# geneInfo

ensembl_gene_id: BIV60_00005
symbol: OIK17241.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00010
symbol: OIK17242.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: BIV60_00020
symbol: BIV60_00020
gene_biotype: protein_coding
description:
  Frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00025
symbol: OIK17244.1
gene_biotype: protein_coding
description:
  Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00040
symbol: BIV60_00040
gene_biotype: protein_coding
description:
  Guanine deaminase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00045
symbol: OIK17247.1
gene_biotype: protein_coding
description:
  Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00055
symbol: OIK17249.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0145 family.


ensembl_gene_id: BIV60_00060
symbol: OIK17250.1
gene_biotype: protein_coding
description:
  GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00065
symbol: OIK17251.1
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutT; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00075
symbol: OIK17253.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: BIV60_00080
symbol: OIK17254.1
gene_biotype: protein_coding
description:
  Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00095
symbol: OIK17257.1
gene_biotype: protein_coding
description:
  Sodium:solute symporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: BIV60_00105
symbol: OIK17284.1
gene_biotype: protein_coding
description:
  N-acyl-L-amino acid amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00125
symbol: OIK17262.1
gene_biotype: protein_coding
description:
  Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00140
symbol: OIK17265.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0597 family.


ensembl_gene_id: BIV60_00150
symbol: OIK17267.1
gene_biotype: protein_coding
description:
  Hydrolase glyoxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00155
symbol: OIK17268.1
gene_biotype: protein_coding
description:
  Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00165
symbol: OIK17270.1
gene_biotype: protein_coding
description:
  ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AAA ATPase family.


ensembl_gene_id: BIV60_00170
symbol: OIK17271.1
gene_biotype: protein_coding
description:
  Monoamine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00175
symbol: msrB
gene_biotype: protein_coding
description:
  Methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: BIV60_00185
symbol: OIK17274.1
gene_biotype: protein_coding
description:
  DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00195
symbol: BIV60_00195
gene_biotype: protein_coding
description:
  Hypothetical protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: BIV60_00200
symbol: OIK17276.1
gene_biotype: protein_coding
description:
  FMN-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00205
symbol: dapA
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: BIV60_00210
symbol: OIK17278.1
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CbiX; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00215
symbol: OIK17279.1
gene_biotype: protein_coding
description:
  uroporphyrinogen-III C-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00225
symbol: sat
gene_biotype: protein_coding
description:
  Sulfate adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sulfate adenylyltransferase family.


ensembl_gene_id: BIV60_00230
symbol: OIK17282.1
gene_biotype: protein_coding
description:
  Anion permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00235
symbol: cysH
gene_biotype: protein_coding
description:
  Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.


ensembl_gene_id: BIV60_00240
symbol: BIV60_00240
gene_biotype: protein_coding
description:
  Transcriptional regulator; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: BIV60_00250
symbol: OIK17163.1
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00255
symbol: OIK17230.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00270
symbol: OIK17166.1
gene_biotype: protein_coding
description:
  Transition state regulator Abh; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00285
symbol: OIK17169.1
gene_biotype: protein_coding
description:
  Spore germination protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00305
symbol: BIV60_00305
gene_biotype: protein_coding
description:
  Integrase; Frameshifted; incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00310
symbol: OIK17172.1
gene_biotype: protein_coding
description:
  IS110 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00330
symbol: BIV60_00330
gene_biotype: protein_coding
description:
  Spore gernimation protein GerB; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00345
symbol: OIK17177.1
gene_biotype: protein_coding
description:
  Damage-inducible protein DinB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00360
symbol: OIK17180.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00380
symbol: OIK17184.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: BIV60_00405
symbol: BIV60_00405
gene_biotype: protein_coding
description:
  GntR family transcriptional regulator; Frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00415
symbol: OIK17190.1
gene_biotype: protein_coding
description:
  Cytosine permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00430
symbol: OIK17192.1
gene_biotype: protein_coding
description:
  NAD(P)H:quinone oxidoreductase, type IV; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WrbA family.


ensembl_gene_id: BIV60_00435
symbol: dacB
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: BIV60_00440
symbol: OIK17234.1
gene_biotype: protein_coding
description:
  Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00450
symbol: OIK17195.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pirin family.


ensembl_gene_id: BIV60_00455
symbol: OIK17196.1
gene_biotype: protein_coding
description:
  Molecular chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00465
symbol: OIK17198.1
gene_biotype: protein_coding
description:
  Carboxylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00470
symbol: OIK17235.1
gene_biotype: protein_coding
description:
  Ring-cleaving dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00485
symbol: OIK17201.1
gene_biotype: protein_coding
description:
  Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00490
symbol: OIK17202.1
gene_biotype: protein_coding
description:
  MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00500
symbol: BIV60_00500
gene_biotype: protein_coding
description:
  DNA recombinase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00510
symbol: OIK17236.1
gene_biotype: protein_coding
description:
  Glyoxal reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00515
symbol: OIK17205.1
gene_biotype: protein_coding
description:
  MFS sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00555
symbol: OIK17213.1
gene_biotype: protein_coding
description:
  Sugar isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00565
symbol: OIK17215.1
gene_biotype: protein_coding
description:
  Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00570
symbol: azoR
gene_biotype: protein_coding
description:
  FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.


ensembl_gene_id: BIV60_00580
symbol: BIV60_00580
gene_biotype: protein_coding
description:
  Polyketide cyclase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00585
symbol: OIK17237.1
gene_biotype: protein_coding
description:
  MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00595
symbol: OIK17219.1
gene_biotype: protein_coding
description:
  Spore gernimation protein KB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00610
symbol: BIV60_00610
gene_biotype: protein_coding
description:
  Cation-efflux pump; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00620
symbol: OIK17222.1
gene_biotype: protein_coding
description:
  Iron permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00625
symbol: OIK17239.1
gene_biotype: protein_coding
description:
  Cation-efflux pump; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: BIV60_00630
symbol: OIK17240.1
gene_biotype: protein_coding
description:
  Iron-regulated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00640
symbol: OIK17224.1
gene_biotype: protein_coding
description:
  Cytosolic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00645
symbol: OIK17225.1
gene_biotype: protein_coding
description:
  N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00650
symbol: OIK17226.1
gene_biotype: protein_coding
description:
  Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00660
symbol: OIK17228.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: BIV60_00670
symbol: OIK17074.1
gene_biotype: protein_coding
description:
  Nitric-oxide reductase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00695
symbol: OIK17079.1
gene_biotype: protein_coding
description:
  FeS assembly SUF system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00700
symbol: OIK17080.1
gene_biotype: protein_coding
description:
  ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00705
symbol: OIK17081.1
gene_biotype: protein_coding
description:
  RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methyltransferase superfamily.


ensembl_gene_id: BIV60_00715
symbol: gpsB
gene_biotype: protein_coding
description:
  Cell division protein DivIVA; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation.


ensembl_gene_id: BIV60_00720
symbol: OIK17083.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0398 family.


ensembl_gene_id: BIV60_00740
symbol: OIK17087.1
gene_biotype: protein_coding
description:
  Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00745
symbol: OIK17153.1
gene_biotype: protein_coding
description:
  Heat-shock protein Hsp20; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: BIV60_00755
symbol: BIV60_00755
gene_biotype: protein_coding
description:
  Hypothetical protein; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00780
symbol: recU
gene_biotype: protein_coding
description:
  Holliday junction resolvase RecU; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family.


ensembl_gene_id: BIV60_00785
symbol: OIK17094.1
gene_biotype: protein_coding
description:
  Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00795
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: BIV60_00800
symbol: OIK17097.1
gene_biotype: protein_coding
description:
  DNA replication protein DnaD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00805
symbol: OIK17154.1
gene_biotype: protein_coding
description:
  Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00810
symbol: OIK17098.1
gene_biotype: protein_coding
description:
  Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00815
symbol: OIK17099.1
gene_biotype: protein_coding
description:
  DUF4264 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00830
symbol: panD
gene_biotype: protein_coding
description:
  Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: BIV60_00835
symbol: panC
gene_biotype: protein_coding
description:
  Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: BIV60_00840
symbol: panB
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: BIV60_00845
symbol: birA
gene_biotype: protein_coding
description:
  biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.


ensembl_gene_id: BIV60_00850
symbol: cca
gene_biotype: protein_coding
description:
  CCA tRNA nucleotidyltransferase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.


ensembl_gene_id: BIV60_00860
symbol: OIK17107.1
gene_biotype: protein_coding
description:
  Bacillithiol biosynthesis deacetylase BshB1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00870
symbol: dapB
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: BIV60_00875
symbol: OIK17110.1
gene_biotype: protein_coding
description:
  Nucleotide pyrophosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00885
symbol: OIK17112.1
gene_biotype: protein_coding
description:
  Zn-dependent protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00890
symbol: OIK17156.1
gene_biotype: protein_coding
description:
  Sporulation protein YpjB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00905
symbol: OIK17115.1
gene_biotype: protein_coding
description:
  Cytochrome b6; Electron transport protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00910
symbol: OIK17116.1
gene_biotype: protein_coding
description:
  Menaquinol-cytochrome C reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00920
symbol: OIK17118.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0302 family.


ensembl_gene_id: BIV60_00935
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: BIV60_00940
symbol: OIK17122.1
gene_biotype: protein_coding
description:
  Prephenate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00945
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: BIV60_00950
symbol: OIK17124.1
gene_biotype: protein_coding
description:
  Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis.


ensembl_gene_id: BIV60_00955
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: BIV60_00960
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: BIV60_00965
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: BIV60_00970
symbol: OIK17127.1
gene_biotype: protein_coding
description:
  Heptaprenyl diphosphate synthase component II; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: BIV60_00975
symbol: menG
gene_biotype: protein_coding
description:
  Bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).


ensembl_gene_id: BIV60_00980
symbol: OIK17129.1
gene_biotype: protein_coding
description:
  Heptaprenyl diphosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00985
symbol: mtrB
gene_biotype: protein_coding
description:
  Transcription attenuation protein MtrB; Required for transcription attenuation control in the Trp operon. This trans-acting factor seems to recognize a 10 bases nucleotide sequence in the Trp leader transcript causing transcription termination. Binds the leader RNA only in presence of L-tryptophan. Belongs to the MtrB family.


ensembl_gene_id: BIV60_00990
symbol: folE
gene_biotype: protein_coding
description:
  GTP cyclohydrolase I FolE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_00995
symbol: OIK17132.1
gene_biotype: protein_coding
description:
  DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: BIV60_01000
symbol: OIK17133.1
gene_biotype: protein_coding
description:
  Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.


ensembl_gene_id: BIV60_01020
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: BIV60_01025
symbol: der
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: BIV60_01035
symbol: OIK17140.1
gene_biotype: protein_coding
description:
  YpzI family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01040
symbol: OIK17141.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: BIV60_01050
symbol: OIK17143.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: BIV60_01070
symbol: OIK17158.1
gene_biotype: protein_coding
description:
  Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01080
symbol: OIK17147.1
gene_biotype: protein_coding
description:
  Aliphatic sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01090
symbol: BIV60_01090
gene_biotype: protein_coding
description:
  Phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating); Catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01095
symbol: OIK17148.1
gene_biotype: protein_coding
description:
  3-hexulose-6-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01105
symbol: fni
gene_biotype: protein_coding
description:
  6-phospho 3-hexuloisomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).


ensembl_gene_id: BIV60_01110
symbol: OIK17150.1
gene_biotype: protein_coding
description:
  30S ribosomal protein S1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01115
symbol: OIK17151.1
gene_biotype: protein_coding
description:
  1-acyl-sn-glycerol-3-phosphate acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01120
symbol: cmk
gene_biotype: protein_coding
description:
  Cytidylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01125
symbol: OIK17071.1
gene_biotype: protein_coding
description:
  Deaminase; Metallo-dependent hydrolase superfamily; deaminase with metallo-dependent hydrolase domain; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01130
symbol: OIK17052.1
gene_biotype: protein_coding
description:
  DUF4822 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01135
symbol: OIK17053.1
gene_biotype: protein_coding
description:
  Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01155
symbol: OIK17056.1
gene_biotype: protein_coding
description:
  Ethylammeline chlorohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01160
symbol: OIK17057.1
gene_biotype: protein_coding
description:
  Glutathione ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01165
symbol: OIK17058.1
gene_biotype: protein_coding
description:
  Deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01180
symbol: OIK17061.1
gene_biotype: protein_coding
description:
  Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01185
symbol: OIK17062.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: BIV60_01195
symbol: OIK17064.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01200
symbol: OIK17065.1
gene_biotype: protein_coding
description:
  Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01225
symbol: OIK17070.1
gene_biotype: protein_coding
description:
  Thiamine pyrophosphate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.


ensembl_gene_id: BIV60_01230
symbol: OIK17073.1
gene_biotype: protein_coding
description:
  Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01235
symbol: OIK16930.1
gene_biotype: protein_coding
description:
  Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01240
symbol: OIK16931.1
gene_biotype: protein_coding
description:
  Succinate dehydrogenase flavoprotein subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01245
symbol: OIK16932.1
gene_biotype: protein_coding
description:
  Succinate dehydrogenase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01260
symbol: OIK16934.1
gene_biotype: protein_coding
description:
  Helix-turn-helix transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01275
symbol: OIK16937.1
gene_biotype: protein_coding
description:
  Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01280
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: BIV60_01285
symbol: OIK16939.1
gene_biotype: protein_coding
description:
  Non-canonical purine NTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: BIV60_01290
symbol: OIK17047.1
gene_biotype: protein_coding
description:
  YfcE family phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01305
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: BIV60_01310
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: BIV60_01315
symbol: OIK16943.1
gene_biotype: protein_coding
description:
  ATP-dependent protease LonB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01320
symbol: lon
gene_biotype: protein_coding
description:
  Endopeptidase La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: BIV60_01325
symbol: engB
gene_biotype: protein_coding
description:
  YihA family ribosome biogenesis GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: BIV60_01335
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: BIV60_01340
symbol: OIK16948.1
gene_biotype: protein_coding
description:
  Cytochrome C assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01345
symbol: hemC
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: BIV60_01350
symbol: OIK16950.1
gene_biotype: protein_coding
description:
  uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: BIV60_01355
symbol: OIK16951.1
gene_biotype: protein_coding
description:
  Delta-aminolevulinic acid dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ALAD family.


ensembl_gene_id: BIV60_01360
symbol: hemL
gene_biotype: protein_coding
description:
  Glutamate-1-semialdehyde-2,1-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01365
symbol: OIK16953.1
gene_biotype: protein_coding
description:
  Stage VI sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01370
symbol: OIK16954.1
gene_biotype: protein_coding
description:
  Spore coat protein YsxE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01380
symbol: valS
gene_biotype: protein_coding
description:
  valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: BIV60_01385
symbol: OIK16957.1
gene_biotype: protein_coding
description:
  Bifunctional folylpolyglutamate synthase/dihydrofolate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: BIV60_01415
symbol: OIK16963.1
gene_biotype: protein_coding
description:
  Type II secretion system protein GspE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01420
symbol: OIK16964.1
gene_biotype: protein_coding
description:
  Type IV pili twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01425
symbol: OIK16965.1
gene_biotype: protein_coding
description:
  Type II secretion system protein F; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01435
symbol: OIK16967.1
gene_biotype: protein_coding
description:
  Prepilin peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01440
symbol: OIK16968.1
gene_biotype: protein_coding
description:
  Pilus assembly protein PilM; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01460
symbol: OIK16972.1
gene_biotype: protein_coding
description:
  Septum formation inhibitor Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: BIV60_01465
symbol: OIK16973.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0758 family.


ensembl_gene_id: BIV60_01470
symbol: OIK16974.1
gene_biotype: protein_coding
description:
  Rod shape-determining protein; Functions in MreBCD complex in some organisms; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01480
symbol: OIK16976.1
gene_biotype: protein_coding
description:
  Rod shape-determining protein MreD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01485
symbol: minC
gene_biotype: protein_coding
description:
  Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: BIV60_01490
symbol: OIK16978.1
gene_biotype: protein_coding
description:
  Septum site-determining protein MinD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01495
symbol: OIK17048.1
gene_biotype: protein_coding
description:
  Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01500
symbol: OIK16979.1
gene_biotype: protein_coding
description:
  Stage IV sporulation protein FB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01505
symbol: OIK16980.1
gene_biotype: protein_coding
description:
  Ribonuclease E/G; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01510
symbol: rplU
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: BIV60_01520
symbol: rpmA
gene_biotype: protein_coding
description:
  50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL27 family.


ensembl_gene_id: BIV60_01530
symbol: obg
gene_biotype: protein_coding
description:
  GTPase ObgE; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: BIV60_01535
symbol: OIK16986.1
gene_biotype: protein_coding
description:
  ACT domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0735 family.


ensembl_gene_id: BIV60_01540
symbol: pheA
gene_biotype: protein_coding
description:
  Prephenate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01545
symbol: OIK16987.1
gene_biotype: protein_coding
description:
  Transcription repressor NadR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01550
symbol: OIK16988.1
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01560
symbol: OIK16990.1
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide diphosphorylase (carboxylating); Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NadC/ModD family.


ensembl_gene_id: BIV60_01565
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: BIV60_01575
symbol: OIK17050.1
gene_biotype: protein_coding
description:
  Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01585
symbol: OIK16994.1
gene_biotype: protein_coding
description:
  Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01590
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: BIV60_01595
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: BIV60_01605
symbol: queA
gene_biotype: protein_coding
description:
  tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: BIV60_01610
symbol: tgt
gene_biotype: protein_coding
description:
  tRNA guanosine(34) transglycosylase Tgt; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose t [...]


ensembl_gene_id: BIV60_01615
symbol: OIK17000.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit YajC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01625
symbol: OIK17002.1
gene_biotype: protein_coding
description:
  Stage V sporulation protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01630
symbol: OIK17003.1
gene_biotype: protein_coding
description:
  Post-transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01635
symbol: secD
gene_biotype: protein_coding
description:
  Protein translocase subunit SecDF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.


ensembl_gene_id: BIV60_01640
symbol: OIK17005.1
gene_biotype: protein_coding
description:
  single-stranded-DNA-specific exonuclease RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01645
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: BIV60_01650
symbol: OIK17007.1
gene_biotype: protein_coding
description:
  (p)ppGpp synthetase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: BIV60_01655
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: BIV60_01665
symbol: hisS
gene_biotype: protein_coding
description:
  histidine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01670
symbol: aspS
gene_biotype: protein_coding
description:
  aspartate--tRNA ligase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: BIV60_01680
symbol: OIK17012.1
gene_biotype: protein_coding
description:
  tRNA threonylcarbamoyladenosine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01685
symbol: OIK17013.1
gene_biotype: protein_coding
description:
  Proline dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01690
symbol: OIK17014.1
gene_biotype: protein_coding
description:
  Bacitracin ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01700
symbol: OIK17016.1
gene_biotype: protein_coding
description:
  Recombinase RarA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01710
symbol: OIK17018.1
gene_biotype: protein_coding
description:
  Cysteine desulfurase NifS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01715
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA 2-thiouridine(34) synthase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: BIV60_01725
symbol: recD2
gene_biotype: protein_coding
description:
  Hypothetical protein; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.


ensembl_gene_id: BIV60_01730
symbol: OIK17022.1
gene_biotype: protein_coding
description:
  Photosystem reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01740
symbol: OIK17024.1
gene_biotype: protein_coding
description:
  AI-2E family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01750
symbol: alaS
gene_biotype: protein_coding
description:
  alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: BIV60_01755
symbol: OIK17027.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0297 family.


ensembl_gene_id: BIV60_01760
symbol: OIK17028.1
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvA; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: BIV60_01765
symbol: OIK17029.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0473 family.


ensembl_gene_id: BIV60_01770
symbol: mltG
gene_biotype: protein_coding
description:
  Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.


ensembl_gene_id: BIV60_01775
symbol: OIK17030.1
gene_biotype: protein_coding
description:
  SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01780
symbol: OIK17031.1
gene_biotype: protein_coding
description:
  Peptidase U32; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01785
symbol: OIK17032.1
gene_biotype: protein_coding
description:
  Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01790
symbol: udk
gene_biotype: protein_coding
description:
  Uridine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01795
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: BIV60_01815
symbol: mtnN
gene_biotype: protein_coding
description:
  5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.


ensembl_gene_id: BIV60_01820
symbol: OIK17039.1
gene_biotype: protein_coding
description:
  Cysteine synthase A; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family.


ensembl_gene_id: BIV60_01825
symbol: OIK17040.1
gene_biotype: protein_coding
description:
  Catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01830
symbol: OIK17041.1
gene_biotype: protein_coding
description:
  Sporulation sigma factor SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: BIV60_01840
symbol: OIK17043.1
gene_biotype: protein_coding
description:
  Oligoendopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01845
symbol: OIK17044.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--serine O-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: BIV60_01850
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: BIV60_01855
symbol: OIK16899.1
gene_biotype: protein_coding
description:
  Alanine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01860
symbol: OIK16900.1
gene_biotype: protein_coding
description:
  Universal stress protein UspA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal stress protein A family.


ensembl_gene_id: BIV60_01870
symbol: OIK16902.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family.


ensembl_gene_id: BIV60_01880
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: BIV60_01890
symbol: tpx
gene_biotype: protein_coding
description:
  Lipid hydroperoxide peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.


ensembl_gene_id: BIV60_01895
symbol: OIK16907.1
gene_biotype: protein_coding
description:
  Sporulation protein YtfJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01910
symbol: OIK16910.1
gene_biotype: protein_coding
description:
  Signal peptide peptidase SppA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01915
symbol: nadK
gene_biotype: protein_coding
description:
  NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: BIV60_01925
symbol: OIK16913.1
gene_biotype: protein_coding
description:
  acyl--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01930
symbol: OIK16914.1
gene_biotype: protein_coding
description:
  Spore protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01935
symbol: thiI
gene_biotype: protein_coding
description:
  tRNA 4-thiouridine(8) synthase ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.


ensembl_gene_id: BIV60_01945
symbol: ezrA
gene_biotype: protein_coding
description:
  Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.


ensembl_gene_id: BIV60_01950
symbol: OIK16918.1
gene_biotype: protein_coding
description:
  TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01960
symbol: OIK16920.1
gene_biotype: protein_coding
description:
  Methionine gamma-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01965
symbol: OIK16921.1
gene_biotype: protein_coding
description:
  GGDEF domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01970
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: BIV60_01975
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: BIV60_01980
symbol: OIK16924.1
gene_biotype: protein_coding
description:
  Peptidoglycan glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01985
symbol: OIK16925.1
gene_biotype: protein_coding
description:
  acetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_01990
symbol: OIK16926.1
gene_biotype: protein_coding
description:
  N-acetyltransferase; Part of the acuABC operon, which is possibly involved in the breakdown of acetoin and butanediol. Acts as an acetyltransferase inactivating acetyl-CoA synthetase AcsA via acetylation at a Lys residue.


ensembl_gene_id: BIV60_01995
symbol: OIK16927.1
gene_biotype: protein_coding
description:
  Acetoin utilization protein AcuB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02000
symbol: OIK16928.1
gene_biotype: protein_coding
description:
  Acetoin utilization protein AcuC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02005
symbol: OIK16929.1
gene_biotype: protein_coding
description:
  Catabolite control protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02035
symbol: OIK16819.1
gene_biotype: protein_coding
description:
  Antibiotic biosynthesis monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02070
symbol: OIK16825.1
gene_biotype: protein_coding
description:
  Rubrerythrin family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02080
symbol: BIV60_02080
gene_biotype: protein_coding
description:
  Hypothetical protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02085
symbol: rnj
gene_biotype: protein_coding
description:
  Ribonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Bacterial RNase J subfamily.


ensembl_gene_id: BIV60_02090
symbol: OIK16828.1
gene_biotype: protein_coding
description:
  Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02100
symbol: OIK16830.1
gene_biotype: protein_coding
description:
  3-hydroxybenzoate 6-hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02105
symbol: OIK16831.1
gene_biotype: protein_coding
description:
  2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02120
symbol: OIK16834.1
gene_biotype: protein_coding
description:
  Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02125
symbol: OIK16835.1
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02130
symbol: OIK16836.1
gene_biotype: protein_coding
description:
  Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02150
symbol: OIK16840.1
gene_biotype: protein_coding
description:
  Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the alkaline phosphatase family.


ensembl_gene_id: BIV60_02160
symbol: folD
gene_biotype: protein_coding
description:
  Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: BIV60_02165
symbol: OIK16843.1
gene_biotype: protein_coding
description:
  Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02170
symbol: OIK16844.1
gene_biotype: protein_coding
description:
  NADPH-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02180
symbol: OIK16846.1
gene_biotype: protein_coding
description:
  MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02185
symbol: OIK16847.1
gene_biotype: protein_coding
description:
  Agmatinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family.


ensembl_gene_id: BIV60_02195
symbol: OIK16849.1
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: BIV60_02210
symbol: OIK16892.1
gene_biotype: protein_coding
description:
  5'-nucleotidase, lipoprotein e(P4) family; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02235
symbol: OIK16855.1
gene_biotype: protein_coding
description:
  Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02245
symbol: OIK16857.1
gene_biotype: protein_coding
description:
  Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02250
symbol: OIK16858.1
gene_biotype: protein_coding
description:
  Putrescine importer PuuP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02260
symbol: OIK16860.1
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02265
symbol: OIK16861.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0178 family.


ensembl_gene_id: BIV60_02295
symbol: OIK16867.1
gene_biotype: protein_coding
description:
  DeoR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02300
symbol: OIK16893.1
gene_biotype: protein_coding
description:
  Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02315
symbol: BIV60_02315
gene_biotype: protein_coding
description:
  Hypothetical protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02345
symbol: OIK16873.1
gene_biotype: protein_coding
description:
  Thiaminase II; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family.


ensembl_gene_id: BIV60_02350
symbol: OIK16895.1
gene_biotype: protein_coding
description:
  ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02355
symbol: OIK16874.1
gene_biotype: protein_coding
description:
  ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02360
symbol: OIK16875.1
gene_biotype: protein_coding
description:
  Thiamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02385
symbol: OIK16896.1
gene_biotype: protein_coding
description:
  Fatty acid desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02405
symbol: OIK16882.1
gene_biotype: protein_coding
description:
  RNA-binding protein S1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02440
symbol: BIV60_02440
gene_biotype: protein_coding
description:
  DNA mismatch repair protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02445
symbol: OIK16887.1
gene_biotype: protein_coding
description:
  Stage V sporulation protein S; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02575
symbol: OIK16770.1
gene_biotype: protein_coding
description:
  SprT family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SprT family.


ensembl_gene_id: BIV60_02580
symbol: OIK16771.1
gene_biotype: protein_coding
description:
  RNA-binding transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02590
symbol: OIK16773.1
gene_biotype: protein_coding
description:
  Antitoxin endoai; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02595
symbol: OIK16774.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: BIV60_02600
symbol: OIK16775.1
gene_biotype: protein_coding
description:
  DUF4367 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02605
symbol: acpS
gene_biotype: protein_coding
description:
  holo-ACP synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: BIV60_02610
symbol: OIK16777.1
gene_biotype: protein_coding
description:
  Rhomboid family intramembrane serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02635
symbol: cshA
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase; DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA-dependent ATPase activity; Belongs to the DEAD box helicase family. CshA subfamily.


ensembl_gene_id: BIV60_02645
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: BIV60_02650
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase A; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: BIV60_02660
symbol: OIK16787.1
gene_biotype: protein_coding
description:
  Rod shape-determining protein RodA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.


ensembl_gene_id: BIV60_02670
symbol: OIK16789.1
gene_biotype: protein_coding
description:
  QacE family quaternary ammonium compound efflux SMR transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02680
symbol: OIK16815.1
gene_biotype: protein_coding
description:
  Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02685
symbol: OIK16791.1
gene_biotype: protein_coding
description:
  Cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: BIV60_02690
symbol: OIK16792.1
gene_biotype: protein_coding
description:
  Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02695
symbol: argS
gene_biotype: protein_coding
description:
  arginine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02705
symbol: OIK16795.1
gene_biotype: protein_coding
description:
  Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02730
symbol: OIK16800.1
gene_biotype: protein_coding
description:
  GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02735
symbol: OIK16801.1
gene_biotype: protein_coding
description:
  Acid phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02740
symbol: OIK16802.1
gene_biotype: protein_coding
description:
  Cation acetate symporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: BIV60_02750
symbol: glsA
gene_biotype: protein_coding
description:
  Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutaminase family.


ensembl_gene_id: BIV60_02770
symbol: glmS
gene_biotype: protein_coding
description:
  Glutamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: BIV60_02775
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: BIV60_02785
symbol: dacA
gene_biotype: protein_coding
description:
  TIGR00159 family protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria; Belongs to the adenylate cyclase family. DacA/CdaA subfamily.


ensembl_gene_id: BIV60_02790
symbol: OIK16812.1
gene_biotype: protein_coding
description:
  Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02795
symbol: OIK16813.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor SigW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: BIV60_02800
symbol: OIK16814.1
gene_biotype: protein_coding
description:
  Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family.


ensembl_gene_id: BIV60_02860
symbol: purD
gene_biotype: protein_coding
description:
  Phosphoribosylamine--glycine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GARS family.


ensembl_gene_id: BIV60_02865
symbol: purH
gene_biotype: protein_coding
description:
  Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02870
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: BIV60_02875
symbol: purM
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine cyclo-ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02880
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: BIV60_02885
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase II; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist  [...]


ensembl_gene_id: BIV60_02890
symbol: purQ
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]


ensembl_gene_id: BIV60_02895
symbol: purS
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase subunit PurS; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought  [...]


ensembl_gene_id: BIV60_02900
symbol: purC
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazolesuccinocarboxamide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SAICAR synthetase family.


ensembl_gene_id: BIV60_02905
symbol: OIK16765.1
gene_biotype: protein_coding
description:
  Adenylosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.


ensembl_gene_id: BIV60_02910
symbol: purK
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: BIV60_02915
symbol: purE
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: BIV60_02925
symbol: OIK16769.1
gene_biotype: protein_coding
description:
  DUF2179 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02935
symbol: lysS
gene_biotype: protein_coding
description:
  lysine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: BIV60_02940
symbol: OIK16704.1
gene_biotype: protein_coding
description:
  tRNA dihydrouridine synthase DusB; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: BIV60_02950
symbol: OIK16752.1
gene_biotype: protein_coding
description:
  2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02955
symbol: OIK16706.1
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: BIV60_02960
symbol: OIK16707.1
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: BIV60_02970
symbol: OIK16709.1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_02975
symbol: hslO
gene_biotype: protein_coding
description:
  Hsp33 family molecular chaperone; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.


ensembl_gene_id: BIV60_02980
symbol: coaX
gene_biotype: protein_coding
description:
  Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: BIV60_02985
symbol: ftsH
gene_biotype: protein_coding
description:
  Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: BIV60_02990
symbol: OIK16713.1
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: BIV60_02995
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA lysidine(34) synthetase TilS; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: BIV60_03000
symbol: OIK16715.1
gene_biotype: protein_coding
description:
  Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03010
symbol: OIK16717.1
gene_biotype: protein_coding
description:
  Stage II sporulation protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03020
symbol: OIK16719.1
gene_biotype: protein_coding
description:
  Cell division protein DIVIC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03025
symbol: OIK16720.1
gene_biotype: protein_coding
description:
  Spore cortex biosynthesis protein YabQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03030
symbol: OIK16721.1
gene_biotype: protein_coding
description:
  Sporulation protein YabP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03040
symbol: OIK16723.1
gene_biotype: protein_coding
description:
  MazG family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03045
symbol: OIK16724.1
gene_biotype: protein_coding
description:
  Polysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03050
symbol: OIK16725.1
gene_biotype: protein_coding
description:
  Stage V sporulation protein T; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03055
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: BIV60_03065
symbol: pth
gene_biotype: protein_coding
description:
  aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: BIV60_03070
symbol: rplY
gene_biotype: protein_coding
description:
  50S ribosomal protein L25/general stress protein Ctc; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: BIV60_03075
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: BIV60_03080
symbol: glmU
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: BIV60_03085
symbol: spoVG
gene_biotype: protein_coding
description:
  Septation protein SpoVG; Essential for sporulation. Interferes with or is a negative regulator of the pathway leading to asymmetric septation.


ensembl_gene_id: BIV60_03090
symbol: OIK16731.1
gene_biotype: protein_coding
description:
  Reactive intermediate/imine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03095
symbol: OIK16732.1
gene_biotype: protein_coding
description:
  Pur operon repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03100
symbol: ispE
gene_biotype: protein_coding
description:
  4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: BIV60_03105
symbol: OIK16734.1
gene_biotype: protein_coding
description:
  Protein sspF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03115
symbol: OIK16736.1
gene_biotype: protein_coding
description:
  Sporulation peptidase YabG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03120
symbol: rsmA
gene_biotype: protein_coding
description:
  16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: BIV60_03125
symbol: rnmV
gene_biotype: protein_coding
description:
  Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.


ensembl_gene_id: BIV60_03135
symbol: OIK16755.1
gene_biotype: protein_coding
description:
  Hydrolase TatD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03140
symbol: metG
gene_biotype: protein_coding
description:
  methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: BIV60_03150
symbol: rsmI
gene_biotype: protein_coding
description:
  16S rRNA (cytidine(1402)-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: BIV60_03155
symbol: OIK16743.1
gene_biotype: protein_coding
description:
  Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03165
symbol: OIK16745.1
gene_biotype: protein_coding
description:
  DNA replication initiation control protein YabA; Involved in initiation control of chromosome replication. Belongs to the YabA family.


ensembl_gene_id: BIV60_03170
symbol: OIK16746.1
gene_biotype: protein_coding
description:
  Stage 0 sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03175
symbol: OIK16747.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03185
symbol: tmk
gene_biotype: protein_coding
description:
  dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: BIV60_03190
symbol: OIK16750.1
gene_biotype: protein_coding
description:
  Arginine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03195
symbol: OIK16751.1
gene_biotype: protein_coding
description:
  Sigma factor G inhibitor Gin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03210
symbol: hutH
gene_biotype: protein_coding
description:
  Urocanate hydratase; Catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: BIV60_03220
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: BIV60_03240
symbol: OIK16652.1
gene_biotype: protein_coding
description:
  Ktr system potassium uptake protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03245
symbol: OIK16653.1
gene_biotype: protein_coding
description:
  Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: BIV60_03250
symbol: OIK16654.1
gene_biotype: protein_coding
description:
  Elongation factor G; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03255
symbol: OIK16655.1
gene_biotype: protein_coding
description:
  Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03285
symbol: OIK16661.1
gene_biotype: protein_coding
description:
  RNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: BIV60_03305
symbol: OIK16696.1
gene_biotype: protein_coding
description:
  Spore gernimation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03320
symbol: OIK16698.1
gene_biotype: protein_coding
description:
  Spore gernimation protein GerC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03340
symbol: OIK16668.1
gene_biotype: protein_coding
description:
  Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03350
symbol: OIK16670.1
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03360
symbol: OIK16672.1
gene_biotype: protein_coding
description:
  Cytoplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03370
symbol: OIK16674.1
gene_biotype: protein_coding
description:
  Sulfoacetaldehyde acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.


ensembl_gene_id: BIV60_03375
symbol: OIK16675.1
gene_biotype: protein_coding
description:
  Alanine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AlaDH/PNT family.


ensembl_gene_id: BIV60_03380
symbol: OIK16676.1
gene_biotype: protein_coding
description:
  Aspartate aminotransferase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: BIV60_03420
symbol: OIK16684.1
gene_biotype: protein_coding
description:
  Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03435
symbol: OIK16687.1
gene_biotype: protein_coding
description:
  Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03455
symbol: BIV60_03455
gene_biotype: protein_coding
description:
  Endonuclease; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03480
symbol: OIK16695.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: BIV60_03485
symbol: OIK16641.1
gene_biotype: protein_coding
description:
  Amino acid oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03495
symbol: OIK16643.1
gene_biotype: protein_coding
description:
  Rieske (2Fe-2S) protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03500
symbol: OIK16648.1
gene_biotype: protein_coding
description:
  Ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03510
symbol: OIK16645.1
gene_biotype: protein_coding
description:
  L-lysine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03515
symbol: OIK16646.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03535
symbol: OIK16558.1
gene_biotype: protein_coding
description:
  5-formyltetrahydrofolate cyclo-ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.


ensembl_gene_id: BIV60_03540
symbol: rpmG
gene_biotype: protein_coding
description:
  50S ribosomal protein L33; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL33 family.


ensembl_gene_id: BIV60_03550
symbol: OIK16632.1
gene_biotype: protein_coding
description:
  Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03560
symbol: OIK16633.1
gene_biotype: protein_coding
description:
  Phosphate transport system regulatory protein PhoU; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03565
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: BIV60_03575
symbol: OIK16563.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, permease protein PstA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03580
symbol: OIK16564.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter permease subunit PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: BIV60_03585
symbol: OIK16565.1
gene_biotype: protein_coding
description:
  Phosphate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03610
symbol: OIK16569.1
gene_biotype: protein_coding
description:
  Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: BIV60_03625
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: BIV60_03635
symbol: OIK16574.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5'(3')-deoxyribonucleotidase family.


ensembl_gene_id: BIV60_03640
symbol: OIK16636.1
gene_biotype: protein_coding
description:
  Transcriptional repressor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family.


ensembl_gene_id: BIV60_03645
symbol: OIK16575.1
gene_biotype: protein_coding
description:
  Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03650
symbol: OIK16576.1
gene_biotype: protein_coding
description:
  Zinc ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03655
symbol: OIK16577.1
gene_biotype: protein_coding
description:
  tRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03660
symbol: nfo
gene_biotype: protein_coding
description:
  Deoxyribonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.


ensembl_gene_id: BIV60_03665
symbol: cshB
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures.


ensembl_gene_id: BIV60_03675
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: BIV60_03680
symbol: OIK16581.1
gene_biotype: protein_coding
description:
  Nif3-like dinuclear metal center hexameric protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.


ensembl_gene_id: BIV60_03695
symbol: OIK16583.1
gene_biotype: protein_coding
description:
  acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03700
symbol: sigA
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: BIV60_03705
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: BIV60_03715
symbol: BIV60_03715
gene_biotype: protein_coding
description:
  DUF188 domain-containing protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: BIV60_03720
symbol: OIK16587.1
gene_biotype: protein_coding
description:
  Transcriptional repressor CcpN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03725
symbol: glyQS
gene_biotype: protein_coding
description:
  glycine--tRNA ligase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: BIV60_03740
symbol: OIK16591.1
gene_biotype: protein_coding
description:
  YqzL family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03745
symbol: era
gene_biotype: protein_coding
description:
  GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: BIV60_03750
symbol: OIK16592.1
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: BIV60_03755
symbol: OIK16593.1
gene_biotype: protein_coding
description:
  Diacylglycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03760
symbol: ybeY
gene_biotype: protein_coding
description:
  rRNA maturation RNase YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: BIV60_03770
symbol: OIK16596.1
gene_biotype: protein_coding
description:
  Phosphate starvation-inducible protein PhoH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03775
symbol: OIK16597.1
gene_biotype: protein_coding
description:
  Sporulation protein YqfD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03780
symbol: OIK16598.1
gene_biotype: protein_coding
description:
  Sporulation protein YqfC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03795
symbol: OIK16601.1
gene_biotype: protein_coding
description:
  Nodulation efficiency protein NfeD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03805
symbol: rpsU
gene_biotype: protein_coding
description:
  30S ribosomal protein S21; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS21 family.


ensembl_gene_id: BIV60_03810
symbol: OIK16604.1
gene_biotype: protein_coding
description:
  Na/Pi cotransporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03815
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: BIV60_03820
symbol: OIK16606.1
gene_biotype: protein_coding
description:
  tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03825
symbol: OIK16607.1
gene_biotype: protein_coding
description:
  16S rRNA (uracil(1498)-N(3))-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: BIV60_03830
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: BIV60_03835
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: BIV60_03845
symbol: grpE
gene_biotype: protein_coding
description:
  Nucleotide exchange factor GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds [...]


ensembl_gene_id: BIV60_03850
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcriptional repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: BIV60_03855
symbol: OIK16612.1
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: BIV60_03860
symbol: lepA
gene_biotype: protein_coding
description:
  Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: BIV60_03870
symbol: gpr
gene_biotype: protein_coding
description:
  GPR endopeptidase; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.


ensembl_gene_id: BIV60_03885
symbol: OIK16618.1
gene_biotype: protein_coding
description:
  YqzM family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03890
symbol: OIK16619.1
gene_biotype: protein_coding
description:
  DNA internalization-related competence protein ComEC/Rec2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03895
symbol: OIK16620.1
gene_biotype: protein_coding
description:
  ComE operon protein 2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03905
symbol: proC
gene_biotype: protein_coding
description:
  Late competence protein ComER; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: BIV60_03910
symbol: OIK16623.1
gene_biotype: protein_coding
description:
  Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03915
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosome silencing factor; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: BIV60_03925
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinic acid mononucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: BIV60_03930
symbol: OIK16627.1
gene_biotype: protein_coding
description:
  RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03935
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: BIV60_03940
symbol: OIK16629.1
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase YqeH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03960
symbol: OIK16438.1
gene_biotype: protein_coding
description:
  Adenosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03965
symbol: OIK16439.1
gene_biotype: protein_coding
description:
  Lipoprotein YerB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03975
symbol: pcrB
gene_biotype: protein_coding
description:
  Geranylgeranylglyceryl/heptaprenylglyceryl phosphate synthase; Prenyltransferase that catalyzes in vivo the transfer of the heptaprenyl moiety of heptaprenyl pyrophosphate (HepPP; 35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond- formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales.


ensembl_gene_id: BIV60_03980
symbol: OIK16441.1
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase PcrA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_03985
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase (NAD(+)) LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: BIV60_03995
symbol: rocA
gene_biotype: protein_coding
description:
  L-glutamate gamma-semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. RocA subfamily.


ensembl_gene_id: BIV60_04020
symbol: OIK16448.1
gene_biotype: protein_coding
description:
  Siroheme synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04025
symbol: OIK16449.1
gene_biotype: protein_coding
description:
  Glycoside hydrolase family 15; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04030
symbol: OIK16450.1
gene_biotype: protein_coding
description:
  Malate synthase A; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the malate synthase family.


ensembl_gene_id: BIV60_04035
symbol: OIK16451.1
gene_biotype: protein_coding
description:
  Isocitrate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04070
symbol: gatC
gene_biotype: protein_coding
description:
  asparaginyl/glutamyl-tRNA amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: BIV60_04075
symbol: gatA
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: BIV60_04080
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: BIV60_04095
symbol: OIK16462.1
gene_biotype: protein_coding
description:
  Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: BIV60_04100
symbol: OIK16463.1
gene_biotype: protein_coding
description:
  Thioredoxin family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04105
symbol: plsY
gene_biotype: protein_coding
description:
  Acyl-phosphate glycerol 3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: BIV60_04120
symbol: OIK16467.1
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: BIV60_04135
symbol: OIK16470.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: BIV60_04145
symbol: OIK16472.1
gene_biotype: protein_coding
description:
  acyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04150
symbol: OIK16473.1
gene_biotype: protein_coding
description:
  LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: BIV60_04155
symbol: OIK16474.1
gene_biotype: protein_coding
description:
  23S rRNA (uracil-5-)-methyltransferase RumA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: BIV60_04215
symbol: OIK16546.1
gene_biotype: protein_coding
description:
  Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04220
symbol: OIK16486.1
gene_biotype: protein_coding
description:
  LytR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04225
symbol: OIK16487.1
gene_biotype: protein_coding
description:
  acetyl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04230
symbol: OIK16488.1
gene_biotype: protein_coding
description:
  Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: BIV60_04240
symbol: OIK16490.1
gene_biotype: protein_coding
description:
  Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04250
symbol: OIK16492.1
gene_biotype: protein_coding
description:
  PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04270
symbol: OIK16496.1
gene_biotype: protein_coding
description:
  Acetolactate synthase, large subunit, biosynthetic type; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04275
symbol: OIK16497.1
gene_biotype: protein_coding
description:
  IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04280
symbol: OIK16547.1
gene_biotype: protein_coding
description:
  Amidinotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04290
symbol: OIK16498.1
gene_biotype: protein_coding
description:
  FMN-binding glutamate synthase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate synthase family.


ensembl_gene_id: BIV60_04300
symbol: OIK16549.1
gene_biotype: protein_coding
description:
  Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04305
symbol: OIK16500.1
gene_biotype: protein_coding
description:
  PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04310
symbol: OIK16550.1
gene_biotype: protein_coding
description:
  Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04315
symbol: OIK16501.1
gene_biotype: protein_coding
description:
  LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04330
symbol: OIK16504.1
gene_biotype: protein_coding
description:
  Galactose ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04335
symbol: OIK16505.1
gene_biotype: protein_coding
description:
  Galactose/methyl galactoside ABC transporter ATP-binding protein MglA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04340
symbol: OIK16506.1
gene_biotype: protein_coding
description:
  Galactoside ABC transporter permease MglC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: BIV60_04365
symbol: OIK16510.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: BIV60_04375
symbol: OIK16512.1
gene_biotype: protein_coding
description:
  Ribonucleotide-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.


ensembl_gene_id: BIV60_04380
symbol: OIK16513.1
gene_biotype: protein_coding
description:
  Flavodoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04385
symbol: OIK16514.1
gene_biotype: protein_coding
description:
  L-cystine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: BIV60_04410
symbol: OIK16518.1
gene_biotype: protein_coding
description:
  Ethanolamine utilization protein EutJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04415
symbol: OIK16519.1
gene_biotype: protein_coding
description:
  Zn-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04435
symbol: BIV60_04435
gene_biotype: protein_coding
description:
  Divalent metal cation transporter; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04440
symbol: OIK16523.1
gene_biotype: protein_coding
description:
  acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: BIV60_04445
symbol: OIK16524.1
gene_biotype: protein_coding
description:
  beta-ketoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04450
symbol: OIK16553.1
gene_biotype: protein_coding
description:
  Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04465
symbol: OIK16527.1
gene_biotype: protein_coding
description:
  Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04470
symbol: OIK16528.1
gene_biotype: protein_coding
description:
  Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04505
symbol: OIK16534.1
gene_biotype: protein_coding
description:
  Lactose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04515
symbol: OIK16536.1
gene_biotype: protein_coding
description:
  Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04525
symbol: galK
gene_biotype: protein_coding
description:
  Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.


ensembl_gene_id: BIV60_04530
symbol: OIK16539.1
gene_biotype: protein_coding
description:
  UDP-glucose 4-epimerase GalE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family.


ensembl_gene_id: BIV60_04535
symbol: galT
gene_biotype: protein_coding
description:
  Galactose-1-phosphate uridylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04550
symbol: OIK16542.1
gene_biotype: protein_coding
description:
  Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04555
symbol: OIK16291.1
gene_biotype: protein_coding
description:
  Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.


ensembl_gene_id: BIV60_04560
symbol: OIK16292.1
gene_biotype: protein_coding
description:
  DUF421 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04565
symbol: OIK16293.1
gene_biotype: protein_coding
description:
  Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04575
symbol: OIK16295.1
gene_biotype: protein_coding
description:
  Glycine betaine/L-proline ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04580
symbol: OIK16296.1
gene_biotype: protein_coding
description:
  GbsR/MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GbsR family.


ensembl_gene_id: BIV60_04600
symbol: OIK16300.1
gene_biotype: protein_coding
description:
  RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: BIV60_04610
symbol: menC
gene_biotype: protein_coding
description:
  O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).


ensembl_gene_id: BIV60_04635
symbol: OIK16307.1
gene_biotype: protein_coding
description:
  NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04645
symbol: OIK16309.1
gene_biotype: protein_coding
description:
  Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04650
symbol: pxpA
gene_biotype: protein_coding
description:
  Lactam utilization protein LamB; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.


ensembl_gene_id: BIV60_04655
symbol: OIK16311.1
gene_biotype: protein_coding
description:
  Kinase inhibitor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04660
symbol: OIK16312.1
gene_biotype: protein_coding
description:
  KipI antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04665
symbol: OIK16313.1
gene_biotype: protein_coding
description:
  Protein xpaC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04670
symbol: OIK16314.1
gene_biotype: protein_coding
description:
  Toxic anion resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TelA family.


ensembl_gene_id: BIV60_04675
symbol: OIK16315.1
gene_biotype: protein_coding
description:
  Peptidase M15; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04680
symbol: OIK16316.1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 2-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: BIV60_04685
symbol: OIK16317.1
gene_biotype: protein_coding
description:
  Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04710
symbol: OIK16322.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the peptidase S8 family.


ensembl_gene_id: BIV60_04715
symbol: tagU
gene_biotype: protein_coding
description:
  LytR family transcriptional regulator; May catalyze the final step in cell wall teichoic acid biosynthesis, the transfer of the anionic cell wall polymers (APs) from their lipid-linked precursor to the cell wall peptidoglycan (PG).


ensembl_gene_id: BIV60_04720
symbol: OIK16324.1
gene_biotype: protein_coding
description:
  2',3'-cyclic-nucleotide 2'-phosphodiesterase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: BIV60_04735
symbol: BIV60_04735
gene_biotype: protein_coding
description:
  Ig domain-containing protein group 2 domain-containing protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04745
symbol: OIK16327.1
gene_biotype: protein_coding
description:
  Membrane-bound O-acyltransferase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane-bound acyltransferase family.


ensembl_gene_id: BIV60_04760
symbol: OIK16330.1
gene_biotype: protein_coding
description:
  Teichoic acid glycosylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04765
symbol: OIK16331.1
gene_biotype: protein_coding
description:
  Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04770
symbol: tarI
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the transfer of the cytidylyl group of CTP to D- ribitol 5-phosphate.


ensembl_gene_id: BIV60_04775
symbol: tarJ
gene_biotype: protein_coding
description:
  Ribitol-5-phosphate dehydrogenase; Catalyzes the NADPH dependent reduction of D-ribulose 5- phosphate to D-ribitol 5-phosphate; Belongs to the zinc-containing alcohol dehydrogenase family.


ensembl_gene_id: BIV60_04785
symbol: OIK16430.1
gene_biotype: protein_coding
description:
  CDP-glycerol--glycerophosphate glycerophosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04790
symbol: OIK16335.1
gene_biotype: protein_coding
description:
  Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04795
symbol: OIK16336.1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04805
symbol: OIK16337.1
gene_biotype: protein_coding
description:
  Teichoic acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04810
symbol: tagH
gene_biotype: protein_coding
description:
  Teichoic acid export protein ATP-binding subunit; Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system.


ensembl_gene_id: BIV60_04830
symbol: murJ
gene_biotype: protein_coding
description:
  Murein biosynthesis integral membrane protein MurJ; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: BIV60_04835
symbol: OIK16341.1
gene_biotype: protein_coding
description:
  Glycosyltransferase; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.


ensembl_gene_id: BIV60_04845
symbol: OIK16343.1
gene_biotype: protein_coding
description:
  Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04855
symbol: OIK16345.1
gene_biotype: protein_coding
description:
  YigZ family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04860
symbol: OIK16346.1
gene_biotype: protein_coding
description:
  Histidine kinase; Member of the two-component regulatory system DegS/DegU, which plays an important role in the transition growth phase.


ensembl_gene_id: BIV60_04880
symbol: OIK16350.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04890
symbol: OIK16352.1
gene_biotype: protein_coding
description:
  Fatty acid-binding protein DegV; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04895
symbol: OIK16353.1
gene_biotype: protein_coding
description:
  DNA/RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04900
symbol: OIK16354.1
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04905
symbol: OIK16355.1
gene_biotype: protein_coding
description:
  Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04910
symbol: hpf
gene_biotype: protein_coding
description:
  Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: BIV60_04920
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: BIV60_04925
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: BIV60_04935
symbol: OIK16361.1
gene_biotype: protein_coding
description:
  Cytochrome C551; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04940
symbol: ftsE
gene_biotype: protein_coding
description:
  Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: BIV60_04945
symbol: OIK16363.1
gene_biotype: protein_coding
description:
  Cell division protein FtsX; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: BIV60_04955
symbol: OIK16365.1
gene_biotype: protein_coding
description:
  Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family.


ensembl_gene_id: BIV60_04960
symbol: OIK16366.1
gene_biotype: protein_coding
description:
  PDZ serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04970
symbol: OIK16368.1
gene_biotype: protein_coding
description:
  Cadmium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04975
symbol: OIK16369.1
gene_biotype: protein_coding
description:
  Cation transporter; Involved in zinc efflux across the cytoplasmic membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04980
symbol: OIK16370.1
gene_biotype: protein_coding
description:
  Copper-translocating P-type ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_04995
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: BIV60_05000
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: BIV60_05005
symbol: OIK16375.1
gene_biotype: protein_coding
description:
  DUF4097 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05015
symbol: hprK
gene_biotype: protein_coding
description:
  HPr kinase/phosphorylase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon [...]


ensembl_gene_id: BIV60_05020
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: BIV60_05025
symbol: ppaX
gene_biotype: protein_coding
description:
  Pyrophosphatase PpaX; Hydrolyzes pyrophosphate formed during P-Ser-HPr dephosphorylation by HPrK/P. Might play a role in controlling the intracellular pyrophosphate pool.


ensembl_gene_id: BIV60_05030
symbol: OIK16380.1
gene_biotype: protein_coding
description:
  Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05035
symbol: hisZ
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase regulatory subunit; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.


ensembl_gene_id: BIV60_05040
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: BIV60_05045
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: BIV60_05050
symbol: hisB
gene_biotype: protein_coding
description:
  Imidazoleglycerol-phosphate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05055
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: BIV60_05060
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05065
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: BIV60_05070
symbol: hisI
gene_biotype: protein_coding
description:
  Bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; In the N-terminal section; belongs to the PRA-CH family.


ensembl_gene_id: BIV60_05075
symbol: OIK16389.1
gene_biotype: protein_coding
description:
  Tetratricopeptide repeat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05080
symbol: OIK16390.1
gene_biotype: protein_coding
description:
  Thioredoxin-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05095
symbol: OIK16392.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.


ensembl_gene_id: BIV60_05105
symbol: OIK16394.1
gene_biotype: protein_coding
description:
  Phosphocarrier protein Chr; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05110
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp endopeptidase, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: BIV60_05130
symbol: OIK16398.1
gene_biotype: protein_coding
description:
  DedA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05135
symbol: OIK16399.1
gene_biotype: protein_coding
description:
  Acriflavine resistance protein B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: BIV60_05140
symbol: OIK16400.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma-54 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05145
symbol: OIK16435.1
gene_biotype: protein_coding
description:
  NrdH-redoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05155
symbol: OIK16402.1
gene_biotype: protein_coding
description:
  Type I glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: BIV60_05160
symbol: pgk
gene_biotype: protein_coding
description:
  Phosphoglycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphoglycerate kinase family.


ensembl_gene_id: BIV60_05165
symbol: tpiA
gene_biotype: protein_coding
description:
  Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: BIV60_05170
symbol: gpmI
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase (2,3-diphosphoglycerate-independent); Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the BPG-independent phosphoglycerate mutase family.


ensembl_gene_id: BIV60_05175
symbol: eno
gene_biotype: protein_coding
description:
  Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: BIV60_05180
symbol: OIK16407.1
gene_biotype: protein_coding
description:
  Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05190
symbol: OIK16408.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: BIV60_05200
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: BIV60_05205
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: BIV60_05225
symbol: OIK16414.1
gene_biotype: protein_coding
description:
  Cytosine permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the purine-cytosine permease (2.A.39) family.


ensembl_gene_id: BIV60_05230
symbol: OIK16415.1
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05255
symbol: OIK16420.1
gene_biotype: protein_coding
description:
  Group-specific protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05260
symbol: OIK16421.1
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: BIV60_05280
symbol: nadE
gene_biotype: protein_coding
description:
  NAD(+) synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.


ensembl_gene_id: BIV60_05285
symbol: OIK16426.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: BIV60_05290
symbol: OIK16427.1
gene_biotype: protein_coding
description:
  Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05300
symbol: BIV60_05300
gene_biotype: protein_coding
description:
  tRNA-Arg; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05315
symbol: OIK16199.1
gene_biotype: protein_coding
description:
  2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05320
symbol: OIK16282.1
gene_biotype: protein_coding
description:
  Electron transfer flavoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05325
symbol: OIK16200.1
gene_biotype: protein_coding
description:
  Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: BIV60_05340
symbol: OIK16203.1
gene_biotype: protein_coding
description:
  Metal-dependent phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05375
symbol: OIK16210.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: BIV60_05385
symbol: OIK16283.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05395
symbol: OIK16212.1
gene_biotype: protein_coding
description:
  Glycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycerate kinase type-1 family.


ensembl_gene_id: BIV60_05400
symbol: OIK16213.1
gene_biotype: protein_coding
description:
  Radical SAM/CxCxxxxC motif protein YfkAB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05405
symbol: OIK16214.1
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05410
symbol: OIK16215.1
gene_biotype: protein_coding
description:
  Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05430
symbol: OIK16218.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the NiCoT transporter (TC 2.A.52) family.


ensembl_gene_id: BIV60_05445
symbol: OIK16221.1
gene_biotype: protein_coding
description:
  Hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: BIV60_05450
symbol: OIK16286.1
gene_biotype: protein_coding
description:
  GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05460
symbol: OIK16223.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05465
symbol: OIK16224.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05470
symbol: OIK16225.1
gene_biotype: protein_coding
description:
  Basic amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: BIV60_05485
symbol: OIK16227.1
gene_biotype: protein_coding
description:
  Ammonium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05495
symbol: OIK16229.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05500
symbol: ilvD
gene_biotype: protein_coding
description:
  Dihydroxy-acid dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IlvD/Edd family.


ensembl_gene_id: BIV60_05510
symbol: OIK16232.1
gene_biotype: protein_coding
description:
  Acetolactate synthase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05515
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: BIV60_05520
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: BIV60_05525
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: BIV60_05530
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: BIV60_05535
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: BIV60_05545
symbol: OIK16239.1
gene_biotype: protein_coding
description:
  Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05555
symbol: OIK16241.1
gene_biotype: protein_coding
description:
  Hemolysin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05590
symbol: OIK16247.1
gene_biotype: protein_coding
description:
  SET domain-containing protein-lysine N-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05625
symbol: OIK16289.1
gene_biotype: protein_coding
description:
  Glucohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05655
symbol: OIK16258.1
gene_biotype: protein_coding
description:
  NADH-dependent flavin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05685
symbol: OIK16264.1
gene_biotype: protein_coding
description:
  DUF2642 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05695
symbol: BIV60_05695
gene_biotype: protein_coding
description:
  Arsenic transporter; Frameshifted; internal stop; incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05710
symbol: OIK16268.1
gene_biotype: protein_coding
description:
  RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: BIV60_05725
symbol: OIK16271.1
gene_biotype: protein_coding
description:
  Biotin transporter BioY; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05730
symbol: OIK16272.1
gene_biotype: protein_coding
description:
  acyl-CoA synthetase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05760
symbol: OIK16278.1
gene_biotype: protein_coding
description:
  Glutamate:protein symporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: BIV60_05775
symbol: amj
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: BIV60_05785
symbol: OIK16153.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05790
symbol: OIK16191.1
gene_biotype: protein_coding
description:
  Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05800
symbol: OIK16192.1
gene_biotype: protein_coding
description:
  Bcr/CflA family drug resistance efflux transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05805
symbol: bioW
gene_biotype: protein_coding
description:
  6-carboxyhexanoate--CoA ligase; Catalyzes the transformation of pimelate into pimeloyl-CoA with concomitant hydrolysis of ATP to AMP.


ensembl_gene_id: BIV60_05810
symbol: bioA
gene_biotype: protein_coding
description:
  L-lysine--8-amino-7-oxononanoate transaminase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.


ensembl_gene_id: BIV60_05815
symbol: OIK16157.1
gene_biotype: protein_coding
description:
  8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.


ensembl_gene_id: BIV60_05820
symbol: bioD
gene_biotype: protein_coding
description:
  Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: BIV60_05825
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase BioB; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: BIV60_05830
symbol: OIK16159.1
gene_biotype: protein_coding
description:
  Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.


ensembl_gene_id: BIV60_05835
symbol: OIK16160.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein MoeB; Catalyzes the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD or ThiS in the molybdopterin or thiamin pyrophosphate biosynthesis pathways; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05840
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: BIV60_05845
symbol: OIK16162.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05850
symbol: OIK16163.1
gene_biotype: protein_coding
description:
  MBL fold metallo-hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05855
symbol: OIK16164.1
gene_biotype: protein_coding
description:
  Glycine oxidase ThiO; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05860
symbol: OIK16194.1
gene_biotype: protein_coding
description:
  16S rRNA (cytosine(1402)-N(4))-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05875
symbol: OIK16167.1
gene_biotype: protein_coding
description:
  Rhamnogalacturonan acetylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05900
symbol: BIV60_05900
gene_biotype: protein_coding
description:
  DNA-binding response regulator; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05910
symbol: OIK16173.1
gene_biotype: protein_coding
description:
  DUF4440 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05915
symbol: OIK16174.1
gene_biotype: protein_coding
description:
  Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05920
symbol: OIK16175.1
gene_biotype: protein_coding
description:
  Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05930
symbol: OIK16177.1
gene_biotype: protein_coding
description:
  Type I glutamate--ammonia ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_05975
symbol: OIK16186.1
gene_biotype: protein_coding
description:
  Cysteine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06055
symbol: OIK16028.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: BIV60_06065
symbol: livG
gene_biotype: protein_coding
description:
  Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06070
symbol: OIK16031.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06075
symbol: OIK16032.1
gene_biotype: protein_coding
description:
  aminoacyl-tRNA deacylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.


ensembl_gene_id: BIV60_06085
symbol: OIK16034.1
gene_biotype: protein_coding
description:
  DNA alkylation repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06090
symbol: OIK16035.1
gene_biotype: protein_coding
description:
  Quinoprotein glucose dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06110
symbol: OIK16039.1
gene_biotype: protein_coding
description:
  Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06135
symbol: BIV60_06135
gene_biotype: protein_coding
description:
  Recombinase; Frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06150
symbol: OIK16045.1
gene_biotype: protein_coding
description:
  Copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06160
symbol: OIK16047.1
gene_biotype: protein_coding
description:
  Nitrous-oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06170
symbol: OIK16049.1
gene_biotype: protein_coding
description:
  Bacillithiol biosynthesis deacetylase BshB2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06180
symbol: mobA
gene_biotype: protein_coding
description:
  Molybdenum cofactor guanylyltransferase; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.


ensembl_gene_id: BIV60_06185
symbol: OIK16051.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MoaE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06190
symbol: OIK16052.1
gene_biotype: protein_coding
description:
  Molybdopterin converting factor subunit 1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06210
symbol: OIK16056.1
gene_biotype: protein_coding
description:
  Spore coat protein GerQ; Essential for the localization of CwlJ in the spore coat and for spore germination triggered by calcium and dipicolinic acid (DPA). Its assembly into the spore coat is dependent on the coat morphogenetic proteins CotE and SpoIVA.


ensembl_gene_id: BIV60_06220
symbol: OIK16058.1
gene_biotype: protein_coding
description:
  Phosphate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06225
symbol: lipL
gene_biotype: protein_coding
description:
  Octanoyltransferase; Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes; Belongs to the octanoyltransferase LipL family.


ensembl_gene_id: BIV60_06230
symbol: OIK16060.1
gene_biotype: protein_coding
description:
  Prespore-specific transcriptional regulator RsfA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06235
symbol: OIK16061.1
gene_biotype: protein_coding
description:
  DUF1450 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0741 family.


ensembl_gene_id: BIV60_06250
symbol: OIK16064.1
gene_biotype: protein_coding
description:
  4-oxalocrotonate tautomerase; 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family.


ensembl_gene_id: BIV60_06255
symbol: OIK16065.1
gene_biotype: protein_coding
description:
  Site-2 protease family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06265
symbol: OIK16067.1
gene_biotype: protein_coding
description:
  Monofunctional biosynthetic peptidoglycan transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06270
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: BIV60_06290
symbol: sspH-2
gene_biotype: protein_coding
description:
  Small, acid-soluble spore protein, H family; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SspH family.


ensembl_gene_id: BIV60_06295
symbol: OIK16072.1
gene_biotype: protein_coding
description:
  HemX protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06300
symbol: OIK16073.1
gene_biotype: protein_coding
description:
  Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06305
symbol: OIK16074.1
gene_biotype: protein_coding
description:
  Cardiolipin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.


ensembl_gene_id: BIV60_06315
symbol: OIK16076.1
gene_biotype: protein_coding
description:
  acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: BIV60_06320
symbol: OIK16077.1
gene_biotype: protein_coding
description:
  3-hydroxybutyryl-CoA dehydrogenase; Converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06340
symbol: icmF
gene_biotype: protein_coding
description:
  methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.


ensembl_gene_id: BIV60_06350
symbol: rpoE
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family.


ensembl_gene_id: BIV60_06355
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: BIV60_06365
symbol: OIK16086.1
gene_biotype: protein_coding
description:
  Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06370
symbol: OIK16087.1
gene_biotype: protein_coding
description:
  Fructose-1,6-bisphosphate aldolase, class II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06375
symbol: tal
gene_biotype: protein_coding
description:
  Fructose-6-phosphate aldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: BIV60_06380
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: BIV60_06385
symbol: OIK16089.1
gene_biotype: protein_coding
description:
  Fructose-bisphosphatase, class II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06390
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: BIV60_06400
symbol: tdk
gene_biotype: protein_coding
description:
  Thymidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06410
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: BIV60_06415
symbol: prmC
gene_biotype: protein_coding
description:
  protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: BIV60_06420
symbol: OIK16096.1
gene_biotype: protein_coding
description:
  Stage II sporulation protein R; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06430
symbol: OIK16098.1
gene_biotype: protein_coding
description:
  threonylcarbamoyl-AMP synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: BIV60_06435
symbol: mntP
gene_biotype: protein_coding
description:
  Hypothetical protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.


ensembl_gene_id: BIV60_06440
symbol: OIK16100.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: BIV60_06445
symbol: OIK16101.1
gene_biotype: protein_coding
description:
  Ribose 5-phosphate isomerase B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06450
symbol: OIK16102.1
gene_biotype: protein_coding
description:
  TIGR01440 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0340 family.


ensembl_gene_id: BIV60_06455
symbol: glyA-2
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: BIV60_06460
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: BIV60_06465
symbol: OIK16105.1
gene_biotype: protein_coding
description:
  Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.


ensembl_gene_id: BIV60_06475
symbol: OIK16107.1
gene_biotype: protein_coding
description:
  ATP synthase subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06480
symbol: atpB
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: BIV60_06485
symbol: atpE
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: BIV60_06490
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase F0 subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: BIV60_06495
symbol: atpH
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: BIV60_06500
symbol: atpA
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: BIV60_06505
symbol: atpG
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: BIV60_06510
symbol: atpD
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: BIV60_06515
symbol: atpC
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: BIV60_06520
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: BIV60_06525
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: BIV60_06530
symbol: OIK16117.1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06535
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: BIV60_06540
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: BIV60_06545
symbol: OIK16120.1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06550
symbol: OIK16121.1
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: BIV60_06555
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: BIV60_06560
symbol: OIK16123.1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06565
symbol: OIK16124.1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06570
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: BIV60_06575
symbol: OIK16126.1
gene_biotype: protein_coding
description:
  CsbD family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family.


ensembl_gene_id: BIV60_06590
symbol: BIV60_06590
gene_biotype: protein_coding
description:
  Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06610
symbol: OIK16131.1
gene_biotype: protein_coding
description:
  Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06620
symbol: OIK16133.1
gene_biotype: protein_coding
description:
  DNA starvation/stationary phase protection protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family.


ensembl_gene_id: BIV60_06640
symbol: OIK16136.1
gene_biotype: protein_coding
description:
  Anti-anti sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family.


ensembl_gene_id: BIV60_06645
symbol: rsbW
gene_biotype: protein_coding
description:
  Anti-sigma B factor RsbW; Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B).


ensembl_gene_id: BIV60_06650
symbol: OIK16138.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: BIV60_06655
symbol: OIK16139.1
gene_biotype: protein_coding
description:
  Stress-induced protein, KGG, repeat-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06670
symbol: OIK16142.1
gene_biotype: protein_coding
description:
  General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06695
symbol: OIK16015.1
gene_biotype: protein_coding
description:
  Urease accessory protein UreI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06700
symbol: OIK16016.1
gene_biotype: protein_coding
description:
  Pyrimidine nucleoside transporter NupC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06705
symbol: OIK16017.1
gene_biotype: protein_coding
description:
  Anaerobic sulfatase maturase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06710
symbol: OIK16019.1
gene_biotype: protein_coding
description:
  Arylsulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06720
symbol: OIK15975.1
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06725
symbol: OIK15976.1
gene_biotype: protein_coding
description:
  4-aminobutyrate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: BIV60_06745
symbol: OIK15980.1
gene_biotype: protein_coding
description:
  Carbon-nitrogen hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06750
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: BIV60_06755
symbol: OIK15982.1
gene_biotype: protein_coding
description:
  TrmB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06760
symbol: deoD
gene_biotype: protein_coding
description:
  Purine-nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06775
symbol: OIK15986.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.


ensembl_gene_id: BIV60_06790
symbol: OIK15989.1
gene_biotype: protein_coding
description:
  Ethanolamine utilization protein EutN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06800
symbol: OIK15991.1
gene_biotype: protein_coding
description:
  Propanediol utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06805
symbol: OIK15992.1
gene_biotype: protein_coding
description:
  Ethanolamine utilization protein; involved in the degredation of ethanolamine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06810
symbol: OIK15993.1
gene_biotype: protein_coding
description:
  Acetaldehyde dehydrogenase (acetylating); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06815
symbol: OIK16011.1
gene_biotype: protein_coding
description:
  Carbon dioxide concentrating mechanism/carboxysome shell protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06820
symbol: phnX
gene_biotype: protein_coding
description:
  Phosphonoacetaldehyde hydrolase; Involved in phosphonate degradation; Belongs to the HAD-like hydrolase superfamily. PhnX family.


ensembl_gene_id: BIV60_06835
symbol: phnW
gene_biotype: protein_coding
description:
  2-aminoethylphosphonate--pyruvate transaminase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily.


ensembl_gene_id: BIV60_06840
symbol: OIK15998.1
gene_biotype: protein_coding
description:
  GABA permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06860
symbol: OIK16002.1
gene_biotype: protein_coding
description:
  Phosphonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06865
symbol: OIK16003.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.


ensembl_gene_id: BIV60_06870
symbol: mqo
gene_biotype: protein_coding
description:
  Malate:quinone oxidoreductase; Malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06905
symbol: OIK15962.1
gene_biotype: protein_coding
description:
  EBSC protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06915
symbol: OIK15964.1
gene_biotype: protein_coding
description:
  Cobalamin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06920
symbol: OIK15965.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06925
symbol: OIK15966.1
gene_biotype: protein_coding
description:
  MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.


ensembl_gene_id: BIV60_06955
symbol: BIV60_06955
gene_biotype: protein_coding
description:
  Ethanolamine utilization protein EutN; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06985
symbol: OIK15960.1
gene_biotype: protein_coding
description:
  Azaleucine resistance protein AzlC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06990
symbol: OIK15938.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid transporter AzlD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_06995
symbol: OIK15939.1
gene_biotype: protein_coding
description:
  Phenylacetate degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07010
symbol: BIV60_07010
gene_biotype: protein_coding
description:
  Two-component sensor histidine kinase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07030
symbol: OIK15944.1
gene_biotype: protein_coding
description:
  Asparagine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07055
symbol: OIK15948.1
gene_biotype: protein_coding
description:
  Spore photoproduct lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07060
symbol: OIK15949.1
gene_biotype: protein_coding
description:
  Transcriptional regulator SplA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07075
symbol: OIK15952.1
gene_biotype: protein_coding
description:
  UV damage endonuclease UvsE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07085
symbol: uvsE
gene_biotype: protein_coding
description:
  UV damage endonuclease UvsE; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07105
symbol: OIK15957.1
gene_biotype: protein_coding
description:
  Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07110
symbol: OIK15958.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07125
symbol: OIK15891.1
gene_biotype: protein_coding
description:
  PTS glucose transporter subunit IICBA; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07130
symbol: OIK15933.1
gene_biotype: protein_coding
description:
  Transcriptional antiterminator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07135
symbol: OIK15892.1
gene_biotype: protein_coding
description:
  Guanine permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07155
symbol: OIK15895.1
gene_biotype: protein_coding
description:
  AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07175
symbol: OIK15899.1
gene_biotype: protein_coding
description:
  Tartrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07185
symbol: OIK15901.1
gene_biotype: protein_coding
description:
  (2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07200
symbol: OIK15903.1
gene_biotype: protein_coding
description:
  propionyl-CoA--succinate CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07205
symbol: OIK15904.1
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07215
symbol: pqqE
gene_biotype: protein_coding
description:
  Pyrroloquinoline quinone biosynthesis protein PqqE; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).


ensembl_gene_id: BIV60_07220
symbol: OIK15936.1
gene_biotype: protein_coding
description:
  Pyrroloquinoline quinone biosynthesis protein PqqD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07225
symbol: pqqC
gene_biotype: protein_coding
description:
  Pyrroloquinoline quinone biosynthesis protein PqqC; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ.


ensembl_gene_id: BIV60_07230
symbol: pqqB
gene_biotype: protein_coding
description:
  Pyrroloquinoline quinone biosynthesis protein PqqB; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family.


ensembl_gene_id: BIV60_07260
symbol: BIV60_07260
gene_biotype: protein_coding
description:
  Hypothetical protein; Frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07265
symbol: OIK15914.1
gene_biotype: protein_coding
description:
  Hydantoinase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07285
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: BIV60_07290
symbol: groS
gene_biotype: protein_coding
description:
  Co-chaperone GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: BIV60_07295
symbol: OIK15920.1
gene_biotype: protein_coding
description:
  CAAX protease family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07325
symbol: rex
gene_biotype: protein_coding
description:
  Redox-sensing transcriptional repressor Rex; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: BIV60_07330
symbol: moaC
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: BIV60_07340
symbol: tsaD
gene_biotype: protein_coding
description:
  tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: BIV60_07345
symbol: OIK15930.1
gene_biotype: protein_coding
description:
  Ribosomal-protein-alanine N-acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.


ensembl_gene_id: BIV60_07350
symbol: OIK15931.1
gene_biotype: protein_coding
description:
  tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07355
symbol: OIK15932.1
gene_biotype: protein_coding
description:
  tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07375
symbol: OIK15787.1
gene_biotype: protein_coding
description:
  Pyridoxine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pyridoxine kinase family.


ensembl_gene_id: BIV60_07380
symbol: OIK15788.1
gene_biotype: protein_coding
description:
  ECF transporter S component; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07390
symbol: OIK15790.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid transporter AzlC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07395
symbol: OIK15791.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07400
symbol: lutC
gene_biotype: protein_coding
description:
  Lactate utilization protein C; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source.


ensembl_gene_id: BIV60_07405
symbol: lutB
gene_biotype: protein_coding
description:
  Iron-sulfur cluster-binding protein; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate.


ensembl_gene_id: BIV60_07410
symbol: lutA
gene_biotype: protein_coding
description:
  Fe-S oxidoreductase; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source.


ensembl_gene_id: BIV60_07450
symbol: OIK15801.1
gene_biotype: protein_coding
description:
  Daunorubicin resistance protein DrrC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07455
symbol: OIK15802.1
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: BIV60_07460
symbol: OIK15803.1
gene_biotype: protein_coding
description:
  DJ-1/PfpI family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07480
symbol: OIK15806.1
gene_biotype: protein_coding
description:
  Delta-lactam-biosynthetic de-N-acetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07495
symbol: OIK15809.1
gene_biotype: protein_coding
description:
  Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.


ensembl_gene_id: BIV60_07525
symbol: OIK15814.1
gene_biotype: protein_coding
description:
  Calcium/proton exchanger; Ca(+)/H(+) antiporter that extrudes calcium in exchange for external protons.


ensembl_gene_id: BIV60_07540
symbol: OIK15817.1
gene_biotype: protein_coding
description:
  Ribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0761 family.


ensembl_gene_id: BIV60_07550
symbol: OIK15819.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0435 family.


ensembl_gene_id: BIV60_07555
symbol: map
gene_biotype: protein_coding
description:
  Type I methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: BIV60_07565
symbol: OIK15822.1
gene_biotype: protein_coding
description:
  Sugar kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07585
symbol: hutH-2
gene_biotype: protein_coding
description:
  Histidine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07590
symbol: OIK15827.1
gene_biotype: protein_coding
description:
  Sigma-54-dependent Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07595
symbol: OIK15884.1
gene_biotype: protein_coding
description:
  Proline dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07615
symbol: topB
gene_biotype: protein_coding
description:
  DNA topoisomerase III; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA su [...]


ensembl_gene_id: BIV60_07640
symbol: mscL
gene_biotype: protein_coding
description:
  Mechanosensitive ion channel protein MscL; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: BIV60_07645
symbol: OIK15837.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BI1 family.


ensembl_gene_id: BIV60_07650
symbol: OIK15838.1
gene_biotype: protein_coding
description:
  Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07705
symbol: BIV60_07705
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07730
symbol: OIK15851.1
gene_biotype: protein_coding
description:
  Deferrochelatase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.


ensembl_gene_id: BIV60_07735
symbol: OIK15852.1
gene_biotype: protein_coding
description:
  Efem/EfeO family lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07750
symbol: OIK15854.1
gene_biotype: protein_coding
description:
  Cell wall-active antibiotics response protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07755
symbol: OIK15855.1
gene_biotype: protein_coding
description:
  Modulator protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07760
symbol: OIK15856.1
gene_biotype: protein_coding
description:
  Flagellar basal body rod protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07765
symbol: OIK15857.1
gene_biotype: protein_coding
description:
  Tellurite resistance methyltransferase TehB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07775
symbol: OIK15859.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: BIV60_07785
symbol: OIK15861.1
gene_biotype: protein_coding
description:
  Sulfur reduction protein DsrE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07795
symbol: OIK15863.1
gene_biotype: protein_coding
description:
  Rhodanese; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07835
symbol: OIK15870.1
gene_biotype: protein_coding
description:
  Cystathionine gamma-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07845
symbol: OIK15872.1
gene_biotype: protein_coding
description:
  Amidase; Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07850
symbol: OIK15873.1
gene_biotype: protein_coding
description:
  RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07905
symbol: BIV60_07905
gene_biotype: protein_coding
description:
  Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: BIV60_07925
symbol: OIK15680.1
gene_biotype: protein_coding
description:
  Nitronate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07930
symbol: OIK15681.1
gene_biotype: protein_coding
description:
  Thiol-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07935
symbol: OIK15773.1
gene_biotype: protein_coding
description:
  Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07945
symbol: OIK15683.1
gene_biotype: protein_coding
description:
  Autoinducer-2 kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07955
symbol: OIK15685.1
gene_biotype: protein_coding
description:
  Sugar isomerase; Catalyzes the conversion of a range of fructosamine 6- phosphates to glucose 6-phosphate and a free amino acid.


ensembl_gene_id: BIV60_07960
symbol: OIK15686.1
gene_biotype: protein_coding
description:
  Fructosamine deglycase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07980
symbol: OIK15689.1
gene_biotype: protein_coding
description:
  Fructoselysine 6-kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_07990
symbol: OIK15690.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SOS response-associated peptidase family.


ensembl_gene_id: BIV60_08020
symbol: BIV60_08020
gene_biotype: protein_coding
description:
  AMP-dependent synthetase; Frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08035
symbol: BIV60_08035
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08075
symbol: ilvA
gene_biotype: protein_coding
description:
  Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: BIV60_08085
symbol: OIK15703.1
gene_biotype: protein_coding
description:
  Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08090
symbol: OIK15704.1
gene_biotype: protein_coding
description:
  4-amino-4-deoxychorismate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08095
symbol: OIK15705.1
gene_biotype: protein_coding
description:
  Aminodeoxychorismate/anthranilate synthase component II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08100
symbol: OIK15706.1
gene_biotype: protein_coding
description:
  Aminodeoxychorismate synthase component I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08105
symbol: OIK15707.1
gene_biotype: protein_coding
description:
  Flavin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08110
symbol: OIK15708.1
gene_biotype: protein_coding
description:
  Aspartate ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08115
symbol: OIK15709.1
gene_biotype: protein_coding
description:
  L-asparaginase 1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08125
symbol: OIK15711.1
gene_biotype: protein_coding
description:
  Arylamine N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arylamine N-acetyltransferase family.


ensembl_gene_id: BIV60_08130
symbol: OIK15712.1
gene_biotype: protein_coding
description:
  Helicase SNF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08135
symbol: OIK15713.1
gene_biotype: protein_coding
description:
  Processed acidic surface protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: BIV60_08185
symbol: OIK15722.1
gene_biotype: protein_coding
description:
  Glucose dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08210
symbol: thiC
gene_biotype: protein_coding
description:
  Phosphomethylpyrimidine synthase ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.


ensembl_gene_id: BIV60_08220
symbol: OIK15728.1
gene_biotype: protein_coding
description:
  Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: BIV60_08270
symbol: OIK15736.1
gene_biotype: protein_coding
description:
  Peptidase C69; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08275
symbol: OIK15737.1
gene_biotype: protein_coding
description:
  Peptidase U62; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08280
symbol: OIK15738.1
gene_biotype: protein_coding
description:
  TIGR01777 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08320
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: BIV60_08330
symbol: OIK15747.1
gene_biotype: protein_coding
description:
  N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08345
symbol: OIK15750.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: BIV60_08360
symbol: OIK15752.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the 5'-nucleotidase family.


ensembl_gene_id: BIV60_08375
symbol: OIK15755.1
gene_biotype: protein_coding
description:
  ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08405
symbol: OIK15761.1
gene_biotype: protein_coding
description:
  NADH oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08410
symbol: OIK15762.1
gene_biotype: protein_coding
description:
  Bacteriocin biosynthesis protein SagD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08415
symbol: OIK15763.1
gene_biotype: protein_coding
description:
  Putative thiazole-containing bacteriocin maturation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08425
symbol: OIK15765.1
gene_biotype: protein_coding
description:
  Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08470
symbol: OIK15574.1
gene_biotype: protein_coding
description:
  FAD-binding dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08475
symbol: OIK15575.1
gene_biotype: protein_coding
description:
  AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08480
symbol: OIK15576.1
gene_biotype: protein_coding
description:
  DNA-3-methyladenine glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08490
symbol: OIK15667.1
gene_biotype: protein_coding
description:
  Cysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08495
symbol: OIK15578.1
gene_biotype: protein_coding
description:
  Prolyl 4-hydroxylase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08505
symbol: BIV60_08505
gene_biotype: protein_coding
description:
  Radical SAM protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08510
symbol: OIK15580.1
gene_biotype: protein_coding
description:
  RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: BIV60_08560
symbol: OIK15589.1
gene_biotype: protein_coding
description:
  Potassium uptake system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08565
symbol: OIK15590.1
gene_biotype: protein_coding
description:
  Sulfite oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08570
symbol: mntH
gene_biotype: protein_coding
description:
  Divalent metal cation transporter; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.


ensembl_gene_id: BIV60_08575
symbol: OIK15669.1
gene_biotype: protein_coding
description:
  Selenocysteine-specific translation elongation factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08580
symbol: OIK15592.1
gene_biotype: protein_coding
description:
  Tellurium resistance protein TerD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08585
symbol: OIK15593.1
gene_biotype: protein_coding
description:
  Sodium:alanine symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08590
symbol: hprK-2
gene_biotype: protein_coding
description:
  HPr(Ser) kinase/phosphatase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable car [...]


ensembl_gene_id: BIV60_08595
symbol: OIK15595.1
gene_biotype: protein_coding
description:
  Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: BIV60_08600
symbol: OIK15596.1
gene_biotype: protein_coding
description:
  Macrolide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08630
symbol: proS
gene_biotype: protein_coding
description:
  proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).


ensembl_gene_id: BIV60_08645
symbol: hmp
gene_biotype: protein_coding
description:
  Nitric oxide dioxygenase; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily.


ensembl_gene_id: BIV60_08660
symbol: OIK15671.1
gene_biotype: protein_coding
description:
  GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08680
symbol: BIV60_08680
gene_biotype: protein_coding
description:
  SCP-like extracellular protein; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08700
symbol: tatA-2
gene_biotype: protein_coding
description:
  Sec-independent protein translocase TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: BIV60_08715
symbol: OIK15614.1
gene_biotype: protein_coding
description:
  Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08720
symbol: OIK15615.1
gene_biotype: protein_coding
description:
  D-alanyl-lipoteichoic acid biosynthesis protein DltD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08725
symbol: dltC
gene_biotype: protein_coding
description:
  D-alanine--poly(phosphoribitol) ligase subunit 2; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC- carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall.


ensembl_gene_id: BIV60_08730
symbol: OIK15617.1
gene_biotype: protein_coding
description:
  D-alanyl-lipoteichoic acid biosynthesis protein DltB; Could be involved in the transport of activated D-alanine through the membrane.


ensembl_gene_id: BIV60_08735
symbol: dltA
gene_biotype: protein_coding
description:
  D-alanine--poly(phosphoribitol) ligase subunit 1; Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D- alanyl carrier protein (Dcp) DltC. In an ATP-dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. Belongs to  [...]


ensembl_gene_id: BIV60_08745
symbol: OIK15620.1
gene_biotype: protein_coding
description:
  Peptidase M42; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08760
symbol: OIK15623.1
gene_biotype: protein_coding
description:
  GTP cyclohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08815
symbol: OIK15634.1
gene_biotype: protein_coding
description:
  Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08820
symbol: OIK15635.1
gene_biotype: protein_coding
description:
  Aldehyde oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08825
symbol: OIK15636.1
gene_biotype: protein_coding
description:
  Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08840
symbol: OIK15639.1
gene_biotype: protein_coding
description:
  Spore gernimation protein GerB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08855
symbol: BIV60_08855
gene_biotype: protein_coding
description:
  Penicillin-binding protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08870
symbol: BIV60_08870
gene_biotype: protein_coding
description:
  Xanthine dehydrogenase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08875
symbol: OIK15675.1
gene_biotype: protein_coding
description:
  Carboxypeptidase M32; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.


ensembl_gene_id: BIV60_08920
symbol: OIK15651.1
gene_biotype: protein_coding
description:
  1,2-diacylglycerol 3-glucosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08935
symbol: OIK15654.1
gene_biotype: protein_coding
description:
  Polysaccharide biosynthesis protein GtrA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08940
symbol: OIK15655.1
gene_biotype: protein_coding
description:
  Phosphatase PAP2 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08960
symbol: OIK15658.1
gene_biotype: protein_coding
description:
  Cytochrome aa3 quinol oxidase subunit IV; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08965
symbol: OIK15659.1
gene_biotype: protein_coding
description:
  Cytochrome aa3 quinol oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08970
symbol: OIK15660.1
gene_biotype: protein_coding
description:
  Cytochrome aa3 quinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: BIV60_08975
symbol: OIK15661.1
gene_biotype: protein_coding
description:
  Cytochrome ubiquinol oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08980
symbol: OIK15662.1
gene_biotype: protein_coding
description:
  Heme biosynthesis protein HemY; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_08990
symbol: OIK15664.1
gene_biotype: protein_coding
description:
  Phosphoglycolate phosphatase, TA0175-type; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09000
symbol: OIK15666.1
gene_biotype: protein_coding
description:
  4-hydroxyphenylacetate 3-monooxygenase, oxygenase component; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09010
symbol: BIV60_09010
gene_biotype: protein_coding
description:
  IS110 family transposase; Frameshifted; incomplete; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09020
symbol: OIK15556.1
gene_biotype: protein_coding
description:
  Cell wall hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09035
symbol: OIK15559.1
gene_biotype: protein_coding
description:
  Heme ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09055
symbol: OIK15570.1
gene_biotype: protein_coding
description:
  Nitroreductase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09070
symbol: OIK15565.1
gene_biotype: protein_coding
description:
  Organic hydroperoxide resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09095
symbol: OIK15572.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.


ensembl_gene_id: BIV60_09100
symbol: OIK15569.1
gene_biotype: protein_coding
description:
  Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.


ensembl_gene_id: BIV60_09105
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: BIV60_09110
symbol: OIK15507.1
gene_biotype: protein_coding
description:
  Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: BIV60_09115
symbol: deoA
gene_biotype: protein_coding
description:
  Pyrimidine-nucleoside phosphorylase; Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09120
symbol: OIK15509.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family.


ensembl_gene_id: BIV60_09125
symbol: OIK15510.1
gene_biotype: protein_coding
description:
  Anti-sigma F factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family.


ensembl_gene_id: BIV60_09130
symbol: spoIIAB
gene_biotype: protein_coding
description:
  Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.


ensembl_gene_id: BIV60_09135
symbol: OIK15512.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: BIV60_09140
symbol: OIK15513.1
gene_biotype: protein_coding
description:
  Stage V sporulation protein AA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09145
symbol: OIK15514.1
gene_biotype: protein_coding
description:
  Stage V sporulation protein AB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09150
symbol: OIK15515.1
gene_biotype: protein_coding
description:
  Stage V sporulation protein AE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09160
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: BIV60_09165
symbol: OIK15518.1
gene_biotype: protein_coding
description:
  N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09175
symbol: OIK15520.1
gene_biotype: protein_coding
description:
  Sporulation protein YjcZ; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: BIV60_09180
symbol: scpA
gene_biotype: protein_coding
description:
  Segregation/condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: BIV60_09185
symbol: scpB
gene_biotype: protein_coding
description:
  SMC-Scp complex subunit ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: BIV60_09200
symbol: OIK15525.1
gene_biotype: protein_coding
description:
  Superoxide dismutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09210
symbol: OIK15526.1
gene_biotype: protein_coding
description:
  Spore maturation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09220
symbol: OIK15528.1
gene_biotype: protein_coding
description:
  Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: BIV60_09225
symbol: OIK15529.1
gene_biotype: protein_coding
description:
  Thiol-disulfide oxidoreductase; Catalyzes the reduction of the disulfide bonds in the heme binding site of apocytochrome c; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09230
symbol: OIK15530.1
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09235
symbol: OIK15531.1
gene_biotype: protein_coding
description:
  C-type cytochrome biogenesis protein CcsB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09250
symbol: OIK15534.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor SigX; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: BIV60_09265
symbol: OIK15537.1
gene_biotype: protein_coding
description:
  Riboflavin transporter FmnP; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family.


ensembl_gene_id: BIV60_09280
symbol: OIK15539.1
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09300
symbol: OIK15543.1
gene_biotype: protein_coding
description:
  Spore coat protein CotJC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09305
symbol: OIK15544.1
gene_biotype: protein_coding
description:
  Spore coat protein CotJB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09310
symbol: OIK15545.1
gene_biotype: protein_coding
description:
  Spore coat protein CotJA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09320
symbol: OIK15547.1
gene_biotype: protein_coding
description:
  Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09325
symbol: OIK15548.1
gene_biotype: protein_coding
description:
  Adaptor protein; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis; Belongs to the MecA family.


ensembl_gene_id: BIV60_09330
symbol: OIK15549.1
gene_biotype: protein_coding
description:
  Glutamate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: BIV60_09340
symbol: OIK15551.1
gene_biotype: protein_coding
description:
  Protease PrsW; Involved in the degradation of specific anti-sigma factors. Belongs to the protease PrsW family.


ensembl_gene_id: BIV60_09350
symbol: BIV60_09350
gene_biotype: protein_coding
description:
  Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: BIV60_09415
symbol: OIK15476.1
gene_biotype: protein_coding
description:
  6-phosphogluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09430
symbol: OIK15479.1
gene_biotype: protein_coding
description:
  Dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09440
symbol: bdbC
gene_biotype: protein_coding
description:
  Disulfide oxidoreductase; Required for disulfide bond formation in some proteins. Belongs to the DsbB family. BdbC subfamily.


ensembl_gene_id: BIV60_09455
symbol: OIK15483.1
gene_biotype: protein_coding
description:
  Xanthine permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09505
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: BIV60_09530
symbol: OIK15495.1
gene_biotype: protein_coding
description:
  FdrA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09545
symbol: OIK15498.1
gene_biotype: protein_coding
description:
  Carbamate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbamate kinase family.


ensembl_gene_id: BIV60_09575
symbol: OIK15393.1
gene_biotype: protein_coding
description:
  Resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09580
symbol: OIK15394.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0346 family.


ensembl_gene_id: BIV60_09590
symbol: OIK15396.1
gene_biotype: protein_coding
description:
  Lysine 2,3-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09600
symbol: OIK15398.1
gene_biotype: protein_coding
description:
  Putative beta-lysine N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09605
symbol: OIK15399.1
gene_biotype: protein_coding
description:
  Acetylornithine deacetylase; Catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09610
symbol: OIK15400.1
gene_biotype: protein_coding
description:
  Acyl CoA:acetate/3-ketoacid CoA transferase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09615
symbol: OIK15401.1
gene_biotype: protein_coding
description:
  Acyl CoA:acetate/3-ketoacid CoA transferase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09625
symbol: msrB-2
gene_biotype: protein_coding
description:
  Peptide-methionine (R)-S-oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09630
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: BIV60_09655
symbol: OIK15407.1
gene_biotype: protein_coding
description:
  Cytochrome c oxidase assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09680
symbol: tatC
gene_biotype: protein_coding
description:
  Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.


ensembl_gene_id: BIV60_09695
symbol: OIK15415.1
gene_biotype: protein_coding
description:
  Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.


ensembl_gene_id: BIV60_09700
symbol: thyA
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: BIV60_09705
symbol: OIK15417.1
gene_biotype: protein_coding
description:
  Chemical-damaging agent resistance protein C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09710
symbol: OIK15418.1
gene_biotype: protein_coding
description:
  Stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09715
symbol: OIK15419.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TelA family.


ensembl_gene_id: BIV60_09745
symbol: OIK15425.1
gene_biotype: protein_coding
description:
  Citrate lyase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09770
symbol: OIK15430.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0403 family.


ensembl_gene_id: BIV60_09775
symbol: OIK15431.1
gene_biotype: protein_coding
description:
  Virulence factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09790
symbol: OIK15433.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: BIV60_09810
symbol: OIK15436.1
gene_biotype: protein_coding
description:
  Glutathione peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutathione peroxidase family.


ensembl_gene_id: BIV60_09820
symbol: metAA
gene_biotype: protein_coding
description:
  Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.


ensembl_gene_id: BIV60_09835
symbol: mntR
gene_biotype: protein_coding
description:
  Manganese transport transcriptional regulator; Central regulator of manganese homeostasis. Belongs to the DtxR/MntR family.


ensembl_gene_id: BIV60_09840
symbol: OIK15441.1
gene_biotype: protein_coding
description:
  DNA topoisomerase III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09865
symbol: rnhA
gene_biotype: protein_coding
description:
  Ribonuclease HI; An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09885
symbol: OIK15450.1
gene_biotype: protein_coding
description:
  Small, acid-soluble spore protein L; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09890
symbol: OIK15464.1
gene_biotype: protein_coding
description:
  Flap endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09895
symbol: OIK15451.1
gene_biotype: protein_coding
description:
  Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09900
symbol: OIK15452.1
gene_biotype: protein_coding
description:
  Dynamin family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09910
symbol: OIK15454.1
gene_biotype: protein_coding
description:
  Type III polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09915
symbol: OIK15455.1
gene_biotype: protein_coding
description:
  Subunit I/II of b(o/a)3-type cytochrome C oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09920
symbol: OIK15456.1
gene_biotype: protein_coding
description:
  Cytochrome B5; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09925
symbol: OIK15457.1
gene_biotype: protein_coding
description:
  Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: BIV60_09935
symbol: OIK15349.1
gene_biotype: protein_coding
description:
  Quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09950
symbol: OIK15351.1
gene_biotype: protein_coding
description:
  Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09985
symbol: OIK15358.1
gene_biotype: protein_coding
description:
  AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_09990
symbol: OIK15359.1
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10015
symbol: OIK15364.1
gene_biotype: protein_coding
description:
  KamA family radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10030
symbol: OIK15367.1
gene_biotype: protein_coding
description:
  Sporulation protein YjcZ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10045
symbol: OIK15370.1
gene_biotype: protein_coding
description:
  Short chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10065
symbol: OIK15374.1
gene_biotype: protein_coding
description:
  Low temperature requirement protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10120
symbol: OIK15384.1
gene_biotype: protein_coding
description:
  DsbA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10140
symbol: OIK15089.1
gene_biotype: protein_coding
description:
  Tn3 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10155
symbol: OIK15092.1
gene_biotype: protein_coding
description:
  Aminodeoxychorismate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10190
symbol: BIV60_10190
gene_biotype: protein_coding
description:
  4-hydroxyphenylacetate 3-monooxygenase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10195
symbol: OIK15098.1
gene_biotype: protein_coding
description:
  Pyridoxamine 5-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10205
symbol: BIV60_10205
gene_biotype: protein_coding
description:
  GNAT family N-acetyltransferase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10235
symbol: BIV60_10235
gene_biotype: protein_coding
description:
  tRNA-specific adenosine deaminase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.


ensembl_gene_id: BIV60_10250
symbol: OIK15105.1
gene_biotype: protein_coding
description:
  Sugar phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10260
symbol: OIK15107.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10270
symbol: OIK15109.1
gene_biotype: protein_coding
description:
  Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: BIV60_10300
symbol: BIV60_10300
gene_biotype: protein_coding
description:
  Damage-inducible protein DinB; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10315
symbol: BIV60_10315
gene_biotype: protein_coding
description:
  UV damage repair protein UvrX; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10325
symbol: BIV60_10325
gene_biotype: protein_coding
description:
  DNA recombinase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10355
symbol: BIV60_10355
gene_biotype: protein_coding
description:
  IS110 family transposase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10380
symbol: OIK15126.1
gene_biotype: protein_coding
description:
  Phosphonate C-P lyase system protein PhnG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10385
symbol: OIK15127.1
gene_biotype: protein_coding
description:
  Phosphonate C-P lyase system protein PhnH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10390
symbol: OIK15128.1
gene_biotype: protein_coding
description:
  Carbon-phosphorus lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10395
symbol: OIK15129.1
gene_biotype: protein_coding
description:
  Carbon-phosphorus lyase complex subunit PhnJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10400
symbol: phnK
gene_biotype: protein_coding
description:
  Phosphonate C-P lyase system protein PhnK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10405
symbol: OIK15131.1
gene_biotype: protein_coding
description:
  alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10410
symbol: OIK15132.1
gene_biotype: protein_coding
description:
  Phosphonate C-P lyase system protein PhnL; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10415
symbol: OIK15133.1
gene_biotype: protein_coding
description:
  Phosphonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10420
symbol: phnC
gene_biotype: protein_coding
description:
  Phosphonate ABC transporter ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.


ensembl_gene_id: BIV60_10450
symbol: OIK15154.1
gene_biotype: protein_coding
description:
  Replication termination protein; Plays a role in DNA replication and termination (fork arrest mechanism). Two dimers of rtp bind to the two inverted repeat regions (IRI and IRII) present in the termination site. The binding of each dimer is centered on an 8 bp direct repeat.


ensembl_gene_id: BIV60_10455
symbol: OIK15140.1
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerS; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.


ensembl_gene_id: BIV60_10490
symbol: parC
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 2 subfamily.


ensembl_gene_id: BIV60_10495
symbol: parE
gene_biotype: protein_coding
description:
  DNA topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 2 subfamily.


ensembl_gene_id: BIV60_10500
symbol: OIK15149.1
gene_biotype: protein_coding
description:
  CoA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10520
symbol: BIV60_10520
gene_biotype: protein_coding
description:
  MarR family transcriptional regulator; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10535
symbol: OIK14963.1
gene_biotype: protein_coding
description:
  Sodium:proton exchanger; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10555
symbol: BIV60_10555
gene_biotype: protein_coding
description:
  DUF2680 domain-containing protein; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10560
symbol: OIK14967.1
gene_biotype: protein_coding
description:
  Branched chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10585
symbol: OIK14972.1
gene_biotype: protein_coding
description:
  Arginine:ornithine antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10625
symbol: OIK14979.1
gene_biotype: protein_coding
description:
  4-hydroxyphenylacetate 3-hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10630
symbol: OIK14980.1
gene_biotype: protein_coding
description:
  FAD synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10635
symbol: OIK14981.1
gene_biotype: protein_coding
description:
  Enamine deaminase RidA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10640
symbol: OIK14982.1
gene_biotype: protein_coding
description:
  Fimbrial assembly protein FimA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10660
symbol: OIK14986.1
gene_biotype: protein_coding
description:
  Betaine-aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: BIV60_10700
symbol: OIK14993.1
gene_biotype: protein_coding
description:
  Extradiol ring-cleavage dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10710
symbol: OIK14995.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.


ensembl_gene_id: BIV60_10720
symbol: OIK14997.1
gene_biotype: protein_coding
description:
  Aspartate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10725
symbol: OIK14998.1
gene_biotype: protein_coding
description:
  Aromatic ring-hydroxylating dioxygenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10735
symbol: OIK15025.1
gene_biotype: protein_coding
description:
  3-(cis-5,6-dihydroxycyclohexa-1, 3-dien-1-yl)propanoate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: BIV60_10750
symbol: OIK15002.1
gene_biotype: protein_coding
description:
  CBS domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10760
symbol: OIK15004.1
gene_biotype: protein_coding
description:
  Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10770
symbol: OIK15006.1
gene_biotype: protein_coding
description:
  2-keto-3-deoxygluconate permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10775
symbol: OIK15007.1
gene_biotype: protein_coding
description:
  Methionine aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10790
symbol: rocD
gene_biotype: protein_coding
description:
  Ornithine--oxo-acid transaminase; Catalyzes the interconversion of ornithine to glutamate semialdehyde.


ensembl_gene_id: BIV60_10830
symbol: OIK15017.1
gene_biotype: protein_coding
description:
  TIGR00266 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10835
symbol: OIK15018.1
gene_biotype: protein_coding
description:
  Sodium-independent anion transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10850
symbol: sbcD
gene_biotype: protein_coding
description:
  Exonuclease sbcCD subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: BIV60_10855
symbol: OIK15022.1
gene_biotype: protein_coding
description:
  ATP-dependent dsDNA exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10865
symbol: OIK14816.1
gene_biotype: protein_coding
description:
  Catalyzes the transamination of the aromatic amino acid forming a ketoacid; first step in aromatic amino acid degradation in lactococci; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10875
symbol: OIK14818.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate--protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: BIV60_10880
symbol: OIK14819.1
gene_biotype: protein_coding
description:
  Phosphocarrier protein HPr; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10885
symbol: OIK14820.1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: BIV60_10890
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.


ensembl_gene_id: BIV60_10895
symbol: OIK14822.1
gene_biotype: protein_coding
description:
  Aquaporin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MIP/aquaporin (TC 1.A.8) family.


ensembl_gene_id: BIV60_10900
symbol: OIK14823.1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate responsive antiterminator GlpP; Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA.


ensembl_gene_id: BIV60_10910
symbol: OIK14825.1
gene_biotype: protein_coding
description:
  DUF2187 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10920
symbol: OIK14827.1
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpA/ClpB family.


ensembl_gene_id: BIV60_10925
symbol: OIK14828.1
gene_biotype: protein_coding
description:
  Oligoendopeptidase F; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10950
symbol: OIK14832.1
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10955
symbol: OIK14833.1
gene_biotype: protein_coding
description:
  Nitrogen fixation protein FixC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_10975
symbol: mtnD
gene_biotype: protein_coding
description:
  Acireductone dioxygenase; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway.


ensembl_gene_id: BIV60_10980
symbol: mtnB
gene_biotype: protein_coding
description:
  Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P).


ensembl_gene_id: BIV60_10985
symbol: mtnX
gene_biotype: protein_coding
description:
  2-hydroxy-3-keto-5-methylthiopentenyl-1- phosphate phosphatase; Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl-1- phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene).


ensembl_gene_id: BIV60_10990
symbol: mtnW
gene_biotype: protein_coding
description:
  2,3-diketo-5-methylthiopentyl-1-phosphate enolase; Catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P) into 2-hydroxy-3-keto-5-methylthiopentenyl-1- phosphate (HK-MTPenyl-1-P); Belongs to the RuBisCO large chain family. Type IV subfamily.


ensembl_gene_id: BIV60_10995
symbol: OIK14841.1
gene_biotype: protein_coding
description:
  LL-diaminopimelate aminotransferase; Produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro; mutations do not affect methionine salvage in vivo however; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_11005
symbol: mtnK
gene_biotype: protein_coding
description:
  S-methyl-5-thioribose kinase; Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.


ensembl_gene_id: BIV60_11015
symbol: OIK14844.1
gene_biotype: protein_coding
description:
  Pyruvate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_11040
symbol: sspK
gene_biotype: protein_coding
description:
  Small, acid-soluble spore protein K; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SspK family.


ensembl_gene_id: BIV60_11050
symbol: OIK14678.1
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: BIV60_11060
symbol: OIK14680.1
gene_biotype: protein_coding
description:
  YfhD family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_11075
symbol: OIK14683.1
gene_biotype: protein_coding
description:
  Homoserine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_11080
symbol: argH
gene_biotype: protein_coding
description:
  Argininosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_11085
symbol: argG
gene_biotype: protein_coding
description:
  Argininosuccinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the argininosuccinate synthase family. Type 1 subfamily.


ensembl_gene_id: BIV60_11090
symbol: OIK14686.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: BIV60_11095
symbol: carB
gene_biotype: protein_coding
description:
  Carbamoyl phosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_11100
symbol: carA
gene_biotype: protein_coding
description:
  Carbamoyl phosphate synthase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CarA family.


ensembl_gene_id: BIV60_11105
symbol: argD
gene_biotype: protein_coding
description:
  Aspartate aminotransferase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: BIV60_11110
symbol: argB
gene_biotype: protein_coding
description:
  Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: BIV60_11115
symbol: argJ
gene_biotype: protein_coding
description:
  Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: BIV60_11120
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: BIV60_11155
symbol: gabD
gene_biotype: protein_coding
description:
  Succinate-semialdehyde dehydrogenase (NADP(+)); Catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_11160
symbol: OIK14699.1
gene_biotype: protein_coding
description:
  4-aminobutyrate--2-oxoglutarate transaminase; Catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: BIV60_11175
symbol: OIK14702.1
gene_biotype: protein_coding
description:
  GNAT family N-acetyltransferase; Catalyzes the formation of N-acetyl-L-glutamate from acetyl-CoA and L-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_11180
symbol: OIK14703.1
gene_biotype: protein_coding
description:
  Protein CsiD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_11190
symbol: OIK14705.1
gene_biotype: protein_coding
description:
  Hydroxyglutarate oxidase; Catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_11205
symbol: OIK14708.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter permease; Transports peptides consisting of two or three amino acids; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_11225
symbol: OIK14607.1
gene_biotype: protein_coding
description:
  B12-binding domain-containing radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_11235
symbol: OIK14609.1
gene_biotype: protein_coding
description:
  Small, acid-soluble spore protein, alpha/beta type; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_11245
symbol: sigI
gene_biotype: protein_coding
description:
  RNA polymerase sigma-I factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily.


ensembl_gene_id: BIV60_11250
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: BIV60_11260
symbol: OIK14614.1
gene_biotype: protein_coding
description:
  ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_11290
symbol: ppc
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family.


ensembl_gene_id: BIV60_11310
symbol: fabG
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP reductase; Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_11320
symbol: OIK14549.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: BIV60_11340
symbol: OIK14553.1
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_11370
symbol: OIK14559.1
gene_biotype: protein_coding
description:
  YozD family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_11390
symbol: OIK14563.1
gene_biotype: protein_coding
description:
  Nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_11485
symbol: OIK14582.1
gene_biotype: protein_coding
description:
  DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_11515
symbol: OIK14453.1
gene_biotype: protein_coding
description:
  Bacitracin ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_11525
symbol: OIK14455.1
gene_biotype: protein_coding
description:
  Allantoin permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_11560
symbol: glcB
gene_biotype: protein_coding
description:
  Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.


ensembl_gene_id: BIV60_11565
symbol: OIK14463.1
gene_biotype: protein_coding
description:
  NAD-dependent malic enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_11570
symbol: OIK14464.1
gene_biotype: protein_coding
description:
  5-carboxymethyl-2-hydroxymuconate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_11590
symbol: OIK14467.1
gene_biotype: protein_coding
description:
  Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_11595
symbol: allB
gene_biotype: protein_coding
description:
  Allantoinase; Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring; Belongs to the metallo-dependent hydrolases superfamily. Allantoinase family.


ensembl_gene_id: BIV60_11610
symbol: OIK14471.1
gene_biotype: protein_coding
description:
  Asp/Glu/hydantoin racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_11625
symbol: OIK14379.1
gene_biotype: protein_coding
description:
  Polysaccharide deacetylase family sporulation protein PdaB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_11630
symbol: OIK14380.1
gene_biotype: protein_coding
description:
  KinB-signaling pathway activation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_11635
symbol: OIK14381.1
gene_biotype: protein_coding
description:
  Spore gernimation protein GerD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_11640
symbol: OIK14382.1
gene_biotype: protein_coding
description:
  Chromosome partitioning protein ParA; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: BIV60_11650
symbol: OIK14384.1
gene_biotype: protein_coding
description:
  N-acetylmuramoyl-L-alanine amidase CwlD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_11665
symbol: rpsI
gene_biotype: protein_coding
description:
  30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family.


ensembl_gene_id: BIV60_11670
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: BIV60_11675
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine(38-40) synthase TruA; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: BIV60_11680
symbol: ecfT
gene_biotype: protein_coding
description:
  Cobalt ABC transporter permease; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: BIV60_11685
symbol: ecfA
gene_biotype: protein_coding
description:
  Energy-coupling factor ABC transporter ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: BIV60_11690
symbol: ecfA-2
gene_biotype: protein_coding
description:
  Energy-coupling factor transporter ATPase; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: BIV60_11695
symbol: rplQ
gene_biotype: protein_coding
description:
  50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_11700
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: BIV60_11705
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: BIV60_11710
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: BIV60_11715
symbol: rpmJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L36; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL36 family.


ensembl_gene_id: BIV60_11720
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: BIV60_11725
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: BIV60_11730
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: BIV60_11735
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: BIV60_11740
symbol: rpmD
gene_biotype: protein_coding
description:
  50S ribosomal protein L30; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_11745
symbol: rpsE
gene_biotype: protein_coding
description:
  30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: BIV60_11750
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: BIV60_11755
symbol: rplF
gene_biotype: protein_coding
description:
  50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: BIV60_11760
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: BIV60_11765
symbol: rpsN
gene_biotype: protein_coding
description:
  30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.


ensembl_gene_id: BIV60_11770
symbol: rplE
gene_biotype: protein_coding
description:
  50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: BIV60_11775
symbol: rplX
gene_biotype: protein_coding
description:
  50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: BIV60_11780
symbol: rplN
gene_biotype: protein_coding
description:
  50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: BIV60_11785
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: BIV60_11790
symbol: rpmC
gene_biotype: protein_coding
description:
  50S ribosomal protein L29; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL29 family.


ensembl_gene_id: BIV60_11795
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: BIV60_11800
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: BIV60_11805
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: BIV60_11810
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: BIV60_11815
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: BIV60_11820
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: BIV60_11830
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: BIV60_11835
symbol: rpsJ
gene_biotype: protein_coding
description:
  30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: BIV60_11840
symbol: tuf
gene_biotype: protein_coding
description:
  Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: BIV60_11845
symbol: fusA
gene_biotype: protein_coding
description:
  Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]


ensembl_gene_id: BIV60_11850
symbol: rpsG
gene_biotype: protein_coding
description:
  30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: BIV60_11855
symbol: rpsL
gene_biotype: protein_coding
description:
  30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: BIV60_11860
symbol: OIK14425.1
gene_biotype: protein_coding
description:
  Ribosomal protein L7Ae-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eL8 family.


ensembl_gene_id: BIV60_11865
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: BIV60_11875
symbol: OIK14428.1
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_11880
symbol: rplL
gene_biotype: protein_coding
description:
  50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: BIV60_11885
symbol: rplJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: BIV60_11890
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: BIV60_11895
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: BIV60_11900
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription termination/antitermination protein NusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: BIV60_11915
symbol: OIK14208.1
gene_biotype: protein_coding
description:
  3-deoxy-7-phosphoheptulonate synthase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).


ensembl_gene_id: BIV60_11920
symbol: OIK14209.1
gene_biotype: protein_coding
description:
  DNA recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_11925
symbol: OIK14210.1
gene_biotype: protein_coding
description:
  Nucleosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_11945
symbol: OIK14214.1
gene_biotype: protein_coding
description:
  ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_12040
symbol: OIK14231.1
gene_biotype: protein_coding
description:
  Replication protein RepB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_12100
symbol: OIK14242.1
gene_biotype: protein_coding
description:
  Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_12135
symbol: OIK14249.1
gene_biotype: protein_coding
description:
  DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family.


ensembl_gene_id: BIV60_12165
symbol: OIK14254.1
gene_biotype: protein_coding
description:
  Wall-associated protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: BIV60_12260
symbol: OIK14144.1
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: BIV60_12265
symbol: OIK14145.1
gene_biotype: protein_coding
description:
  Riboflavin synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_12270
symbol: ribBA
gene_biotype: protein_coding
description:
  Bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: BIV60_12275
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family.


ensembl_gene_id: BIV60_12285
symbol: btuC
gene_biotype: protein_coding
description:
  ABC transporter permease; Required for transport of corrinoids such as cobalamin; functions as a complex of BtuCDF; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: BIV60_12295
symbol: cobD
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: BIV60_12300
symbol: OIK14152.1
gene_biotype: protein_coding
description:
  Threonine-phosphate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_12310
symbol: cobQ
gene_biotype: protein_coding
description:
  Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: BIV60_12315
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin 5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: BIV60_12320
symbol: OIK14156.1
gene_biotype: protein_coding
description:
  Histidine phosphatase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_12330
symbol: OIK14158.1
gene_biotype: protein_coding
description:
  ATP:cob(I)alamin adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Cob(I)alamin adenosyltransferase family.


ensembl_gene_id: BIV60_12345
symbol: OIK14190.1
gene_biotype: protein_coding
description:
  Uracil permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_12350
symbol: OIK14160.1
gene_biotype: protein_coding
description:
  CoF synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_12355
symbol: OIK14191.1
gene_biotype: protein_coding
description:
  acyl-CoA reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_12360
symbol: OIK14161.1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_12365
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: BIV60_12370
symbol: OIK14163.1
gene_biotype: protein_coding
description:
  Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_12375
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: BIV60_12390
symbol: OIK14166.1
gene_biotype: protein_coding
description:
  Metabolite permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_12395
symbol: OIK14167.1
gene_biotype: protein_coding
description:
  Phage holin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_12490
symbol: OIK14185.1
gene_biotype: protein_coding
description:
  Ribonucleotide-diphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_12505
symbol: ppaC
gene_biotype: protein_coding
description:
  Manganese-dependent inorganic pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_12510
symbol: OIK13928.1
gene_biotype: protein_coding
description:
  Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M16 family.


ensembl_gene_id: BIV60_12520
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: BIV60_12525
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: BIV60_12530
symbol: OIK13932.1
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibF; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribF family.


ensembl_gene_id: BIV60_12535
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine(55) synthase TruB; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: BIV60_12540
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: BIV60_12550
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: BIV60_12555
symbol: OIK13937.1
gene_biotype: protein_coding
description:
  50S ribosomal protein L7; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_12565
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription termination/antitermination protein NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: BIV60_12570
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: BIV60_12575
symbol: polC
gene_biotype: protein_coding
description:
  PolC-type DNA polymerase III; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: BIV60_12580
symbol: OIK13941.1
gene_biotype: protein_coding
description:
  RIP metalloprotease RseP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_12585
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: BIV60_12590
symbol: OIK13943.1
gene_biotype: protein_coding
description:
  Phosphatidate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDS family.


ensembl_gene_id: BIV60_12595
symbol: OIK13944.1
gene_biotype: protein_coding
description:
  Isoprenyl transferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: BIV60_12600
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: BIV60_12610
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: BIV60_12615
symbol: rpsB
gene_biotype: protein_coding
description:
  30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family.


ensembl_gene_id: BIV60_12620
symbol: codY
gene_biotype: protein_coding
description:
  Transcriptional repressor CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family.


ensembl_gene_id: BIV60_12625
symbol: hslU
gene_biotype: protein_coding
description:
  HslU--HslV peptidase ATPase subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: BIV60_12630
symbol: hslV
gene_biotype: protein_coding
description:
  HslU--HslV peptidase proteolytic subunit; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: BIV60_12635
symbol: trmFO
gene_biotype: protein_coding
description:
  methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.


ensembl_gene_id: BIV60_12640
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: BIV60_12645
symbol: OIK13954.1
gene_biotype: protein_coding
description:
  DNA protecting protein DprA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_12650
symbol: sucD
gene_biotype: protein_coding
description:
  succinate--CoA ligase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: BIV60_12655
symbol: sucC
gene_biotype: protein_coding
description:
  succinate--CoA ligase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: BIV60_12665
symbol: OIK13958.1
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: BIV60_12670
symbol: OIK13959.1
gene_biotype: protein_coding
description:
  Signal peptidase I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.


ensembl_gene_id: BIV60_12675
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: BIV60_12680
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanosine(37)-N1)-methyltransferase TrmD; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: BIV60_12685
symbol: rimM
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: BIV60_12695
symbol: OIK13964.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0109 family.


ensembl_gene_id: BIV60_12700
symbol: rpsP
gene_biotype: protein_coding
description:
  30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family.


ensembl_gene_id: BIV60_12705
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: BIV60_12710
symbol: OIK13967.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.


ensembl_gene_id: BIV60_12715
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: BIV60_12720
symbol: smc
gene_biotype: protein_coding
description:
  Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: BIV60_12725
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: BIV60_12735
symbol: OIK13972.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: BIV60_12740
symbol: OIK13973.1
gene_biotype: protein_coding
description:
  [acyl-carrier-protein] S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_12745
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: BIV60_12750
symbol: fapR
gene_biotype: protein_coding
description:
  Fatty acid biosynthesis transcriptional regulator; Transcriptional factor involved in regulation of membrane lipid biosynthesis by repressing genes involved in fatty acid and phospholipid metabolism.


ensembl_gene_id: BIV60_12755
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: BIV60_12760
symbol: OIK13977.1
gene_biotype: protein_coding
description:
  L-serine dehydratase, iron-sulfur-dependent subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron-sulfur dependent L-serine dehydratase family.


ensembl_gene_id: BIV60_12765
symbol: OIK13978.1
gene_biotype: protein_coding
description:
  L-serine dehydratase, iron-sulfur-dependent subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron-sulfur dependent L-serine dehydratase family.


ensembl_gene_id: BIV60_12780
symbol: rpmB
gene_biotype: protein_coding
description:
  50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family.


ensembl_gene_id: BIV60_12785
symbol: spoVM
gene_biotype: protein_coding
description:
  Stage V sporulation protein M; Involved in the production of the spore cortex and coat; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_12790
symbol: OIK13983.1
gene_biotype: protein_coding
description:
  Thiamine diphosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_12795
symbol: OIK13984.1
gene_biotype: protein_coding
description:
  Ribulose-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribulose-phosphate 3-epimerase family.


ensembl_gene_id: BIV60_12800
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: BIV60_12810
symbol: OIK13987.1
gene_biotype: protein_coding
description:
  Protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_12815
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: BIV60_12820
symbol: OIK13989.1
gene_biotype: protein_coding
description:
  16S rRNA (cytosine(967)-C(5))-methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: BIV60_12825
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: BIV60_12830
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: BIV60_12835
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: BIV60_12840
symbol: OIK13993.1
gene_biotype: protein_coding
description:
  Bifunctional 4'-phosphopantothenoylcysteine decarboxylase/phosphopantothenoylcysteine synthetase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: BIV60_12845
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: BIV60_12855
symbol: OIK13996.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RemA family.


ensembl_gene_id: BIV60_12860
symbol: OIK13997.1
gene_biotype: protein_coding
description:
  YicC family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_12865
symbol: OIK13998.1
gene_biotype: protein_coding
description:
  Calcium-translocating P-type ATPase, PMCA-type; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_12875
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: BIV60_12880
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: BIV60_12885
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase B catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate.


ensembl_gene_id: BIV60_12890
symbol: pyrK
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).


ensembl_gene_id: BIV60_12895
symbol: carB-2
gene_biotype: protein_coding
description:
  Carbamoyl phosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CarB family.


ensembl_gene_id: BIV60_12905
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: BIV60_12910
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: BIV60_12920
symbol: pyrR
gene_biotype: protein_coding
description:
  Bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.


ensembl_gene_id: BIV60_12925
symbol: OIK14010.1
gene_biotype: protein_coding
description:
  Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: BIV60_12930
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: BIV60_12940
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: BIV60_12945
symbol: OIK14014.1
gene_biotype: protein_coding
description:
  Septum formation initiator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_12960
symbol: sepF
gene_biotype: protein_coding
description:
  Cell division protein SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.


ensembl_gene_id: BIV60_12965
symbol: OIK14018.1
gene_biotype: protein_coding
description:
  YggS family pyridoxal phosphate enzyme; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: BIV60_12970
symbol: OIK14019.1
gene_biotype: protein_coding
description:
  Laccase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the multicopper oxidase YfiH/RL5 family.


ensembl_gene_id: BIV60_12980
symbol: OIK14021.1
gene_biotype: protein_coding
description:
  Sporulation sigma factor SigG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: BIV60_12985
symbol: OIK14022.1
gene_biotype: protein_coding
description:
  Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: BIV60_12990
symbol: OIK14023.1
gene_biotype: protein_coding
description:
  sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR.


ensembl_gene_id: BIV60_13000
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: BIV60_13005
symbol: OIK14026.1
gene_biotype: protein_coding
description:
  Small basic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13010
symbol: OIK14027.1
gene_biotype: protein_coding
description:
  NgoFVII family restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13020
symbol: divIB
gene_biotype: protein_coding
description:
  Cell division protein FtsQ; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.


ensembl_gene_id: BIV60_13030
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: BIV60_13035
symbol: OIK14032.1
gene_biotype: protein_coding
description:
  Stage V sporulation protein E; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.


ensembl_gene_id: BIV60_13040
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: BIV60_13045
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: BIV60_13055
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: BIV60_13065
symbol: OIK14038.1
gene_biotype: protein_coding
description:
  Stage V sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13080
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA (cytosine(1402)-N(4))-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: BIV60_13085
symbol: mraZ
gene_biotype: protein_coding
description:
  Cell division/cell wall cluster transcriptional repressor MraZ; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MraZ family.


ensembl_gene_id: BIV60_13090
symbol: bshC
gene_biotype: protein_coding
description:
  Bacillithiol biosynthesis cysteine-adding enzyme BshC; Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH.


ensembl_gene_id: BIV60_13100
symbol: OIK14045.1
gene_biotype: protein_coding
description:
  2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.


ensembl_gene_id: BIV60_13105
symbol: OIK14046.1
gene_biotype: protein_coding
description:
  Carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13110
symbol: OIK14047.1
gene_biotype: protein_coding
description:
  Composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13115
symbol: OIK14048.1
gene_biotype: protein_coding
description:
  Biotin carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13130
symbol: OIK14051.1
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: BIV60_13135
symbol: rpmF
gene_biotype: protein_coding
description:
  50S ribosomal protein L32; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL32 family.


ensembl_gene_id: BIV60_13145
symbol: tmcAL
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.


ensembl_gene_id: BIV60_13155
symbol: OIK14056.1
gene_biotype: protein_coding
description:
  Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13160
symbol: OIK14057.1
gene_biotype: protein_coding
description:
  Sporulation integral membrane protein YlbJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13165
symbol: coaD
gene_biotype: protein_coding
description:
  Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: BIV60_13170
symbol: OIK14059.1
gene_biotype: protein_coding
description:
  16S rRNA (guanine(966)-N(2))-methyltransferase RsmD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13175
symbol: OIK14060.1
gene_biotype: protein_coding
description:
  Methylthioribose kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13185
symbol: OIK14062.1
gene_biotype: protein_coding
description:
  Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0342 family.


ensembl_gene_id: BIV60_13235
symbol: OIK14072.1
gene_biotype: protein_coding
description:
  Cytochrome c oxidase assembly factor CtaG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13240
symbol: OIK13805.1
gene_biotype: protein_coding
description:
  3-phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: BIV60_13250
symbol: OIK13806.1
gene_biotype: protein_coding
description:
  Transcriptional regulator YeiL; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13265
symbol: OIK13809.1
gene_biotype: protein_coding
description:
  Beta-ketoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: BIV60_13295
symbol: OIK13814.1
gene_biotype: protein_coding
description:
  Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13300
symbol: OIK13815.1
gene_biotype: protein_coding
description:
  2OG-Fe(II) oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron/ascorbate-dependent oxidoreductase family.


ensembl_gene_id: BIV60_13305
symbol: OIK13862.1
gene_biotype: protein_coding
description:
  RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13310
symbol: OIK13816.1
gene_biotype: protein_coding
description:
  Nucleotide excision repair endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13315
symbol: OIK13817.1
gene_biotype: protein_coding
description:
  Alkylphosphonate utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13320
symbol: OIK13818.1
gene_biotype: protein_coding
description:
  Amino acid permease; Involved in the transport across the cytoplasmic membrane of D-alanine, D-serine and glycine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13340
symbol: rlmH
gene_biotype: protein_coding
description:
  23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: BIV60_13345
symbol: OIK13823.1
gene_biotype: protein_coding
description:
  CxxH/CxxC protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13350
symbol: OIK13824.1
gene_biotype: protein_coding
description:
  Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13370
symbol: OIK13863.1
gene_biotype: protein_coding
description:
  Cell wall metabolism sensor histidine kinase WalK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13400
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: BIV60_13405
symbol: OIK13830.1
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: BIV60_13415
symbol: OIK13832.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.


ensembl_gene_id: BIV60_13425
symbol: OIK13834.1
gene_biotype: protein_coding
description:
  UTP--glucose-1-phosphate uridylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13430
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: BIV60_13435
symbol: OIK13836.1
gene_biotype: protein_coding
description:
  Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: BIV60_13445
symbol: ychF
gene_biotype: protein_coding
description:
  Redox-regulated ATPase YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: BIV60_13455
symbol: OIK13840.1
gene_biotype: protein_coding
description:
  DUF951 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13460
symbol: OIK13841.1
gene_biotype: protein_coding
description:
  Mechanosensitive ion channel protein MscS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13465
symbol: OIK13842.1
gene_biotype: protein_coding
description:
  Spore protease YyaC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13475
symbol: OIK13844.1
gene_biotype: protein_coding
description:
  Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family.


ensembl_gene_id: BIV60_13480
symbol: OIK13845.1
gene_biotype: protein_coding
description:
  Sporulation initiation inhibitor Soj; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13485
symbol: noc
gene_biotype: protein_coding
description:
  Nucleoid occlusion protein; Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division and chromosome segregation by preventing the formation of the Z ring through the nucleoid, which would cause chromosome breakage. Belongs to the ParB family.


ensembl_gene_id: BIV60_13490
symbol: rsmG
gene_biotype: protein_coding
description:
  16S rRNA (guanine(527)-N(7))-methyltransferase RsmG; Specifically methylates the N7 position of guanine in position 535 of 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: BIV60_13495
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: BIV60_13500
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: BIV60_13505
symbol: OIK13850.1
gene_biotype: protein_coding
description:
  Protein jag; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13510
symbol: yidC
gene_biotype: protein_coding
description:
  OxaA precursor; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins; Belongs to the OXA1/ALB3/YidC family. Type 2 subfamily.


ensembl_gene_id: BIV60_13515
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: BIV60_13520
symbol: rpmH
gene_biotype: protein_coding
description:
  50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL34 family.


ensembl_gene_id: BIV60_13525
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiation protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: BIV60_13530
symbol: OIK13855.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of  [...]


ensembl_gene_id: BIV60_13540
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication/repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: BIV60_13545
symbol: OIK13858.1
gene_biotype: protein_coding
description:
  DUF370 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13550
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: BIV60_13555
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: BIV60_13570
symbol: OIK13694.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport system II carrier protein; Component of the transport system for branched-chain amino acids.


ensembl_gene_id: BIV60_13580
symbol: guaC
gene_biotype: protein_coding
description:
  GMP reductase; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides; Belongs to the IMPDH/GMPR family. GuaC type 2 subfamily.


ensembl_gene_id: BIV60_13585
symbol: OIK13697.1
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13605
symbol: proC-2
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: BIV60_13635
symbol: OIK13718.1
gene_biotype: protein_coding
description:
  DUF4442 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13640
symbol: serC
gene_biotype: protein_coding
description:
  Phosphoserine transaminase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.


ensembl_gene_id: BIV60_13645
symbol: OIK13708.1
gene_biotype: protein_coding
description:
  Zinc ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: BIV60_13680
symbol: OIK13714.1
gene_biotype: protein_coding
description:
  enoyl-ACP reductase; Catalyzes a key regulatory step in fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13685
symbol: OIK13715.1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine--LPS N-acetylglucosamine transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13695
symbol: OIK13717.1
gene_biotype: protein_coding
description:
  Glycerol phosphate lipoteichoic acid synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LTA synthase family.


ensembl_gene_id: BIV60_13735
symbol: OIK13553.1
gene_biotype: protein_coding
description:
  Site-specific integrase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.


ensembl_gene_id: BIV60_13750
symbol: OIK13556.1
gene_biotype: protein_coding
description:
  DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13780
symbol: OIK13561.1
gene_biotype: protein_coding
description:
  RecT protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13900
symbol: OIK13583.1
gene_biotype: protein_coding
description:
  DUF1657 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13905
symbol: OIK13584.1
gene_biotype: protein_coding
description:
  Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13915
symbol: BIV60_13915
gene_biotype: protein_coding
description:
  Terminase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13935
symbol: OIK13501.1
gene_biotype: protein_coding
description:
  Methylhydantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13940
symbol: OIK13481.1
gene_biotype: protein_coding
description:
  Hydantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_13950
symbol: OIK13483.1
gene_biotype: protein_coding
description:
  Allophanate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14000
symbol: OIK13492.1
gene_biotype: protein_coding
description:
  FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14020
symbol: OIK13496.1
gene_biotype: protein_coding
description:
  Swarming motility protein SwrC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: BIV60_14025
symbol: OIK13497.1
gene_biotype: protein_coding
description:
  Threonine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14105
symbol: OIK13406.1
gene_biotype: protein_coding
description:
  Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14115
symbol: OIK13408.1
gene_biotype: protein_coding
description:
  Copper resistance protein CopZ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14120
symbol: OIK13409.1
gene_biotype: protein_coding
description:
  CsoR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14160
symbol: OIK13416.1
gene_biotype: protein_coding
description:
  (4Fe-4S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14170
symbol: OIK13418.1
gene_biotype: protein_coding
description:
  Pyridoxamine 5'-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14185
symbol: OIK13236.1
gene_biotype: protein_coding
description:
  Peptidoglycan hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14190
symbol: plsY-2
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: BIV60_14195
symbol: OIK13238.1
gene_biotype: protein_coding
description:
  Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14215
symbol: OIK13242.1
gene_biotype: protein_coding
description:
  Stage V sporulation protein K; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14220
symbol: tlp
gene_biotype: protein_coding
description:
  Small acid-soluble spore protein Tlp; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Tlp family.


ensembl_gene_id: BIV60_14225
symbol: sspN
gene_biotype: protein_coding
description:
  Acid-soluble spore protein N; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SspN family.


ensembl_gene_id: BIV60_14230
symbol: OIK13245.1
gene_biotype: protein_coding
description:
  Fur-regulated basic protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14235
symbol: OIK13246.1
gene_biotype: protein_coding
description:
  Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14245
symbol: mtnA
gene_biotype: protein_coding
description:
  S-methyl-5-thioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). Belongs to the EIF-2B alpha/beta/delta subunits family. MtnA subfamily.


ensembl_gene_id: BIV60_14260
symbol: sspO
gene_biotype: protein_coding
description:
  Small acid-soluble spore protein O; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SspO family.


ensembl_gene_id: BIV60_14270
symbol: sspP
gene_biotype: protein_coding
description:
  Acid-soluble spore protein P; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SspP family.


ensembl_gene_id: BIV60_14275
symbol: selA
gene_biotype: protein_coding
description:
  L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.


ensembl_gene_id: BIV60_14290
symbol: OIK13256.1
gene_biotype: protein_coding
description:
  UDP-glucose 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14295
symbol: OIK13257.1
gene_biotype: protein_coding
description:
  Glycine C-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14300
symbol: OIK13258.1
gene_biotype: protein_coding
description:
  2-nitropropane dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14305
symbol: xpt
gene_biotype: protein_coding
description:
  Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.


ensembl_gene_id: BIV60_14315
symbol: OIK13261.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the 'phage' integrase family.


ensembl_gene_id: BIV60_14330
symbol: OIK13264.1
gene_biotype: protein_coding
description:
  ATP-dependent DNA ligase; Catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14365
symbol: BIV60_14365
gene_biotype: protein_coding
description:
  Heme ABC transporter ATP-binding protein; Frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14370
symbol: OIK13269.1
gene_biotype: protein_coding
description:
  Tetracycline resistance MFS efflux pump; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14395
symbol: OIK13290.1
gene_biotype: protein_coding
description:
  Cytochrome ubiquinol oxidase subunit II; Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I. Belongs to the cytochrome c oxidase subunit 2 family.


ensembl_gene_id: BIV60_14400
symbol: OIK13274.1
gene_biotype: protein_coding
description:
  Cytochrome ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14405
symbol: OIK13275.1
gene_biotype: protein_coding
description:
  Cytochrome o ubiquinol oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14410
symbol: OIK13276.1
gene_biotype: protein_coding
description:
  Cytochrome o ubiquinol oxidase subunit IV; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14450
symbol: OIK13284.1
gene_biotype: protein_coding
description:
  Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: BIV60_14455
symbol: OIK13285.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the LTA synthase family.


ensembl_gene_id: BIV60_14460
symbol: OIK13286.1
gene_biotype: protein_coding
description:
  Arsenic transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14545
symbol: BIV60_14545
gene_biotype: protein_coding
description:
  tRNA-Arg; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the peptidase S8 family.


ensembl_gene_id: BIV60_14550
symbol: OIK13137.1
gene_biotype: protein_coding
description:
  N-methyltryptophan oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14600
symbol: OIK13145.1
gene_biotype: protein_coding
description:
  Phosphate starvation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14615
symbol: OIK13148.1
gene_biotype: protein_coding
description:
  HflC protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14635
symbol: kynU
gene_biotype: protein_coding
description:
  Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.


ensembl_gene_id: BIV60_14645
symbol: kynA
gene_biotype: protein_coding
description:
  Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.


ensembl_gene_id: BIV60_14650
symbol: kynB
gene_biotype: protein_coding
description:
  Arylformamidase; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation.


ensembl_gene_id: BIV60_14660
symbol: OIK13157.1
gene_biotype: protein_coding
description:
  NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14665
symbol: OIK13158.1
gene_biotype: protein_coding
description:
  Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14680
symbol: OIK13161.1
gene_biotype: protein_coding
description:
  succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14690
symbol: OIK13163.1
gene_biotype: protein_coding
description:
  Catalyzes the formation of acetoacetate from 3-hydroxybutyrate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14710
symbol: OIK13057.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the RbsD / FucU family.


ensembl_gene_id: BIV60_14715
symbol: rbsK
gene_biotype: protein_coding
description:
  Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.


ensembl_gene_id: BIV60_14730
symbol: OIK13061.1
gene_biotype: protein_coding
description:
  Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: BIV60_14740
symbol: BIV60_14740
gene_biotype: protein_coding
description:
  Glyoxalase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14750
symbol: OIK13064.1
gene_biotype: protein_coding
description:
  FMN reductase (NADPH); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14770
symbol: OIK13068.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14795
symbol: OIK13073.1
gene_biotype: protein_coding
description:
  Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14810
symbol: OIK13075.1
gene_biotype: protein_coding
description:
  Alkane 1-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14885
symbol: OIK13090.1
gene_biotype: protein_coding
description:
  Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: BIV60_14910
symbol: OIK12971.1
gene_biotype: protein_coding
description:
  D-cysteine desulfhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14915
symbol: OIK12972.1
gene_biotype: protein_coding
description:
  Class I and II aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14920
symbol: OIK12973.1
gene_biotype: protein_coding
description:
  Na+/H+ antiporter NhaC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14930
symbol: OIK12975.1
gene_biotype: protein_coding
description:
  Thiol reductase thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14955
symbol: OIK12979.1
gene_biotype: protein_coding
description:
  Cystathionine beta-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_14965
symbol: OIK12981.1
gene_biotype: protein_coding
description:
  Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.


ensembl_gene_id: BIV60_14975
symbol: BIV60_14975
gene_biotype: protein_coding
description:
  YvrJ family protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15010
symbol: BIV60_15010
gene_biotype: protein_coding
description:
  Translocation protein TolB; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15015
symbol: OIK12989.1
gene_biotype: protein_coding
description:
  Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15045
symbol: OIK12994.1
gene_biotype: protein_coding
description:
  Methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15085
symbol: OIK13053.1
gene_biotype: protein_coding
description:
  Mannosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15110
symbol: OIK13004.1
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CobW; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15175
symbol: OIK13017.1
gene_biotype: protein_coding
description:
  Polysaccharide deacetylase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15195
symbol: OIK13021.1
gene_biotype: protein_coding
description:
  Dithiol-disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15250
symbol: OIK13032.1
gene_biotype: protein_coding
description:
  Dihydroorotase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15255
symbol: OIK13033.1
gene_biotype: protein_coding
description:
  L-seryl-tRNA selenium transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15260
symbol: OIK13034.1
gene_biotype: protein_coding
description:
  2-dehydro-3-deoxyphosphooctonate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15265
symbol: OIK13035.1
gene_biotype: protein_coding
description:
  2-dehydro-3-deoxygluconokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15285
symbol: OIK13039.1
gene_biotype: protein_coding
description:
  Nucleotide pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15300
symbol: OIK13042.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: BIV60_15315
symbol: OIK13045.1
gene_biotype: protein_coding
description:
  Ligand-binding protein SH3; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15335
symbol: OIK13049.1
gene_biotype: protein_coding
description:
  YibE/F family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15380
symbol: OIK12904.1
gene_biotype: protein_coding
description:
  LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15460
symbol: OIK12837.1
gene_biotype: protein_coding
description:
  Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15465
symbol: OIK12838.1
gene_biotype: protein_coding
description:
  Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15475
symbol: BIV60_15475
gene_biotype: protein_coding
description:
  Spore protease YyaC; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15510
symbol: OIK12846.1
gene_biotype: protein_coding
description:
  Histidinol-phosphatase; Catalyzes the formation of L-histidinol from L-histidinol phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PHP hydrolase family. HisK subfamily.


ensembl_gene_id: BIV60_15535
symbol: OIK12851.1
gene_biotype: protein_coding
description:
  Trehalose utilization protein ThuA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15540
symbol: OIK12852.1
gene_biotype: protein_coding
description:
  Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15545
symbol: OIK12853.1
gene_biotype: protein_coding
description:
  Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15550
symbol: OIK12854.1
gene_biotype: protein_coding
description:
  Putative 2-aminoethylphosphonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15575
symbol: OIK12858.1
gene_biotype: protein_coding
description:
  Saccharopine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15700
symbol: glgB
gene_biotype: protein_coding
description:
  1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: BIV60_15705
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: BIV60_15710
symbol: OIK12762.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15720
symbol: OIK12764.1
gene_biotype: protein_coding
description:
  Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: BIV60_15725
symbol: menA
gene_biotype: protein_coding
description:
  1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.


ensembl_gene_id: BIV60_15735
symbol: menD
gene_biotype: protein_coding
description:
  2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily.


ensembl_gene_id: BIV60_15740
symbol: menH
gene_biotype: protein_coding
description:
  2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase; Catalyzes a proton abstraction reaction that results in 2,5- elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6- hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC).


ensembl_gene_id: BIV60_15745
symbol: menB
gene_biotype: protein_coding
description:
  1,4-dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA).


ensembl_gene_id: BIV60_15750
symbol: menE
gene_biotype: protein_coding
description:
  o-succinylbenzoate--CoA ligase; Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl-CoA (OSB-CoA); Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily.


ensembl_gene_id: BIV60_15755
symbol: OIK12771.1
gene_biotype: protein_coding
description:
  DUF1540 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15760
symbol: OIK12818.1
gene_biotype: protein_coding
description:
  Carbonic anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15765
symbol: OIK12772.1
gene_biotype: protein_coding
description:
  Membrane protein insertion efficiency factor YidD; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: BIV60_15770
symbol: luxS
gene_biotype: protein_coding
description:
  S-ribosylhomocysteine lyase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family.


ensembl_gene_id: BIV60_15790
symbol: OIK12776.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0753 family.


ensembl_gene_id: BIV60_15795
symbol: OIK12777.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase; Catalyzes the transfer of electrons from NADH to ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15805
symbol: OIK12820.1
gene_biotype: protein_coding
description:
  Nucleoside triphosphatase YtkD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family.


ensembl_gene_id: BIV60_15835
symbol: gcvT
gene_biotype: protein_coding
description:
  Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine.


ensembl_gene_id: BIV60_15840
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system protein H; Is also involved in protein lipoylation via its role as an octanoyl/lipoyl carrier protein intermediate; Belongs to the GcvH family.


ensembl_gene_id: BIV60_15845
symbol: gcvPA
gene_biotype: protein_coding
description:
  Glycine dehydrogenase (aminomethyl-transferring); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.


ensembl_gene_id: BIV60_15850
symbol: gcvPB
gene_biotype: protein_coding
description:
  Glycine dehydrogenase (aminomethyl-transferring); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily.


ensembl_gene_id: BIV60_15855
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: BIV60_15860
symbol: OIK12789.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HesB/IscA family.


ensembl_gene_id: BIV60_15865
symbol: OIK12790.1
gene_biotype: protein_coding
description:
  Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15870
symbol: purU
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).


ensembl_gene_id: BIV60_15880
symbol: OIK12793.1
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15900
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.


ensembl_gene_id: BIV60_15905
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: BIV60_15910
symbol: OIK12799.1
gene_biotype: protein_coding
description:
  Asparagine synthase (glutamine-hydrolyzing); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15915
symbol: OIK12800.1
gene_biotype: protein_coding
description:
  Phospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15920
symbol: OIK12801.1
gene_biotype: protein_coding
description:
  Tetraprenyl-beta-curcumene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15930
symbol: OIK12803.1
gene_biotype: protein_coding
description:
  TIGR01212 family radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15940
symbol: OIK12805.1
gene_biotype: protein_coding
description:
  Glycogen biosynthesis protein GlgD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15950
symbol: leuS
gene_biotype: protein_coding
description:
  leucine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: BIV60_15955
symbol: OIK12821.1
gene_biotype: protein_coding
description:
  Rhodanese-like domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15960
symbol: OIK12808.1
gene_biotype: protein_coding
description:
  Sporulation protein cse60; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15970
symbol: OIK12810.1
gene_biotype: protein_coding
description:
  Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_15975
symbol: OIK12811.1
gene_biotype: protein_coding
description:
  16S rRNA pseudouridine(516) synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: BIV60_15980
symbol: speD
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 2 subfamily.


ensembl_gene_id: BIV60_15995
symbol: OIK12815.1
gene_biotype: protein_coding
description:
  Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_16005
symbol: OIK12817.1
gene_biotype: protein_coding
description:
  GABA permease (4-amino butyrate transport carrier); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_16020
symbol: OIK12658.1
gene_biotype: protein_coding
description:
  Cell wall biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_16030
symbol: OIK12660.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0761 family.


ensembl_gene_id: BIV60_16055
symbol: OIK12665.1
gene_biotype: protein_coding
description:
  Para-nitrobenzyl esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BIV60_16070
symbol: OIK12604.1
gene_biotype: protein_coding
description:
  CtsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CtsR family.


ensembl_gene_id: BIV60_16080
symbol: mcsB
gene_biotype: protein_coding
description:
  Protein arginine kinase; Catalyzes the specific phosphorylation of arginine residues in a large number of proteins. Is part of the bacterial stress response system. Protein arginine phosphorylation has a physiologically important role and is involved in the regulation of many critical cellular processes, such as protein homeostasis, motility, competence, and stringent and stress responses, by regulating gene expression and protein activity.


ensembl_gene_id: BIV60_16085
symbol: OIK12607.1
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpA/ClpB family.


ensembl_gene_id: BIV60_16090
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: BIV60_16095
symbol: disA
gene_biotype: protein_coding
description:
  DNA integrity scanning protein DisA; Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation; upon encountering a lesion, the DisA focus arrests at the damaged site and halts c-di-AMP synthesis.


ensembl_gene_id: BIV60_16105
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: BIV60_16110
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


