658
description: Branched-chain amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015658
golevel: 6
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0015658_Branched-chain_amino_acid_transmembrane_transporter_activity


id: GO:0015975
description: Energy derivation by oxidation of reduced inorganic compounds
memo: https://amigo.geneontology.org/amigo/term/GO:0015975
golevel: 4
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0015975_Energy_derivation_by_oxidation_of_reduced_inorganic_compounds


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016622
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, cytochrome as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016622
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016622_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_cytochrome_as_acceptor


id: GO:0016625
memo: https://amigo.geneontology.org/amigo/term/GO:0016625
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016625_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_iron-sulfur_protein_as_acceptor

description:
  Oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016641
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016641
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016641_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_oxygen_as_acceptor


id: GO:0016642
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016642
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016642_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_disulfide_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016657
description: Oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016657
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016657_Oxidoreductase_activity,_acting_on_NAD(P)H,_nitrogenous_group_as_acceptor


id: GO:0016661
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016661
golevel: 3
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016661_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors


id: GO:0016663
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016663
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016663_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors,_oxygen_as_acceptor


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016672
memo: https://amigo.geneontology.org/amigo/term/GO:0016672
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016672_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor


id: GO:0016673
description: Oxidoreductase activity, acting on a sulfur group of donors, iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016673
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016673_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_iron-sulfur_protein_as_acceptor


id: GO:0016684
description: Oxidoreductase activity, acting on peroxide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016684
golevel: 3
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016684_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


id: GO:0016699
description: Oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016699
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016699_Oxidoreductase_activity,_acting_on_hydrogen_as_donor,_iron-sulfur_protein_as_acceptor


id: GO:0016701
description: Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
memo: https://amigo.geneontology.org/amigo/term/GO:0016701
golevel: 3
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016701_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen


id: GO:0016702
memo: https://amigo.geneontology.org/amigo/term/GO:0016702
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016702_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_two_atoms_of_oxygen

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen


id: GO:0016705
memo: https://amigo.geneontology.org/amigo/term/GO:0016705
golevel: 3
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016705_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: GO:0016709
memo: https://amigo.geneontology.org/amigo/term/GO:0016709
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016709_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen


id: GO:0016716
memo: https://amigo.geneontology.org/amigo/term/GO:0016716
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016716_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_another_compound_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen


id: GO:0016721
description: Oxidoreductase activity, acting on superoxide radicals as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016721
golevel: 3
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016721_Oxidoreductase_activity,_acting_on_superoxide_radicals_as_acceptor


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016730
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016730
golevel: 3
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016730_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016773
description: Phosphotransferase activity, alcohol group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016773
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016773_Phosphotransferase_activity,_alcohol_group_as_acceptor


id: GO:0016774
description: Phosphotransferase activity, carboxyl group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016774
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016774_Phosphotransferase_activity,_carboxyl_group_as_acceptor


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
golevel: 6
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016822
description: Hydrolase activity, acting on acid carbon-carbon bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016822
golevel: 3
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016822_Hydrolase_activity,_acting_on_acid_carbon-carbon_bonds


id: GO:0016823
description: Hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances
memo: https://amigo.geneontology.org/amigo/term/GO:0016823
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016823_Hydrolase_activity,_acting_on_acid_carbon-carbon_bonds,_in_ketonic_substances


id: GO:0016837
description: Carbon-oxygen lyase activity, acting on polysaccharides
memo: https://amigo.geneontology.org/amigo/term/GO:0016837
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016837_Carbon-oxygen_lyase_activity,_acting_on_polysaccharides


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016868
description: Intramolecular transferase activity, phosphotransferases
memo: https://amigo.geneontology.org/amigo/term/GO:0016868
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016868_Intramolecular_transferase_activity,_phosphotransferases


id: GO:0016869
description: Intramolecular transferase activity, transferring amino groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016869
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016869_Intramolecular_transferase_activity,_transferring_amino_groups


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016888
description: Endodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016888
golevel: 7
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016888_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016889
description: Endodeoxyribonuclease activity, producing 3-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016889
golevel: 7
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016889_Endodeoxyribonuclease_activity,_producing_3-phosphomonoesters


id: GO:0016891
description: Endoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016891
golevel: 7
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016891_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
golevel: 6
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016894
memo: https://amigo.geneontology.org/amigo/term/GO:0016894
golevel: 6
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016894_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_3-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3-phosphomonoesters


id: GO:0016895
description: Exodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016895
golevel: 7
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016895_Exodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016896
description: Exoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016896
golevel: 7
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016896_Exoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016901
memo: https://amigo.geneontology.org/amigo/term/GO:0016901
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016901_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor


id: GO:0016903
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016903
golevel: 3
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0016903_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors


id: GO:0018315
description: Molybdenum incorporation into molybdenum-molybdopterin complex
memo: https://amigo.geneontology.org/amigo/term/GO:0018315
golevel: 7
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0018315_Molybdenum_incorporation_into_molybdenum-molybdopterin_complex


id: GO:0018339
description: peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid
memo: https://amigo.geneontology.org/amigo/term/GO:0018339
golevel: 8
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0018339_peptidyl-L-beta-methylthioaspartic_acid_biosynthetic_process_from_peptidyl-aspartic_acid


id: GO:0019171
description: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019171
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0019171_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0019219
description: Regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019219
golevel: 5
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0019219_Regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0019288
description: Isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0019288
golevel: 8
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0019288_Isopentenyl_diphosphate_biosynthetic_process,_methylerythritol_4-phosphate_pathway


id: GO:0019829
description: ATPase-coupled cation transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019829
golevel: 6
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0019829_ATPase-coupled_cation_transmembrane_transporter_activity


id: GO:0030435
description: Sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0030435
golevel: 3
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0030435_Sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0030604
description: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0030604
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0030604_1-deoxy-D-xylulose-5-phosphate_reductoisomerase_activity


id: GO:0030698
description: 5,10-methylenetetrahydrofolate-dependent tRNA (m5U54) methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0030698
golevel: 9
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0030698_5,10-methylenetetrahydrofolate-dependent_tRNA_(m5U54)_methyltransferase_activity


id: GO:0031234
description: Extrinsic component of cytoplasmic side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031234
golevel: 6
name:
  GOCC.STRING_v12.0_1635258_STRINGid_GO:0031234_Extrinsic_component_of_cytoplasmic_side_of_plasma_membrane


id: GO:0031235
description: Intrinsic component of the cytoplasmic side of the plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031235
name:
  GOCC.STRING_v12.0_1635258_STRINGid_GO:0031235_Intrinsic_component_of_the_cytoplasmic_side_of_the_plasma_membrane


id: GO:0031250
description: Anaerobic ribonucleoside-triphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031250
golevel: 4
name:
  GOCC.STRING_v12.0_1635258_STRINGid_GO:0031250_Anaerobic_ribonucleoside-triphosphate_reductase_complex


id: GO:0031554
description: Regulation of DNA-templated transcription, termination
memo: https://amigo.geneontology.org/amigo/term/GO:0031554
golevel: 11
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0031554_Regulation_of_DNA-templated_transcription,_termination


id: GO:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
golevel: 3
name:
  GOCC.STRING_v12.0_1635258_STRINGid_GO:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GO:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
golevel: 3
name:
  GOCC.STRING_v12.0_1635258_STRINGid_GO:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GO:0033283
description: ATPase-coupled organic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033283
golevel: 6
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0033283_ATPase-coupled_organic_acid_transmembrane_transporter_activity


id: GO:0033284
description: ATPase-coupled carboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033284
golevel: 7
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0033284_ATPase-coupled_carboxylic_acid_transmembrane_transporter_activity


id: GO:0033362
description: Lysine biosynthetic process via diaminopimelate, diaminopimelate-aminotransferase pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0033362
golevel: 12
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0033362_Lysine_biosynthetic_process_via_diaminopimelate,_diaminopimelate-aminotransferase_pathway


id: GO:0033467
description: CMP-keto-3-deoxy-D-manno-octulosonic acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033467
golevel: 7
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0033467_CMP-keto-3-deoxy-D-manno-octulosonic_acid_metabolic_process


id: GO:0033468
description: CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033468
golevel: 8
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0033468_CMP-keto-3-deoxy-D-manno-octulosonic_acid_biosynthetic_process


id: GO:0033695
description: Oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0033695
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0033695_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_quinone_or_similar_compound_as_acceptor


id: GO:0033818
description: Beta-ketoacyl-acyl-carrier-protein synthase III activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033818
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0033818_Beta-ketoacyl-acyl-carrier-protein_synthase_III_activity


id: GO:0034023
description: 5-(carboxyamino)imidazole ribonucleotide mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034023
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0034023_5-(carboxyamino)imidazole_ribonucleotide_mutase_activity


id: GO:0034249
description: Negative regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034249
golevel: 6
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0034249_Negative_regulation_of_cellular_amide_metabolic_process


id: GO:0034250
description: Positive regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034250
golevel: 6
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0034250_Positive_regulation_of_cellular_amide_metabolic_process


id: GO:0034404
description: Nucleobase-containing small molecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034404
golevel: 6
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0034404_Nucleobase-containing_small_molecule_biosynthetic_process


id: GO:0034656
description: Nucleobase-containing small molecule catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034656
golevel: 6
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0034656_Nucleobase-containing_small_molecule_catabolic_process


id: GO:0035592
description: Establishment of protein localization to extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0035592
golevel: 6
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0035592_Establishment_of_protein_localization_to_extracellular_region


id: GO:0035998
description: 7,8-dihydroneopterin 3-triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0035998
golevel: 6
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0035998_7,8-dihydroneopterin_3-triphosphate_biosynthetic_process


id: GO:0036361
description: Racemase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0036361
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0036361_Racemase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0042040
description: Metal incorporation into metallo-molybdopterin complex
memo: https://amigo.geneontology.org/amigo/term/GO:0042040
golevel: 6
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0042040_Metal_incorporation_into_metallo-molybdopterin_complex


id: GO:0042083
description: 5,10-methylenetetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042083
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0042083_5,10-methylenetetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042084
description: 5-methyltetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042084
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0042084_5-methyltetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042777
description: Proton motive force-driven plasma membrane ATP synthesis
memo: https://amigo.geneontology.org/amigo/term/GO:0042777
golevel: 13
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0042777_Proton_motive_force-driven_plasma_membrane_ATP_synthesis


id: GO:0043165
description: Gram-negative-bacterium-type cell outer membrane assembly
memo: https://amigo.geneontology.org/amigo/term/GO:0043165
golevel: 6
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0043165_Gram-negative-bacterium-type_cell_outer_membrane_assembly


id: GO:0043225
description: ATPase-coupled inorganic anion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043225
golevel: 6
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0043225_ATPase-coupled_inorganic_anion_transmembrane_transporter_activity


id: GO:0043333
description: 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043333
golevel: 8
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0043333_2-octaprenyl-6-methoxy-1,4-benzoquinone_methylase_activity


id: GO:0043709
description: Cell adhesion involved in single-species biofilm formation
memo: https://amigo.geneontology.org/amigo/term/GO:0043709
golevel: 7
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0043709_Cell_adhesion_involved_in_single-species_biofilm_formation


id: GO:0043772
description: Acyl-phosphate glycerol-3-phosphate acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043772
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0043772_Acyl-phosphate_glycerol-3-phosphate_acyltransferase_activity


id: GO:0043811
description: Phosphate:acyl-[acyl carrier protein] acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043811
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0043811_Phosphate:acyl-[acyl_carrier_protein]_acyltransferase_activity


id: GO:0044419
description: Biological process involved in interspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0044419
golevel: 1
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0044419_Biological_process_involved_in_interspecies_interaction_between_organisms


id: GO:0044769
description: ATPase activity, coupled to transmembrane movement of ions, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0044769
golevel: 7
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0044769_ATPase_activity,_coupled_to_transmembrane_movement_of_ions,_rotational_mechanism


id: GO:0045261
description: Proton-transporting ATP synthase complex, catalytic core F(1)
memo: https://amigo.geneontology.org/amigo/term/GO:0045261
golevel: 6
name:
  GOCC.STRING_v12.0_1635258_STRINGid_GO:0045261_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: GO:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
golevel: 6
name:
  GOCC.STRING_v12.0_1635258_STRINGid_GO:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GO:0045934
description: Negative regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045934
golevel: 6
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0045934_Negative_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0045935
description: Positive regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045935
golevel: 6
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0045935_Positive_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0046429
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046429
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0046429_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_synthase_activity


id: GO:0046537
description: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046537
golevel: 6
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0046537_2,3-bisphosphoglycerate-independent_phosphoglycerate_mutase_activity


id: GO:0046857
memo: https://amigo.geneontology.org/amigo/term/GO:0046857
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0046857_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors,_with_NAD_or_NADP_as_acceptor

description:
  Oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor


id: GO:0046912
description: Acyltransferase activity, acyl groups converted into alkyl on transfer
memo: https://amigo.geneontology.org/amigo/term/GO:0046912
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0046912_Acyltransferase_activity,_acyl_groups_converted_into_alkyl_on_transfer


id: GO:0046915
description: Transition metal ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046915
golevel: 6
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0046915_Transition_metal_ion_transmembrane_transporter_activity


id: GO:0046933
description: Proton-transporting ATP synthase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046933
golevel: 8
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0046933_Proton-transporting_ATP_synthase_activity,_rotational_mechanism


id: GO:0046961
description: Proton-transporting ATPase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046961
golevel: 8
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0046961_Proton-transporting_ATPase_activity,_rotational_mechanism


id: GO:0046992
description: Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond
memo: https://amigo.geneontology.org/amigo/term/GO:0046992
golevel: 3
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0046992_Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond


id: GO:0047151
description: methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase (FADH2-oxidizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047151
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0047151_methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase_(FADH2-oxidizing)_activity


id: GO:0047304
description: 2-aminoethylphosphonate-pyruvate transaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047304
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0047304_2-aminoethylphosphonate-pyruvate_transaminase_activity


id: GO:0047334
description: diphosphate-fructose-6-phosphate 1-phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047334
golevel: 7
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0047334_diphosphate-fructose-6-phosphate_1-phosphotransferase_activity


id: GO:0047451
description: 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047451
golevel: 6
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0047451_3-hydroxyoctanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0047480
description: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047480
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0047480_UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine_ligase_activity


id: GO:0048646
description: Anatomical structure formation involved in morphogenesis
memo: https://amigo.geneontology.org/amigo/term/GO:0048646
golevel: 2
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0048646_Anatomical_structure_formation_involved_in_morphogenesis


id: GO:0050511
description: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050511
golevel: 6
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0050511_Undecaprenyldiphospho-muramoylpentapeptide_beta-N-acetylglucosaminyltransferase_activity


id: GO:0050515
description: 4-(cytidine 5-diphospho)-2-C-methyl-D-erythritol kinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050515
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0050515_4-(cytidine_5-diphospho)-2-C-methyl-D-erythritol_kinase_activity


id: GO:0050518
description: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050518
golevel: 6
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0050518_2-C-methyl-D-erythritol_4-phosphate_cytidylyltransferase_activity


id: GO:0050566
description: asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050566
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0050566_asparaginyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0050567
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050567
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0050567_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0051075
description: S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051075
golevel: 3
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0051075_S-adenosylmethionine:tRNA_ribosyltransferase-isomerase_activity


id: GO:0051172
description: Negative regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051172
golevel: 5
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0051172_Negative_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051173
description: Positive regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051173
golevel: 5
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0051173_Positive_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051240
description: Positive regulation of multicellular organismal process
memo: https://amigo.geneontology.org/amigo/term/GO:0051240
golevel: 4
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0051240_Positive_regulation_of_multicellular_organismal_process


id: GO:0051703
description: Biological process involved in intraspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0051703
golevel: 1
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0051703_Biological_process_involved_in_intraspecies_interaction_between_organisms


id: GO:0051745
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051745
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0051745_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_reductase_activity


id: GO:0051748
description: UTP-monosaccharide-1-phosphate uridylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051748
golevel: 6
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0051748_UTP-monosaccharide-1-phosphate_uridylyltransferase_activity


id: GO:0051991
memo: https://amigo.geneontology.org/amigo/term/GO:0051991
golevel: 6
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0051991_UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol_4-beta-N-acetylglucosaminlytransferase_activity

description:
  UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity


id: GO:0051992
memo: https://amigo.geneontology.org/amigo/term/GO:0051992
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0051992_UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate_transferase_activity

description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity


id: GO:0052038
description: Modulation by symbiont of host intracellular transport
memo: https://amigo.geneontology.org/amigo/term/GO:0052038
golevel: 6
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0052038_Modulation_by_symbiont_of_host_intracellular_transport


id: GO:0052592
description: Oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0052592
golevel: 4
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0052592_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_with_an_iron-sulfur_protein_as_acceptor


id: GO:0052908
description: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052908
golevel: 9
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0052908_16S_rRNA_(adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase_activity


id: GO:0052929
description: ATP:3-cytidine-cytidine-tRNA adenylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052929
golevel: 6
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0052929_ATP:3-cytidine-cytidine-tRNA_adenylyltransferase_activity


id: GO:0055052
description: ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing
memo: https://amigo.geneontology.org/amigo/term/GO:0055052
golevel: 7
name:
  GOCC.STRING_v12.0_1635258_STRINGid_GO:0055052_ATP-binding_cassette_(ABC)_transporter_complex,_substrate-binding_subunit-containing


id: GO:0055086
description: Nucleobase-containing small molecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0055086
golevel: 3
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0055086_Nucleobase-containing_small_molecule_metabolic_process


id: GO:0061695
description: Transferase complex, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0061695
golevel: 4
name:
  GOCC.STRING_v12.0_1635258_STRINGid_GO:0061695_Transferase_complex,_transferring_phosphorus-containing_groups


id: GO:0070626
memo: https://amigo.geneontology.org/amigo/term/GO:0070626
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0070626_(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)_succinate_lyase_(fumarate-forming)_activity

description:
  (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity


id: GO:0070647
description: Protein modification by small protein conjugation or removal
memo: https://amigo.geneontology.org/amigo/term/GO:0070647
golevel: 6
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0070647_Protein_modification_by_small_protein_conjugation_or_removal


id: GO:0071951
description: Conversion of methionyl-tRNA to N-formyl-methionyl-tRNA
memo: https://amigo.geneontology.org/amigo/term/GO:0071951
golevel: 12
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0071951_Conversion_of_methionyl-tRNA_to_N-formyl-methionyl-tRNA


id: GO:0072599
description: Establishment of protein localization to endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0072599
golevel: 7
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0072599_Establishment_of_protein_localization_to_endoplasmic_reticulum


id: GO:0097171
description: ADP-L-glycero-beta-D-manno-heptose biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0097171
golevel: 8
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0097171_ADP-L-glycero-beta-D-manno-heptose_biosynthetic_process


id: GO:0097588
description: Archaeal or bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:0097588
golevel: 4
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0097588_Archaeal_or_bacterial-type_flagellum-dependent_cell_motility


id: GO:0102027
description: S-adenosylmethionine:2-demethylquinol-8 methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102027
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0102027_S-adenosylmethionine:2-demethylquinol-8_methyltransferase_activity


id: GO:0102094
description: S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102094
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0102094_S-adenosylmethionine:2-demethylmenaquinol_methyltransferase_activity


id: GO:0102552
description: Lipoyl synthase activity (acting on glycine-cleavage complex H protein
memo: https://amigo.geneontology.org/amigo/term/GO:0102552
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0102552_Lipoyl_synthase_activity_(acting_on_glycine-cleavage_complex_H_protein


id: GO:0102553
description: Lipoyl synthase activity (acting on pyruvate dehydrogenase E2 protein)
memo: https://amigo.geneontology.org/amigo/term/GO:0102553
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0102553_Lipoyl_synthase_activity_(acting_on_pyruvate_dehydrogenase_E2_protein)


id: GO:0102752
memo: https://amigo.geneontology.org/amigo/term/GO:0102752
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0102752_1,4-alpha-glucan_branching_enzyme_activity_(using_a_glucosylated_glycogenin_as_primer_for_glycogen_synthesis)

description:
  1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis)


id: GO:0102955
description: S-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102955
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0102955_S-adenosylmethionine:2-demethylmenaquinol-7_methyltransferase_activity


id: GO:0106074
description: aminoacyl-tRNA metabolism involved in translational fidelity
memo: https://amigo.geneontology.org/amigo/term/GO:0106074
golevel: 9
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:0106074_aminoacyl-tRNA_metabolism_involved_in_translational_fidelity


id: GO:0140078
description: Class I DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0140078
golevel: 5
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:0140078_Class_I_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:1900191
description: Negative regulation of single-species biofilm formation
memo: https://amigo.geneontology.org/amigo/term/GO:1900191
golevel: 7
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:1900191_Negative_regulation_of_single-species_biofilm_formation


id: GO:1901505
description: Carbohydrate derivative transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:1901505
golevel: 3
name:
  GOMF.STRING_v12.0_1635258_STRINGid_GO:1901505_Carbohydrate_derivative_transmembrane_transporter_activity


id: GO:1901800
description: Positive regulation of proteasomal protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1901800
golevel: 9
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:1901800_Positive_regulation_of_proteasomal_protein_catabolic_process


id: GO:1902021
description: Regulation of bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:1902021
golevel: 6
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:1902021_Regulation_of_bacterial-type_flagellum-dependent_cell_motility


id: GO:1902201
description: Negative regulation of bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:1902201
golevel: 7
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:1902201_Negative_regulation_of_bacterial-type_flagellum-dependent_cell_motility


id: GO:1902221
description: Erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1902221
golevel: 8
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:1902221_Erythrose_4-phosphate/phosphoenolpyruvate_family_amino_acid_metabolic_process


id: GO:1902223
description: Erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:1902223
golevel: 9
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:1902223_Erythrose_4-phosphate/phosphoenolpyruvate_family_amino_acid_biosynthetic_process


id: GO:1902533
description: Positive regulation of intracellular signal transduction
memo: https://amigo.geneontology.org/amigo/term/GO:1902533
golevel: 7
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:1902533_Positive_regulation_of_intracellular_signal_transduction


id: GO:1903050
description: Regulation of proteolysis involved in protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1903050
golevel: 7
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:1903050_Regulation_of_proteolysis_involved_in_protein_catabolic_process


id: GO:1903052
description: Positive regulation of proteolysis involved in protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1903052
golevel: 8
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:1903052_Positive_regulation_of_proteolysis_involved_in_protein_catabolic_process


id: GO:1903507
description: Negative regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903507
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:1903507_Negative_regulation_of_nucleic_acid-templated_transcription


id: GO:1903508
description: Positive regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903508
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:1903508_Positive_regulation_of_nucleic_acid-templated_transcription


id: GO:1904951
description: Positive regulation of establishment of protein localization
memo: https://amigo.geneontology.org/amigo/term/GO:1904951
golevel: 7
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:1904951_Positive_regulation_of_establishment_of_protein_localization


id: GO:2000112
description: Regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000112
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:2000112_Regulation_of_cellular_macromolecule_biosynthetic_process


id: GO:2000113
description: Negative regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000113
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:2000113_Negative_regulation_of_cellular_macromolecule_biosynthetic_process


id: GO:2001060
description: D-glycero-D-manno-heptose 7-phosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:2001060
golevel: 5
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:2001060_D-glycero-D-manno-heptose_7-phosphate_metabolic_process


id: GO:2001061
description: D-glycero-D-manno-heptose 7-phosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2001061
golevel: 6
name:
  GOBP.STRING_v12.0_1635258_STRINGid_GO:2001061_D-glycero-D-manno-heptose_7-phosphate_biosynthetic_process


id: GOCC:0000015
description: Phosphopyruvate hydratase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000015
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0000015_Phosphopyruvate_hydratase_complex


id: GOCC:0000408
description: EKC/KEOPS complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000408
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0000408_EKC/KEOPS_complex


id: GOCC:0000428
description: DNA-directed RNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000428
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0000428_DNA-directed_RNA_polymerase_complex


id: GOCC:0000502
description: Proteasome complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000502
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0000502_Proteasome_complex


id: GOCC:0000930
description: Gamma-tubulin complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000930
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0000930_Gamma-tubulin_complex


id: GOCC:0000931
description: Gamma-tubulin large complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000931
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0000931_Gamma-tubulin_large_complex


id: GOCC:0002189
description: Ribose phosphate diphosphokinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0002189
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0002189_Ribose_phosphate_diphosphokinase_complex


id: GOCC:0005576
description: Extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0005576
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0005576_Extracellular_region


id: GOCC:0005604
description: Basement membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005604
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0005604_Basement_membrane


id: GOCC:0005615
description: Extracellular space
memo: https://amigo.geneontology.org/amigo/term/GO:0005615
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0005615_Extracellular_space


id: GOCC:0005740
description: Mitochondrial envelope
memo: https://amigo.geneontology.org/amigo/term/GO:0005740
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0005740_Mitochondrial_envelope


id: GOCC:0005743
description: Mitochondrial inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005743
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0005743_Mitochondrial_inner_membrane


id: GOCC:0005746
description: Mitochondrial respirasome
memo: https://amigo.geneontology.org/amigo/term/GO:0005746
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0005746_Mitochondrial_respirasome


id: GOCC:0005747
description: Mitochondrial respiratory chain complex I
memo: https://amigo.geneontology.org/amigo/term/GO:0005747
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0005747_Mitochondrial_respiratory_chain_complex_I


id: GOCC:0005759
description: Mitochondrial matrix
memo: https://amigo.geneontology.org/amigo/term/GO:0005759
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0005759_Mitochondrial_matrix


id: GOCC:0005783
description: Endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0005783
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0005783_Endoplasmic_reticulum


id: GOCC:0005788
description: Endoplasmic reticulum lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0005788
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0005788_Endoplasmic_reticulum_lumen


id: GOCC:0005789
description: Endoplasmic reticulum membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005789
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0005789_Endoplasmic_reticulum_membrane


id: GOCC:0005791
description: Rough endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0005791
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0005791_Rough_endoplasmic_reticulum


id: GOCC:0005798
description: Golgi-associated vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0005798
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0005798_Golgi-associated_vesicle


id: GOCC:0005815
description: Microtubule organizing center
memo: https://amigo.geneontology.org/amigo/term/GO:0005815
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0005815_Microtubule_organizing_center


id: GOCC:0005835
description: Fatty acid synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005835
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0005835_Fatty_acid_synthase_complex


id: GOCC:0005839
description: Proteasome core complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005839
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0005839_Proteasome_core_complex


id: GOCC:0005847
description: mRNA cleavage and polyadenylation specificity factor complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005847
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0005847_mRNA_cleavage_and_polyadenylation_specificity_factor_complex


id: GOCC:0005849
description: mRNA cleavage factor complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005849
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0005849_mRNA_cleavage_factor_complex


id: GOCC:0005875
description: Microtubule associated complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005875
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0005875_Microtubule_associated_complex


id: GOCC:0005882
description: Intermediate filament
memo: https://amigo.geneontology.org/amigo/term/GO:0005882
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0005882_Intermediate_filament


id: GOCC:0005887
description: Integral component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005887
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0005887_Integral_component_of_plasma_membrane


id: GOCC:0005911
description: Cell-cell junction
memo: https://amigo.geneontology.org/amigo/term/GO:0005911
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0005911_Cell-cell_junction


id: GOCC:0005945
description: 6-phosphofructokinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005945
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0005945_6-phosphofructokinase_complex


id: GOCC:0005948
description: Acetolactate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005948
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0005948_Acetolactate_synthase_complex


id: GOCC:0005951
description: Carbamoyl-phosphate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005951
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0005951_Carbamoyl-phosphate_synthase_complex


id: GOCC:0005960
description: Glycine cleavage complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005960
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0005960_Glycine_cleavage_complex


id: GOCC:0005971
description: Ribonucleoside-diphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005971
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0005971_Ribonucleoside-diphosphate_reductase_complex


id: GOCC:0008023
description: Transcription elongation factor complex
memo: https://amigo.geneontology.org/amigo/term/GO:0008023
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0008023_Transcription_elongation_factor_complex


id: GOCC:0008076
description: Voltage-gated potassium channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0008076
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0008076_Voltage-gated_potassium_channel_complex


id: GOCC:0009279
description: Cell outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009279
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009279_Cell_outer_membrane


id: GOCC:0009288
description: Bacterial-type flagellum
memo: https://amigo.geneontology.org/amigo/term/GO:0009288
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009288_Bacterial-type_flagellum


id: GOCC:0009316
description: 3-isopropylmalate dehydratase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009316
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009316_3-isopropylmalate_dehydratase_complex


id: GOCC:0009317
description: acetyl-CoA carboxylase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009317
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009317_acetyl-CoA_carboxylase_complex


id: GOCC:0009318
description: Exodeoxyribonuclease VII complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009318
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009318_Exodeoxyribonuclease_VII_complex


id: GOCC:0009325
description: Nitrate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009325
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009325_Nitrate_reductase_complex


id: GOCC:0009326
description: Formate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009326
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009326_Formate_dehydrogenase_complex


id: GOCC:0009328
description: phenylalanine-tRNA ligase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009328
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009328_phenylalanine-tRNA_ligase_complex


id: GOCC:0009330
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009330
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009330_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_complex


id: GOCC:0009331
description: glycerol-3-phosphate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009331
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009331_glycerol-3-phosphate_dehydrogenase_complex


id: GOCC:0009336
description: Sulfate adenylyltransferase complex (ATP)
memo: https://amigo.geneontology.org/amigo/term/GO:0009336
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009336_Sulfate_adenylyltransferase_complex_(ATP)


id: GOCC:0009337
description: Sulfite reductase complex (NADPH)
memo: https://amigo.geneontology.org/amigo/term/GO:0009337
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009337_Sulfite_reductase_complex_(NADPH)


id: GOCC:0009338
description: Exodeoxyribonuclease V complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009338
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009338_Exodeoxyribonuclease_V_complex


id: GOCC:0009339
description: Glycolate oxidase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009339
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009339_Glycolate_oxidase_complex


id: GOCC:0009341
description: Beta-galactosidase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009341
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009341_Beta-galactosidase_complex


id: GOCC:0009345
description: glycine-tRNA ligase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009345
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009345_glycine-tRNA_ligase_complex


id: GOCC:0009347
description: Aspartate carbamoyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009347
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009347_Aspartate_carbamoyltransferase_complex


id: GOCC:0009349
description: Riboflavin synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009349
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009349_Riboflavin_synthase_complex


id: GOCC:0009360
description: DNA polymerase III complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009360
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009360_DNA_polymerase_III_complex


id: GOCC:0009361
description: succinate-CoA ligase complex (ADP-forming)
memo: https://amigo.geneontology.org/amigo/term/GO:0009361
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009361_succinate-CoA_ligase_complex_(ADP-forming)


id: GOCC:0009368
description: Endopeptidase Clp complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009368
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009368_Endopeptidase_Clp_complex


id: GOCC:0009375
description: Ferredoxin hydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009375
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009375_Ferredoxin_hydrogenase_complex


id: GOCC:0009376
description: HslUV protease complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009376
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009376_HslUV_protease_complex


id: GOCC:0009379
description: Holliday junction helicase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009379
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009379_Holliday_junction_helicase_complex


id: GOCC:0009380
description: Excinuclease repair complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009380
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009380_Excinuclease_repair_complex


id: GOCC:0009382
description: Imidazoleglycerol-phosphate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009382
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009382_Imidazoleglycerol-phosphate_synthase_complex


id: GOCC:0009420
description: Bacterial-type flagellum filament
memo: https://amigo.geneontology.org/amigo/term/GO:0009420
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009420_Bacterial-type_flagellum_filament


id: GOCC:0009421
description: Bacterial-type flagellum filament cap
memo: https://amigo.geneontology.org/amigo/term/GO:0009421
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009421_Bacterial-type_flagellum_filament_cap


id: GOCC:0009424
description: Bacterial-type flagellum hook
memo: https://amigo.geneontology.org/amigo/term/GO:0009424
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009424_Bacterial-type_flagellum_hook


id: GOCC:0009425
description: Bacterial-type flagellum basal body
memo: https://amigo.geneontology.org/amigo/term/GO:0009425
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009425_Bacterial-type_flagellum_basal_body


id: GOCC:0009426
description: Bacterial-type flagellum basal body, distal rod
memo: https://amigo.geneontology.org/amigo/term/GO:0009426
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009426_Bacterial-type_flagellum_basal_body,_distal_rod


id: GOCC:0009427
description: Bacterial-type flagellum basal body, distal rod, L ring
memo: https://amigo.geneontology.org/amigo/term/GO:0009427
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009427_Bacterial-type_flagellum_basal_body,_distal_rod,_L_ring


id: GOCC:0009428
description: Bacterial-type flagellum basal body, distal rod, P ring
memo: https://amigo.geneontology.org/amigo/term/GO:0009428
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009428_Bacterial-type_flagellum_basal_body,_distal_rod,_P_ring


id: GOCC:0009431
description: Bacterial-type flagellum basal body, MS ring
memo: https://amigo.geneontology.org/amigo/term/GO:0009431
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009431_Bacterial-type_flagellum_basal_body,_MS_ring


id: GOCC:0009528
description: Plastid inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009528
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009528_Plastid_inner_membrane


id: GOCC:0009570
description: Chloroplast stroma
memo: https://amigo.geneontology.org/amigo/term/GO:0009570
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009570_Chloroplast_stroma


id: GOCC:0009706
description: Chloroplast inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009706
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009706_Chloroplast_inner_membrane


id: GOCC:0009897
description: External side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009897
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009897_External_side_of_plasma_membrane


id: GOCC:0009898
description: Cytoplasmic side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009898
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009898_Cytoplasmic_side_of_plasma_membrane


id: GOCC:0009941
description: Chloroplast envelope
memo: https://amigo.geneontology.org/amigo/term/GO:0009941
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0009941_Chloroplast_envelope


id: GOCC:0010008
description: Endosome membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0010008
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0010008_Endosome_membrane


id: GOCC:0012505
description: Endomembrane system
memo: https://amigo.geneontology.org/amigo/term/GO:0012505
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0012505_Endomembrane_system


id: GOCC:0012507
description: ER to Golgi transport vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0012507
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0012507_ER_to_Golgi_transport_vesicle_membrane


id: GOCC:0015627
description: Type II protein secretion system complex
memo: https://amigo.geneontology.org/amigo/term/GO:0015627
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0015627_Type_II_protein_secretion_system_complex


id: GOCC:0015630
description: Microtubule cytoskeleton
memo: https://amigo.geneontology.org/amigo/term/GO:0015630
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0015630_Microtubule_cytoskeleton


id: GOCC:0015934
description: Large ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0015934
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0015934_Large_ribosomal_subunit


id: GOCC:0015935
description: Small ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0015935
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0015935_Small_ribosomal_subunit


id: GOCC:0016021
description: Integral component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0016021
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0016021_Integral_component_of_membrane


id: GOCC:0016465
description: Chaperonin ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016465
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0016465_Chaperonin_ATPase_complex


id: GOCC:0016469
description: Proton-transporting two-sector ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016469
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0016469_Proton-transporting_two-sector_ATPase_complex


id: GOCC:0018995
description: Host cellular component
memo: https://amigo.geneontology.org/amigo/term/GO:0018995
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0018995_Host_cellular_component


id: GOCC:0019008
description: Molybdopterin synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0019008
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0019008_Molybdopterin_synthase_complex


id: GOCC:0019812
description: Type I site-specific deoxyribonuclease complex
memo: https://amigo.geneontology.org/amigo/term/GO:0019812
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0019812_Type_I_site-specific_deoxyribonuclease_complex


id: GOCC:0019866
description: Organelle inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019866
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0019866_Organelle_inner_membrane


id: GOCC:0019897
description: Extrinsic component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019897
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0019897_Extrinsic_component_of_plasma_membrane


id: GOCC:0019898
description: Extrinsic component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019898
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0019898_Extrinsic_component_of_membrane


id: GOCC:0022625
description: Cytosolic large ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0022625
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0022625_Cytosolic_large_ribosomal_subunit


id: GOCC:0022626
description: Cytosolic ribosome
memo: https://amigo.geneontology.org/amigo/term/GO:0022626
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0022626_Cytosolic_ribosome


id: GOCC:0022627
description: Cytosolic small ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0022627
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0022627_Cytosolic_small_ribosomal_subunit


id: GOCC:0030076
description: Light-harvesting complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030076
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0030076_Light-harvesting_complex


id: GOCC:0030077
description: Plasma membrane light-harvesting complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030077
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0030077_Plasma_membrane_light-harvesting_complex


id: GOCC:0030127
description: COPII vesicle coat
memo: https://amigo.geneontology.org/amigo/term/GO:0030127
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0030127_COPII_vesicle_coat


id: GOCC:0030133
description: Transport vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0030133
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0030133_Transport_vesicle


id: GOCC:0030134
description: COPII-coated ER to Golgi transport vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0030134
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0030134_COPII-coated_ER_to_Golgi_transport_vesicle


id: GOCC:0030257
description: Type III protein secretion system complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030257
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0030257_Type_III_protein_secretion_system_complex


id: GOCC:0030288
description: Outer membrane-bounded periplasmic space
memo: https://amigo.geneontology.org/amigo/term/GO:0030288
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0030288_Outer_membrane-bounded_periplasmic_space


id: GOCC:0030312
description: External encapsulating structure
memo: https://amigo.geneontology.org/amigo/term/GO:0030312
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0030312_External_encapsulating_structure


id: GOCC:0030658
description: Transport vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030658
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0030658_Transport_vesicle_membrane


id: GOCC:0030659
description: Cytoplasmic vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030659
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0030659_Cytoplasmic_vesicle_membrane


id: GOCC:0030660
description: Golgi-associated vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030660
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0030660_Golgi-associated_vesicle_membrane


id: GOCC:0030662
description: Coated vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030662
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0030662_Coated_vesicle_membrane


id: GOCC:0030694
description: Bacterial-type flagellum basal body, rod
memo: https://amigo.geneontology.org/amigo/term/GO:0030694
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0030694_Bacterial-type_flagellum_basal_body,_rod


id: GOCC:0030880
description: RNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030880
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0030880_RNA_polymerase_complex


id: GOCC:0030956
description: glutamyl-tRNA(Gln) amidotransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030956
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0030956_glutamyl-tRNA(Gln)_amidotransferase_complex


id: GOCC:0030964
description: NADH dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030964
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0030964_NADH_dehydrogenase_complex


id: GOCC:0031012
description: Extracellular matrix
memo: https://amigo.geneontology.org/amigo/term/GO:0031012
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0031012_Extracellular_matrix


id: GOCC:0031090
description: Organelle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031090
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0031090_Organelle_membrane


id: GOCC:0031224
description: Intrinsic component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031224
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0031224_Intrinsic_component_of_membrane


id: GOCC:0031225
description: Anchored component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031225
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0031225_Anchored_component_of_membrane


id: GOCC:0031226
description: Intrinsic component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031226
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0031226_Intrinsic_component_of_plasma_membrane


id: GOCC:0031230
description: Intrinsic component of cell outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031230
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0031230_Intrinsic_component_of_cell_outer_membrane


id: GOCC:0031233
description: Intrinsic component of external side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031233
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0031233_Intrinsic_component_of_external_side_of_plasma_membrane


id: GOCC:0031234
description: Extrinsic component of cytoplasmic side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031234
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0031234_Extrinsic_component_of_cytoplasmic_side_of_plasma_membrane


id: GOCC:0031235
description: Intrinsic component of the cytoplasmic side of the plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031235
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0031235_Intrinsic_component_of_the_cytoplasmic_side_of_the_plasma_membrane


id: GOCC:0031248
description: Protein acetyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031248
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0031248_Protein_acetyltransferase_complex


id: GOCC:0031250
description: Anaerobic ribonucleoside-triphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031250
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0031250_Anaerobic_ribonucleoside-triphosphate_reductase_complex


id: GOCC:0031300
description: Intrinsic component of organelle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031300
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0031300_Intrinsic_component_of_organelle_membrane


id: GOCC:0031301
description: Integral component of organelle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031301
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0031301_Integral_component_of_organelle_membrane


id: GOCC:0031304
description: Intrinsic component of mitochondrial inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031304
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0031304_Intrinsic_component_of_mitochondrial_inner_membrane


id: GOCC:0031305
description: Integral component of mitochondrial inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031305
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0031305_Integral_component_of_mitochondrial_inner_membrane


id: GOCC:0031410
description: Cytoplasmic vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0031410
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0031410_Cytoplasmic_vesicle


id: GOCC:0031414
description: N-terminal protein acetyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031414
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0031414_N-terminal_protein_acetyltransferase_complex


id: GOCC:0031469
description: Polyhedral organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0031469
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0031469_Polyhedral_organelle


id: GOCC:0031515
description: tRNA (m1A) methyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031515
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0031515_tRNA_(m1A)_methyltransferase_complex


id: GOCC:0031522
description: Cell envelope Sec protein transport complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031522
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0031522_Cell_envelope_Sec_protein_transport_complex


id: GOCC:0031588
description: Nucleotide-activated protein kinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031588
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0031588_Nucleotide-activated_protein_kinase_complex


id: GOCC:0031597
description: Cytosolic proteasome complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031597
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0031597_Cytosolic_proteasome_complex


id: GOCC:0031901
description: Early endosome membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031901
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0031901_Early_endosome_membrane


id: GOCC:0031966
description: Mitochondrial membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031966
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0031966_Mitochondrial_membrane


id: GOCC:0031967
description: Organelle envelope
memo: https://amigo.geneontology.org/amigo/term/GO:0031967
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0031967_Organelle_envelope


id: GOCC:0031969
description: Chloroplast membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031969
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0031969_Chloroplast_membrane


id: GOCC:0031974
description: Membrane-enclosed lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0031974
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0031974_Membrane-enclosed_lumen


id: GOCC:0031984
description: Organelle subcompartment
memo: https://amigo.geneontology.org/amigo/term/GO:0031984
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0031984_Organelle_subcompartment


id: GOCC:0032153
description: Cell division site
memo: https://amigo.geneontology.org/amigo/term/GO:0032153
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0032153_Cell_division_site


id: GOCC:0032299
description: Ribonuclease H2 complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032299
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0032299_Ribonuclease_H2_complex


id: GOCC:0032300
description: Mismatch repair complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032300
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0032300_Mismatch_repair_complex


id: GOCC:0032592
description: Integral component of mitochondrial membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0032592
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0032592_Integral_component_of_mitochondrial_membrane


id: GOCC:0032991
description: Protein-containing complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032991
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0032991_Protein-containing_complex


id: GOCC:0032993
description: protein-DNA complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032993
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0032993_protein-DNA_complex


id: GOCC:0033104
description: Type VI protein secretion system complex
memo: https://amigo.geneontology.org/amigo/term/GO:0033104
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0033104_Type_VI_protein_secretion_system_complex


id: GOCC:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GOCC:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GOCC:0033202
description: DNA helicase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0033202
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0033202_DNA_helicase_complex


id: GOCC:0033281
description: TAT protein transport complex
memo: https://amigo.geneontology.org/amigo/term/GO:0033281
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0033281_TAT_protein_transport_complex


id: GOCC:0033588
description: Elongator holoenzyme complex
memo: https://amigo.geneontology.org/amigo/term/GO:0033588
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0033588_Elongator_holoenzyme_complex


id: GOCC:0034357
description: Photosynthetic membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0034357
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0034357_Photosynthetic_membrane


id: GOCC:0034702
description: Ion channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034702
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0034702_Ion_channel_complex


id: GOCC:0034703
description: Cation channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034703
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0034703_Cation_channel_complex


id: GOCC:0034705
description: Potassium channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034705
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0034705_Potassium_channel_complex


id: GOCC:0034707
description: Chloride channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034707
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0034707_Chloride_channel_complex


id: GOCC:0034708
description: Methyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034708
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0034708_Methyltransferase_complex


id: GOCC:0036477
description: Somatodendritic compartment
memo: https://amigo.geneontology.org/amigo/term/GO:0036477
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0036477_Somatodendritic_compartment


id: GOCC:0042175
description: Nuclear outer membrane-endoplasmic reticulum membrane network
memo: https://amigo.geneontology.org/amigo/term/GO:0042175
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0042175_Nuclear_outer_membrane-endoplasmic_reticulum_membrane_network


id: GOCC:0042575
description: DNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0042575
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0042575_DNA_polymerase_complex


id: GOCC:0042597
description: Periplasmic space
memo: https://amigo.geneontology.org/amigo/term/GO:0042597
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0042597_Periplasmic_space


id: GOCC:0042601
description: Endospore-forming forespore
memo: https://amigo.geneontology.org/amigo/term/GO:0042601
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0042601_Endospore-forming_forespore


id: GOCC:0042651
description: Thylakoid membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0042651
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0042651_Thylakoid_membrane


id: GOCC:0042709
description: succinate-CoA ligase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0042709
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0042709_succinate-CoA_ligase_complex


id: GOCC:0042716
description: Plasma membrane-derived chromatophore
memo: https://amigo.geneontology.org/amigo/term/GO:0042716
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0042716_Plasma_membrane-derived_chromatophore


id: GOCC:0042763
description: Intracellular immature spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042763
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0042763_Intracellular_immature_spore


id: GOCC:0042788
description: Polysomal ribosome
memo: https://amigo.geneontology.org/amigo/term/GO:0042788
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0042788_Polysomal_ribosome


id: GOCC:0043005
description: Neuron projection
memo: https://amigo.geneontology.org/amigo/term/GO:0043005
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0043005_Neuron_projection


id: GOCC:0043190
description: ATP-binding cassette (ABC) transporter complex
memo: https://amigo.geneontology.org/amigo/term/GO:0043190
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0043190_ATP-binding_cassette_(ABC)_transporter_complex


id: GOCC:0043227
description: Membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043227
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0043227_Membrane-bounded_organelle


id: GOCC:0043228
description: Non-membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043228
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0043228_Non-membrane-bounded_organelle


id: GOCC:0043229
description: Intracellular organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043229
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0043229_Intracellular_organelle


id: GOCC:0043230
description: Extracellular organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043230
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0043230_Extracellular_organelle


id: GOCC:0043231
description: Intracellular membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043231
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0043231_Intracellular_membrane-bounded_organelle


id: GOCC:0043232
description: Intracellular non-membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043232
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0043232_Intracellular_non-membrane-bounded_organelle


id: GOCC:0043527
description: tRNA methyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0043527
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0043527_tRNA_methyltransferase_complex


id: GOCC:0043590
description: Bacterial nucleoid
memo: https://amigo.geneontology.org/amigo/term/GO:0043590
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0043590_Bacterial_nucleoid


id: GOCC:0044391
description: Ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0044391
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0044391_Ribosomal_subunit


id: GOCC:0044815
description: DNA packaging complex
memo: https://amigo.geneontology.org/amigo/term/GO:0044815
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0044815_DNA_packaging_complex


id: GOCC:0045111
description: Intermediate filament cytoskeleton
memo: https://amigo.geneontology.org/amigo/term/GO:0045111
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0045111_Intermediate_filament_cytoskeleton


id: GOCC:0045239
description: Tricarboxylic acid cycle enzyme complex
memo: https://amigo.geneontology.org/amigo/term/GO:0045239
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0045239_Tricarboxylic_acid_cycle_enzyme_complex


id: GOCC:0045259
description: Proton-transporting ATP synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0045259
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0045259_Proton-transporting_ATP_synthase_complex


id: GOCC:0045261
description: Proton-transporting ATP synthase complex, catalytic core F(1)
memo: https://amigo.geneontology.org/amigo/term/GO:0045261
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0045261_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: GOCC:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GOCC:0045271
description: Respiratory chain complex I
memo: https://amigo.geneontology.org/amigo/term/GO:0045271
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0045271_Respiratory_chain_complex_I


id: GOCC:0045272
description: Plasma membrane respiratory chain complex I
memo: https://amigo.geneontology.org/amigo/term/GO:0045272
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0045272_Plasma_membrane_respiratory_chain_complex_I


id: GOCC:0045273
description: Respiratory chain complex II
memo: https://amigo.geneontology.org/amigo/term/GO:0045273
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0045273_Respiratory_chain_complex_II


id: GOCC:0045281
description: Succinate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0045281
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0045281_Succinate_dehydrogenase_complex


id: GOCC:0048476
description: Holliday junction resolvase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0048476
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0048476_Holliday_junction_resolvase_complex


id: GOCC:0048500
description: Signal recognition particle
memo: https://amigo.geneontology.org/amigo/term/GO:0048500
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0048500_Signal_recognition_particle


id: GOCC:0055052
description: ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing
memo: https://amigo.geneontology.org/amigo/term/GO:0055052
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0055052_ATP-binding_cassette_(ABC)_transporter_complex,_substrate-binding_subunit-containing


id: GOCC:0061695
description: Transferase complex, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0061695
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0061695_Transferase_complex,_transferring_phosphorus-containing_groups


id: GOCC:0062023
description: Collagen-containing extracellular matrix
memo: https://amigo.geneontology.org/amigo/term/GO:0062023
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0062023_Collagen-containing_extracellular_matrix


id: GOCC:0065010
description: Extracellular membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0065010
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0065010_Extracellular_membrane-bounded_organelle


id: GOCC:0070013
description: Intracellular organelle lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0070013
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0070013_Intracellular_organelle_lumen


id: GOCC:0070062
description: Extracellular exosome
memo: https://amigo.geneontology.org/amigo/term/GO:0070062
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0070062_Extracellular_exosome


id: GOCC:0070069
description: Cytochrome complex
memo: https://amigo.geneontology.org/amigo/term/GO:0070069
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0070069_Cytochrome_complex


id: GOCC:0070161
description: Anchoring junction
memo: https://amigo.geneontology.org/amigo/term/GO:0070161
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0070161_Anchoring_junction


id: GOCC:0070258
description: Inner membrane pellicle complex
memo: https://amigo.geneontology.org/amigo/term/GO:0070258
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0070258_Inner_membrane_pellicle_complex


id: GOCC:0070470
description: Plasma membrane respirasome
memo: https://amigo.geneontology.org/amigo/term/GO:0070470
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0070470_Plasma_membrane_respirasome


id: GOCC:0071513
description: Phosphopantothenoylcysteine decarboxylase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0071513
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0071513_Phosphopantothenoylcysteine_decarboxylase_complex


id: GOCC:0071575
description: Integral component of external side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0071575
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0071575_Integral_component_of_external_side_of_plasma_membrane


id: GOCC:0072669
description: tRNA-splicing ligase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0072669
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0072669_tRNA-splicing_ligase_complex


id: GOCC:0090734
description: Site of DNA damage
memo: https://amigo.geneontology.org/amigo/term/GO:0090734
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0090734_Site_of_DNA_damage


id: GOCC:0097708
description: Intracellular vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0097708
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0097708_Intracellular_vesicle


id: GOCC:0098533
description: ATPase dependent transmembrane transport complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098533
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0098533_ATPase_dependent_transmembrane_transport_complex


id: GOCC:0098561
description: Methyl accepting chemotaxis protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098561
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0098561_Methyl_accepting_chemotaxis_protein_complex


id: GOCC:0098562
description: Cytoplasmic side of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0098562
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0098562_Cytoplasmic_side_of_membrane


id: GOCC:0098567
description: Periplasmic side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0098567
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0098567_Periplasmic_side_of_plasma_membrane


id: GOCC:0098573
description: Intrinsic component of mitochondrial membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0098573
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0098573_Intrinsic_component_of_mitochondrial_membrane


id: GOCC:0098588
description: Bounding membrane of organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0098588
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0098588_Bounding_membrane_of_organelle


id: GOCC:0098636
description: Protein complex involved in cell adhesion
memo: https://amigo.geneontology.org/amigo/term/GO:0098636
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0098636_Protein_complex_involved_in_cell_adhesion


id: GOCC:0098796
description: Membrane protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098796
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0098796_Membrane_protein_complex


id: GOCC:0098797
description: Plasma membrane protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098797
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0098797_Plasma_membrane_protein_complex


id: GOCC:0098798
description: Mitochondrial protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098798
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0098798_Mitochondrial_protein_complex


id: GOCC:0098800
description: Inner mitochondrial membrane protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098800
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0098800_Inner_mitochondrial_membrane_protein_complex


id: GOCC:0098802
description: Plasma membrane signaling receptor complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098802
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1635258_STRINGid_GOCC:0098802_Plasma_membrane_signaling_receptor_complex


