# geneInfo

ensembl_gene_id: FTT_0001
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein dnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids.


ensembl_gene_id: FTT_0002
symbol: dnaN
gene_biotype: protein_coding
description:
  DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...]


ensembl_gene_id: FTT_0006
symbol: gabD1
gene_biotype: protein_coding
description:
  Succinate-semialdehyde dehydrogenase, fragment; Similar to Q92TE2 Probable succinate-semialdehyde dehydrogenase from Rhizobium meliloti (484 aa). FASTA: opt: 622 Z-score: 785.3 E(): 6.9e-36 Smith-Waterman score: 622; 55.294 identity in 170 aa overlap. This CDS is disrupted by the insertion of an ISFtu1 element causing a truncation at N-terminal.


ensembl_gene_id: FTT_0007
symbol: aspS
gene_biotype: protein_coding
description:
  Aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: FTT_0013c
symbol: isftu1-2
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, pseudogene; Similar to Q92C69 Hypothetical protein lin1322 from Listeria innocua (290 aa). FASTA: opt: 601 Z-score: 755.7 E(): 3e-34 Smith-Waterman score: 601; 31.507 identity in 292 aa. Contains a frameshift after aa 139. ORF ftt0012.


ensembl_gene_id: FTT_0015
symbol: purB
gene_biotype: protein_coding
description:
  Adenylosuccinate lyase; Similar to PUR8_THEMA Q9X0I0 Adenylosuccinate lyase from Thermotoga maritima (431 aa). FASTA: opt: 1078 Z-score: 1248.5 E(): 1.1e-61 Smith-Waterman score: 1078; 41.628 identity in 430 aa overlap.


ensembl_gene_id: FTT_0017
symbol: FTT_0017
gene_biotype: protein_coding
description:
  Conserved hypothetical membrane protein; Similar to Q8PAK3 Toxin secretion ABC transporter ATP-binding protein from Xanthomonas axonopodis (563 aa). FASTA: opt: 454 Z-score: 516.4 E(): 7.1e-21 Smith-Waterman score: 454; 24.395identity in 496 aa overlap ORF ftt0017.


ensembl_gene_id: FTT_0018
symbol: FTT_0018
gene_biotype: protein_coding
description:
  Secretion protein; Similar to Q8PMA5 RND efflux membrane fusion protein from Xanthomonas axonopodis (354 aa). FASTA: opt: 851 Z-score: 971.0 E(): 3.4e-46 Smith-Waterman score: 851; 37.846 identity in 325 aa overlap ORF ftt0018.


ensembl_gene_id: FTT_0019
symbol: gatC
gene_biotype: protein_coding
description:
  Glu-tRNAGln amidotransferase C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: FTT_0020
symbol: gatA
gene_biotype: protein_coding
description:
  Glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: FTT_0021
symbol: gatB
gene_biotype: protein_coding
description:
  Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: FTT_0023c
symbol: FTT_0023c
gene_biotype: protein_coding
description:
  Lipase/acyltransferase; Similar to Q9F7Y6 Glycerophospholipid-cholesterol acyltransferase from Aeromonas salmonicida (336 aa). FASTA: opt: 367 Z-score: 437.4 E(): 1.8e-16 Smith-Waterman score: 407; 30.183 identity in 328 aa overlap ORF ftt0023c.


ensembl_gene_id: FTT_0026c
symbol: FTT_0026c
gene_biotype: protein_coding
description:
  Conserved membrane protein; Similar to Q9HWP5 Probable MFS transporter from Pseudomonas aeruginosa (402 aa). FASTA: opt: 568 Z-score: 586.0 E(): 9.5e-25 Smith-Waterman score: 568; 26.425 identity in 386 aa overlap ORF ftt0026c.


ensembl_gene_id: FTT_0027c
symbol: lysA1
gene_biotype: protein_coding
description:
  Similar to DCDA_BACSU (P23630) Diaminopimelate decarboxylase from Bacillus subtilis (441 aa). FASTA: opt: 437 Z-score: 538.0 E(): 4.5e-22 Smith-Waterman score: 437; 27.295 identity in 414 aa overlap.


ensembl_gene_id: FTT_0028c
symbol: FTT_0028c
gene_biotype: protein_coding
description:
  Conserved membrane protein; Similar to YCEE_ECOLI (P25744) Hypothetical transport protein yce from E. coli (408 aa). FASTA: opt: 364 Z-score: 408.7 E(): 7.1e-15 Smith-Waterman score: 450; 26.582 identity in 395 aa overlap ORF ftt0028c.


ensembl_gene_id: FTT_0029c
symbol: FTT_0029c
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to AAO89973 (Q83EA5) FrgA protein from Coxiella burnetii (528 aa). FASTA: opt: 1047 Z-score: 1237.4 E(): 4.9e-61 Smith-Waterman score: 1053; 34.051 identity in 511 aa overlap ORF ftt0029c.


ensembl_gene_id: FTT_0030c
symbol: fur
gene_biotype: protein_coding
description:
  Similar to FUR_ECOLI (P06975) Ferric uptake regulation protein from E. coli (148 aa). FASTA: opt: 396 Z-score: 515.7 E(): 7.8e-21 Smith-Waterman score: 396; 40.714 identity in 140 aa overlap; Belongs to the Fur family.


ensembl_gene_id: FTT_0031
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH dehydrogenase I, A subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: FTT_0032
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH dehydrogenase I, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: FTT_0033
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH dehydrogenase I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: FTT_0034
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: FTT_0035
symbol: nuoE
gene_biotype: protein_coding
description:
  Similar to Q83BQ9 NADH dehydrogenase I, E subunit from Xanthomonas campestris (174 aa). FASTA: opt: 528 Z-score: 689.7 E(): 1.6e-30 Smith-Waterman score: 528; 52.318 identity in 151 aa overlap.


ensembl_gene_id: FTT_0036
symbol: nuoF
gene_biotype: protein_coding
description:
  NADH dehydrogenase I, F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.


ensembl_gene_id: FTT_0037
symbol: nuoG
gene_biotype: protein_coding
description:
  NADH dehydrogenase I, G subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.


ensembl_gene_id: FTT_0038
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH dehydrogenase I, H subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: FTT_0039
symbol: nuoI
gene_biotype: protein_coding
description:
  NADH dehydrogenase I, I subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: FTT_0040
symbol: nuoJ
gene_biotype: protein_coding
description:
  NADH dehydrogenase I, J subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: FTT_0041
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH dehydrogenase I, K subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: FTT_0042
symbol: nuoL
gene_biotype: protein_coding
description:
  Similar to Q83BR6 NADH dehydrogenase I, L subunit from Coxiella burnetii (653 aa). FASTA: opt: 1934 Z-score: 2065.6 E(): 3.6e-107 Smith-Waterman score: 2090; 50.760 identity in 658 aa overlap.


ensembl_gene_id: FTT_0043
symbol: nuoM
gene_biotype: protein_coding
description:
  Similar to Q83BR7 NADH dehydrogenase I, M subunit from Coxiella burnetii (506 aa). FASTA: opt: 1099 Z-score: 1147.9 E(): 4.8e-56 Smith-Waterman score: 1659; 47.228 identity in 523 aa overlap.


ensembl_gene_id: FTT_0044
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH dehydrogenase I, N subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: FTT_0045
symbol: FTT_0045
gene_biotype: protein_coding
description:
  Similar to Q8DDC7 Conserved hypothetical protein from Vibrio vulnificus (83 aa). FASTA: opt: 165 Z-score: 224.7 E(): 0.00013 Smith-Waterman score: 165; 45.763 identity in 59 aa overlap ORF ftt0045.


ensembl_gene_id: FTT_0047
symbol: hemE
gene_biotype: protein_coding
description:
  Chelatase family protein, pseudogene; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: FTT_0048
symbol: rimP
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: FTT_0049
symbol: nusA
gene_biotype: protein_coding
description:
  N utilization substance protein A; Participates in both transcription termination and antitermination.


ensembl_gene_id: FTT_0050
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: FTT_0051
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: FTT_0052
symbol: hisS
gene_biotype: protein_coding
description:
  Similar to SYH_ECOLI (P04804) Histidyl-tRNA synthetase from E. coli (423 aa). FASTA: opt: 1370 Z-score: 1670.1 E(): 3.9e-85 Smith-Waterman score: 1370; 50.493 identity in 406 aa overlap.


ensembl_gene_id: FTT_0053
symbol: FTT_0053
gene_biotype: protein_coding
description:
  Similar to AAO90449 (Q83D24) Major facilitator family transporter from Coxiella burnetii (437 aa). FASTA: opt: 908 Z-score: 1023.7 E(): 3.6e-49 Smith-Waterman score: 909; 36.603 identity in 418 aa overlap ORF ftt0053.


ensembl_gene_id: FTT_0054
symbol: FTT_0054
gene_biotype: protein_coding
description:
  ATPase; Similar to YHCM_ECOLI (P46442) Hypothetical protein yhcM from E. coli (375 aa). FASTA: opt: 872 Z-score: 1033.2 E(): 1.2e-49 Smith-Waterman score: 898; 39.833 identity in 359 aa overlap ORF ftt0054.


ensembl_gene_id: FTT_0055
symbol: rluC
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase C; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: FTT_0056c
symbol: FTT_0056c
gene_biotype: protein_coding
description:
  Similar to Q83D24 (Q83D24) Major facilitator family transporter from Coxiella burnetii (437 aa). FASTA: opt: 1028 Z-score: 1172.6 E(): 2e-57 Smith-Waterman score: 1036; 40.187 identity in 428 aa overlap ORF ftt0056c.


ensembl_gene_id: FTT_0058
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase A chain; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.


ensembl_gene_id: FTT_0059
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase C chain; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: FTT_0060
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase B chain; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: FTT_0061
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase delta chain; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family.


ensembl_gene_id: FTT_0062
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase alpha chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: FTT_0063
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: FTT_0064
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: FTT_0065
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase epsilon chain; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: FTT_0067c
symbol: grxD
gene_biotype: protein_coding
description:
  Similar to Q8D879 Glutaredoxin-related protein from Vibrio vulnificus (112 aa). FASTA: opt: 485 Z-score: 630.6 E(): 2.8e-27 Smith-Waterman score: 485; 65.306 identity in 98 aa overlap ORF ftt0067c; Belongs to the glutaredoxin family. Monothiol subfamily.


ensembl_gene_id: FTT_0068
symbol: sodB
gene_biotype: protein_coding
description:
  Superoxide dismutase [Fe]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: FTT_0070c
symbol: ampG
gene_biotype: protein_coding
description:
  Major facilitator superfamily (MFS) tranport protein; Similar to AMPG_ECOLI (P36670) AmpG protein from E. coli (491 aa). FASTA: opt: 996 Z-score: 1121.1 E(): 1.5e-54 Smith-Waterman score: 996; 38.614 identity in 404 aa overlap.


ensembl_gene_id: FTT_0071c
symbol: gltA
gene_biotype: protein_coding
description:
  Citrate synthase; Similar to CISY_PSEAE (P14165) Citrate synthase from Pseudomonas aeruginosa (428 aa). FASTA: opt: 1540 Z-score: 1956.3 E(): 4.5e-101 Smith-Waterman score: 1540; 57.353 identity in 408 aa overlap.


ensembl_gene_id: FTT_0072
symbol: sdhC
gene_biotype: protein_coding
description:
  Similar to Q884A1 Succinate dehydrogenase, cytochrome b556 subunit from Pseudomonas syringae (124 aa). FASTA: opt: 332 Z-score: 413.6 E(): 3.8e-15 Smith-Waterman score: 332; 39.844identity in 128 aa overlap.


ensembl_gene_id: FTT_0073
symbol: sdhD
gene_biotype: protein_coding
description:
  Succinate dehydrogenase hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH).


ensembl_gene_id: FTT_0074
symbol: sdhA
gene_biotype: protein_coding
description:
  Succinate dehydrogenase, catalytic and NAD/flavoprotein subunit; Similar to Q9I3D5 Succinate dehydrogenase (A subunit) from Pseudomonas aeruginosa (590 aa). FASTA: opt: 2468 Z-score: 2874.7 E(): 3.2e-152 Smith-Waterman score: 2468; 61.139 identity in 597 aa overlap; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.


ensembl_gene_id: FTT_0075
symbol: sdhB
gene_biotype: protein_coding
description:
  Similar to Q8EFP1 Succinate dehydrogenase, iron-sulfur protein from Shewanella oneidensis (235 aa). FASTA: opt: 1170 Z-score: 1456.9 E(): 2.9e-73 Smith-Waterman score: 1170; 67.234 identity in 235 aa overlap; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.


ensembl_gene_id: FTT_0076
symbol: sucA
gene_biotype: protein_coding
description:
  Similar to Q883Z7 2-oxoglutarate dehydrogenase, E1 component from Pseudomonas syringae (943 aa). FASTA: opt: 3013 Z-score: 3478.7 E(): 7.1e-186 Smith-Waterman score: 3013; 49.523 identity in 943 aa overlap.


ensembl_gene_id: FTT_0077
symbol: sucB
gene_biotype: protein_coding
description:
  Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: FTT_0078
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: FTT_0079
symbol: mrsA
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: FTT_0080
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: FTT_0081
symbol: secG
gene_biotype: protein_coding
description:
  Preprotein translocase, subunit G, membrane protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: FTT_0083
symbol: FTT_0083
gene_biotype: protein_coding
description:
  Transcriptional regulator, pseudogene; Similar to Q9CG05 LysR family transcriptional regulator from Lactococcus lactis (273 aa) .FASTA: opt: 186 Z-score: 225.0 E(): 0.00011 Smith-Waterman score: 186; 23.574 identity in 263 aa overlap. Contains an in-frame stop codon after aa 197 ORF ftt0082.


ensembl_gene_id: FTT_0084c
symbol: hemN
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: FTT_0085c
symbol: FTT_0085c
gene_biotype: protein_coding
description:
  Similar to YWCD_BACSU P39602 Hypothetical protein ywcD from Bacillus subtilis (127 aa). FASTA: opt: 162 Z-score: 223.9 E(): 0.00013 Smith-Waterman score: 162; 26.667 identity in 120 aa overlap ORF ftt0085c.


ensembl_gene_id: FTT_0086
symbol: FTT_0086
gene_biotype: protein_coding
description:
  Similar to Q9I078 Hypothetical protein PA2765 from Pseudomonas aeruginosa (299 aa). FASTA: opt: 656 Z-score: 793.3 E(): 2.4e-36 Smith-Waterman score: 656; 36.678 identity in 289 aa overlap ORF ftt0086.


ensembl_gene_id: FTT_0088
symbol: pilT
gene_biotype: protein_coding
description:
  Type IV pili nucleotide-binding protein; Similar to Q8EBZ4 Twitching motility protein PilT from Shewanella oneidensis (345 aa). FASTA: opt: 1226 Z-score: 1391.3 E(): 1.3e-69 Smith-Waterman score: 1226; 57.186 identity in 334 aa overlap Required for pili retraction probably by filament disassembly. Homologous to pilB but which has the opposite effect. Unique to type IV pili.


ensembl_gene_id: FTT_0090c
symbol: FTT_0090c
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, pseudogene; Similar to Q9HVD5 Hypothetical protein PA4657 from Pseudomonas aeruginosa (327 aa). FASTA: 552 Z-score: 636.7 E(): 1.3e-27 Smith-Waterman score: 552; 28.395 identity in 324 aa overlap. Contains 2 frameshifts after aa 73 and 158 ORF ftt0089c.


ensembl_gene_id: FTT_0091c
symbol: appB
gene_biotype: protein_coding
description:
  Similar to Q87H27 Cytochrome BD2, subunit II from Vibrio parahaemolyticus (335 aa). FASTA: opt: 573 Z-score: 669.5 E(): 1.9e-29 Smith-Waterman score: 750; 34.743 identity in 331 aa overlap.


ensembl_gene_id: FTT_0093
symbol: appC
gene_biotype: protein_coding
description:
  Similar to Q92IY2 Cytochrome d ubiquinol oxidase subunit I from Rickettsia conorii (456 aa). FASTA: opt: 1445 Z-score: 1673.2 E(): 2.4e-85 Smith-Waterman score: 1443; 49.083identity in 436 aa overlap. Contains an in-frame stop codon after aa 80.


ensembl_gene_id: FTT_0094c
symbol: qseC
gene_biotype: protein_coding
description:
  Similar to AAO90737 (Q83CA0) Sensor histidine kinase from Coxiella burnetii (478 aa). FASTA: opt: 653 Z-score: 752.8 E(): 4.9e-34 Smith-Waterman score: 677; 29.083 identity in 447 aa overlap Sensory histidine kinase in two-component regulatory system with QseB, regulates flagella and motility by quorum sensing in E. coli, according to Q8X524.


ensembl_gene_id: FTT_0098c
symbol: isftu1-3
gene_biotype: protein_coding
description:
  ISFtu1. Transposase, member of the IS630 Tc-1 mariner family. Identical to Q93EJ6 Putative transposase from Francisella tularensis (118 aa) from aa 144-261. Identical to Q93EJ7 putative transposase from Francisella tularensis (126 aa) from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF's. ORF1 (identical to Q93EJ7) contains a programmed ribosomal frameshifting motif, 5'-AAAAAAAG-3' at aa position 109 which permits frameshifting to ORF2 (identical to Q93EJ6) to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family, and a [...]


ensembl_gene_id: FTT_0099
symbol: isftu2
gene_biotype: protein_coding
description:
  ISFtu2. Transposase, member of the IS5 family. Identical to Q8GM03 putative transposase from Francisella tularensis (247 aa).


ensembl_gene_id: FTT_0101
symbol: FTT_0101
gene_biotype: protein_coding
description:
  Transposase, fragment; Similar to Q9K0L1 IS1016C2 transposase from Neisseria meningitidis serogroup B strain MC58 (222 aa). FASTA: opt: 368 Z-score: 482.6 E(): 5e-19 Smith-Waterman score: 368; 49.123 identity in 114 aa overlap. This CDS has no start codon due to disruption by the insertion of an ISFtu1 element at the N-terminal end Identical to carboxy terminus of FTT1053c and FTT1792c ORF ftt0100.


ensembl_gene_id: FTT_0103c
symbol: FTT_0103c
gene_biotype: protein_coding
description:
  Similar to NP_927686.1| Transposase, IS982 family from Photorhabdus luminescens subsp laumondii TTO1. Score = 170 bits (431),Expect = 2e-41 Identities = 95/258 (36), Positives = 146/258 (56), Gaps = 5/258 (1). Contains an in-frame stop codon after aa 87 and frameshifts after aa 138 and 216 ORF ftt0102.


ensembl_gene_id: FTT_0104c
symbol: FTT_0104c
gene_biotype: protein_coding
description:
  Similar to Q83DX6 Major facilitator family transporter from Coxiella burnetii (421 aa). FASTA: opt: 995 Z-score: 1049.4 E(): 1.5e-50 Smith-Waterman score: 995; 39.066identity in 407 aa overlap ORF ftt0104c.


ensembl_gene_id: FTT_0105c
symbol: FTT_0105c
gene_biotype: protein_coding
description:
  Similar to AAO90606 (Q83CM1) Transporter,AcrB/AcrD/AcrF family from Coxiella burnetii (1019 aa). FASTA: opt: 2662 Z-score: 2840.6 E(): 2.3e-150 Smith-Waterman score: 3071; 45.171identity in 1025 aa overlap ORF ftt0105c; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: FTT_0106c
symbol: FTT_0106c
gene_biotype: protein_coding
description:
  Similar to Q83CM0 Efflux transporter, RND family, MFP subunit from Coxiella burnetti (380 aa). FASTA: opt: 732 Z-score: 824.0 E(): 5.2e-38 Smith-Waterman score: 781; 34.748identity in 377 aa overlap ORF ftt0106c; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: FTT_0107c
symbol: dsbB
gene_biotype: protein_coding
description:
  Similar to DSBB_NEIMB (Q9JYC6) Disulfide bond formation protein B (disuphide oxidoreductase) from Neisseria meningitidis (162 aa). FASTA: opt: 171 Z-score: 223.1 E(): 0.00014 Smith-Waterman score: 171; 27.344 identity in 128 aa overlap.


ensembl_gene_id: FTT_0108c
symbol: cca
gene_biotype: protein_coding
description:
  tRNA nucleotidyltransferase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. Bacterial CCA-adding enzyme type 2 subfamily.


ensembl_gene_id: FTT_0109
symbol: msbA
gene_biotype: protein_coding
description:
  Lipid A transport protein, ABC transporter,ATP-binding and membrane protein; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.


ensembl_gene_id: FTT_0110
symbol: lpxK
gene_biotype: protein_coding
description:
  Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: FTT_0111
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: FTT_0112
symbol: coaX1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis; Belongs to the type III pantothenate kinase family.


ensembl_gene_id: FTT_0113
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: FTT_0114
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate.


ensembl_gene_id: FTT_0115
symbol: nupC1
gene_biotype: protein_coding
description:
  Similar to AAP07626 (Q81I17) Nucleoside permease nupC from Bacillus cereus (392 aa). FASTA: opt: 1236 Z-score: 1430.7 E(): 7.7e-72 Smith-Waterman score: 1236; 49.246 identity in 398 aa overlap Paralog of FTT0116.


ensembl_gene_id: FTT_0116
symbol: nupC1-2
gene_biotype: protein_coding
description:
  Similar to (AAP07626) Q81I17 Nucleoside permease nupC from Bacillus cereus (392 aa). FASTA: opt: 1351 Z-score: 1549.9 E(): 1.9e-78 Smith-Waterman score: 1351; 52.381 identity in 399 aa overlap Paralog of FTT0115.


ensembl_gene_id: FTT_0117
symbol: nupC2
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: FTT_0118
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: FTT_0120
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.


ensembl_gene_id: FTT_0121
symbol: uvrD
gene_biotype: protein_coding
description:
  Similar to Q88C31 DNA helicase II from Pseudomonas putida (728 aa). FASTA: opt: 1880 Z-score: 2129.9 E(): 9.6e-111 Smith-Waterman score: 2083; 45.867 identity in 750 aa overlap.


ensembl_gene_id: FTT_0125
symbol: oppD
gene_biotype: protein_coding
description:
  Oligopeptide transporter, subunit C, ABC transporter, membrane protein, pseudogene; Similar to Q87MY7 Oligopeptide ABC transporter,permease frim Vibrio parahaemolyticus (300 aa). FASTA: opt: 1042 Z-score: 1224.8 E(): 2.3e-60 Smith-Waterman score: 1042; 52.857 identity in 280 aa overlap. Contains no start codon and a frameshift after aa 74.


ensembl_gene_id: FTT_0126
symbol: oppF
gene_biotype: protein_coding
description:
  Oligopeptide transporter, subunit F, ABC transporter, ATP-binding protein; Similar to OPPF_HAEIN (P45051) Oligopeptide transport ATP-binding oppF from Haemophilus influenzae (332 aa). FASTA: opt: 1227 Z-score: 1398.5 E(): 5.3e-70 Smith-Waterman score: 1227; 56.790 identity in 324 aa overlap; Belongs to the ABC transporter superfamily.


ensembl_gene_id: FTT_0127c
symbol: FTT_0127c
gene_biotype: protein_coding
description:
  Similar to Q83CF6 Major facilitator family transporter from Coxiella burnetii (443 aa). FASTA: opt: 488 Z-score: 542.0 E(): 2.7e-22 Smith-Waterman score: 490; 27.621identity in 391 aa overlap ORF ftt0127c.


ensembl_gene_id: FTT_0129
symbol: FTT_0129
gene_biotype: protein_coding
description:
  Similar to Q83BM0 (Q83BM0) Major facilitator family transporter from Coxiella burnetii (428 aa). FASTA: opt: 497 Z-score: 533.3 E(): 8.2e-22 Smith-Waterman score: 529; 26.355 identity in 406 aa overlap ORF ftt0129.


ensembl_gene_id: FTT_0130
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.


ensembl_gene_id: FTT_0132
symbol: glpA
gene_biotype: protein_coding
description:
  Similar to O51259 Glycerol-3-phosphate dehydrogenase, anaerobic, from Borrelia burgdorferii (527 aa). FASTA: opt: 1330 Z-score: 1506.9 E(): 4.8e-76 Smith-Waterman score: 1330; 43.333 identity in 510 aa overlap.


ensembl_gene_id: FTT_0133
symbol: glpF
gene_biotype: protein_coding
description:
  Similar to CAD75967 (Q7UMF0) Probable glycerol uptake facilitator protein from Rhodopirelulla baltica (271 aa). FASTA: opt: 796 Z-score: 888.1 E(): 1.4e-41 Smith-Waterman score: 796; 50.209 identity in 239 aa overlap; Belongs to the MIP/aquaporin (TC 1.A.8) family.


ensembl_gene_id: FTT_0136
symbol: FTT_0136
gene_biotype: protein_coding
description:
  Ion channel protein, fragment; Similar to YGGB_EDWIC (O52401) Hypothetical UPF0003 protein in iciA-fba intergenic region from Edwardsiella ictaluri (286 aa). FASTA: opt: 317 Z-score: 385.5 E(): 1.4e-13 Smith-Waterman score: 317; 33.121 identity in 157 aa overlap. Truncation of C-terminal according to FASTA hits ORF ftt0135.


ensembl_gene_id: FTT_0137
symbol: tufA
gene_biotype: protein_coding
description:
  Elongation factor Tu (EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: FTT_0138
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase, subunit E, membrane protein; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family.


ensembl_gene_id: FTT_0139
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: FTT_0140
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: FTT_0141
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: FTT_0142
symbol: rplJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: FTT_0143
symbol: rplL
gene_biotype: protein_coding
description:
  50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: FTT_0144
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: FTT_0145
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: FTT_0147
symbol: gcp
gene_biotype: protein_coding
description:
  O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: FTT_0148
symbol: FTT_0148
gene_biotype: protein_coding
description:
  Fatty acid desaturase; Similar to Q27437 Stearoyl-CoA desaturase from Amblyomma americanum (317 aa). FASTA: opt: 653 Z-score: 747.5 E(): 9.6e-34 Smith-Waterman score: 653; 36.897 identity in 290 aa overlap ORF ftt0148.


ensembl_gene_id: FTT_0149c
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: FTT_0150
symbol: rpsP
gene_biotype: protein_coding
description:
  Similar to AAP96669 (Q7VKG0) 30S ribosomal protein S16 from Haemophilus ducreyi (82 aa). FASTA: opt: 423 Z-score: 598.5 E(): 1.9e-25 Smith-Waterman score: 423; 75.610 identity in 82 aa overlap; Belongs to the bacterial ribosomal protein bS16 family.


ensembl_gene_id: FTT_0151
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein rimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: FTT_0152
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (Guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: FTT_0153
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: FTT_0154
symbol: xerD
gene_biotype: protein_coding
description:
  Integrase/recombinase; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: FTT_0155
symbol: FTT_0155
gene_biotype: protein_coding
description:
  Similar to Q87HU0 Putative oxidoreductase iron/ascorbate from Vibrio parahaemolyticus (279 aa). FASTA: opt: 944 Z-score: 1155.0 E(): 1.9e-56 Smith-Waterman score: 944; 49.110 identity in 281 aa overlap ORF ftt0155; Belongs to the iron/ascorbate-dependent oxidoreductase family.


ensembl_gene_id: FTT_0156
symbol: FTT_0156
gene_biotype: protein_coding
description:
  Similar to Q83EI5 Acid phosphatase, class B from Coxiella burnetti (221 aa). FASTA: opt: 326 Z-score: 430.9 E(): 4.1e-16 Smith-Waterman score: 326; 32.642identity in 193 aa overlap ORF ftt0156.


ensembl_gene_id: FTT_0157c
symbol: FTT_0157c
gene_biotype: protein_coding
description:
  licB-like transmembrane protein; Similar to Q8XMR0 Probable lic-1 operon protein from Clostridium perfringens (322 aa). FASTA: opt: 370 Z-score: 410.4 E(): 5.7e-15 Smith-Waterman score: 396; 30.492 identity in 305 aa overlap ORF ftt0157c.


ensembl_gene_id: FTT_0160
symbol: nudH
gene_biotype: protein_coding
description:
  (Di)nucleoside polyphosphate hydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.


ensembl_gene_id: FTT_0161c
symbol: FTT_0161c
gene_biotype: protein_coding
description:
  Similar to Q8FXE8 PAP2 family protein from Brucella suis (325 aa). FASTA: opt: 314 Z-score: 375.8 E(): 4.8e-13 Smith-Waterman score: 314; 31.915identity in 188 aa overlap ORF ftt0161c.


ensembl_gene_id: FTT_0162
symbol: ampD
gene_biotype: protein_coding
description:
  Similar to Q88PQ9 N-acetyl-anhydromuramyl-L-alanine amidase ampD from Pseudomonas putida (190 aa). FASTA: opt: 623 Z-score: 809.4 E(): 3.4e-37 Smith-Waterman score: 623; 52.000 identity in 175 aa overlap.


ensembl_gene_id: FTT_0163c
symbol: parE
gene_biotype: protein_coding
description:
  Topoisomerase IV, subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily.


ensembl_gene_id: FTT_0164c
symbol: FTT_0164c
gene_biotype: protein_coding
description:
  Eflux protein; Similar to Q9KRK6 Multidrug resistance protein from Vibrio cholerae (401 aa). FASTA: opt: 579 Z-score: 614.0 E(): 2.6e-26 Smith-Waterman score: 579; 28.989identity in 376 aa overlap ORF ftt0164c.


ensembl_gene_id: FTT_0165c
symbol: bamB
gene_biotype: protein_coding
description:
  Conserved hypothetical lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: FTT_0166c
symbol: FTT_0166c
gene_biotype: protein_coding
description:
  Similar to Q8FF57 Hypothetical protein yfgM from E. coli (206 aa). FASTA: opt: 155 Z-score: 188.7 E(): 0.012 Smith-Waterman score: 188; 27.778 identity in 198 aa overlap ORF ftt0166c.


ensembl_gene_id: FTT_0167
symbol: hemA
gene_biotype: protein_coding
description:
  Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: FTT_0168
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: FTT_0169
symbol: prmC
gene_biotype: protein_coding
description:
  hemK protein homolog; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: FTT_0174
symbol: FTT_0174
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, pseudogene; Similar to Q87J48 Hypothetical protein from Vibro parahaemolyticus (305 aa). FASTA: opt: 1031 Z-score: 1265.1 E(): 1.3e-62 Smith-Waterman score: 1031; 52.365 identity in 296 aa overlap. Contains a frameshift after aa 227 and an in-frame stop aa at 267 ORF ftt0173.


ensembl_gene_id: FTT_0175c
symbol: FTT_0175c
gene_biotype: protein_coding
description:
  Similar to AAO80856 (Q836Q5) ABC transporter, ATP-binding protein (269 aa). FASTA: opt: 738 Z-score: 809.5 E(): 3.1e-37 Smith-Waterman score: 738; 43.137 identity in 255 aa overlap missing 90 aa at C-terminus ORF ftt0175c.


ensembl_gene_id: FTT_0177c
symbol: FTT_0177c
gene_biotype: protein_coding
description:
  ABC transporter, membrane protein, pseudogene; Similar to Q836Q4 ABC transporter, permease protein from Enterococcus faecalis (585 aa). FASTA: opt: 1474 Z-score: 1670.8 E(): 3.3e-85 Smith-Waterman score: 1476; 39.519identity in 582 aa overlap. Frameshift occurs at a heptanucleotide sequence and so could be part of a programmed translational frameshift ORF ftt0176c.


ensembl_gene_id: FTT_0178c
symbol: rimK
gene_biotype: protein_coding
description:
  Similar to Q9KPN3 Ribosomal protein S6 modification protein-related protein from Vibrio cholerae (483 aa). FASTA: opt: 1367 Z-score: 1648.7 E(): 6.1e-84 Smith-Waterman score: 1367; 43.149 identity in 489 aa overlap.


ensembl_gene_id: FTT_0180
symbol: FTT_0180
gene_biotype: protein_coding
description:
  Competence-related protein, pseudogene; Similar to CAD86320 (Q82SD2) DNA internalization-related competence protein ComEC/Rec2 from Nitrosomonas europaea (799 aa). FASTA: opt: 531 Z-score: 549.2 E(): 9.6e-23 Smith-Waterman score: 554; 23.668 identity in 638 aa overlap. Contains a frameshift after aa 225 ORF ftt0179.


ensembl_gene_id: FTT_0181c
symbol: FTT_0181c
gene_biotype: protein_coding
description:
  Conserved membrane protein; Similar to Q9X885 Putative small integral membrane protein from Streptomyces coelicolor (167 aa). FASTA: opt: 262 Z-score: 342.1 E(): 3.6e-11 Smith-Waterman score: 262; 30.723 identity in 166 aa overlap ORF ftt0181c.


ensembl_gene_id: FTT_0182c
symbol: FTT_0182c
gene_biotype: protein_coding
description:
  Sua5/YciO/YrdC family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-)/CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate.


ensembl_gene_id: FTT_0183c
symbol: rpsA
gene_biotype: protein_coding
description:
  30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.


ensembl_gene_id: FTT_0184
symbol: tadA
gene_biotype: protein_coding
description:
  Zinc-binding domain protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: FTT_0186
symbol: ftsQ
gene_biotype: protein_coding
description:
  Similar to Q83F15 Cell division protein FtsQ from Coxiella burnetii (243 aa). FASTA: opt: 291 Z-score: 355.4 E(): 6.6e-12 Smith-Waterman score: 291; 23.176 identity in 233 aa overlap.


ensembl_gene_id: FTT_0187
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: FTT_0188
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: FTT_0189
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: FTT_0190c
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III, gamma/tau subunits; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: FTT_0191
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: FTT_0192
symbol: lysU
gene_biotype: protein_coding
description:
  Similar to SYK2_ECOLI (P14825) Lysyl-tRNA synthetase, heat inducible, from E. coli (504 aa). FASTA: opt: 2003 Z-score: 2242.9 E(): 4.9e-117 Smith-Waterman score: 2003; 61.066 identity in 488 aa overlap; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: FTT_0193c
symbol: FTT_0193c
gene_biotype: protein_coding
description:
  Similar to Y208_VIBCH (Q9KVD8) Hypothetical protein VC0208 from Vibrio cholerae (162 aa). FASTA: opt: 414 Z-score: 528.5 E(): 1.5e-21 Smith-Waterman score: 414; 41.875 identity in 160 aa overlap ORF ftt0193c.


ensembl_gene_id: FTT_0194c
symbol: FTT_0194c
gene_biotype: protein_coding
description:
  Similar to Q8X898 Hypothetical 31.1 kDa protein (Hypothetical membrane protein) from E.coli (274 aa). FASTA: opt: 398 Z-score: 431.1 E(): 4e-16 Smith-Waterman score: 398; 26.429 identity in 280 aa overlap ORF ftt0194c.


ensembl_gene_id: FTT_0195c
symbol: glsA
gene_biotype: protein_coding
description:
  L-glutaminase; Similar to Q8IX91 L-glutaminase from Homo sapien (602 aa). FASTA: opt: 1441 Z-score: 1670.0 E(): 3.9e-85 Smith-Waterman score: 1441; 42.887 identity in 478 aa overlap ORF ftt0195c; Belongs to the glutaminase family.


ensembl_gene_id: FTT_0196c
symbol: glnA
gene_biotype: protein_coding
description:
  Similar to AAO90051 (Q83E31) Glutamine synthetase from Coxiella burnetti (359 aa). FASTA: opt: 1369 Z-score: 1705.1 E(): 4.4e-87 Smith-Waterman score: 1369; 59.226 identity in 336 aa overlap.


ensembl_gene_id: FTT_0197c
symbol: holA
gene_biotype: protein_coding
description:
  Similar to Q88DM9 DNA polymerase III, delta subunit from Pseudomonas putida (345 aa). FASTA: opt: 380 Z-score: 451.8 E(): 2.8e-17 Smith-Waterman score: 380; 28.707 identity in 317 aa overlap.


ensembl_gene_id: FTT_0198
symbol: blc
gene_biotype: protein_coding
description:
  Outer membrane lipoprotein; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids.


ensembl_gene_id: FTT_0203c
symbol: purH
gene_biotype: protein_coding
description:
  Similar to PUR9_RHIME (Q92KX6) Bifunctional purine biosynthesis purH from Rhizobium meliloti (536 aa). FASTA: opt: 1834 Z-score: 2200.5 E(): 1.1e-114 Smith-Waterman score: 1834; 55.344identity in 524 aa overlap Includes phosphoribosylaminoimidazolecarboxyamide formyltransferase and IMP synthetase.


ensembl_gene_id: FTT_0204
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: FTT_0205
symbol: hpt
gene_biotype: protein_coding
description:
  Similar to Q8R7L0 Hypoxanthine-guanine phosphoribosyltransferase from Thermoanaerobacter tengcogenesis (181 aa). FASTA: opt: 509 Z-score: 658.7 E(): 8.5e-29 Smith-Waterman score: 509; 47.337 identity in 169 aa overlap.


ensembl_gene_id: FTT_0207c
symbol: FTT_0207c
gene_biotype: protein_coding
description:
  Similar to AAO90632 (Q83CJ6) Dienelactone hydrolase family protein from Coxiella burnetti (237 aa). FASTA: opt: 718 Z-score: 895.1 E(): 5.2e-42 Smith-Waterman score: 718; 46.809 identity in 235 aa overlap. Contains a frameshift after aa 54. Frameshift occurs at a heptanucleotide sequence and so could be part of a programmed translational frameshift ORF ftt0206c.


ensembl_gene_id: FTT_0208c
symbol: FTT_0208c
gene_biotype: protein_coding
description:
  ABC transporter, ATP-binding protein; Similar to MNTB_BACSU (O34338) Manganese transport system ATP-binding protein mntB from Bacillus subtilis (250 aa). FASTA: opt: 365 Z-score: 426.7 E(): 7.1e-16 Smith-Waterman score: 365; 30.986 identity in 213 aa overlap ORF ftt0208c.


ensembl_gene_id: FTT_0209c
symbol: FTT_0209c
gene_biotype: protein_coding
description:
  Periplasmic solute binding family protein; Similar to Q88TE8 ABC transporter substrate binding protein from Lactobacillus plantarum (297 aa). FASTA: opt: 555 Z-score: 628.8 E(): 3.9e-27 Smith-Waterman score: 555; 30.935identity in 278 aa overlap ORF ftt0209c.


ensembl_gene_id: FTT_0211c
symbol: FTT_0211c
gene_biotype: protein_coding
description:
  Major facilitator superfamily (MFS) transport protein, pseudogene; Similar to AAO90981 (Q83BM0) Major facilitator family transporter from Coxiella burnetti (428 aa). FASTA: opt: 399 Z-score: 467.4 E(): 3.5e-18 Smith-Waterman score: 502; 25.307 identity in 407 aa overlap. Contains several stop codons ORF ftt0210c.


ensembl_gene_id: FTT_0212c
symbol: wrbA
gene_biotype: protein_coding
description:
  Similar to Q9I509 Trp repressor binding protein WrbA from Pseudomonas aeruginosa (198 aa). FASTA: opt: 727 Z-score: 948.0 E(): 6.5e-45 Smith-Waterman score: 727; 54.974 identity in 191 aa overlap; Belongs to the WrbA family.


ensembl_gene_id: FTT_0213
symbol: rbn
gene_biotype: protein_coding
description:
  Similar to RBN_ECOLI (P32146) tRNA processing ribonuclease BN from E. coli (290 aa). FASTA: opt: 535 Z-score: 578.5 E(): 2.5e-24 Smith-Waterman score: 535; 33.813 identity in 278 aa overlap.


ensembl_gene_id: FTT_0215
symbol: priA
gene_biotype: protein_coding
description:
  Transport protein, pseudogene; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: FTT_0219c
symbol: FTT_0219c
gene_biotype: protein_coding
description:
  Cytochrome b561 family protein, pseudogene; Similar to Q9I539 Cytochrome b561 from Pseudomonas aeruginosa (182 aa). FASTA: opt: 265 Z-score: 332.5 E(): 1.3e-10 Smith-Waterman score: 265; 30.357 identity in 168 aa overlap. Contains an in-frame stop codon after aa 50 ORF ftt0218c.


ensembl_gene_id: FTT_0220c
symbol: FTT_0220c
gene_biotype: protein_coding
description:
  Similar to Q8XMV6 Hypothetical protein CPE0582 from Clostridium perfringens (210 aa). FASTA: opt: 207 Z-score: 248.6 E(): 5.9e-06 Smith-Waterman score: 207; 24.883 identity in 213 aa overlap ORF ftt0220c.


ensembl_gene_id: FTT_0222c
symbol: ybgK
gene_biotype: protein_coding
description:
  Hydrolase subunit; Similar to YBGK_HAEIN (P44298) Hypothetical protein HI1730 from Haemophilus influenzae (309 aa). FASTA: opt: 308 Z-score: 386.7 E(): 1.2e-13 Smith-Waterman score: 352; 32.453 identity in 265 aa overlap.


ensembl_gene_id: FTT_0223c
symbol: ybgL
gene_biotype: protein_coding
description:
  Lactam utilization protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.


ensembl_gene_id: FTT_0226c
symbol: isftu1-7
gene_biotype: protein_coding
description:
  Major facilitator superfamily (MFS) transport protein, fragment; ISFtu1 12bp terminal inverted repeat.


ensembl_gene_id: FTT_0228c
symbol: orn
gene_biotype: protein_coding
description:
  Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family.


ensembl_gene_id: FTT_0229c
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family.


ensembl_gene_id: FTT_0230c
symbol: FTT_0230c
gene_biotype: protein_coding
description:
  Type IV pili fiber building block protein; Similar to Q87B50 Type IV pilin from Xylella fastidiosa (142 aa). FASTA: opt: 224 Z-score: 300.3 E(): 7.8e-09 Smith-Waterman score: 224; 32.090 identity in 134 aa overlap The pili fiber building block protein has a highly distinct primary structure; a short positively charged leader sequence, and a highly conserved and highly hydrophobic amino-terminal domain which forms the core of the pilus fiber; A variety of studies suggest that the invariant glycine (G) at -1 is required for prepilin cleavage and assembly and that the glutamate (E) at + 5 [...]


ensembl_gene_id: FTT_0231c
symbol: htrB
gene_biotype: protein_coding
description:
  Acyltransferase; Similar to HTRB_ECOLI (P24187) Lipid A biosynthesis lauroyl acyltransferase from E. coli (306 aa). FASTA: opt: 542 Z-score: 697.7 E(): 5.7e-31 Smith-Waterman score: 542; 32.895 identity in 304 aa overlap (8-307:14-306) n.b.Paralog of FTT0232c.


ensembl_gene_id: FTT_0232c
symbol: ddg
gene_biotype: protein_coding
description:
  Acyltransferase; Similar to Q8ZNA3 (Q8ZNA3) Cold shock-induced palmitoleoyl transferase from Salmonella typhimurium (306 aa). FASTA: opt: 629 Z-score: 782.5 E(): 1.1e-35 Smith-Waterman score: 629; 36.755 identity in 302 aa overlap Paralog of FTT0231c.


ensembl_gene_id: FTT_0233c
symbol: yidC
gene_biotype: protein_coding
description:
  Inner-membrane protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: FTT_0234c
symbol: FTT_0234c
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: FTT_0235c
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: FTT_0236c
symbol: rpmH
gene_biotype: protein_coding
description:
  Similar to Q8EKT3 Ribosomal protein L34 from Shewanella oneidensis (45 aa). FASTA: opt: 226 Z-score: 374.4 E(): 5.8e-13 Smith-Waterman score: 226; 79.070 identity in 43 aa overlap; Belongs to the bacterial ribosomal protein bL34 family.


ensembl_gene_id: FTT_0238
symbol: aroE1
gene_biotype: protein_coding
description:
  Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: FTT_0240
symbol: rsmI
gene_biotype: protein_coding
description:
  Tetrapyrrole methyltransferase family protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: FTT_0242
symbol: FTT_0242
gene_biotype: protein_coding
description:
  Similar to Q83DS9 Hypothetical protein CBU0616 from Coxiella burnetii (196 aa). FASTA: opt: 376 Z-score: 484.1 E(): 4.5e-19 Smith-Waterman score: 376; 37.634 identity in 186 aa overlap ORF ftt0242.


ensembl_gene_id: FTT_0243
symbol: FTT_0243
gene_biotype: protein_coding
description:
  Hypothetical membrane protein; Weak similarity to M. musculus protein,1700056O17 Rik protein (233 aa) ORF ftt0243.


ensembl_gene_id: FTT_0244
symbol: FTT_0244
gene_biotype: protein_coding
description:
  Similar to Q8R5Z3 DNA/RNA helicase (DEAD/DEAH box family) from Fusobacterium nucleatum (942 aa). FASTA: opt: 2318 Z-score: 2654.5 E(): 5.8e-140 Smith-Waterman score: 2473; 45.087 identity in 916 aa overlap ORF ftt0244.


ensembl_gene_id: FTT_0245
symbol: usp
gene_biotype: protein_coding
description:
  Similar to Q8PWX4 Universal stress protein from Methanosarcina maizae (323 aa). FASTA: opt: 347 Z-score: 418.2 E(): 2.1e-15 Smith-Waterman score: 347; 31.849 identity in 292 aa overlap.


ensembl_gene_id: FTT_0249
symbol: feoB
gene_biotype: protein_coding
description:
  Ferrous iron transport protein; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: FTT_0250
symbol: ppdK
gene_biotype: protein_coding
description:
  Similar to Q8RB43 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase from Thermoanaerobacter tengcongensis (875 aa). FASTA: opt: 3545 Z-score: 4080.1 E(): 0 Smith-Waterman score: 3545; 61.812 identity in 872 aa overlap; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: FTT_0251
symbol: ilvE
gene_biotype: protein_coding
description:
  Branched-chain amino acid aminotransferase protein (class IV); Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: FTT_0252
symbol: leuA
gene_biotype: protein_coding
description:
  Similar to Q9C5X5 2-isopropylmalate synthase from Arabidopsis thaliana (503 aa). FASTA: opt: 493 Z-score: 601.2 E(): 1.4e-25 Smith-Waterman score: 635; 31.373 identity in 408 aa overlap. This CDS is disrupted by the insertion of an ISFtu1 element occurring very near the C-terminal end. It is not clear whether this insertion affects the function of the protein.


ensembl_gene_id: FTT_0256c
symbol: FTT_0256c
gene_biotype: protein_coding
description:
  Similar to Q87T79 Putative lipopolysaccharide A protein from Vibrio parahaemolyticus (311 aa). FASTA: opt: 835 Z-score: 996.3 E(): 1.3e-47 Smith-Waterman score: 910; 43.671 identity in 316 aa overlap ORF ftt0256c.


ensembl_gene_id: FTT_0257
symbol: FTT_0257
gene_biotype: protein_coding
description:
  Similar to Q8YNW1 Ribonuclease II family protein from Anabaena sp. (686 aa). FASTA: opt: 557 Z-score: 649.1 E(): 2.9e-28 Smith-Waterman score: 763; 28.290 identity in 661 aa overlap ORF ftt0257.


ensembl_gene_id: FTT_0258
symbol: FTT_0258
gene_biotype: protein_coding
description:
  Similar to Q83AC9 Carboxylesterase/phospholipase family protein from Coxiella burnetii (200 aa). FASTA: opt: 599 Z-score: 736.0 E(): 4.2e-33 Smith-Waterman score: 599; 45.813 identity in 203 aa overlap ORF ftt0258.


ensembl_gene_id: FTT_0259
symbol: hemC
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase (porphobilinogen deaminase); Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: FTT_0260
symbol: crcB
gene_biotype: protein_coding
description:
  CrcB family protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: FTT_0261
symbol: FTT_0261
gene_biotype: protein_coding
description:
  Hypothetical membrane protein; The predicted signal peptide are in conflict with the membrane lipoprotein lipid attachment site ORF ftt0261.


ensembl_gene_id: FTT_0262
symbol: FTT_0262
gene_biotype: protein_coding
description:
  Hypothetical lipoprotein; The predicted signal peptide and the membrane lipoprotein lipid attachment site are in conflict with each other ORF ftt0262.


ensembl_gene_id: FTT_0264c
symbol: FTT_0264c
gene_biotype: protein_coding
description:
  Similar to Q8Y1X1 Hypothetical protein RSc0566 from Ralstonia solancearum (65 aa). FASTA: opt: 160 Z-score: 236.6 E(): 2.5e-05 Smith-Waterman score: 160; 50.000 identity in 36 aa overlap ORF ftt0264c.


ensembl_gene_id: FTT_0265
symbol: FTT_0265
gene_biotype: protein_coding
description:
  Similar to Q83AV7 ABC transporter,permease protein from Coxiella burnetii (581 aa). FASTA: opt: 976 Z-score: 1115.9 E(): 2.9e-54 Smith-Waterman score: 1738; 45.318 identity in 598 aa overlap ORF ftt0265.


ensembl_gene_id: FTT_0266
symbol: FTT_0266
gene_biotype: protein_coding
description:
  Similar to Q83AV8 ABC transporter, ATP-binding protein from Coxiella burnetii (432 aa). FASTA: opt: 1556 Z-score: 1713.5 E(): 1.5e-87 Smith-Waterman score: 1556; 54.673 identity in 428 aa overlap ORF ftt0266.


ensembl_gene_id: FTT_0268
symbol: FTT_0268
gene_biotype: protein_coding
description:
  Similar to Q88MV1 Sodium/hydrogen exchanger family protein from Pseudomonas putida (601 aa). FASTA: opt: 1318 Z-score: 1419.4 E(): 3.6e-71 Smith-Waterman score: 1318; 37.993 identity in 608 aa overlap ORF ftt0268.


ensembl_gene_id: FTT_0269
symbol: FTT_0269
gene_biotype: protein_coding
description:
  Similar to Q8EKP8 Carbonic anhydrase,family 3 from Shewanella oneidensis (182 aa). FASTA: opt: 639 Z-score: 840.8 E(): 6.1e-39 Smith-Waterman score: 639; 50.000 identity in 178 aa overlap ORF ftt0269.


ensembl_gene_id: FTT_0270
symbol: lolB
gene_biotype: protein_coding
description:
  Lipoprotein releasing system, subunit B, outer membrane lipoprotein; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.


ensembl_gene_id: FTT_0271
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: FTT_0277c
symbol: FTT_0277c
gene_biotype: protein_coding
description:
  Similar to Q89LI3 Probable cyclohexadienyl dehydratase precusor from Bradyrhizobium japonicum (260 aa). FASTA: opt: 349 Z-score: 407.8 E(): 7.3e-15 Smith-Waterman score: 349; 30.841 identity in 214 aa overlap. Contains a frameshift after aa 73 ORF ftt0276c.


ensembl_gene_id: FTT_0278c
symbol: cydB
gene_biotype: protein_coding
description:
  Similar to AAO69749 (Q8XGM0) Cytochrome d ubiquinol oxidase subunit II from Salmonella typhi (379 aa). FASTA: opt: 645 Z-score: 711.2 E(): 1e-31 Smith-Waterman score: 1022; 40.506identity in 395 aa overlap.


ensembl_gene_id: FTT_0279c
symbol: cydA
gene_biotype: protein_coding
description:
  Similar to AAP96534 (Q7VKT6) Cytochrome D ubiquinol oxidase, subunit I from Haemophilus ducreyi (516 aa). FASTA: opt: 1311 Z-score: 1457.7 E(): 2.7e-73 Smith-Waterman score: 1688; 47.478identity in 575 aa overlap Schu S4 seems to have extra sequence in between 340-420 aa.


ensembl_gene_id: FTT_0280c
symbol: yajR
gene_biotype: protein_coding
description:
  Similar to AAO89830 (Q83EP3) Major facilitator family transporter from Coxiella burnetii (458 aa). FASTA: opt: 1379 Z-score: 1410.6 E(): 1.1e-70 Smith-Waterman score: 1379; 46.102 identity in 449 aa overlap.


ensembl_gene_id: FTT_0281
symbol: cyoA
gene_biotype: protein_coding
description:
  Similar to Q87DQ7 Cytochrome O ubiquinol oxidase subunit II from Xylella fastidiosa (319 aa). FASTA: opt: 956 Z-score: 1145.6 E(): 6.4e-56 Smith-Waterman score: 956; 49.477 identity in 287 aa overlap.


ensembl_gene_id: FTT_0282
symbol: cyoB
gene_biotype: protein_coding
description:
  Similar to AAO70008 (Q8XG02) Cytochrome o ubiquinol oxidase subunit I from Salmonella typhi (663 aa). FASTA: opt: 3045 Z-score: 3221.2 E(): 1.6e-171 Smith-Waterman score: 3045; 64.361identity in 665 aa overlap; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: FTT_0283
symbol: cyoC
gene_biotype: protein_coding
description:
  Similar to Q87IH7 Cytochrome o ubiquinol oxidase, subunit III from Vibrio parahaemolyticus (200 aa). FASTA: opt: 768 Z-score: 931.9 E(): 5.1e-44 Smith-Waterman score: 768; 55.276identity in 199 aa overlap.


ensembl_gene_id: FTT_0284
symbol: cyoD
gene_biotype: protein_coding
description:
  Similar to Q8ZC55 Cytochrome O ubiquinol oxidase subunit IV from Yersinia pestis (110 aa). FASTA: opt: 325 Z-score: 419.7 E(): 1.7e-15 Smith-Waterman score: 325; 50.505 identity in 99 aa overlap.


ensembl_gene_id: FTT_0285
symbol: cyoE
gene_biotype: protein_coding
description:
  Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.


ensembl_gene_id: FTT_0286c
symbol: lpxD2
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: FTT_0287c
symbol: FTT_0287c
gene_biotype: protein_coding
description:
  Similar to Q8XIW2 Hypothetical protein CPE2001 from Clostridium perfringens (229 aa). FASTA: opt: 806 Z-score: 994.2 E(): 1.7e-47 Smith-Waterman score: 806; 51.948 identity in 231 aa overlap ORF ftt0287c.


ensembl_gene_id: FTT_0288c
symbol: pdxY
gene_biotype: protein_coding
description:
  Similar to Q8D4Q2 Pyridoxal/pyridoxine/pyridoxamine kinase from Vibrio vulnificus (290 aa). FASTA: opt: 611 Z-score: 766.0 E(): 8.9e-35 Smith-Waterman score: 611; 38.545identity in 275 aa overlap.


ensembl_gene_id: FTT_0290
symbol: moxR
gene_biotype: protein_coding
description:
  Methanol dehydrogenase regulatory protein; Similar to Q87YN6 MoxR protein, putative, from Pseudomonas syringae (319 aa). FASTA: opt: 1309 Z-score: 1518.5 E(): 9.9e-77 Smith-Waterman score: 1309; 61.489 identity in 309 aa overlap.


ensembl_gene_id: FTT_0291
symbol: FTT_0291
gene_biotype: protein_coding
description:
  Similar to Q87YN5 Conserved hypothetical protein from Pseudomonas syringae (314 aa). FASTA: opt: 561 Z-score: 693.3 bits: 136.4 E(): 1e-30 Smith-Waterman score: 561; 30.479 identity in 292 aa overlap ORF ftt0291.


ensembl_gene_id: FTT_0292
symbol: FTT_0292
gene_biotype: protein_coding
description:
  Similar to Q8D3W9 Conserved hypothetical protein from Vibrio vulnificus (156 aa). FASTA: opt: 228 Z-score: 276.8 E(): 1.5e-07 Smith-Waterman score: 228; 28.481 identity in 158 aa overlap ORF ftt0292.


ensembl_gene_id: FTT_0293
symbol: FTT_0293
gene_biotype: protein_coding
description:
  Hypothetical membrane protein; Similar to Q88LA6 Von Willebrand factor type A domain protein from Pseuodmonas putida (358 aa). FASTA: opt: 905 Z-score: 1015.4 E(): 1.1e-48 Smith-Waterman score: 905; 45.122 identity in 328 aa overlap ORF ftt0293.


ensembl_gene_id: FTT_0295
symbol: FTT_0295
gene_biotype: protein_coding
description:
  Similar to Q8ECP1 TPR domain protein from Shewanella oneidensis (679 aa). FASTA: opt: 1173 Z-score: 1061.1 E(): 3e-51 Smith-Waterman score: 1179; 32.305 identity in 616 aa overlap. Contains a frameshift after aa 332 This protein also has a match to Q93EJ8 Hypothetical 27.1 kDa protein from Francisella tularensis (231 aa). FASTA: opt: 1485 Z-score: 1347.0 E(): 3.5e-67 Smith-Waterman score: 1485; 96.943 identity in 229 aa overlap. This protein was originally incorrectly sequenced (Pubmed: 11526142) (direct communication with authors). C-terminal contains multiple 9bp tandem repeats ORF f [...]


ensembl_gene_id: FTT_0296
symbol: pcp
gene_biotype: protein_coding
description:
  Pyrrolidone-carboxylate peptidase; Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family.


ensembl_gene_id: FTT_0298
symbol: holC
gene_biotype: protein_coding
description:
  Similar to Q8XWQ9 Probable DNA polymerase III (CHI subunit) protein from Ralstonia solanacearum (142 aa). FASTA: opt: 142 Z-score: 187.9 E(): 0.013 Smith-Waterman score: 142; 30.000identity in 120 aa overlap.


ensembl_gene_id: FTT_0299
symbol: valS
gene_biotype: protein_coding
description:
  Valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: FTT_0303c
symbol: lldD1
gene_biotype: protein_coding
description:
  Similar to Q9JTX1 L-lactate dehydrogenase from Neisseria meningitidis (390 aa). FASTA: opt: 1591 Z-score: 1977.5 E(): 3e-102 Smith-Waterman score: 1591; 60.789 identity in 380 aa overlap.


ensembl_gene_id: FTT_0304c
symbol: nfnB
gene_biotype: protein_coding
description:
  Similar to Q87FT7 Oxygen-insensitive NAD(P)H nitroreductase from Vibrio parahaemolyticus (217 aa). FASTA: opt: 753 Z-score: 968.9 E(): 4.5e-46 Smith-Waterman score: 753; 51.152 identity in 217 aa overlap.


ensembl_gene_id: FTT_0305
symbol: FTT_0305
gene_biotype: protein_coding
description:
  Similar to Q88NZ1 MutT/nudix family protein from Pseuodomonas putida (137 aa). FASTA: opt: 224 Z-score: 293.2 E(): 1.8e-08 Smith-Waterman score: 224; 34.545 identity in 110 aa overlap ORF ftt0305; Belongs to the Nudix hydrolase family.


ensembl_gene_id: FTT_0306
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarate hydratase, Class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: FTT_0307
symbol: gltX
gene_biotype: protein_coding
description:
  Glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).


ensembl_gene_id: FTT_0310
symbol: FTT_0310
gene_biotype: protein_coding
description:
  Similar to Q8XT33 Probable amino-acid permease transmembrane protein from Ralstonia solanacearum (543 aa). FASTA: opt: 999 Z-score: 1146.0 E(): 5.5e-5 Smith-Waterman score: 999; 34.924 identity in 461 aa overlap ORF ftt0310.


ensembl_gene_id: FTT_0311c
symbol: FTT_0311c
gene_biotype: protein_coding
description:
  Similar to Q9KKV6 Hypothetical protein VCA0994 from Vibrio cholerae (326 aa). FASTA: opt: 558 Z-score: 686.8 E(): 2.3e-30 Smith-Waterman score: 558; 31.949 identity in 313 aa overlap ORF ftt0311c.


ensembl_gene_id: FTT_0312c
symbol: folA
gene_biotype: protein_coding
description:
  Dihydrofolate reductase type I; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.


ensembl_gene_id: FTT_0313
symbol: rpsB
gene_biotype: protein_coding
description:
  Similar to RS2_SPIPL (P34831) 30S ribosomal protein S2 from Spirulina platensis (251 aa). FASTA: opt: 953 Z-score: 1141.6 E(): 1.1e-55 Smith-Waterman score: 953; 61.364 identity in 220 aa overlap; Belongs to the universal ribosomal protein uS2 family.


ensembl_gene_id: FTT_0314
symbol: tsf
gene_biotype: protein_coding
description:
  Protein chain elongation factor EF-Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: FTT_0316
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: FTT_0317
symbol: uppS
gene_biotype: protein_coding
description:
  Undecaprenyl pyrophosphate synthetase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di- trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide.


ensembl_gene_id: FTT_0318
symbol: cdsA
gene_biotype: protein_coding
description:
  Similar to Q88MH5 Phosphatidate cytidylyltransferase from Pseudomonas putida (271 aa). FASTA: 398 opt: 534 Z-score: 626.6 E(): 5.2e-27 Smith-Waterman score: 536; 35.926 identity in 270 aa overlap; Belongs to the CDS family.


ensembl_gene_id: FTT_0319
symbol: dut
gene_biotype: protein_coding
description:
  dUTP pyrophosphatase (Deoxyuridine 5'-triphosphate nucleotidohydrolase); This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: FTT_0320
symbol: pgsA
gene_biotype: protein_coding
description:
  Similar to Q8XFD0 Phosphotidylglycerophosphate synthetase from Salmonella typhi (182 aa). FASTA: opt: 575 Z-score: 728.4 E(): 1.1e-32 Smith-Waterman score: 618; 50.000identity in 188 aa overlap; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: FTT_0322
symbol: rpsG
gene_biotype: protein_coding
description:
  30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: FTT_0323
symbol: fusA
gene_biotype: protein_coding
description:
  Elongation factor G (EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: FTT_0324
symbol: rpsJ
gene_biotype: protein_coding
description:
  30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: FTT_0325
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.


ensembl_gene_id: FTT_0326
symbol: rplD
gene_biotype: protein_coding
description:
  50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.


ensembl_gene_id: FTT_0327
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: FTT_0328
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: FTT_0329
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: FTT_0330
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity).


ensembl_gene_id: FTT_0331
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: FTT_0332
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: FTT_0333
symbol: rpmC
gene_biotype: protein_coding
description:
  Similar to RL29_VIBCH (Q9KNZ2) 50S ribosomal protein L29 from Vibrio cholerae (63 aa). FASTA: opt: 190 Z-score: 279.3 E(): 1.2e-07 Smith-Waterman score: 190; 45.614 identity in 57 aa overlap; Belongs to the universal ribosomal protein uL29 family.


ensembl_gene_id: FTT_0334
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: FTT_0335
symbol: rplN
gene_biotype: protein_coding
description:
  50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: FTT_0336
symbol: rplX
gene_biotype: protein_coding
description:
  50S ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.


ensembl_gene_id: FTT_0337
symbol: rplE
gene_biotype: protein_coding
description:
  50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: FTT_0338
symbol: rpsN
gene_biotype: protein_coding
description:
  30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.


ensembl_gene_id: FTT_0339
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: FTT_0340
symbol: rplF
gene_biotype: protein_coding
description:
  50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: FTT_0341
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: FTT_0342
symbol: rpsE
gene_biotype: protein_coding
description:
  30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: FTT_0343
symbol: rpmD
gene_biotype: protein_coding
description:
  Similar to Q9JQT4 (Q9JQT4) 50S ribosomal protein L30 from Neisseria meningitidis (61 aa). FASTA: opt: 259 Z-score: 408.8 E(): 7e-15 Smith-Waterman score: 259; 68.333 identity in 60 aa overlap.


ensembl_gene_id: FTT_0344
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: FTT_0345
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase, subunit Y, membrane protein; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: FTT_0346
symbol: rpmJ
gene_biotype: protein_coding
description:
  Similar to AAP96675 (Q7VKF4) 50S ribosomal protein L36 from Haemophilus ducreyi (37 aa). FASTA: opt: 231 Z-score: 329.3 E(): 1.9e-10 Smith-Waterman score: 231; 86.486 identity in 37 aa overlap; Belongs to the bacterial ribosomal protein bL36 family.


ensembl_gene_id: FTT_0347
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: FTT_0348
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: FTT_0349
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: FTT_0350
symbol: rpoA1
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: FTT_0351
symbol: rplQ
gene_biotype: protein_coding
description:
  Similar to Q8DS37 50S ribosomal protein L17 from Streptococcus mutans (128 aa). FASTA: opt: 342 Z-score: 447.1 E(): 5.2e-17 Smith-Waterman score: 342; 50.000 identity in 128 aa overlap.


ensembl_gene_id: FTT_0354
symbol: isftu2-4
gene_biotype: protein_coding
description:
  ISFtu2, fragment. Transposase, member of the IS5 family. Identical to Q8GM03 putative transposase from Francisella tularensis (247 aa) over 156 aa. Only the carboxy terminal is present and that is disrupted by the insertion of ISFtu1 element resulting in 7 carboxyl aa missing.


ensembl_gene_id: FTT_0359
symbol: FTT_0359
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, psuedogene; Similar to Q9I5X7 Hypothetical protein PA0559 from Pseudomonas aeruginosa (392 aa). FASTA: opt: 1403 Z-score: 1598.9 E(): 3.3e-81 Smith-Waterman score: 1403; 54.090identity in 379 aa overlap. This CDS contains no start codon due to an insertion of an ISFtu1 element as well as a frameshift and two in-frame stop codons. ORF ftt0358.


ensembl_gene_id: FTT_0360
symbol: FTT_0360
gene_biotype: protein_coding
description:
  Similar to Q82V84 Short-chain dehydrogenase/reductase (SDR) superfamily from Nitrosomonas europaea (279 aa). FASTA: opt: 829 Z-score: 982.8 E(): 7.5e-47 Smith-Waterman score: 829; 49.632 identity in 272 aa overlap ORF ftt0360; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: FTT_0361c
symbol: FTT_0361c
gene_biotype: protein_coding
description:
  Similar to Q8Z506 Putative amino acid transporter from Salmonella typhi (473 aa). FASTA: opt: 717 Z-score: 754.8 E(): 3.8e-34 Smith-Waterman score: 755; 29.783 identity in 460 aa overlap ORF ftt0361c.


ensembl_gene_id: FTT_0365
symbol: poxF
gene_biotype: protein_coding
description:
  Similar to Q8PFB8 Phenol hydroxylase from Xanthomonas axonopodis (365 aa). FASTA: opt: 567 Z-score: 717.5 E(): 4.5e-32 Smith-Waterman score: 567; 38.211 identity in 246 aa overlap The protein seems to be shorter (<115 aa) than the matching proteins.


ensembl_gene_id: FTT_0367c
symbol: gshA
gene_biotype: protein_coding
description:
  Similar to Q88AR1 Glutamate--cysteine ligase from Pseudomonas syringae (529 aa). FASTA: opt: 1113 Z-score: 1281.1 E(): 1.8e-63 Smith-Waterman score: 1113; 39.250 identity in 507 aa overlap; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.


ensembl_gene_id: FTT_0368c
symbol: mviN
gene_biotype: protein_coding
description:
  Virulence factor MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: FTT_0370c
symbol: yjeE
gene_biotype: protein_coding
description:
  Nucleotide-binding protein, yjeE; Similar to Q8Z189 Hypothetical protein yjeE from Salmonella typhi (153 aa). FASTA: opt: 517 Z-score: 623.3 E(): 7.9e-27 Smith-Waterman score: 517; 56.489 identity in 131 aa overlap.


ensembl_gene_id: FTT_0371c
symbol: folC
gene_biotype: protein_coding
description:
  Similar to Q8ECR5 FolC bifunctional protein from Shewanella oneidensis (431 aa). FASTA: opt: 507 Z-score: 630.2 E(): 3.3e-27 Smith-Waterman score: 627; 32.274 identity in 409 aa overlap.


ensembl_gene_id: FTT_0372c
symbol: accD
gene_biotype: protein_coding
description:
  Acetyl-CoA carboxylase beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: FTT_0373c
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: FTT_0374c
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: FTT_0376c
symbol: FTT_0376c
gene_biotype: protein_coding
description:
  S-transferase; Similar to YFCC_ECOLI (P39263) Hypothetical protein yfcC from E. coli (506 aa). FASTA: opt: 1158 Z-score: 1316.5 E(): 1.8e-65 Smith-Waterman score: 1398; 42.656 identity in 497 aa overlap. Contains an in-frame stop aa after codon 283 and an internal in-frame deletion according to FASTA hits ORF ftt0375.


ensembl_gene_id: FTT_0380c
symbol: gdh
gene_biotype: protein_coding
description:
  Transposase, fragment; ISFtu1 12bp terminal inverted repeat; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: FTT_0384c
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase proenzyme; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: FTT_0386
symbol: nadM
gene_biotype: protein_coding
description:
  Similar to NADM_SYNY3 (Q55928) Bifunctional NMN adenylyltransferase/NUDIX hydrolase from Synechocytis sp. (339 aa). FASTA: opt: 766 Z-score: 937.1 E(): 2.6e-44 Smith-Waterman score: 766; 37.168 identity in 339 aa overlap.


ensembl_gene_id: FTT_0387
symbol: glmU
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. In the C-terminal section; belongs to the tra [...]


ensembl_gene_id: FTT_0388
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: FTT_0389
symbol: FTT_0389
gene_biotype: protein_coding
description:
  Acetyltransferase; Similar to Q9RWR2 Acetyltransferase, putative, from Deinococcus radiodurans (188 aa). FASTA: opt: 188 Z-score: 245.7 E(): 8.5e-06 Smith-Waterman score: 188; 28.105 identity in 153 aa overlap ORF ftt0389.


ensembl_gene_id: FTT_0390c
symbol: rpsU1
gene_biotype: protein_coding
description:
  Similar to RS21_VIBCH (Q9KUJ9) 30S ribosomal protein S21 from Vibrio cholera (71 aa). FASTA: opt: 212 Z-score: 304.1 E(): 4.8e-09 Smith-Waterman score: 212; 55.224 identity in 67 aa overlap; Belongs to the bacterial ribosomal protein bS21 family.


ensembl_gene_id: FTT_0391c
symbol: cspC
gene_biotype: protein_coding
description:
  Similar to Q8D6M5 Cold shock protein from Vibrio vulnificus (70 aa). FASTA: opt: 272 Z-score: 403.6 E(): 1.4e-14 Smith-Waterman score: 272; 58.571 identity in 70 aa overlap.


ensembl_gene_id: FTT_0392c
symbol: FTT_0392c
gene_biotype: protein_coding
description:
  Similar to Q8TT97 Hypothetical protein MA0540 from Methanosarcina mazei (95 aa). FASTA: opt: 151 Z-score: 197.5 E(): 0.0038 Smith-Waterman score: 151; 35.789 identity in 95 aa overlap ORF ftt0392c.


ensembl_gene_id: FTT_0393
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: FTT_0395
symbol: FTT_0395
gene_biotype: protein_coding
description:
  Similar to Q9L5J1 hypothetical protein from Salmonella typhi (259 aa). FASTA: opt: 585 Z-score: 707.5 E(): 1.6e-31 Smith-Waterman score: 680; 46.743 identity in 261 aa overlap ORF ftt0395.


ensembl_gene_id: FTT_0396
symbol: parC
gene_biotype: protein_coding
description:
  DNA topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.


ensembl_gene_id: FTT_0397
symbol: mtn
gene_biotype: protein_coding
description:
  5'-methylthioadenosine\S-adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.


ensembl_gene_id: FTT_0399c
symbol: FTT_0399c
gene_biotype: protein_coding
description:
  Similar to Q885D8 BNR/Asp-box repeat protein from Pseudomonas syringae (432 aa). FASTA: opt: 536 Z-score: 654.4 E(): 1.5e-28 Smith-Waterman score: 536; 31.922 identity in 307 aa overlap ORF ftt0399c.


ensembl_gene_id: FTT_0400
symbol: slt
gene_biotype: protein_coding
description:
  Similar to Q88L07 Soluble lytic transglycosylase, putative from Pseudomonas putida (657 aa). FASTA: opt: 596 Z-score: 646.0 E(): 3.9e-28 Smith-Waterman score: 819; 27.822 identity in 629 aa overlap.


ensembl_gene_id: FTT_0401
symbol: FTT_0401
gene_biotype: protein_coding
description:
  Hypothetical protein; Partial homology to carboxy terminus of Q9CLV4a Hypothetical protein PM1097 from Pasteurella multocida (417 aa). FASTA: opt: 269 Z-score: 330.3 E(): 1.7e-10 Smith-Waterman score: 269; 26.050identity in 238 aa overlap ORF ftt0401.


ensembl_gene_id: FTT_0402
symbol: dnaE
gene_biotype: protein_coding
description:
  Similar to DP3A_SALTY (P14567) DNA polymerase III alpha subunit from Salmonella typhimurium (1160 aa). FASTA: opt: 3099 Z-score: 3288.3 E(): 2.6e-175 Smith-Waterman score: 3099; 44.781identity in 1121 aa overlap.


ensembl_gene_id: FTT_0403
symbol: def1
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: FTT_0404
symbol: lolC
gene_biotype: protein_coding
description:
  Lipoprotein releasing system, subunit C,putative membrane protein; Similar to Q83CV1 Putative lipoprotein ABC transporter,permease protein from Coxiella burnetii (414 aa). FASTA: opt: 1273 Z-score: 1436.4 E(): 4.1e-72 Smith-Waterman score: 1273; 48.104 identity in 422 aa overlap.


ensembl_gene_id: FTT_0405
symbol: lolD
gene_biotype: protein_coding
description:
  Lipoprotein releasing system, subunit D, ABC transporter, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.


ensembl_gene_id: FTT_0406
symbol: cadA
gene_biotype: protein_coding
description:
  Similar to DCLY_ECOLI (P23892) Lysine decarboxylase, inducible from E. coli (715 aa) FASTA: opt: 2608 Z-score: 3095.0 E(): 1.7e-164 Smith-Waterman score: 2608; 53.912 identity in 703 aa overlap.


ensembl_gene_id: FTT_0407
symbol: gcvT
gene_biotype: protein_coding
description:
  Glycine cleavage complex protein T (aminomethyltransferase); The glycine cleavage system catalyzes the degradation of glycine.


ensembl_gene_id: FTT_0408
symbol: gcvH1
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: FTT_0409
symbol: gcvP1
gene_biotype: protein_coding
description:
  Glycine cleavage system P protein, subunit 1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.


ensembl_gene_id: FTT_0410
symbol: gcvP2
gene_biotype: protein_coding
description:
  Similar to Q83B09 Putative glycine cleavage system P protein, subunit 2 from Coxiella burnetii (491 aa). FASTA: opt: 2055 Z-score: 2482.9 E(): 2.1e-130 Smith-Waterman score: 2055; 63.071identity in 482 aa overlap.


ensembl_gene_id: FTT_0411c
symbol: aroE2
gene_biotype: protein_coding
description:
  Similar to Q8FQC7 Putative shikimate 5-dehydrogenase from Corynebacterium efficiens(269 aa). FASTA: opt: 283 Z-score: 321.7 E(): 4.6e-10 Smith-Waterman score: 287; 28.077 identity in 260 aa overlap.


ensembl_gene_id: FTT_0412c
symbol: pulB
gene_biotype: protein_coding
description:
  Pullulonase; Similar to Q8XK16 Pullulanase from Clostridium perfringens (1064 aa). FASTA: opt: 3419 Z-score: 3958.4 E(): 1.4e-212 Smith-Waterman score: 3419; 48.369identity in 1042 aa overlap Other FASTA hits have lower scores due to generally being smaller in size. Q8XK16 is an electronic annotation; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: FTT_0413c
symbol: glgB
gene_biotype: protein_coding
description:
  1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: FTT_0414
symbol: pgm
gene_biotype: protein_coding
description:
  Similar to Q985P1 Phosphoglucomutase from Rhizobium loti (542 aa). FASTA: opt: 2295 Z-score: 2680.5 E(): 2.1e-141 Smith-Waterman score: 2295; 61.694 identity in 543 aa overlap.


ensembl_gene_id: FTT_0416
symbol: glgA
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase,pseudogene; Synthesizes alpha-1,4-glucan chains using ADP-glucose.


ensembl_gene_id: FTT_0417
symbol: malP
gene_biotype: protein_coding
description:
  Maltodextrin phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: FTT_0418
symbol: malA
gene_biotype: protein_coding
description:
  Similar to Q8XHY6 4-alpha-glucanotransferase from Clostridium perfringens (497 aa). FASTA: opt: 1343 Z-score: 1590.1 E(): 1.1e-80 Smith-Waterman score: 1343; 41.344 identity in 491 aa overlap.


ensembl_gene_id: FTT_0419
symbol: glyQ
gene_biotype: protein_coding
description:
  Similar to SYGA_COXBU (P94616) Glycyl-tRNA synthetase alpha chain from Coxiella burnetii (319 aa). FASTA opt: 1545 Z-score: 1938.6 E(): 4.3e-100 Smith-Waterman score: 1545; 73.720 identity in 293 aa overlap.


ensembl_gene_id: FTT_0420
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.


ensembl_gene_id: FTT_0422
symbol: murF
gene_biotype: protein_coding
description:
  Outer membrane lipoprotein, pseudogene; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: FTT_0428
symbol: thrC1
gene_biotype: protein_coding
description:
  Similar to Q8PLH7 Homoserine kinase from Xanthomonas axonopodis (306 aa). FASTA: opt: 458 Z-score: 540.1 E(): 3.1e-22 Smith-Waterman score: 563; 36.246 identity in 309 aa overlap.


ensembl_gene_id: FTT_0430
symbol: speH
gene_biotype: protein_coding
description:
  Beta-galactosidase I, fragment; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.


ensembl_gene_id: FTT_0431
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: FTT_0432
symbol: speA
gene_biotype: protein_coding
description:
  Similar to Q8A2B1 Putative arginine decarboxylase from Bacteroides thetaiotamicron (630 aa). FASTA: opt: 571 Z-score: 678.2 E(): 6.9e-30 Smith-Waterman score: 689; 28.755 identity in 546 aa overlap.


ensembl_gene_id: FTT_0434
symbol: FTT_0434
gene_biotype: protein_coding
description:
  Similar to Q8KCB6 Hypothetical protein CT1508 from Chlorobium tepidum (347 aa). FASTA: opt: 742 Z-score: 939.4 E(): 2e-44 Smith-Waterman score: 837; 38.484 identity in 343 aa overlap PAD_porph is a possible virulence factor for P. gingivalis: PMID: 10377098 ORF ftt0434; Belongs to the agmatine deiminase family.


ensembl_gene_id: FTT_0435
symbol: aguB
gene_biotype: protein_coding
description:
  Similar to Q87NU4 Putative carbon-nitrogen hydrolase from Vibrio parahaemolyticus (288 aa). FASTA: opt: 1139 Z-score: 1419.0 E(): 3.8e-71 Smith-Waterman score: 1139; 57.971 identity in 276 aa overlap. Possible candidate for citrulline ureidase ORF ftt0435.


ensembl_gene_id: FTT_0436c
symbol: lpxH
gene_biotype: protein_coding
description:
  UDP-2,3-diacylglucosamine hydrolase; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: FTT_0437c
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: FTT_0438
symbol: mpl
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate. Belongs to the MurCDEF family. Mpl subfamily.


ensembl_gene_id: FTT_0439
symbol: yjfH
gene_biotype: protein_coding
description:
  Similar to YJFH_ECOLI (P39290) hypothetical tRNA/rRNA methyltransferase yjfH from E. coli (243 aa). FASTA: opt: 556, Z-score: 695.5, E(): 7.5e-31 Smith-Waterman score: 556; 43.128 identity in 211 aa overlap. This CDS is disrupted by the insertion of an ISFtu1 element close to the C-terminal. It is not clear whether this insertion affects the function of the protein; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: FTT_0442c
symbol: FTT_0442c
gene_biotype: protein_coding
description:
  Similar to Q8M6V4 NADH dehydrogenase subunit 5 (Fragment) from Prioneris autothisbe (291 aa). FASTA: opt: 168 Z-score: 205.5 E(): 0.0013 Smith-Waterman score: 172; 28.241identity in 216 aa overlap. Contains a frameshift after aa 123 and a possible deletion on C-terminal ORF ftt0441c.


ensembl_gene_id: FTT_0443
symbol: FTT_0443
gene_biotype: protein_coding
description:
  Similar to Q83C03 Conserved domain protein from Coxiella burnetii (377 aa). FASTA: opt: 359 Z-score: 409.9 E(): 6.1e-15 Smith-Waterman score: 380; 27.350 identity in 351 aa overlap ORF ftt0443.


ensembl_gene_id: FTT_0444
symbol: tet
gene_biotype: protein_coding
description:
  Multidrug transporter (tetracycline resistance protein); Similar to Q83CB9 Multidrug transporter, putative from Coxiella burnetii (412 aa). FASTA: opt: 558 Z-score: 638.9 E(): 1.1e-27 Smith-Waterman score: 558; 25.854identity in 410 aa overlap. Similar to tetA and tetC which are situated on a plasmid in E. coli.


ensembl_gene_id: FTT_0446
symbol: uup
gene_biotype: protein_coding
description:
  ABC transporter, ATP-binding, pseudogene; Similar to Q9HZI7 Probable ATP-binding component of ABC transporter from Pseudomonas aeruginosa (640 aa). FASTA: opt: 1264 Z-score: 1173.6 E(): 1.8e-57 Smith-Waterman score: 1355; 38.629 identity in 642 aa overlap. Contains an in-frame stop codon after aa 389 and a frameshift after aa 584. Frameshift occurs at a heptanucleotide sequence and so could be part of a programmed translational frameshift.


ensembl_gene_id: FTT_0447c
symbol: FTT_0447c
gene_biotype: protein_coding
description:
  Similar to Q83DW3 Hypothetical protein from Coxiella burnetii (497 aa). FASTA: opt: 334 Z-score: 356.6 E(): 5.7e-12 Smith-Waterman score: 336; 24.129 identity in 402 aa overlap ORF ftt0447c.


ensembl_gene_id: FTT_0448c
symbol: glnS
gene_biotype: protein_coding
description:
  Similar to Q87YQ1 Glutaminyl-tRNA synthetase from Pseudomonas syringae (pv. tomato) (569 aa). FASTA: opt: 2160 Z-score: 2562.5 E(): 7.7e-135 Smith-Waterman score: 2160; 57.064 identity in 545 aa overlap.


ensembl_gene_id: FTT_0449
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.


ensembl_gene_id: FTT_0450
symbol: mraY
gene_biotype: protein_coding
description:
  Phospho-N-acetylmuramoyl-pentapeptide transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: FTT_0451
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: FTT_0452
symbol: ftsW
gene_biotype: protein_coding
description:
  Cell division protein FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily.


ensembl_gene_id: FTT_0453c
symbol: FTT_0453c
gene_biotype: protein_coding
description:
  Similar to Q83DW2 Hypothetical protein from Coxiella burnetii (273 aa). FASTA: opt: 554 Z-score: 648.8 E(): 3e-28 Smith-Waterman score: 554; 37.407identity in 270 aa overlap ORF ftt0453c.


ensembl_gene_id: FTT_0454
symbol: yfdH
gene_biotype: protein_coding
description:
  Similar to Q83DW4 Glycosyl transferase, group 2 family protein from Coxiella burnetii (324 aa). FASTA: opt: 896 Z-score: 1055.7 E(): 6.5e-51 Smith-Waterman score: 896; 43.189identity in 301 aa overlap.


ensembl_gene_id: FTT_0455c
symbol: FTT_0455c
gene_biotype: protein_coding
description:
  Dolichyl-phosphate-mannose-protein mannosyltransferase family protein; Similar to Q8XQM9 Probable transmembrane protein from Ralstonia solanacearum (551 aa). FASTA: opt: 683 Z-score: 749.4 E(): 7.6e-34 Smith-Waterman score: 683; 29.174 identity in 545 aa overlap ORF ftt0455c.


ensembl_gene_id: FTT_0456c
symbol: FTT_0456c
gene_biotype: protein_coding
description:
  UPF0269 family protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes.


ensembl_gene_id: FTT_0458
symbol: sspA
gene_biotype: protein_coding
description:
  Stringent starvation protein A, regulator of transcription; Similar to SSPA_HAESO (P31784) Stringent starvation protein A homolog from Haemophilus somnus (212 aa). FASTA: opt: 377 Z-score: 473.8 E(): 1.7e-18 Smith-Waterman score: 377; 35.106 identity in 188 aa overlap.


ensembl_gene_id: FTT_0459
symbol: sohB
gene_biotype: protein_coding
description:
  Similar to many Q8ED37 SohB protein,peptidase U7 family from Shewanella oneidensis (342 aa). FASTA: opt: 961 Z-score: 1093.4 E(): 5.2e-53 Smith-Waterman score: 961; 49.355 identity in 310 aa overlap.


ensembl_gene_id: FTT_0460
symbol: holB
gene_biotype: protein_coding
description:
  DNA polymerase III, delta prime subunit; Similar to Q8D3A6 HolB protein from Wigglesworthia glossinidia brevipalpis (329 aa). FASTA: opt: 315 Z-score: 378.8 E(): 3.3e-13 Smith-Waterman score: 315; 27.304 identity in 293 aa overlap.


ensembl_gene_id: FTT_0461
symbol: yhbY
gene_biotype: protein_coding
description:
  Similar to Q87LZ3 Putative RNA-binding protein containing KH domain from Vibrio parahaemolyticus (98 aa). FASTA: opt: 289 Z-score: 405.9 E(): 1e-14 Smith-Waterman score: 289; 52.222 identity in 90 aa overlap.


ensembl_gene_id: FTT_0462
symbol: hemB
gene_biotype: protein_coding
description:
  Similar to Q9ZNC9 Delta-aminolevulinic acid dehydratase from Clostridium perfringens (321 aa). FASTA: opt: 1246 Z-score: 1549.1 E(): 2.2e-78 Smith-Waterman score: 1246; 57.812identity in 320 aa overlap; Belongs to the ALAD family.


ensembl_gene_id: FTT_0463
symbol: yibK
gene_biotype: protein_coding
description:
  tRNA/rRNA methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.


ensembl_gene_id: FTT_0464
symbol: ansB
gene_biotype: protein_coding
description:
  Similar to ASG2_HAEIN (P43843) Probable L-asparaginase periplasmic [Precursor] from Haemophilus influenzae (349 aa). FASTA: opt: 897 Z-score: 1034.7 E(): 9.6e-50 Smith-Waterman score: 897; 43.966 identity in 348 aa overlap. No signal peptide predicted.


ensembl_gene_id: FTT_0466c
symbol: argS
gene_biotype: protein_coding
description:
  Similar to SYR_SALTY (P74871) Arginyl-tRNA synthetase from Salmonella typhimurium (577 aa). FASTA: opt: 1159 Z-score: 1408.5 E(): 1.5e-70 Smith-Waterman score: 1159; 34.841 identity in 597 aa overlap.


ensembl_gene_id: FTT_0467
symbol: ostA1
gene_biotype: protein_coding
description:
  Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.


ensembl_gene_id: FTT_0468
symbol: surA
gene_biotype: protein_coding
description:
  Similar to Q8ZIK4 Survival protein SurA (Peptidyl-prolyl cis-trans isomerase) from Yersinia pestis (434 aa). FASTA: opt: 532 Z-score: 586.9 E(): 8.4e-25 Smith-Waterman score: 532; 25.176 identity in 425 aa overlap.


ensembl_gene_id: FTT_0469
symbol: ksgA
gene_biotype: protein_coding
description:
  Dimethyladenosine transferase, kasugamycin resistance; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: FTT_0470
symbol: apaH
gene_biotype: protein_coding
description:
  Bis(5'-nucleosyl)-tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.


ensembl_gene_id: FTT_0471
symbol: aroD
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: FTT_0472
symbol: accB
gene_biotype: protein_coding
description:
  Acetyl-CoA carboxylase, biotin carboxyl carrier protein subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: FTT_0473
symbol: accC
gene_biotype: protein_coding
description:
  Acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: FTT_0475
symbol: msc
gene_biotype: protein_coding
description:
  Mechanosensitive ion channel protein; Similar to Q87G16 (Q87G16) Putative membrane protein from Vibrio parahaemolyticus (365 aa). FASTA: opt: 362 Z-score: 432.0 E(): 3.6e-16 Smith-Waterman score: 412; 29.167 identity in 384 aa overlap.


ensembl_gene_id: FTT_0476c
symbol: poxA
gene_biotype: protein_coding
description:
  Similar to Q83AR3 (Q83AR3) Lysyl-tRNA synthetase-related protein from Coxiella burnetii (321 aa). FASTA: opt: 727 Z-score: 890.9 E(): 9.9e-42 Smith-Waterman score: 727; 42.088 identity in 297 aa overlap.


ensembl_gene_id: FTT_0477c
symbol: birA
gene_biotype: protein_coding
description:
  Bifunctional protein, biotin-[acetylCoA carboxylase] holoenzyme synthetase; Similar to Q83CV0 BirA bifunctional protein from Coxiella burnetii (323 aa). FASTA: opt: 375 Z-score: 457.7 E(): 1.3e-17 Smith-Waterman score: 375; 31.004 identity in 229 aa overlap.


ensembl_gene_id: FTT_0478c
symbol: recJ
gene_biotype: protein_coding
description:
  Similar to RECJ_HAEIN (P45112) single-stranded-DNA-specific exonuclease from Haemophilus influenzae (575 aa). FASTA: opt: 869 Z-score: 996.6 E(): 1.3e-47 Smith-Waterman score: 902; 32.028identity in 562 aa overlap.


ensembl_gene_id: FTT_0479c
symbol: perM
gene_biotype: protein_coding
description:
  PerM family protein; Similar to Q9I4W6 Hypothetical protein PA1007 from Pseudomonas aeruginosa (357 aa). FASTA: opt: 1016 Z-score: 1092.5 E(): 5.8e-53 Smith-Waterman score: 1016; 40.698 identity in 344 aa overlap.


ensembl_gene_id: FTT_0480c
symbol: xasA
gene_biotype: protein_coding
description:
  Glutamate:gamma-aminobutyric acid antiporter family protein (APC family protein); Similar to Q8YBJ1 Glutamate:gamma-aminobutyrate antiporter from Brucella melitensis (510 aa). FASTA: opt: 983 Z-score: 1079.5 E(): 3.1e-52 Smith-Waterman score: 983; 34.698 identity in 464 aa overlap.


ensembl_gene_id: FTT_0481
symbol: potF
gene_biotype: protein_coding
description:
  Putrescine-binding periplasmic protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.


ensembl_gene_id: FTT_0483c
symbol: rsgA
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: FTT_0486
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: FTT_0487
symbol: FTT_0487
gene_biotype: protein_coding
description:
  Similar to Q83AI9 Membrane protein,putative from Coxiella burnetii (401 aa). FASTA: 306 opt: 370 Z-score: 417.4 E(): 2.3e-15 Smith-Waterman score: 370; 30.342 identity in 234 aa overlap ORF ftt0487.


ensembl_gene_id: FTT_0488c
symbol: FTT_0488c
gene_biotype: protein_coding
description:
  Similar to Q83BM0 Major facilitator family transporter from Coxiella burnetii (428 aa). FASTA: opt: 319 Z-score: E(): 3.7e-11 Smith-Waterman score: 319; 21.951 identity in 369 aa overlap ORF ftt0488c.


ensembl_gene_id: FTT_0489c
symbol: trxB
gene_biotype: protein_coding
description:
  Similar to Q8ZGC9 Thioredoxin reductase from Yersinia pestis (320 aa). FASTA: opt: 1525 Z-score: 1798.2 E(): 2.9e-92 Smith-Waterman score: 1525; 70.927 identity in 313 aa overlap.


ensembl_gene_id: FTT_0490c
symbol: FTT_0490c
gene_biotype: protein_coding
description:
  Similar Q888K0 Phospholipase D family protein from Pseudomonas syringae (pv. tomato) (422 aa). FASTA: opt: 440 Z-score: 514.4 E(): 9.2e-21 Smith-Waterman score: 440; 25.840 identity in 387 aa overlap ORF ftt0490c.


ensembl_gene_id: FTT_0491c
symbol: gph
gene_biotype: protein_coding
description:
  Similar to Q82SZ4 Phosphoglycolate phosphatase from Nitrosomonas europaea (240 aa). FASTA: opt: 432 Z-score: 532.2 E(): 9.4e-22 Smith-Waterman score: 432; 33.486 identity in 218 aa overlap.


ensembl_gene_id: FTT_0492c
symbol: lysR
gene_biotype: protein_coding
description:
  Similar to Q87J66 Transcriptional regulator, LysR family from Vibrio parahaemolyticus (311 aa). FASTA: opt: 675 Z-score: 768.6 E(): 6.4e-35 Smith-Waterman score: 675; 33.115 identity in 305 aa overlap; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: FTT_0494c
symbol: cutC
gene_biotype: protein_coding
description:
  Major facilitator superfamily (MFS) transport protein, pseudogene; Participates in the control of copper homeostasis. Belongs to the CutC family.


ensembl_gene_id: FTT_0495
symbol: FTT_0495
gene_biotype: protein_coding
description:
  Similar to Q9K0Q8 Hypothetical protein NMB0526 from Neisseria meningitidis (serogroup B) (172 aa). FASTA: opt: 455 Z-score: 573.9 E(): 4.5e-24 Smith-Waterman score: 455; 42.353 identity in 170 aa overlap ORF ftt0495.


ensembl_gene_id: FTT_0496
symbol: FTT_0496
gene_biotype: protein_coding
description:
  Similar to Q935B8 Hypothetical protein HCM2.0044c from Salmonella typhi (251 aa). FASTA: opt: 242 Z-score: 297.7 E(): 1.1e-08 Smith-Waterman score: 296; 28.000 identity in 250 aa overlap ORF ftt0496.


ensembl_gene_id: FTT_0499
symbol: FTT_0499
gene_biotype: protein_coding
description:
  ATP-grasp domain protein; Similar to AAO80296 (Q838K6)Di-/tripeptide transporter from Enterococcus faecalis (493 aa). FASTA: opt: 907 Z-score: 1018.4 E(): 7.1e-49 Smith-Waterman score: 907; 34.623 identity in 491 aa overlap. Contains 2 in-frame stop codons after aa 379 and 420 ORF ftt0498c.


ensembl_gene_id: FTT_0501c
symbol: FTT_0501c
gene_biotype: protein_coding
description:
  Similar to Q9I0I7 Hypothetical protein PA2651 from Pseudomonas aeruginosa (352 aa). FASTA: opt: 382 Z-score: 397.1 E(): 3.2e-14 Smith-Waterman score: 382; 26.686 identity in 341 aa overlap ORF ftt0501c.


ensembl_gene_id: FTT_0503c
symbol: sucD
gene_biotype: protein_coding
description:
  Succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: FTT_0504c
symbol: sucC
gene_biotype: protein_coding
description:
  Succinyl-CoA synthetase beta chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: FTT_0507
symbol: FTT_0507
gene_biotype: protein_coding
description:
  Conserved hypothetical lipoprotein; Similar to Q9X610 BcfH from Salmonella typhimurium (269 aa). FASTA: opt: 305 Z-score: 371.4 E(): 8.5e-13 Smith-Waterman score: 305; 31.122 identity in 196 aa overlap ORF ftt0507.


ensembl_gene_id: FTT_0508c
symbol: dusA
gene_biotype: protein_coding
description:
  RNA dihydrouridine synthase A; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily.


ensembl_gene_id: FTT_0509c
symbol: FTT_0509c
gene_biotype: protein_coding
description:
  Similar to Q8DBN3 Conserved hypothetical protein from Vibrio vulnificus (184 aa). FASTA: opt: 275 Z-score: 356.8 E(): 5.5e-12 Smith-Waterman score: 275; 30.208 identity in 192 aa overlap ORF ftt0509c.


ensembl_gene_id: FTT_0510
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: FTT_0511
symbol: pdxS
gene_biotype: protein_coding
description:
  Pyridoxine/pyridoxal 5-phosphate biosynthesis protein; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.


ensembl_gene_id: FTT_0512
symbol: pdxT
gene_biotype: protein_coding
description:
  SNO glutamine amidotransferase family protein; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.


ensembl_gene_id: FTT_0515
symbol: lldD2
gene_biotype: protein_coding
description:
  L-lactate dehydrogenase, pseudogene; Similar to Q9KKW6 L-lactate dehydrogenase from Vibrio cholerae (378 aa). FASTA: opt: 927 Z-score: 1134.7 E(): 2.6e-55 Smith-Waterman score: 999; 43.005 identity in 386 aa overlap. Contains a frameshift after aa 179.


ensembl_gene_id: FTT_0518
symbol: prmA
gene_biotype: protein_coding
description:
  Iron-containing alcohol dehydrogenase,pseudogene; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: FTT_0519
symbol: FTT_0519
gene_biotype: protein_coding
description:
  Nif3 family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: FTT_0522
symbol: FTT_0522
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, fragment; Similar to Q8KDY9 Hypothetical protein CT0905 from (173 aa). opt: 268 Z-score: 346.0 E(): 2e-11 Smith-Waterman score: 268; 54.795 identity in 73 aa overlap. Contains no start codon due to a deletion at N-terminal ORF ftt0521.


ensembl_gene_id: FTT_0523
symbol: FTT_0523
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to Q89Z57 Type I restriction enzyme EcoAI specificity protein from Bacteroides thetaiotamicron (474 aa). FASTA: opt: 208 Z-score: 239.0 E(): 2e-05 Smith-Waterman score: 246; 24.363 identity in 353 aa overlap ORF ftt0523.


ensembl_gene_id: FTT_0524
symbol: FTT_0524
gene_biotype: protein_coding
description:
  Similar to Q8KBB0 Hypothetical protein CT1879 from Chlorobium tepidum (193 aa). FASTA: opt: 467 Z-score: 629.2 E(): 3.7e-27 Smith-Waterman score: 467; 60.656 identity in 122 aa overlap ORF ftt0524.


ensembl_gene_id: FTT_0525
symbol: FTT_0525
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to RA50_THEVO DNA double-strand break repair rad50 ATPase from Thermoplasma volcanicum (895 aa). FASTA: opt: 188 Z-score: 215.6 E(): 0.0004 Smith-Waterman score: 188; 25.926 identity in 216 aa overlap. Similarity to N terminal domain ORF ftt0525.


ensembl_gene_id: FTT_0530c
symbol: dinP
gene_biotype: protein_coding
description:
  DNA polymerase IV, devoid of proofreading,damage inducible protein P, pseudogene; Similar to Q87Y22 DNA polymerase IV from pseudomonas syringae (353 aa). FASTA: opt: 1041 Z-score: 1243.0 E(): 2.4e-61 Smith-Waterman score: 1041; 49.153 identity in 354 aa overlap. Contains a frameshift after aa 128.


ensembl_gene_id: FTT_0532c
symbol: grxC
gene_biotype: protein_coding
description:
  ABC transporter, ATP-binding protein,pseudogene; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.


ensembl_gene_id: FTT_0533c
symbol: grxA
gene_biotype: protein_coding
description:
  Similar to GLR1_ECOLI (P00277) Glutaredoxin 1 from Escherichia coli (85 aa). FASTA: opt: 191 Z-score: 274.9 E(): 2e-07 Smith-Waterman score: 191; 40.000identity in 80 aa overlap.


ensembl_gene_id: FTT_0534c
symbol: nrdA
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: FTT_0535c
symbol: mdh
gene_biotype: protein_coding
description:
  Lactate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.


ensembl_gene_id: FTT_0537
symbol: coq7
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis protein; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.


ensembl_gene_id: FTT_0538c
symbol: FTT_0538c
gene_biotype: protein_coding
description:
  Conserved hypothetical lipoprotein; Similar to Q87LS3 Hypothetical protein from Vibrio parahaemolyticus (203 aa). FASTA: opt: 267 Z-score: 350.1 E(): 1.3e-11 Smith-Waterman score: 320; 31.795 identity in 195 aa overlap ORF ftt0538c.


ensembl_gene_id: FTT_0540c
symbol: FTT_0540c
gene_biotype: protein_coding
description:
  ThiF family protein, pseudogene; Similar to Q8XPA8 Hypothetical protein CPE0057 from Clostridium perfringens (253 aa). FASTA: opt: 568 Z-score: 689.2 E(): 1.7e-30 Smith-Waterman score: 568; 46.961 identity in 181 aa overlap. Contains an in-frame stop codon after aa 181 ORF ftt0539c.


ensembl_gene_id: FTT_0541c
symbol: yqaB
gene_biotype: protein_coding
description:
  Haloacid dehalogenase; Similar to YQAB_ECOLI (P77475) Hypothetical protein yqaB from Escherichia coli (188 aa). FASTA: opt: 336 Z-score: 422.2 E(): 1.3e-15 Smith-Waterman score: 336; 33.889 identity in 180 aa overlap.


ensembl_gene_id: FTT_0543
symbol: FTT_0543
gene_biotype: protein_coding
description:
  Similar to Q88NW9 Antioxidant,AhpC/Tsa family from Pseudomonas putida (200 aa). FASTA: opt: 979 Z-score: 1280.5 E(): 2e-63 Smith-Waterman score: 979; 72.680 identity in 194 aa overlap. Contains a frameshift after aa 108 unknown EC_number 1.6.4.- ORF ftt0542.


ensembl_gene_id: FTT_0544
symbol: phnA
gene_biotype: protein_coding
description:
  Phosphonoacetate hydrolase; Similar to PHNA_ECOLI PhnA protein from Escherichia coli (111 aa). FASTA: opt: 521 Z-score: 674.6 E(): 1.1e-29 Smith-Waterman score: 521; 66.972identity in 109 aa overlap.


ensembl_gene_id: FTT_0548
symbol: dnaQ
gene_biotype: protein_coding
description:
  DNA polymerase III, epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.


ensembl_gene_id: FTT_0549
symbol: vanY
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase; Similar to Q87AM4 Peptidase (202 aa). FASTA: opt: 481 Z-score: 603.7 E(): 9.8e-26 Smith-Waterman score: 481; 50.000 identity in 142 aa overlap.


ensembl_gene_id: FTT_0550
symbol: FTT_0550
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to Q8EHZ3 TPR domain protein from Shewanella oneidensis (466 aa). FASTA: opt: 304 Z-score: 346.2 E(): 2.2e-11 Smith-Waterman score: 331; 23.333 identity) in 480 aa overlap ORF ftt0550.


ensembl_gene_id: FTT_0552
symbol: FTT_0552
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, pseudogene; Similar to Q92LL0 Hypothetical protein R03032 from Rhizobium meliloti (367 aa). FASTA: opt: 921 Z-score: 1129.8 E(): 4.9e-55 Smith-Waterman score: 921; 44.186 identity in 344 aa overlap. Contains a frameshift after aa 102. Frameshift occurs at a heptanucleotide sequence and so could be part of a programmed translational frameshift. ORF ftt0551; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: FTT_0553
symbol: FTT_0553
gene_biotype: protein_coding
description:
  Similar to Q8EJ53 Conserved hypothetical protein from Shewanella oneidensis (267 aa). FASTA: opt: 859 Z-score: 1057.9 E(): 4.9e-51 Smith-Waterman score: 859; 52.809 identity in 267 aa overlap ORF ftt0553.


ensembl_gene_id: FTT_0554
symbol: FTT_0554
gene_biotype: protein_coding
description:
  Similar to Q99SH0 Hypothetical protein SAV2087 from Stafylococcus aureus (97 aa). FASTA: opt: 243 Z-score: 331.6 E(): 1.4e-10 Smith-Waterman score: 243; 45.455 identity in 77 aa overlap ORF ftt0554.


ensembl_gene_id: FTT_0555
symbol: FTT_0555
gene_biotype: protein_coding
description:
  Similar to Q930P5 Hypothetical protein RA0150 from Rhizobium meliloti (262 aa). FASTA: opt: 924 Z-score: 1048.2 E(): 1.7e-50 Smith-Waterman score: 924; 54.202 identity in 238 aa overlap. Some similarity to glutaredoxin ORF ftt0555.


ensembl_gene_id: FTT_0556c
symbol: oxyR
gene_biotype: protein_coding
description:
  Similar to O06466 Oxidative stress transcriptional regulator from Xanthomonas campestris (313 aa). FASTA: opt: 707 Z-score: 842.2 E(): 5.1e-39 Smith-Waterman score: 707; 36.207 identity in 290 aa overlap; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: FTT_0557
symbol: FTT_0557
gene_biotype: protein_coding
description:
  AhpC/TSA family protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.


ensembl_gene_id: FTT_0558
symbol: FTT_0558
gene_biotype: protein_coding
description:
  Similar to Q8XU62 Hypothetical protein RSc3331 from Ralstonia solanacearum (201 aa). FASTA: opt: 602 Z-score: 724.0 E(): 2e-32 Smith-Waterman score: 602; 48.020 identity in 202 aa overlap ORF ftt0558.


ensembl_gene_id: FTT_0559c
symbol: cmk
gene_biotype: protein_coding
description:
  Cytidylate kinase; Similar to KCY_PASMU (P57875) Cytidylate kinase from Pasteurella multocida (227 aa). FASTA: opt: 748 Z-score: 879.9 E(): 4.1e-41 Smith-Waterman score: 748; 53.425 identity in 219 aa overlap.


ensembl_gene_id: FTT_0560c
symbol: serC
gene_biotype: protein_coding
description:
  Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.


ensembl_gene_id: FTT_0562
symbol: potG
gene_biotype: protein_coding
description:
  Polyamine transporter, ABC transporter,ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: FTT_0563
symbol: potH
gene_biotype: protein_coding
description:
  Polyamine transporter, subunit H, ABC transporter, membrane protein; Similar to Q8FJE8 Putrescine transport system permease protein from Escherichia coli (314 aa). FASTA: opt: 949 Z-score: 1040.4 E(): 4.7e-50 Smith-Waterman score: 949; 43.878 identity in 294 aa overlap.


ensembl_gene_id: FTT_0564
symbol: potI
gene_biotype: protein_coding
description:
  Similar to Q8EHF0 Polyamine ABC transporter, permease protein from Shewanella oneidensis (271 aa). FASTA: opt: 873 Z-score: 1010.7 E(): 2.1e-48 Smith-Waterman score: 873; 46.241 identity in 266 aa overlap.


ensembl_gene_id: FTT_0568
symbol: FTT_0568
gene_biotype: protein_coding
description:
  Conserved hypothetical membrane protein,pseudogene; Similar to Q83DZ8 Proton/peptide symporter family protein from Coxiella burnetii (504 aa). FASTA: opt: 434 Z-score: 486.3 E(): 3.4e-19 Smith-Waterman score: 434; 22.400identity in 500 aa overlap. Contains 2 frameshifts after aa 102 and 334 ORF ftt0567c.


ensembl_gene_id: FTT_0569c
symbol: FTT_0569c
gene_biotype: protein_coding
description:
  Similar to Q8P3T2 Integral membrane protein from Xanthomonas campestris (347 aa). FASTA: opt: 906 Z-score: 1071.1 E(): 9e-52 Smith-Waterman score: 906; 41.739 identity in 345 aa overlap ORF ftt0569c.


ensembl_gene_id: FTT_0571
symbol: FTT_0571
gene_biotype: protein_coding
description:
  Partially similar to Q96F61 Hypothetical protein from Homo sapiens (409 aa). FASTA: opt: 403 Z-score: 516.3 E(): 7.3e-21 Smith-Waterman score: 403; 34.171 identity in 199 aa overlap ORF ftt0571.


ensembl_gene_id: FTT_0572
symbol: FTT_0572
gene_biotype: protein_coding
description:
  Similar to Q8Z269 Putative PTR2 family transport protein from Salmonella typhi (489 aa). FASTA: opt: 729 Z-score: 778.1 E(): 1.9e-35 Smith-Waterman score: 770; 30.524identity in 439 aa overlap ORF ftt0572.


ensembl_gene_id: FTT_0573
symbol: alr
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: FTT_0575
symbol: pheA
gene_biotype: protein_coding
description:
  Similar to Q83AT4 Amino acid permease family protein from Coxiella burnetii (542 aa). FASTA: opt: 1289 Z-score: 1363.6 E(): 4.6e-68 Smith-Waterman score: 1289; 42.534 identity in 442 aa overlap. Contains an in-frame stop codon after aa 284 and a frameshift after aa 445 ORF ftt0574.


ensembl_gene_id: FTT_0576
symbol: FTT_0576
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to Q894N2 Putative zinc metallopeptidase from Clostridium tetani (236 aa). FASTA: opt: 434 Z-score: 526.0 E(): 2.1e-21 Smith-Waterman score: 434; 36.245 identity in 229 aa overlap ORF ftt0576.


ensembl_gene_id: FTT_0577
symbol: sdaA
gene_biotype: protein_coding
description:
  Similar to Q8EEW4 L-serine dehydratase 1 from Shewanella oneidensis (458 aa). FASTA: opt: 1442 Z-score: 1806.4 E(): 1e-92 Smith-Waterman score: 1442; 48.922 identity in 464 aa overlap; Belongs to the iron-sulfur dependent L-serine dehydratase family.


ensembl_gene_id: FTT_0578
symbol: csdB
gene_biotype: protein_coding
description:
  Selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.


ensembl_gene_id: FTT_0579
symbol: FTT_0579
gene_biotype: protein_coding
description:
  Similar to AAP95950 HesB family protein from Haemophilus ducreyi (107 aa). FASTA: opt: 288 Z-score: 392.8 E(): 5.5e-14 Smith-Waterman score: 288; 41.121 identity in 107 aa overlap ORF ftt0579; Belongs to the HesB/IscA family.


ensembl_gene_id: FTT_0580
symbol: FTT_0580
gene_biotype: protein_coding
description:
  Similar to Q83BY3 Hypothetical protein from Coxiella burnetii (180 aa). FASTA: opt: 593 Z-score: 750.6 E(): 6.4e-34 Smith-Waterman score: 593; 48.045 identity in 179 aa overlap ORF ftt0580.


ensembl_gene_id: FTT_0581
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: FTT_0582
symbol: fdx
gene_biotype: protein_coding
description:
  Ferredoxin. Identical to Q47937 Ferredoxin from Francisella novicida. Similar to Q88AH4 Ferredoxin from pseudomonas syringae (83 aa). FASTA: opt: 431 Z-score: 563.2 E(): 1.8e-23 Smith-Waterman score: 431; 65.432 identity in 81 aa overlap.


ensembl_gene_id: FTT_0586
symbol: cas4
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, pseudogene; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.


ensembl_gene_id: FTT_0588
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: FTT_0591
symbol: ansA
gene_biotype: protein_coding
description:
  L-asparaginase; Similar to Q8EEG1 L-asparaginase I from Shewanella oneidensis (337 aa). FASTA: opt: 1041 Z-score: 1293.4 E(): 3.7e-64 Smith-Waterman score: 1041; 49.258identity in 337 aa overlap.


ensembl_gene_id: FTT_0592
symbol: cynT
gene_biotype: protein_coding
description:
  Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.


ensembl_gene_id: FTT_0594c
symbol: FTT_0594c
gene_biotype: protein_coding
description:
  Similar to Q87N89 Hypothetical protein from Vibrio parahaemolyticus (344 aa). FASTA: opt: 706 Z-score: 859.6 E(): 5.5e-40 Smith-Waterman score: 706; 42.160 identity in 287 aa overlap ORF ftt0594c.


ensembl_gene_id: FTT_0595c
symbol: rubA
gene_biotype: protein_coding
description:
  Rubredoxin; Similar to Q88C68 Rubredoxin from Pseudomonas putida (55 aa). FASTA: opt: 334 Z-score: 465.9 E(): 4.6e-18 Smith-Waterman score: 334; 78.431 identity in 51 aa overlap.


ensembl_gene_id: FTT_0597
symbol: FTT_0597
gene_biotype: protein_coding
description:
  Similar to Q9K5Z6 Hypothetical UPF0061 protein BH393 from Bacillus halodurans (492 aa). FASTA: opt: 1251 Z-score: 1519.2 E(): 1e-76 Smith-Waterman score: 1357; 48.233 identity in 481 aa overlap ORF ftt0597.


ensembl_gene_id: FTT_0598c
symbol: FTT_0598c
gene_biotype: protein_coding
description:
  Sodium-dicarboxylate symporter family protein; Similar to Q8XLU3 Probable transmembrane symporter from Clostridium perfringens (435 aa). FASTA: opt: 881 Z-score: 961.9 E(): 1.1e-45 Smith-Waterman score: 881; 33.721identity in 430 aa overlap ORF ftt0598c; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: FTT_0599
symbol: FTT_0599
gene_biotype: protein_coding
description:
  Similar to Q9AAR1 SIS domain protein from Caulobacter crescentus (358 aa). FASTA: opt: 864 Z-score: 1052.1 E(): 1e-50 Smith-Waterman score: 864; 42.353 identity in 340 aa overlap. Putative Glucosamine-fructose-6-phosphate aminotransferase ORF ftt0599.


ensembl_gene_id: FTT_0601
symbol: FTT_0601
gene_biotype: protein_coding
description:
  Major facilitator superfamily (MFS) transport protein, pseudogene; Similar to Q8G3X1 D-xylose-proton symporter from Bifodobacterium longum (517 aa). FASTA: opt: 795 Z-score: 849.1 E(): 2.1e-39 Smith-Waterman score: 795; 33.040 identity in 454 aa overlap. Contains a frameshift after aa 401 ORF ftt0600.


ensembl_gene_id: FTT_0604
symbol: FTT_0604
gene_biotype: protein_coding
description:
  Similar to Q9CNR2 NhaP NA+/H+ antiporter Conserved hypothetical membrane protein from Pasteurella multocida (441 aa). FASTA: opt: 315 Z-score: 391.3 E(): 6.6e-14 Smith-Waterman score: 315; 39.850 identity in 133 aa overlap. Matches to a central part of an Nhap protein ORF ftt0604.


ensembl_gene_id: FTT_0607
symbol: ispG
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, pseudogene; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: FTT_0608
symbol: FTT_0608
gene_biotype: protein_coding
description:
  Similar to Q9KHC2 Hypothetical 27.0 kDa protein from secondary endosymbiont of Glycaspis brimblecombei (244 aa). FASTA: opt: 467 Z-score: 605.3 E(): 8e-26 Smith-Waterman score: 467; 44.751identity in 181 aa overlap ORF ftt0608.


ensembl_gene_id: FTT_0609
symbol: FTT_0609
gene_biotype: protein_coding
description:
  Similar to Q83F75 Peptidase, M24 family protein from Coxiella burnetii (597 aa). FASTA: opt: 1665 Z-score: 1963.9 E(): 1.7e-101 Smith-Waterman score: 1665; 45.286 identity in 594 aa overlap ORF ftt0609.


ensembl_gene_id: FTT_0610
symbol: FTT_0610
gene_biotype: protein_coding
description:
  Similar to Q8DFB3 DNA/RNA endonuclease G from Vibrio vulnificus (247 aa). FASTA: opt: 682 Z-score: 838.7 E(): 8e-39 Smith-Waterman score: 682; 46.311 identity in 244 aa overlap ORF ftt0610.


ensembl_gene_id: FTT_0611c
symbol: FTT_0611c
gene_biotype: protein_coding
description:
  Beta-lactamase; Similar to Q9L6I3 Extended-spectrum beta-lactamase BES-1 from Serratia marcescens (292 aa).FASTA: opt: 621 Z-score: 723.1 E(): 2.2e-32 Smith-Waterman score: 621; 34.397 identity in 282 aa overlap ORF ftt0611c.


ensembl_gene_id: FTT_0614c
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: FTT_0615c
symbol: FTT_0615c
gene_biotype: protein_coding
description:
  Metal ion transporter protein; Similar to Q8EHP0 Magnesium and cobalt efflux protein CorC from Shewanella oneidensis (291 aa). FASTA: opt: 676 Z-score: 772.4 E(): 3.9e-35 Smith-Waterman score: 676; 39.847 identity in 261 aa overlap ORF ftt0615c.


ensembl_gene_id: FTT_0616c
symbol: ybeY
gene_biotype: protein_coding
description:
  Cconserved hypothetical protein, UPF0054 family; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: FTT_0617c
symbol: phoH
gene_biotype: protein_coding
description:
  Simliar to Q87VY0 PhoH-like protein from Pseudomonas syringae (340 aa). FASTA: opt: 1132 Z-score: 1306.4 E(): 7.1e-65 Smith-Waterman score: 1132; 52.923 identity in 325 aa overlap.


ensembl_gene_id: FTT_0618c
symbol: yleA
gene_biotype: protein_coding
description:
  Conserved hypothetical protein yleA; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: FTT_0619
symbol: FTT_0619
gene_biotype: protein_coding
description:
  O-methyltransferase family protein; Similar to O67476 O-methyltransferase from Aquifex aeolicus (212 aa). FASTA: opt: 382 Z-score: 477.6 E(): 1e-18 Smith-Waterman score: 382; 33.495 identity in 206 aa overlap. ORF ftt0619.


ensembl_gene_id: FTT_0620
symbol: FTT_0620
gene_biotype: protein_coding
description:
  HAD superfamily protein; Similar to Q8PER3 Acid phosphatase from Xanthomonas axonopodis (310 aa). FASTA: opt: 238 Z-score: 293.2 E(): 1.9e-08 Smith-Waterman score: 238; 24.583 identity in 240 aa overlap. ORF ftt0620.


ensembl_gene_id: FTT_0621
symbol: tdk
gene_biotype: protein_coding
description:
  Similar to Q87QJ8 Thymidine kinase from Vibrio parahaemolyticus (192 aa). FASTA: opt: 629 Z-score: 820.6 E(): 8.2e-38 Smith-Waterman score: 629; 46.465identity in 198 aa overlap.


ensembl_gene_id: FTT_0623
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor (TF) protein (peptidyl-prolyl cis/trans isomerase); Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: FTT_0624
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease subunit P; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: FTT_0625
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease subunit X; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: FTT_0626
symbol: lon
gene_biotype: protein_coding
description:
  DNA-binding, ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: FTT_0627
symbol: hupB
gene_biotype: protein_coding
description:
  Histone-like protein HU form B; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: FTT_0628
symbol: FTT_0628
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to PPID_BUCAP (Q8K987) Peptidyl-prolyl cis-trans isomerase from Buchnera aphidicola (subsp. Schizaphis graminum) (621 aa). FASTA: opt: 298 Z-score: 309.1E(): 2.5e-09 Smith-Waterman score: 298; 23.362 identity in 351 aa overlap. 200 aa shorter (in C-term) than most of the homologs. ORF ftt0628.


ensembl_gene_id: FTT_0629
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: FTT_0630
symbol: hfq
gene_biotype: protein_coding
description:
  Host factor I for bacteriophage Q beta replication; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: FTT_0631
symbol: hflX
gene_biotype: protein_coding
description:
  Protease, GTP-binding subunit; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: FTT_0632c
symbol: FTT_0632c
gene_biotype: protein_coding
description:
  Monooxygenase family protein; Similar to O53772 Putative oxidoreductase (Monooxygenase) from Mycobacterium tuberculosis (388 aa). FASTA: opt: 832 Z-score: 997.9 E(): 1.1e-47 Smith-Waterman score: 832; 35.550 identity in 391 aa overlap. ORF ftt0632c.


ensembl_gene_id: FTT_0635
symbol: wzb
gene_biotype: protein_coding
description:
  Low molecular weight (LMW) phosphotyrosine protein phosphatase; Similar to O35016 YFKJ protein from Bacillus subtilis (156 aa). FASTA: opt: 391 Z-score: 494.5 E(): 1.2e-19 Smith-Waterman score: 391; 38.608 identity in 158 aa overlap; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: FTT_0636
symbol: engB
gene_biotype: protein_coding
description:
  ATP/GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: FTT_0638
symbol: thrC2
gene_biotype: protein_coding
description:
  Threonine synthase, pseudogene; Similar to THRC_METJA (Q58860) Probable threonine synthase (405 aa). FASTA: opt: opt: 987 Z-score: 1131.2 E(): 3.7e-55 Smith-Waterman score: 987; 44.875 identity in 361 aa overlap. Contains 2 frameshifts after aa 121 and 247.


ensembl_gene_id: FTT_0639
symbol: FTT_0639
gene_biotype: protein_coding
description:
  Hypothetical protein; Putative fragment. Weak similarity to leuA LE12_METJA (Q58595) 2-isopropylmalate synthase 2 from Methanococcus jannaschii (518 aa). FASTA: opt: 86 Z-score: 142.0 E(): 5.1 Smith-Waterman score: 86; 50.000 identity in 32 aa overlap (1-32:479-510). Next upstream ORF also have similarity to leuA. ORF ftt0639.


ensembl_gene_id: FTT_0640
symbol: ilvD
gene_biotype: protein_coding
description:
  Similar to CAD77389 Dihydroxy-acid dehydratase from Rhodopirellula baltica (587 aa). FASTA: opt: 2464 Z-score: 2877.4 E(): 2.2e-152 Smith-Waterman score: 2464; 65.814 identity in 547 aa overlap. 30 aa shorter in the N-terminal than the homologs; Belongs to the IlvD/Edd family.


ensembl_gene_id: FTT_0642
symbol: ilvH
gene_biotype: protein_coding
description:
  Similar to Q8A609 Acetolactate synthase large subunit from Bacteroides thetaiotaomicron (565 aa). FASTA: opt: 1850 Z-score: 2038.0 E(): 1.1e-105 Smith-Waterman score: 1850; 50.089 identity in 559 aa overlap. Contains a frameshift after aa 427.


ensembl_gene_id: FTT_0644c
symbol: mfd
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase, pseudogene; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: FTT_0645c
symbol: FTT_0645c
gene_biotype: protein_coding
description:
  Similar to YCCA_ECOLI (P06967) Hypothetical protein yccA from Escherichia coli (219 aa). FASTA: opt: 588 Z-score: 603.2 E(): 1.1e-25 Smith-Waterman score: 588; 48.416 identity in 221 aa overlap. ORF ftt0645c; Belongs to the BI1 family.


ensembl_gene_id: FTT_0647c
symbol: FTT_0647c
gene_biotype: protein_coding
description:
  Similar to Q82WE7 Hypothetical protein from Nitrosomonas europaea (164 aa). FASTA: opt: 383 Z-score: 490.4 E(): 2e-19 Smith-Waterman score: 383; 41.606 identity in 137 aa overlap. ORF ftt0647c.


ensembl_gene_id: FTT_0648c
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: FTT_0649c
symbol: rnfB
gene_biotype: protein_coding
description:
  Iron-sulfur cluster-binding protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: FTT_0650c
symbol: grxB
gene_biotype: protein_coding
description:
  Similar to Q9CNB4 Grx2 from Pasteurella multocida (215 aa). FASTA: opt: 412 Z-score: 518.8 E(): 5.3e-21 Smith-Waterman score: 412; 32.243 identity in 214 aa overlap.


ensembl_gene_id: FTT_0651
symbol: FTT_0651
gene_biotype: protein_coding
description:
  Proton-dependent oligopeptide transport (POT) family protein; Similar to Q9L9P6 IraB from Legionella pneumophila (501 aa). FASTA: opt: 1486 Z-score: 1640.1 E(): 1.8e-83 Smith-Waterman score: 1486; 46.708 identity in 486 aa overlap. ORF ftt0651.


ensembl_gene_id: FTT_0653
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: FTT_0654
symbol: elbB
gene_biotype: protein_coding
description:
  DJ-1/PfpI family protein; Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate; Belongs to the peptidase C56 family.


ensembl_gene_id: FTT_0655
symbol: FTT_0655
gene_biotype: protein_coding
description:
  Similar to YO32_SHEON (Q8EEF0) Hypothetical UPF0082 protein SO2432 from Shewanella oneidensis (248 aa). FASTA: opt: 1090 Z-score: 1308.8 E(): 5.2e-65 Smith-Waterman score: 1090; 64.516 identity in 248 aa overlap. ORF ftt0655.


ensembl_gene_id: FTT_0656
symbol: ruvC
gene_biotype: protein_coding
description:
  Holliday junction endodeoxyribonuclease; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: FTT_0658
symbol: ruvA
gene_biotype: protein_coding
description:
  Major facilitator superfamily (MFS) transport protein, pseudogene; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: FTT_0659
symbol: FTT_0659
gene_biotype: protein_coding
description:
  DNA recombination protein RmuC family protein; Similar to Q87TH5 Conserved hypothetical protein from Vibrio parahaemolyticus (514 aa). FASTA: opt: 1129 Z-score: 1083.4 E(): 1.9e-52 Smith-Waterman score: 1132; 42.000 identity in 450 aa overlap ORF ftt0659.


ensembl_gene_id: FTT_0661c
symbol: FTT_0661c
gene_biotype: protein_coding
description:
  Similar to Q82LF3 Hypothetical protein from Streptomyces avermitilis (109 aa). FASTA: opt: 260 Z-score: 364.1 E(): 2.2e-12 Smith-Waterman score: 260; 47.778 identity in 90 aa overlap. The homologs are of different sizes. ORF ftt0661c.


ensembl_gene_id: FTT_0662c
symbol: FTT_0662c
gene_biotype: protein_coding
description:
  Similar to Q9KMT3 Hypothetical protein VCA0237 from Vibrio cholerae (189 aa). FASTA: opt: 308 Z-score: 400.0 E(): 2.2e-14 Smith-Waterman score: 308; 42.857 identity in 112 aa overlap. ORF ftt0662c.


ensembl_gene_id: FTT_0664c
symbol: hdc
gene_biotype: protein_coding
description:
  Similar to DCHS_RHILO (Q98A07) Histidine decarboxylase from Rhizobium loti (Mesorhizobium loti) (369 aa). FASTA: opt: 647 Z-score: 787.6 E(): 5.6e-36 Smith-Waterman score: 647; 30.189 identity in 371 aa overlap.


ensembl_gene_id: FTT_0665c
symbol: FTT_0665c
gene_biotype: protein_coding
description:
  Similar to Q88IX8 Class II aldolase/adducin domain protein from Pseudomonas putida (strain KT2440) (251 aa). FASTA: opt: 472 Z-score: 599.3 E(): 1.7e-25 Smith-Waterman score: 472; 38.579identity in 197 aa overlap. ORF ftt0665c.


ensembl_gene_id: FTT_0666c
symbol: FTT_0666c
gene_biotype: protein_coding
description:
  Methylpurine-DNA glycosylase family protein; Similar to Q896H4 DNA-3-methyladenine glycosylase from Clostridium tetani (203 aa). FASTA: opt: 451 Z-score: 589.0 E(): 6.4e-25 Smith-Waterman score: 451; 42.784 identity in 194 aa overlap. ORF ftt0666c; Belongs to the DNA glycosylase MPG family.


ensembl_gene_id: FTT_0668
symbol: pnuC
gene_biotype: protein_coding
description:
  Similar to Q8A546 Putative membrane transporter involved in nicotinamide mononucleotide transport from Bacteroides thetaiotaomicron (188 aa). FASTA: opt: 333 Z-score: 403.8 E(): 1.3e-14 Smith-Waterman score: 333; 29.016identity in 193 aa overlap. ORF ftt0668.


ensembl_gene_id: FTT_0669
symbol: FTT_0669
gene_biotype: protein_coding
description:
  Sodium/hydrogen exchanger family protein; Similar to Q8GRF6 MagA protein from Magnetospirillum magnetotacticum (Aquaspirillum magnetotacticum) (432 aa). FASTA: opt: 769 Z-score: 826.0 E(): 4.1e-38 Smith-Waterman score: 769; 31.635identity in 373 aa overlap. ORF ftt0669.


ensembl_gene_id: FTT_0671
symbol: FTT_0671
gene_biotype: protein_coding
description:
  Similar to Q83DX6 Major facilitator family transporter from Coxiella burnetii (421 aa). FASTA: opt: 689 Z-score: 731.9 E(): 7.1e-33 Smith-Waterman score: 689; 29.197identity in 411 aa overlap. ORF ftt0671.


ensembl_gene_id: FTT_0673c
symbol: FTT_0673c
gene_biotype: protein_coding
description:
  Major facilitator superfamily (MFS) transport protein, pseudogene; Similar to Q83BM0 Major facilitator family transporter from Coxiella burnetii (428 aa). FASTA: opt: 549 Z-score: 638.7 E(): 1.1e-27 Smith-Waterman score: 549; 26.353 identity in 425 aa overlap. Contains a frameshift after aa 109 ORF ftt0672c.


ensembl_gene_id: FTT_0674
symbol: prsA
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: FTT_0675
symbol: rplY
gene_biotype: protein_coding
description:
  50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family.


ensembl_gene_id: FTT_0676
symbol: FTT_0676
gene_biotype: protein_coding
description:
  Similar to Q83E77 Hypothetical protein from Coxiella burnetii (417 aa). FASTA: opt: 1049 Z-score: 1211.5 E(): 1.4e-59 Smith-Waterman score: 1049; 40.049 identity in 407 aa overlap. ORF ftt0676.


ensembl_gene_id: FTT_0677c
symbol: FTT_0677c
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to Q8Z984 Putative methyltransferase from Salmonella typhi (256 aa). FASTA: opt: 707 Z-score: 818.1 E(): 1.1e-37 Smith-Waterman score: 707; 42.570 identity in 249 aa overlap. ORF ftt0677c.


ensembl_gene_id: FTT_0679c
symbol: engD
gene_biotype: protein_coding
description:
  GTP-binding protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: FTT_0680c
symbol: pth
gene_biotype: protein_coding
description:
  Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: FTT_0681c
symbol: blaA
gene_biotype: protein_coding
description:
  Beta-lactamase class A; Similar to BLAC_YEREN (Q01166) Beta-lactamase precursor from Yersinia enterocolitica (294 aa). FASTA: opt: 670 Z-score: 829.7 E(): 2.5e-38 Smith-Waterman score: 670; 36.268 identity in 284 aa overlap.


ensembl_gene_id: FTT_0682c
symbol: FTT_0682c
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.


ensembl_gene_id: FTT_0683c
symbol: pilD
gene_biotype: protein_coding
description:
  Type IV pili leader peptidase and methylase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.


ensembl_gene_id: FTT_0684c
symbol: sthA
gene_biotype: protein_coding
description:
  Similar to STHA_AZOVI (Q9XBQ9) Soluble pyridine nucleotide transhydrogenase from Azotobacter vinelandii (464 aa). FASTA: opt: 1596 Z-score: 1874.3 E(): 1.7e-96 Smith-Waterman score: 1596; 51.502 identity in 466 aa overlap.


ensembl_gene_id: FTT_0685c
symbol: FTT_0685c
gene_biotype: protein_coding
description:
  Potassium channel protein; Similar to KCH_ECOLI (P31069) Putative potassium channel protein (417 aa). FASTA: opt: 381 Z-score: 423.3 E(): 1.1e-15 Smith-Waterman score: 381; 31.203identity in 266 aa overlap. ORF ftt0685c.


ensembl_gene_id: FTT_0686c
symbol: FTT_0686c
gene_biotype: protein_coding
description:
  Proton-dependent oligopeptide transport (POT) family protein; Similar to Q83E30 Proton/peptide symporter family protein from Coxiella burnetii (492 aa). FASTA: opt: 609 Z-score: 644.8 E(): 5e-28 Smith-Waterman score: 609; 26.545 identity in 437 aa overlap. The start is approx 55 aa later than the homologs. ORF ftt0686c.


ensembl_gene_id: FTT_0687c
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent protease, ATP-binding subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: FTT_0688c
symbol: hslV
gene_biotype: protein_coding
description:
  ATP-dependent protease, proteasome-related peptidase subunit; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: FTT_0690c
symbol: lplA
gene_biotype: protein_coding
description:
  Similar to Q9KS71 Lipoate-protein ligase A from Vibrio cholerae (338 aa). FASTA: opt: 699 Z-score: 831.1 E(): 2.1e-38 Smith-Waterman score: 699; 38.545identity in 275 aa overlap.


ensembl_gene_id: FTT_0691
symbol: tyrS
gene_biotype: protein_coding
description:
  Tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.


ensembl_gene_id: FTT_0693c
symbol: mutM
gene_biotype: protein_coding
description:
  Formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: FTT_0694
symbol: FTT_0694
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to AAP18158 2-acyl-glycerophospho-ethanolamine acyltransferase,acyl-acyl-carrier protein synthetase from Shigella flexneri (719 aa). FASTA: opt: 735 Z-score: 862.5 E(): 3.8e-40 Smith-Waterman score: 826; 33.661identity in 508 aa overlap. n. b. No match between aa 1 and 196. Several domains missing compared to AAP18158 ORF ftt0694.


ensembl_gene_id: FTT_0695
symbol: mraW
gene_biotype: protein_coding
description:
  S-adenosyl-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: FTT_0696
symbol: ftsL
gene_biotype: protein_coding
description:
  Hypothetical protein; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: FTT_0697
symbol: ftsI
gene_biotype: protein_coding
description:
  Similar to Q83F33 Penicillin-binding protein 3 from Coxiella burnetii (548 aa). FASTA: opt: 1361 Z-score: 1597.9 E(): 4.1e-81 Smith-Waterman score: 1361; 40.325 identity in 553 aa overlap.


ensembl_gene_id: FTT_0698
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.


ensembl_gene_id: FTT_0699
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: FTT_0701
symbol: kdsA
gene_biotype: protein_coding
description:
  Similar to KDSA_XANCP (Q8P9Z5) 2-dehydro-3-deoxyphosphooctonate aldolase from Xanthomonas campestris (pv. campestris) (276 aa). FASTA: opt: 1300 Z-score: 1617.4 E(): 3.4e-82 Smith-Waterman score: 1300; 70.741 identity in 270 aa overlap; Belongs to the KdsA family.


ensembl_gene_id: FTT_0702
symbol: udk
gene_biotype: protein_coding
description:
  Similar to Q83D69 Uridine kinase from Coxiella burnetii (215 aa). FASTA: opt: 724 Z-score: 879.0 E(): 4.5e-41 Smith-Waterman score: 724; 51.869 identity in 214 aa overlap.


ensembl_gene_id: FTT_0703
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: FTT_0705
symbol: rumA
gene_biotype: protein_coding
description:
  23S rRNA (Uracil-5-)-methyltransferase; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily.


ensembl_gene_id: FTT_0707
symbol: glk2
gene_biotype: protein_coding
description:
  Glucose kinase, pseudogene; Similar to Q8EQ10 Glucose kinase (EC 2.7.1.2) from Oceanobacillus iheyensis (325 aa). FASTA: opt: 569 Z-score: 642.8 E(): 6.5e-28 Smith-Waterman score: 569; 31.111 identity in 315 aa overlap. Contains a frameshift after aa 254.


ensembl_gene_id: FTT_0708
symbol: FTT_0708
gene_biotype: protein_coding
description:
  Similar to Q83BD8 Major facilitator family transporter from Coxiella burnetii (411 aa). FASTA: opt: 868 Z-score: 941.6 E(): 1.5e-44 Smith-Waterman score: 868; 37.912identity in 364 aa overlap. ORF ftt0708.


ensembl_gene_id: FTT_0709
symbol: eno
gene_biotype: protein_coding
description:
  Enolase (2-phosphoglycerate dehydratase); Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.


ensembl_gene_id: FTT_0710
symbol: ftsB
gene_biotype: protein_coding
description:
  Cell division protein; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: FTT_0711
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: FTT_0712c
symbol: sdaC1
gene_biotype: protein_coding
description:
  Serine transporter; Similar to SDAC_HAEIN (P44615) Serine transporter from Haemophilus influenzae (412 aa). FASTA: opt: 785 Z-score: 854.1 E(): 1.1e-39 Smith-Waterman score: 785; 33.099 identity in 426 aa overlap.


ensembl_gene_id: FTT_0713c
symbol: tdh
gene_biotype: protein_coding
description:
  L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family.


ensembl_gene_id: FTT_0714c
symbol: kbl
gene_biotype: protein_coding
description:
  2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.


ensembl_gene_id: FTT_0715
symbol: FTT_0715
gene_biotype: protein_coding
description:
  Chitinase family 18 protein; Similar to Q9ZIX2 Chitinase c from Pseudoalteromonas sp. S9 (869 aa). FASTA: opt: 331 Z-score: 370.4 E(): 9.6e-13 Smith-Waterman score: 583; 24.111 identity in 900 aa overlap. The homologs are of varying sizes. ORF ftt0715.


ensembl_gene_id: FTT_0716
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: FTT_0718
symbol: purU
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate deformylase, pseudogene; Similar to Q9KQK6 Formyltetrahydrofolate deformylase (277 aa). FASTA: opt: 1088 Z-score: 1353.6 E(): 1.7e-67 Smith-Waterman score: 1088; 59.206 identity in 277 aa overlap. Contains a frameshift after aa 81. Frameshift occurs at a heptanucleotide sequence and so could be part of a programmed translational frameshift.


ensembl_gene_id: FTT_0719
symbol: FTT_0719
gene_biotype: protein_coding
description:
  Major facilitator superfamily (MFS) transport protein; Aa 139-320 identical to AAP97846 Hypothetical protein (Fragment) from Francisella tularensis ssp. tularensis strain SchuS4 (184 aa). Similar to Q881T0 Proline/betaine transporter from Pseudomonas syringae (pv. tomato) (438 aa). FASTA: opt: 561 Z-score: 633.8 E(): 2.1e-27 Smith-Waterman score: 561; 25.616 identity in 406 aa overlap. ORF ftt0719.


ensembl_gene_id: FTT_0720c
symbol: dgt
gene_biotype: protein_coding
description:
  Similar to DGT1_VIBPA (Q87R73) Deoxyguanosinetriphosphate triphosphohydrolase-like protein from Vibrio parahaemolyticus (440 aa). FASTA: opt: 587 Z-score: 683.8 E(): 3.4e-30 Smith-Waterman score: 661; 33.781identity in 447 aa overlap; Belongs to the dGTPase family. Type 2 subfamily.


ensembl_gene_id: FTT_0723c
symbol: FTT_0723c
gene_biotype: protein_coding
description:
  Similar to Q88H18 Oxidoreductase, short chain dehydrogenase/reductase family Pseudomonas putida (strain KT2440) (248 aa). FASTA: opt: 792 Z-score: 881.9 E(): 3.1e-41 Smith-Waterman score: 792; 47.984 identity in 248 aa overlap. ORF ftt0723c.


ensembl_gene_id: FTT_0725c
symbol: glpT
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase (Penicillin binding protein) family protein, pseudogene; Similar to Q8EEI8 Penicillin-binding protein 4 from Shewanella oneidensis (507 aa) aa). FASTA: opt: 645 Z-score: 721.3 E(): 2.5e-32 Smith-Waterman score: 645; 31.478identity in 467 aa overlap. Contains a frameshift after aa 136. Frameshift occurs at a heptanucleotide sequence and so could be part of a programmed translational frameshift.


ensembl_gene_id: FTT_0726c
symbol: FTT_0726c
gene_biotype: protein_coding
description:
  Glycerophosphoryl diester phosphodiesterase family protein; Similar to Q89FW5 Blr6584 protein from Bradyrhizobium japonicum (342 aa). FASTA: opt: 636 Z-score: 743.1 E(): 1.7e-33 Smith-Waterman score: 743; 36.336identity in 333 aa overlap. ORF ftt0726c.


ensembl_gene_id: FTT_0727
symbol: FTT_0727
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to Q83FA0 Lipoprotein, putative from Coxiella burnetii (326 aa). FASTA: opt: 255 Z-score: 290.7 E(): 2.7e-08 Smith-Waterman score: 255; 26.606 identity in 218 aa overlap. n. b. The ORF is 100 aa shorter than all homologs (C-term). ORF ftt0727.


ensembl_gene_id: FTT_0728
symbol: ybhF
gene_biotype: protein_coding
description:
  Similar to Q89II5 ABC transporter ATP-binding protein (310 aa). FASTA: opt: 1060 Z-score: 1223.8 E(): 2.8e-60 Smith-Waterman score: 1060; 54.605 identity in 304 aa overlap.


ensembl_gene_id: FTT_0729
symbol: ybhR
gene_biotype: protein_coding
description:
  Similar to Q8Y316 Probable transmembrane protein from Ralstonia solanacearum (Pseudomonas solanacearum) (381 aa). FASTA: opt: 1138 Z-score: 1260.3 E(): 2.6e-62 Smith-Waterman score: 1138; 45.722 identity in 374 aa overlap.


ensembl_gene_id: FTT_0733
symbol: FTT_0733
gene_biotype: protein_coding
description:
  Similar to Q9A7J3 Glutathione peroxidase from Caulobacter crescentus (160 aa). FASTA: opt: 605 Z-score: 801.1 E(): 9.9e-37 Smith-Waterman score: 605; 55.696 identity in 158 aa overlap. ORF ftt0733.


ensembl_gene_id: FTT_0736
symbol: FTT_0736
gene_biotype: protein_coding
description:
  Similar to Q81CC3 Mandelate racemase/muconate lactonizing enzyme family protein Bacillus cereus (strain ATCC 14579 / DSM 31) (350 aa). FASTA: opt: 653 Z-score: 766.5 E(): 8.4e-35 Smith-Waterman score: 653; 34.877identity in 324 aa overlap. Contains 2 in-frame stop codons after aa 84 and 199 ORF ftt0735.


ensembl_gene_id: FTT_0738
symbol: yjeF
gene_biotype: protein_coding
description:
  Carbohydrate kinase family protein (YjeF-related protein); Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydr [...]


ensembl_gene_id: FTT_0739c
symbol: hslR
gene_biotype: protein_coding
description:
  Similar to Q88AZ6 Heat shock protein 15 from Pseudomonas syringae (pv. tomato) (135 aa). FASTA: Z-score: 549.3 E(): 1.1e-22 Smith-Waterman score: 447; 58.824 identity in 119 aa overlap; Belongs to the HSP15 family.


ensembl_gene_id: FTT_0743
symbol: FTT_0743
gene_biotype: protein_coding
description:
  Similar to Q87Q96 Conserved hypothetical protein from Vibrio parahaemolyticus (274 aa). FASTA: opt: 950 Z-score: 1132.9 E(): 3.3e-55 Smith-Waterman score: 950; 49.259 identity in 270 aa overlap. ORF ftt0743.


ensembl_gene_id: FTT_0746c
symbol: FTT_0746c
gene_biotype: protein_coding
description:
  Similar to Q88NQ5 Membrane protein, putative from Pseudomonas putida (strain KT2440) (662 aa). FASTA: opt: 267 Z-score: 319.4 E(): 6.8e-10 Smith-Waterman score: 269; 27.179 identity in 195 aa overlap. ORF ftt0746c.


ensembl_gene_id: FTT_0747c
symbol: FTT_0747c
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to Q88NQ3 Membrane fusion protein,putative (289 aa). FASTA: opt: 721 Z-score: 853.4 E(): 1.2e-39 Smith-Waterman score: 721; 41.434identity in 251 aa overlap. Similar to ydhJ and yhcQ in E. coli. ORF ftt0747c; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: FTT_0748
symbol: FTT_0748
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to Q93PU6 Putative regulatory protein TtgV from Pseudomonas putida (259 aa). FASTA: opt: 485 Z-score: 588.0 E(): 7.4e-25 Smith-Waterman score: 485; 33.473 identity in 239 aa overlap. ORF ftt0748.


ensembl_gene_id: FTT_0749c
symbol: FTT_0749c
gene_biotype: protein_coding
description:
  Aa 8-183 identical to AAP97845 Hypothetical protein (Fragment) from Francisella tularensis ssp. tularensis strain SchuS4 (176 aa). Similar to Q8CL71 Hypothetical from Yersinia pestis (311 aa). FASTA: opt: 842 Z-score: 992.9 E(): 2e-47 Smith-Waterman score: 842; 44.710 identity in 293 aa overlap ORF ftt0749c.


ensembl_gene_id: FTT_0750
symbol: epmB
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to Q83AM1 Radical SAM domain protein from Coxiella burnetii (342 aa). FASTA: opt: 1094 Z-score: 1304.2 E(): 9.4e-65 Smith-Waterman score: 1094; 48.930 identity in 327 aa overlap. ORF ftt0750.


ensembl_gene_id: FTT_0751c
symbol: cspA
gene_biotype: protein_coding
description:
  Similar to Q89UH2 Cold shock protein from Bradyrhizobium japonicum (70 aa). FASTA: opt: 297 Z-score: 443.7 E(): 8e-17 Smith-Waterman score: 297; 66.176 identity in 68 aa overlap.


ensembl_gene_id: FTT_0753
symbol: rpsU2
gene_biotype: protein_coding
description:
  Similar to RS21_VIBCH (Q9KUJ9) 30S ribosomal protein S21 from Vibrio cholerae (71 aa). FASTA: opt: 219 Z-score: 313.8 E(): 1.4e-09 Smith-Waterman score: 219; 56.250 identity in 64 aa overlap; Belongs to the bacterial ribosomal protein bS21 family.


ensembl_gene_id: FTT_0756
symbol: FTT_0756
gene_biotype: protein_coding
description:
  Similar to Q83BX5 Cation-efflux family protein from Coxiella burnetii (378 aa). FASTA: opt: 773 Z-score: 908.9 E(): 9.8e-43 Smith-Waterman score: 774; 34.605 identity in 367 aa overlap. ORF ftt0756; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: FTT_0757
symbol: galU
gene_biotype: protein_coding
description:
  Similar to Q9K0G7 UTP--glucose-1-phosphate uridylyltransferase from Neisseria meningitidis (serogroup B) (289 aa). FASTA: opt: 1017 Z-score: 1291.1 E(): 5e-64 Smith-Waterman score: 1017; 57.439 identity in 289 aa overlap.


ensembl_gene_id: FTT_0759
symbol: acs
gene_biotype: protein_coding
description:
  Similar to Q92KX2 Probable acetyl-coenzyme A synthetase 2 from Rhizobium meliloti (Sinorhizobium meliloti) (649 aa). FASTA: opt: 1346 Z-score: 1602.8 E(): 2.2e-81 Smith-Waterman score: 1424; 39.908 identity in 649 aa overlap. Contains an internal deletion after aa 134 that causes a corresponding frameshift.


ensembl_gene_id: FTT_0762c
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein recF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP.


ensembl_gene_id: FTT_0763c
symbol: yjjV
gene_biotype: protein_coding
description:
  TatD related DNAse family protein; Similar to YJJV_ECOLI (P39408) Putative deoxyribonuclease yjjV (259 aa). FASTA: opt: 503 Z-score: 595.3 E(): 2.9e-25 Smith-Waterman score: 503; 31.048 identity in 248 aa overlap.


ensembl_gene_id: FTT_0764
symbol: glyS
gene_biotype: protein_coding
description:
  Similar to SYGB_COXBU (P45651) Glycyl-tRNA synthetase beta chain from Coxiella burnetii (689 aa). FASTA: opt: 1810 Z-score: 2108.8 E(): 1.4e-109 Smith-Waterman score: 1810; 42.939 identity in 694 aa overlap.


ensembl_gene_id: FTT_0766
symbol: deoD
gene_biotype: protein_coding
description:
  Similar to Q9PQL0 Purine-nucleoside phosphorylase from Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (239 aa). FASTA: opt: 697 Z-score: 837.2 E(): 9.7e-39 Smith-Waterman score: 697; 47.534 identity in 223 aa overlap.


ensembl_gene_id: FTT_0769
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase, subunit A, ATPase secretion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family.


ensembl_gene_id: FTT_0772
symbol: rplU
gene_biotype: protein_coding
description:
  Glycerate kinase, pseudogene; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: FTT_0773
symbol: rpmA
gene_biotype: protein_coding
description:
  Similar to RL27_YERPE (Q8ZBA7) 50S ribosomal protein L27 from Yersinia pestis (85 aa). FASTA: opt: 431 Z-score: 607.3 E(): 6.2e-26 Smith-Waterman score: 431; 77.108 identity in 83 aa overlap; Belongs to the bacterial ribosomal protein bL27 family.


ensembl_gene_id: FTT_0774
symbol: FTT_0774
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to Q8DJY4 Tll1086 protein from Synechococcus elongatus (Thermosynechococcus elongatus) (126 aa). FASTA: opt: 516 Z-score: 715.9 E(): 5.5e-32 Smith-Waterman score: 516; 64.348 identity in 115 aa overlap. ORF ftt0774.


ensembl_gene_id: FTT_0776c
symbol: rnd
gene_biotype: protein_coding
description:
  Major facilitator superfamily (MFS) transport protein, pseudogene; Similar to Q81IY9 Bicyclomycin resistance protein from Bacillus cereus (strain ATCC 14579 / DSM 31) (416 aa). FASTA: opt: 598 Z-score: 663.2 E(): 4.7e-29 Smith-Waterman score: 598; 28.960 identity in 404 aa overlap. Contains a frameshift after aa 103 Putative drug transport protein.


ensembl_gene_id: FTT_0777
symbol: uvrC
gene_biotype: protein_coding
description:
  DNA excision repair enzyme, subunit C (UvrABC system protein A); The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: FTT_0781c
symbol: FTT_0781c
gene_biotype: protein_coding
description:
  Similar to Q82UL5 Hypothetical protein from Nitrosomonas europaea (239 aa). FASTA: opt: 736 Z-score: 920.8 E(): 2.1e-43 Smith-Waterman score: 736; 54.680 identity in 203 aa overlap. The family of possible lysine decarboxylase proteins shares a highly conserved motif PGGXGTXXE that is probably functionally important. This protein has that motif. ORF ftt0781c; Belongs to the LOG family.


ensembl_gene_id: FTT_0782
symbol: fabI
gene_biotype: protein_coding
description:
  Enoyl-[acyl-carrier-protein] reductase (NADH); Similar to Q87YS1 Enoyl-(acyl-carrier-protein) reductase from Pseudomonas syringae (pv. tomato) (264 aa). FASTA: opt: 1071 Z-score: 1313.1 E(): 3e-65 Smith-Waterman score: 1071; 62.595 identity in 262 aa overlap.


ensembl_gene_id: FTT_0783
symbol: ars
gene_biotype: protein_coding
description:
  Arylsulfatase; Similar to Q9CPJ8 Arylsulfatase from Pasteurella multocida (327 aa). FASTA: opt: 544 Z-score: 669.4 E(): 2.2e-29 Smith-Waterman score: 544; 31.420 identity in 331 aa overlap.


ensembl_gene_id: FTT_0785
symbol: FTT_0785
gene_biotype: protein_coding
description:
  Similar to Q88K93 Conserved hypothetical protein (277 aa). FASTA: opt: 718 Z-score: 855.8 E(): 8.9e-40 Smith-Waterman score: 718; 42.308identity in 260 aa overlap. ORF ftt0785.


ensembl_gene_id: FTT_0787
symbol: FTT_0787
gene_biotype: protein_coding
description:
  DoxD-like family protein; Similar to Q8EDN3 Conserved hypothetical protein from Shewanella oneidensis (197 aa). FASTA: opt: 435 Z-score: 540.9 E(): 3.1e-22 Smith-Waterman score: 435; 42.935 identity in 184 aa overlap. ORF ftt0787.


ensembl_gene_id: FTT_0788c
symbol: kdsD
gene_biotype: protein_coding
description:
  Arabinose phosphate isomerase; Involved in the biosynthesis of 3-deoxy-D-manno-octulosonate (KDO), a unique 8-carbon sugar component of lipopolysaccharides (LPSs). Catalyzes the reversible aldol-ketol isomerization between D-ribulose 5-phosphate (Ru5P) and D-arabinose 5-phosphate (A5P).


ensembl_gene_id: FTT_0789
symbol: rpe
gene_biotype: protein_coding
description:
  Similar to Q8EK14 Ribulose-phosphate 3-epimerase (225 aa). FASTA: opt: 953 Z-score: 1164.4 E(): 5.8e-57 Smith-Waterman score: 953; 65.766identity in 222 aa overlap.


ensembl_gene_id: FTT_0790
symbol: FTT_0790
gene_biotype: protein_coding
description:
  Bacterial sugar transferase family protein; Similar to Q9FDJ5 Putative glycosyltransferase from Lactobacillus rhamnosus (466 aa). FASTA: opt: 733 Z-score: 876.0 E(): 6.7e-41 Smith-Waterman score: 733; 33.333 identity in 399 aa overlap. ORF ftt0790.


ensembl_gene_id: FTT_0792
symbol: FTT_0792
gene_biotype: protein_coding
description:
  Glycosyl transferases group 1 family protein; Similar to Q9HTC0 Glycosyltransferase WbpZ from Pseudomonas aeruginosa (381 aa). FASTA: opt: 621 Z-score: 721.7 E(): 2.6e-32 Smith-Waterman score: 1019; 38.725 identity in 408 aa overlap. ORF ftt0792.


ensembl_gene_id: FTT_0793
symbol: FTT_0793
gene_biotype: protein_coding
description:
  Similar to Q8DMA7 ATP-binding protein of ABC transporter from Synechococcus elongatus (Thermosynechococcus elongatus) (610 aa). FASTA: opt: 1084 Z-score: 1105.1 E(): 1.2e-53 Smith-Waterman score: 1084; 35.159 identity in 566 aa overlap. ORF ftt0793.


ensembl_gene_id: FTT_0794
symbol: FTT_0794
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to AAP76675 Phosphoserine phosphatase (EC 3.1.3.3) from Helicobacter hepaticus (199 aa). FASTA: opt: 751 Z-score: 908.2 E(): 1.1e-42 Smith-Waterman score: 751; 55.385 identity in 195 aa overlap (18-212:4-198) AND to AAP76674 Hypothetical protein from Helicobacter hepaticus (213 aa). FASTA: opt: 823 Z-score: 994.3 E(): 1.7e-47 Smith-Waterman score: 823; 57.212 identity in 208 aa overlap (221-428:6-213). Seems to be two genes in some organisms. ORF ftt0794.


ensembl_gene_id: FTT_0795
symbol: FTT_0795
gene_biotype: protein_coding
description:
  Similar to AAP76671 Hypothetical protein cfa from Helicobacter hepaticus (210 aa). FASTA: opt: 627 Z-score: 745.4 E(): 1.3e-33 Smith-Waterman score: 627; 44.660 identity in 206 aa overlap. ORF ftt0795.


ensembl_gene_id: FTT_0797
symbol: FTT_0797
gene_biotype: protein_coding
description:
  Glycosyl transferase family protein; Similar to O85000 Galactosyl transferase from Streptococcus pneumoniae (323 aa). FASTA: opt: 577 Z-score: 682.7 E(): 3.9e-30 Smith-Waterman score: 577; 40.171 identity in 234 aa overlap. Same homolog as for next downstream ORF. ORF ftt0797.


ensembl_gene_id: FTT_0798
symbol: FTT_0798
gene_biotype: protein_coding
description:
  Glycosyl transferase family protein; Similar to O85000 Galactosyl transferase from Streptococcus pneumoniae (323 aa). FASTA: opt: 499 Z-score: 609.1 E(): 4.9e-26 Smith-Waterman score: 499; 34.454 identity in 238 aa overlap. Same homolog as for next upstream ORF. ORF ftt0798.


ensembl_gene_id: FTT_0799
symbol: FTT_0799
gene_biotype: protein_coding
description:
  Glycosyl transferases group 1 family protein; Similar to Q00481 Second mannosyl transferase from Salmonella enterica (336 aa). FASTA: opt: 651 Z-score: 775.2 E(): 2.7e-35 Smith-Waterman score: 651; 35.455 identity in 330 aa overlap. ORF ftt0799.


ensembl_gene_id: FTT_0800
symbol: FTT_0800
gene_biotype: protein_coding
description:
  Similar to Q8FV27 Hydrolase, haloacid dehalogenase-like family from Brucella suis (234 aa). FASTA: opt: 422 Z-score: 503.3 E(): 3.8e-20 Smith-Waterman score: 422; 33.486identity in 218 aa overlap. ORF ftt0800.


ensembl_gene_id: FTT_0801c
symbol: FTT_0801c
gene_biotype: protein_coding
description:
  Carbohydrate/purine kinase pfkB family protein; Similar to Q9YG89 310AA long hypothetical sugar kinase from Aeropyrum pernix (310 aa). FASTA: opt: 245 Z-score: 292.6 E(): 2.1e-08 Smith-Waterman score: 311; 25.795 identity in 283 aa overlap. ORF ftt0801c.


ensembl_gene_id: FTT_0802
symbol: cphB
gene_biotype: protein_coding
description:
  Cyanophycinase; Similar to CPHB_SYNY8 (P56946) Cyanophycinase from Synechocystis sp. (strain PCC 6308) (272 aa). FASTA: opt: 701 Z-score: 857.3 E(): 7.4e-40 Smith-Waterman score: 701; 41.667 identity in 264 aa overlap; Belongs to the peptidase S51 family.


ensembl_gene_id: FTT_0803
symbol: ans
gene_biotype: protein_coding
description:
  Asparaginase; Similar to Q9ABX3 Asparaginase family protein from Caulobacter crescentus (292 aa). FASTA: 146 opt: 465 Z-score: 567.7 E(): 1e-23 Smith-Waterman score: 465; 35.606 identity in 264 aa overlap.


ensembl_gene_id: FTT_0804
symbol: FTT_0804
gene_biotype: protein_coding
description:
  Major facilitator superfamily (MFS) transport protein; Similar to O54543 (O54543) CITA from Legionella pneumophila (418 aa). FASTA: opt: 905 Z-score: 915.1 E(): 4.5e-43 Smith-Waterman score: 905; 33.254 identity in 418 aa overlap. ORF ftt0804.


ensembl_gene_id: FTT_0805
symbol: capB
gene_biotype: protein_coding
description:
  Similar to CAD71904 Capsule biosynthesis protein CapB from Rhodopirellula baltica (441 aa). FASTA: opt: 1155 Z-score: 1414.5 E(): 6.8e-71 Smith-Waterman score: 1156; 46.763 identity (50.914 ungapped) in 417 aa overlap.


ensembl_gene_id: FTT_0806
symbol: capC
gene_biotype: protein_coding
description:
  Similar to Q8REZ4 CapC protein from Fusobacterium nucleatum (152 aa). FASTA: opt: 360 Z-score: 420.9 E(): 1.5e-15 Smith-Waterman score: 360; 35.616 identity in 146 aa overlap.


ensembl_gene_id: FTT_0807
symbol: pgsW
gene_biotype: protein_coding
description:
  Similar to CAD71902 Hypothetical protein from Rhodopirellula baltica (404 aa). FASTA: opt: 477 Z-score: 563.9 E(): 1.6e-23 Smith-Waterman score: 553; 31.633 identity in 392 aa overlap. ORF ftt0807.


ensembl_gene_id: FTT_0808
symbol: spoT
gene_biotype: protein_coding
description:
  Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase/(p)ppGpp synthase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: FTT_0809c
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein recR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: FTT_0810c
symbol: ybaB
gene_biotype: protein_coding
description:
  Conserved hypothetical UPF0133 protein ybaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: FTT_0811c
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: FTT_0812
symbol: gcvH2
gene_biotype: protein_coding
description:
  Glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: FTT_0816c
symbol: FTT_0816c
gene_biotype: protein_coding
description:
  Similar to Q8EHY2 Chitin-binding protein,putative from Shewanella oneidensis (491 aa). FASTA: opt: 532 Z-score: 628.3 E(): 4.2e-27 Smith-Waterman score: 532; 43.500 identity in 200 aa overlap. ORF ftt0816c.


ensembl_gene_id: FTT_0817
symbol: thrS
gene_biotype: protein_coding
description:
  Threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). Also edits incorrectly charged L-seryl-tRNA(Thr).


ensembl_gene_id: FTT_0818
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: FTT_0819
symbol: rpmI
gene_biotype: protein_coding
description:
  Similar to RL35_ECOLI 50S ribosomal protein L35 from Escherichia coli (64 aa). FASTA: opt: 247 Z-score: 385.9 E(): 1.3e-13 Smith-Waterman score: 247; 62.500 identity in 64 aa overlap; Belongs to the bacterial ribosomal protein bL35 family.


ensembl_gene_id: FTT_0820
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: FTT_0821
symbol: FTT_0821
gene_biotype: protein_coding
description:
  Similar to Q9KRB9 Hypothetical protein VC1723 from Vibrio cholerae (229 aa). FASTA: opt: 344 Z-score: 394.7 E(): 4.3e-14 Smith-Waterman score: 344; 29.075 identity in 227 aa overlap. ORF ftt0821.


ensembl_gene_id: FTT_0823
symbol: FTT_0823
gene_biotype: protein_coding
description:
  MutT protein; Similar to Q9K8B7 Mutator MutT protein from Bacillus halodurans (207 aa). FASTA: opt: 413 Z-score: 505.4 E(): 2.9e-20 Smith-Waterman score: 413; 36.649identity in 191 aa overlap. ORF ftt0823.


ensembl_gene_id: FTT_0824
symbol: arsC1
gene_biotype: protein_coding
description:
  Similar to Q8CPW9 Arsenate reductase from Staphylococcus epidermidis (117 aa). FASTA: opt: 276 Z-score: 376.2 E(): 4.6e-13 Smith-Waterman score: 276; 32.759 identity in 116 aa overlap; Belongs to the ArsC family.


ensembl_gene_id: FTT_0827c
symbol: FTT_0827c
gene_biotype: protein_coding
description:
  Similar to YIEG_ECOLI Hypothetical protein yieG from Escherichia coli (445 aa). FASTA: opt: 945 Z-score: 1037.7 E(): 6.6e-50 Smith-Waterman score: 945; 34.633 identity in 436 aa overlap. ORF ftt0827c.


ensembl_gene_id: FTT_0829c
symbol: FTT_0829c
gene_biotype: protein_coding
description:
  L-aspartate-beta-decarboxylase, pseudogene; Similar to Q845W8 L-aspartate-beta-decarboxylase from Pseudomonas dacunhae (533 aa). FASTA: opt: 1854 Z-score: 2243.7 E(): 4.4e-117 Smith-Waterman score: 1854; 54.476 identity in 525 aa overlap. Contains a frameshift after aa 198 ORF ftt0828c.


ensembl_gene_id: FTT_0831c
symbol: FTT_0831c
gene_biotype: protein_coding
description:
  Similar to Q8XJQ3 Smf protein DNA processing chain A from Clostridium perfringens (360 aa). FASTA: 754 Z-score: 848.5 E(): 2.1e-39 Smith-Waterman score: 754; 37.151identity in 358 aa overlap. Contains a frameshift after aa 153. ORF ftt0830c.


ensembl_gene_id: FTT_0832
symbol: fkpB
gene_biotype: protein_coding
description:
  Similar to FKBX_ECOLI (P22563) FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase from Escherichia coli (148 aa). FASTA: opt: 357 Z-score: 475.0 E(): 1.4e-18 Smith-Waterman score: 357; 38.129 identity in 139 aa overlap.


ensembl_gene_id: FTT_0833
symbol: ispH
gene_biotype: protein_coding
description:
  IspH protein; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: FTT_0834
symbol: aroQ
gene_biotype: protein_coding
description:
  Similar to CHMU_BACSU Chorismate mutase from Bacillus subtilis (127 aa). FASTA: opt: 360 Z-score: 492.8 E(): 1.5e-19 Smith-Waterman score: 360; 48.305identity in 118 aa overlap.


ensembl_gene_id: FTT_0835
symbol: FTT_0835
gene_biotype: protein_coding
description:
  Similar to Q8EBE8 CDP-diacylglycerol--serine O-phosphatidyltransferase from Shewanella oneidensis (269 aa). FASTA: opt: 456 Z-score: 550.1 E(): 9.5e-23 Smith-Waterman score: 564; 37.209 identity in 258 aa overlap. ORF ftt0835; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: FTT_0837
symbol: tolQ
gene_biotype: protein_coding
description:
  Similar to TOLQ_ECOLI TolQ protein from Escherichia coli (230 aa). FASTA: opt: 568 Z-score: 690.3 E(): 1.5e-30 Smith-Waterman score: 568; 38.991 identity in 218 aa overlap.


ensembl_gene_id: FTT_0838
symbol: tolR
gene_biotype: protein_coding
description:
  TolR protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: FTT_0839
symbol: tolA
gene_biotype: protein_coding
description:
  tolA protein; FTT0839 Contains similarity to Pfam domain PF06519 (TolA protein), Score=-66.2, E-value=1.4e-05.


ensembl_gene_id: FTT_0840
symbol: tolB
gene_biotype: protein_coding
description:
  TolB protein precursor; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: FTT_0842
symbol: pal
gene_biotype: protein_coding
description:
  Similar to PAL_ECOLI Peptidoglycan-associated lipoprotein from Escherichia coli (173 aa). FASTA: opt: 306 Z-score: 383.2 E(): 1.9e-13 Smith-Waterman score: 306; 33.333 identity in 162 aa overlap. ORF ftt0842.


ensembl_gene_id: FTT_0845
symbol: FTT_0845
gene_biotype: protein_coding
description:
  Similar to Q9F7P6 Predicted CsgA,Rossman fold oxidoreductase from Gamma-proteobacterium EBAC31A08 (262 aa). FASTA: opt: 764 Z-score: 936.3 E(): 2.9e-44 Smith-Waterman score: 764; 53.390identity in 236 aa overlap. Contains an in-frame stop codon after aa 59 ORF ftt0844.


ensembl_gene_id: FTT_0846
symbol: FTT_0846
gene_biotype: protein_coding
description:
  Similar to Q9KS67 Deoxyribodipyrimidine photolyase, putative from Vibrio cholerae (504 aa). FASTA: opt: 1071 Z-score: 1263.0 E(): 1.8e-62 Smith-Waterman score: 1097; 37.817 identity in 513 aa overlap. ORF ftt0846; Belongs to the DNA photolyase family.


ensembl_gene_id: FTT_0847
symbol: FTT_0847
gene_biotype: protein_coding
description:
  Similar to Q8U6P2 Hypothetical protein Atu4765 (507 aa). FASTA: opt: 1800 Z-score: 2192.9 415.3 E(): 3e-114 Smith-Waterman score: 1800; 53.608identity in 485 aa overlap. ORF ftt0847.


ensembl_gene_id: FTT_0848
symbol: FTT_0848
gene_biotype: protein_coding
description:
  Similar to Q8P3G1 Hypothetical protein XCC4110 from Xanthomonas campestris (51 aa). FASTA: opt: 243 Z-score: 366.5 E(): 1.6e-12 Smith-Waterman score: 243; 63.636 identity in 44 aa overlap ORF ftt0848.


ensembl_gene_id: FTT_0849
symbol: FTT_0849
gene_biotype: protein_coding
description:
  Similar to Q81YH5 Bile acid transporter family protein from Bacillus anthracis (322 aa). FASTA: initn: 551 init1: 399 opt: 605 Z-score: 641.1 E(): 8.1e-28 Smith-Waterman score: 605; 32.432identity in 296 aa overlap. ORF ftt0849.


ensembl_gene_id: FTT_0850
symbol: FTT_0850
gene_biotype: protein_coding
description:
  Similar to Q930D7 Hypothetical protein RA0261 Rhizobium meliloti (222 aa). FASTA: opt: 521 Z-score: 614.9 E(): 2.3e-26 Smith-Waterman score: 521; 42.424 identity in 198 aa overlap. ORF ftt0850.


ensembl_gene_id: FTT_0851
symbol: FTT_0851
gene_biotype: protein_coding
description:
  Similar to Q83C04 Membrane protein, putative from Coxiella burnetii (263 aa). FASTA: opt: 338 Z-score: 387.6 E(): 1.1e-13 Smith-Waterman score: 341; 28.625 identity in 269 aa overlap. ORF ftt0851.


ensembl_gene_id: FTT_0853
symbol: FTT_0853
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, pseudogene; Weakly similar to Q8D5E8 Transglutaminase-like enzyme from Vibrio vulnificus (300 aa). FASTA: opt: 336 Z-score: 432.9 E(): 3.2e-16 Smith-Waterman score: 401; 29.779 identity in 272 aa overlap. Contains a frameshift after codon 183 ORF ftt0852.


ensembl_gene_id: FTT_0854c
symbol: FTT_0854c
gene_biotype: protein_coding
description:
  Similar to Q8EM34 Hypothetical conserved protein from Oceanobacillus iheyensis (123 aa). FASTA: opt: 271 Z-score: 341.6 E(): 3.9e-11 Smith-Waterman score: 271; 37.190 identity in 121 aa overlap. ORF ftt0854c.


ensembl_gene_id: FTT_0855c
symbol: FTT_0855c
gene_biotype: protein_coding
description:
  Weakly similar to Q9KR35 Hypothetical protein VC1812 from Vibrio cholerae (139 aa). FASTA: opt: 184 Z-score: 256.0 E(): 2.3e-06 Smith-Waterman score: 184; 29.245 identity in 106 aa overlap. ORF ftt0855c.


ensembl_gene_id: FTT_0856c
symbol: ubiA
gene_biotype: protein_coding
description:
  4-hydroxybenzoate octaprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.


ensembl_gene_id: FTT_0857c
symbol: FTT_0857c
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family.


ensembl_gene_id: FTT_0858
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: FTT_0861c
symbol: FTT_0861c
gene_biotype: protein_coding
description:
  Type IV pili fiber building block protein; Similar to FMA2_BACNO (P17824) Fimbrial protein precursor (Pilin) from Bacteroides nodosus (Dichelobacter nodosus) (160 aa). FASTA: opt: 169 Z-score: 222.1 E(): 0.00018 Smith-Waterman score: 169; 34.646 identity in 127 aa overlap The pili fiber building block protein has a highly distinct primary structure; a short positively charged leader sequence, and a highly conserved and highly hydrophobic amino-terminal domain which forms the core of the pilus fiber; A variety of studies suggest that the invariant glycine (G) at -1 is required for prepi [...]


ensembl_gene_id: FTT_0862c
symbol: htpX
gene_biotype: protein_coding
description:
  Similar to Q83DZ2 Heat shock protein HtpX from Coxiella burnetii (348 aa). FASTA: opt: 956 Z-score: 1111.3 E(): 5.2e-54 Smith-Waterman score: 1062; 47.091 identity in 361 aa overlap.


ensembl_gene_id: FTT_0863c
symbol: FTT_0863c
gene_biotype: protein_coding
description:
  Similar to Q83DZ3 LemA protein from Coxiella burnetii (192 aa) initn: 723 init1: 655 opt: 732 Z-score: 803.2 bits: 155.4 E(): 7.6e-37 Smith-Waterman score: 732; 60.417 identity in 192 aa overlap. ORF ftt0863c.


ensembl_gene_id: FTT_0864c
symbol: FTT_0864c
gene_biotype: protein_coding
description:
  Similar to Q87XZ5 Transcriptional regulator, LysR family, from Pseudomonas syringae (308 aa). FASTA: opt: 591 Z-score: 726.5 E(): 1.4e-32 Smith-Waterman score: 591; 34.948 identity in 289 aa overlap. ORF ftt0864c; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: FTT_0868c
symbol: FTT_0868c
gene_biotype: protein_coding
description:
  Arsenical restistance operon repressor; Similar to Q9RA93 ArsR from Sinorhizobium sp. As4 (115 aa). FASTA: opt: 185 Z-score: 259.0 bits: 53.3 E(): 1.6e-06 Smith-Waterman score: 185; 27.184 identity in 103 aa overlap. ORF ftt0868c.


ensembl_gene_id: FTT_0871
symbol: gpsA
gene_biotype: protein_coding
description:
  Similar to P37606 Glycerol-3-phosphate dehydrogenase from Escherichia coli (339 aa). FASTA: opt: 892 Z-score: 1087.2 bits: 209.5 E(): 1.2e-52 Smith-Waterman score: 892; 43.713identity in 334 aa overlap; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: FTT_0873c
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein radA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: FTT_0875c
symbol: FTT_0875c
gene_biotype: protein_coding
description:
  Similar to YOHD_ECOLI (P33366) Hypothetical protein yohD from Escherichia coli (192 aa). FASTA: opt: 311 Z-score: 379.7 bits: 77.1 E(): 2.9e-13 Smith-Waterman score: 311; 24.870 identity (25.806 ungapped) in 193 aa overlap. ORF ftt0875c.


ensembl_gene_id: FTT_0876c
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: FTT_0878c
symbol: msrB
gene_biotype: protein_coding
description:
  Similar to MSRB_CLOAB Q97IU0 Peptide methionine sulfoxide reductase msrB from Clostridium acetobutylicum (146 aa). FASTA: opt: 581 Z-score: 736.5 E(): 3.6e-33 Smith-Waterman score: 581; 61.765 identity in 136 aa overlap Domain frequently associated with peptide methionine sulfoxide reductase.


ensembl_gene_id: FTT_0879
symbol: sodC
gene_biotype: protein_coding
description:
  Superoxide dismuate (Cu-Zn) precusor; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.


ensembl_gene_id: FTT_0881c
symbol: FTT_0881c
gene_biotype: protein_coding
description:
  Similar to Q87PL0 Conserved hypothetical protein from Vibrio parahaemolyticus (275 aa). FASTA: opt: 818 Z-score: 1003.8 E(): 4.6e-48 Smith-Waterman score: 818; 46.457 identity in 254 aa overlap. Contains a frameshift after 21 aa ORF ftt0880.


ensembl_gene_id: FTT_0884c
symbol: aspC1
gene_biotype: protein_coding
description:
  Similar to CAD84818 Alcohol dehydrogenase class III from Ralstonia solanacearum (368 aa). FASTA: opt: 1760 Z-score: 1914.4 E(): 8.8e-99 Smith-Waterman score: 1760; 69.189identity in 370 aa overlap. Contains frameshifts after aa 86 and 105 ORF ftt0883.


ensembl_gene_id: FTT_0885
symbol: FTT_0885
gene_biotype: protein_coding
description:
  Cation transporter; Similar to Q8D6R6 Predicted Co/Zn/Cd cation transporter from Vibrio vulnificus (297 aa). FASTA: opt: 344 Z-score: 414.1 E(): 3.3e-15 Smith-Waterman score: 344; 25.296 identity in 253 aa overlap. ORF ftt0885.


ensembl_gene_id: FTT_0888c
symbol: FTT_0888c
gene_biotype: protein_coding
description:
  Type IV pili fiber building block protein; Similar to Q59607 Pilin precursor from Neisseria gonorrhoeae (169 aa). FASTA: opt: 244 Z-score: 305.7 E(): 3.5e-09 Smith-Waterman score: 244; 30.435 identity in 138 aa overlap. The pili fiber building block protein has a highly distinct primary structure; a short positively charged leader sequence, and a highly conserved and highly hydrophobic amino-terminal domain which forms the core of the pilus fiber; A variety of studies suggest that the invariant glycine (G) at -1 is required for prepilin cleavage and assembly and that the glutamate (E)  [...]


ensembl_gene_id: FTT_0889c
symbol: FTT_0889c
gene_biotype: protein_coding
description:
  Type IV pili fiber building block protein; Similar to Q820M2 Fimbrial protein pilin:bacterial general secretion pathway protein H from Nitrosomonas europaea (136 aa). FASTA: opt: 216 Z-score: 280.1 E(): 1e-07 Smith-Waterman score: 218; 32.639 identity in 144 aa overlap. The pili fiber building block protein has a highly distinct primary structure; a short positively charged leader sequence, and a highly conserved and highly hydrophobic amino-terminal domain which forms the core of the pilus fiber; A variety of studies suggest that the invariant glycine (G) at -1 is required for prepili [...]


ensembl_gene_id: FTT_0890c
symbol: FTT_0890c
gene_biotype: protein_coding
description:
  Type IV pili fiber building block protein; Similar to Q8Y1X9 Type 4 fimbrial pilin signal peptide protein from Ralstonia solanacearum (168 aa). FASTA: opt: 278 Z-score: 327.6 E(): 2.1e-10 Smith-Waterman score: 292; 38.095identity in 147 aa overlap. The pili fiber building block protein has a highly distinct primary structure; a short positively charged leader sequence, and a highly conserved and highly hydrophobic amino-terminal domain which forms the core of the pilus fiber; A variety of studies suggest that the invariant glycine (G) at -1 is required for prepilin cleavage and assembl [...]


ensembl_gene_id: FTT_0891
symbol: FTT_0891
gene_biotype: protein_coding
description:
  Similar to Q98NS1 Hypothetical protein mlr0012 from Rhizobium loti (244 aa). FASTA: opt: 327 Z-score: 404.4 bits: 82.2 E(): 1.2e-14 Smith-Waterman score: 327; 32.308 identity in 195 aa overlap. ORF ftt0891.


ensembl_gene_id: FTT_0892
symbol: folD
gene_biotype: protein_coding
description:
  Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: FTT_0893
symbol: purM
gene_biotype: protein_coding
description:
  Similar to Q8RC57 Phosphoribosylaminoimidazol (AIR) synthetase from Thermoanaerobacter tengcongensis (336 aa). FASTA: pt: 1022 Z-score: 1121.9 E(): 1.2e-54 Smith-Waterman score: 1022; 47.463 identity in 335 aa overlap.


ensembl_gene_id: FTT_0894
symbol: purCD
gene_biotype: protein_coding
description:
  Fusion protein PurC/PurD; Amino acids 1-327 (PurC) similar to AAR06292 SAICAR synthetase from Nicotiana tabacum (399 aa). BLAST: Expect = e-105 Identities = 187/322 (58), Positives = 236/322 (73), Gaps = 6/322 (1). Amino acids 328-770 (PurD) similar to ZP_00077753 Phosphoribosylamine-glycine ligase from Methanosarcina barkeri (433). BLAST: Expect = e-108 Identities = 204/436 (46), Positives = 285/436 (65), Gaps = 3/436 (0); Belongs to the GARS family.


ensembl_gene_id: FTT_0895
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: FTT_0896
symbol: purE
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase,catalyic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: FTT_0897
symbol: purK
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase, ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: FTT_0898c
symbol: FTT_0898c
gene_biotype: protein_coding
description:
  Similar to Q88N88 Conserved hypothetical protein TIGR002 from Pseudomonas putida (124 aa). FASTA: opt: 291 Z-score: 402.6 E(): 1.6e-14 Smith-Waterman score: 291; 38.938 identity in 113 aa overlap. ORF ftt0898c; Belongs to the UPF0102 family.


ensembl_gene_id: FTT_0899c
symbol: prlC
gene_biotype: protein_coding
description:
  Similar to P27298 Oligopeptidase A from Escherichia coli (680 aa). FASTA: opt: 1936 Z-score: 2040.0 E(): 8.9e-106 Smith-Waterman score: 1936; 43.722 identity in 677 aa overlap.


ensembl_gene_id: FTT_0904
symbol: lpnB
gene_biotype: protein_coding
description:
  Conserved hypothetical lipoprotein; Similar to P18149 17 kDa major membrane protein precursor from Francisella tularensis ssp. holarctica strain LVS (149 aa). FASTA: opt: 274 Z-score: 359.1 E(): 4.1e-12 Smith-Waterman score: 274; 32.468 identity (33.5570ngapped) in 154 aa overlap. Paralog to conserved hypothetical lipoprotein lpnA.


ensembl_gene_id: FTT_0905
symbol: FTT_0905
gene_biotype: protein_coding
description:
  Type IV pili glycosylation protein; Similar to Q8KQ19 PilO from Pseudomonas aeruginosa (461 aa). FASTA: opt: 283 Z-score: 329.7 E(): 1.6e-10 Smith-Waterman score: 283; 25.284 identity in 352 aa overlap. PilO is required for glycosylation of Pseudomonas aeruginosa pilin. ORF ftt0905.


ensembl_gene_id: FTT_0906c
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: FTT_0907
symbol: parA
gene_biotype: protein_coding
description:
  Similar to Q9F260 Partition protein from Actinobacillus actinomycetemcomitans (213 aa). FASTA: opt: 286 Z-score: 339.2 E(): 4.8e-11 mith-Waterman score: 286; 29.245 identity in 212 aa overlap.


ensembl_gene_id: FTT_0908
symbol: parB
gene_biotype: protein_coding
description:
  Similar to Q9CJA4 Chromosome partitioning protein from Lactococcus lactis (261 aa). FASTA: opt: 399 Z-score: 442.0 E(): 9e-17 Smith-Waterman score: 399; 33.333 identity in 264 aa overlap; Belongs to the ParB family.


ensembl_gene_id: FTT_0909
symbol: FTT_0909
gene_biotype: protein_coding
description:
  Similar to Q88LT5 Glutamine amidotransferase, class I from Pseudomonas putida (244 aa). FASTA: opt: 589 Z-score: 771.5 bits: 150.1 E(): 4.4e-35 Smith-Waterman score: 589; 36.325identity in 234 aa overlap. ORF ftt0909.


ensembl_gene_id: FTT_0910
symbol: FTT_0910
gene_biotype: protein_coding
description:
  Hypothetical protein; Weakly similar to Q8GNM7 Lysophospholipase A from Legionella pneumophila (309 aa). FASTA: 86 opt: 302 Z-score: 378.8 bits: 78.1 E(): 3.3e-13 Smith-Waterman score: 360; 29.795 identity in 292 aa overlap. ORF ftt0910.


ensembl_gene_id: FTT_0911
symbol: FTT_0911
gene_biotype: protein_coding
description:
  Similar with Q87NK1 Hypothetical protein from Vibrio parahaemolyticus (195 aa) fasta scores; opt: 523 Z-score: 649.0 E(): 2.7e-28 Smith-Waterman score: 523; 42.857 identity in 189 aa overlap ORF ftt0911.


ensembl_gene_id: FTT_0912c
symbol: rrmJ
gene_biotype: protein_coding
description:
  Ribosomal large subunit methyltransferase J; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.


ensembl_gene_id: FTT_0914c
symbol: lspA
gene_biotype: protein_coding
description:
  Lipoprotein signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: FTT_0915c
symbol: ileS
gene_biotype: protein_coding
description:
  Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: FTT_0916c
symbol: ribF
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibF; Similar to Q9CKF8 RibF from Pasteurella multocida (311 aa). FASTA: opt: 845 Z-score: 994.4 E(): 1.5e-47 Smith-Waterman score: 845; 44.481 identity in 308 aa overlap; Belongs to the ribF family.


ensembl_gene_id: FTT_0917
symbol: maeA
gene_biotype: protein_coding
description:
  Similar to AAO26053 Malic enzyme from Mucor circinelloides (617 aa) fasta scores; opt: 1044 Z-score: 1148.2 E(): 4.2e-56 Smith-Waterman score: 1087; 35.726 identity in 585 aa overlap.


ensembl_gene_id: FTT_0923
symbol: rlmL
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family.


ensembl_gene_id: FTT_0925
symbol: fmt
gene_biotype: protein_coding
description:
  Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: FTT_0926
symbol: gshB
gene_biotype: protein_coding
description:
  Similar to P58578 Glutathione synthetase from Escherichia coli (315 aa). FASTA: opt: 1066 Z-score: 1176.4 E(): 1.1e-57 Smith-Waterman score: 1711; 46.984 identity in 315 aa overlap; Belongs to the prokaryotic GSH synthase family.


ensembl_gene_id: FTT_0927
symbol: hemL
gene_biotype: protein_coding
description:
  Similar to AAO91373 Glutamate-1-semialdehyde-2,1-aminomutase from Coxiella burnetii (435 aa). FASTA: opt: 1711 Z-score: 1960.9 E(): 2.2e-101 Smith-Waterman score: 1711; 60.520identity in 423 aa overlap.


ensembl_gene_id: FTT_0928c
symbol: FTT_0928c
gene_biotype: protein_coding
description:
  SImilar to Q8RD12 Beta-glucosidase-related glycosidases from Thermoanaerobacter tengcongensis (591 aa). FASTA: opt: 1047 Z-score: 1141.5 E(): 9.9e-56 Smith-Waterman score: 1062; 35.106 identity in 564 aa overlap. ORF ftt0928c.


ensembl_gene_id: FTT_0931
symbol: FTT_0931
gene_biotype: protein_coding
description:
  Acetoacetate decarboxylase, fragment; Similar to Q8XR10 Probable acetoacetate decarboxylase from Ralstonia solanacearum (247 aa). FASTA: opt: 753 Z-score: 922.8 E(): 1.5e-43 Smith-Waterman score: 753; 56.158 identity in 203 aa overlap. CDS has no start codon due to a deletion at N-terminal ORF ftt0930c.


ensembl_gene_id: FTT_0932
symbol: FTT_0932
gene_biotype: protein_coding
description:
  Similar to Q8A1Q9 ROK family transcriptional repressor from Bacteroides thetaiotaomicron (298 aa). FASTA: opt: 482 Z-score: 605.6 E(): 7.7e-26 Smith-Waterman score: 482; 30.769 identity in 286 aa overlap ORF ftt0932.


ensembl_gene_id: FTT_0934c
symbol: bioD
gene_biotype: protein_coding
description:
  Bifunctional protein BirA, pseudogene; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. Belongs to the dethiobiotin synthetase family.


ensembl_gene_id: FTT_0935c
symbol: bioC
gene_biotype: protein_coding
description:
  Similar to AAO90525 Biotin synthesis protein BioC, putative from Coxiella burnetii (248 aa) FASTA: opt: 232 Z-score: 273.5 E(): 2.2e-07 Smith-Waterman score: 232; 23.293 identity in 249 aa overlap.


ensembl_gene_id: FTT_0936c
symbol: bioF
gene_biotype: protein_coding
description:
  Similar to AAO90527 8-amino-7-oxononanoate synthase (384 aa) fasta scores; opt: 763 Z-score: 912.3 E(): 5.8e-43 Smith-Waterman score: 763; 39.053identity in 338 aa overlap.


ensembl_gene_id: FTT_0937c
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: FTT_0938
symbol: bioA
gene_biotype: protein_coding
description:
  Similar to AAO90529 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase from Coxiella burnetii (442 aa). FASTA: opt: 1486 Z-score: 1733.9 E(): 9.9e-89 Smith-Waterman score: 1486; 50.588 identity in 425 aa overlap; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: FTT_0939c
symbol: add1
gene_biotype: protein_coding
description:
  Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism.


ensembl_gene_id: FTT_0940c
symbol: FTT_0940c
gene_biotype: protein_coding
description:
  Similar to Q88CI3 Conserved hypothetical protein from Pseudomonas putida (160 aa). FASTA: opt: 297 Z-score: 384.8 E(): 1.4e-13 Smith-Waterman score: 297; 32.653 identity in 147 aa overlap ORF ftt0940c.


ensembl_gene_id: FTT_0941c
symbol: FTT_0941c
gene_biotype: protein_coding
description:
  Lipase/esterase; Similar to Q97VW1 Lipase (lipP-1) from Sulfolobus solfataricus (305 aa). FASTA: opt: 488 Z-score: 622.4 E(): 8.9e-27 Smith-Waterman score: 488; 32.990 identity in 291 aa overlap. ORF ftt0941c.


ensembl_gene_id: FTT_0942c
symbol: folK
gene_biotype: protein_coding
description:
  Similar to Q821E2 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate synthase from Chlamydophila caviae (447 aa). FASTA: opt: 517 Z-score: 602.2 E(): 1.2e-25 Smith-Waterman score: 604; 30.664 identity in 437 aa overlap.


ensembl_gene_id: FTT_0943c
symbol: folB
gene_biotype: protein_coding
description:
  Similar to O84620 Probable dihydroneopterin aldolase (124 aa) fasta scores; opt: 191 Z-score: 262.4 E(): 9.2e-07 Smith-Waterman score: 191; 30.189identity in 106 aa overlap.


ensembl_gene_id: FTT_0944
symbol: FTT_0944
gene_biotype: protein_coding
description:
  AMP-binding family protein; Similar to Q9CHK3 O-succinylbenzoic acid-CoA ligase from Lactococcus lactis (420 aa). opt: 373 Z-score: 423.0 E(): 1e-15 Smith-Waterman score: 434; 27.692 identity in 390 aa overlap ORF ftt0944.


ensembl_gene_id: FTT_0945
symbol: pabB
gene_biotype: protein_coding
description:
  Chorismate binding family protein; Similar to Q8ESD8 Para-aminobenzoate synthase component II (585 aa) fasta scores; opt: 1108 Z-score: 1235.5 E(): 5.7e-61 Smith-Waterman score: 1108; 33.851 identity in 579 aa overlap. ORF ftt0945.


ensembl_gene_id: FTT_0946
symbol: trpG1
gene_biotype: protein_coding
description:
  Similarity to Q972A0 Putative anthranilate synthase component from Sulfolobus tokodaii (193 aa). FASTA: opt: 499 Z-score: 620.3 E(): 1.1e-26 Smith-Waterman score: 499; 40.741 identity in 189 aa overlap. Closely related to pabA proteins as they possess a shared domain feature.


ensembl_gene_id: FTT_0948c
symbol: FTT_0948c
gene_biotype: protein_coding
description:
  Major facilitator superfamily (MFS) transport protein, pseudogene; Similar to Q83D24 Major facilitator family transporter from Coxiella burnetii (437 aa). FASTA: opt: 293 Z-score: 313.6 bits: 67.1 E(): 1.4e-09 Smith-Waterman score: 295; 22.963 identity in 405 aa overlap. Contains a frameshift after aa 171 ORF ftt0947c.


ensembl_gene_id: FTT_0951c
symbol: folE
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, pseudogene; Similar to Q9X202 Hypothetical protein TM1674 from Thermotoga maritima (237 aa). FASTA: opt: 319 Z-score: 397.2 E(): 3.1e-14 Smith-Waterman score: 319; 30.317 identity in 221 aa overlap. Contains a frameshift after aa 79 ORF ftt0950c; Belongs to the GTP cyclohydrolase I family.


ensembl_gene_id: FTT_0952
symbol: rhlE
gene_biotype: protein_coding
description:
  Similar to Q8D6C6 Superfamily II DNA and RNA helicase from Vibrio vulnificus (509 aa). FASTA: opt: 1533 Z-score: 1649.9 E(): 4.8e-84 Smith-Waterman score: 1533; 56.036 identity in 439 aa overlap; Belongs to the DEAD box helicase family.


ensembl_gene_id: FTT_0953c
symbol: FTT_0953c
gene_biotype: protein_coding
description:
  Proton-dependent oligopeptide transport (POT) family protein; Similar to Q9KTB5 Proton/peptide symporter family protein from Vibrio cholerae (514 aa). FASTA: opt: 1329 Z-score: 1443.3 E(): 1.5e-72 Smith-Waterman score: 1329; 42.629identity in 502 aa overlap. ORF ftt0953c.


ensembl_gene_id: FTT_0954c
symbol: FTT_0954c
gene_biotype: protein_coding
description:
  Similar to O29392 Hypothetical protein AF0869 from Archaeoglobus fulgidus (108 aa). FASTA: opt: 272 Z-score: 377.5 E(): 3.9e-13 Smith-Waterman score: 272; 42.056 identity in 107 aa overlap ORF ftt0954c; Belongs to the UPF0145 family.


ensembl_gene_id: FTT_0955c
symbol: gor
gene_biotype: protein_coding
description:
  Similar to Q8DDA0 Pyruvate/2-oxoglutarate dehydrogenase from Vibrio vulnificus (451 aa). FASTA: opt: 1523 Z-score: 1808.2 E(): 7.9e-93 Smith-Waterman score: 1523; 52.655identity (53.72539ngapped) in 452 aa overlap.


ensembl_gene_id: FTT_0956c
symbol: FTT_0956c
gene_biotype: protein_coding
description:
  Similar to AAO50751 (Q86L42) Hypothetical protein from Dictyostelium discoideum (239 aa). FASTA: opt: 229 Z-score: 273.3 E(): 2.3e-07 Smith-Waterman score: 253; 29.437 identity in 231 aa overlap ORF ftt0956c.


ensembl_gene_id: FTT_0957c
symbol: FTT_0957c
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to Q83YE2 Shy8 from Streptomyces hygroscopicus (163 aa). FASTA: opt: 343 Z-score: 413.4 bits: 82.8 E(): 3.9e-15 Smith-Waterman score: 343; 36.420 identity in 162 aa overlap. ORF ftt0957c.


ensembl_gene_id: FTT_0958c
symbol: FTT_0958c
gene_biotype: protein_coding
description:
  Similar to Q9HWL9 Probable short-chain dehydrogenase from Pseudomonas aeruginosa (238 aa). FASTA: opt: 848 Z-score: 1032.8 E(): 1.1e-49 Smith-Waterman score: 848; 55.932 identity in 236 aa overlap ORF ftt0958c.


ensembl_gene_id: FTT_0959c
symbol: xthA
gene_biotype: protein_coding
description:
  Similar to Q83EM1 Exodeoxyribonuclease III from Coxiella burnetii (259 aa). FASTA: opt: 991 Z-score: 1173.5 E(): 1.6e-57 Smith-Waterman score: 991; 54.789 identity in 261 aa overlap.


ensembl_gene_id: FTT_0960
symbol: FTT_0960
gene_biotype: protein_coding
description:
  Simiar to Q8EAC2 Conserved hypothetical protein Shewanella oneidensis (371 aa). FASTA: opt: 607 Z-score: 717.9 E(): 3.9e-32 Smith-Waterman score: 607; 32.622 identity in 328 aa overlap ORF ftt0960.


ensembl_gene_id: FTT_0961
symbol: mdaB
gene_biotype: protein_coding
description:
  Similar to P40717 Modulator of drug activity B from Escherichia coli (193 aa). FASTA: opt: 900 Z-score: 1129.6 E(): 4.5e-55 Smith-Waterman score: 900; 63.542 identity in 192 aa overlap.


ensembl_gene_id: FTT_0962
symbol: FTT_0962
gene_biotype: protein_coding
description:
  Similar to Q87Z85 ThiJ/PfpI family protein from Pseudomonas syringae (225 aa). FASTA: opt: 570 Z-score: 665.3 E(): 3.3e-29 Smith-Waterman score: 570; 38.991 identity in 218 aa overlap ORF ftt0962.


ensembl_gene_id: FTT_0963c
symbol: aroG
gene_biotype: protein_coding
description:
  Phospho-2-dehydro-3-deoxyheptonate aldolase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).


ensembl_gene_id: FTT_0964c
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein, Ffh; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual com [...]


ensembl_gene_id: FTT_0965c
symbol: FTT_0965c
gene_biotype: protein_coding
description:
  Similar to Q928M9 Hypothetical protein lin2503 from Listeria innocua (279 aa). FASTA: opt: 733 Z-score: 821.7 E(): 6.4e-38 Smith-Waterman score: 733; 41.852 identity in 270 aa overlap. ORF ftt0965c.


ensembl_gene_id: FTT_0966
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: FTT_0968c
symbol: FTT_0968c
gene_biotype: protein_coding
description:
  Similar to Q8ZQE7 Putative inner membrane protein from Salmonella typhimurium (299 aa). FASTA: opt: 439 Z-score: 520.3 E(): 3.9e-21 Smith-Waterman score: 462; 28.808 identity in 302 aa overlap. Contains a frameshift after aa 128. Frameshift occurs at a heptanucleotide sequence and so could be part of a programmed translational frameshift ORF ftt0967c.


ensembl_gene_id: FTT_0969c
symbol: trkA
gene_biotype: protein_coding
description:
  Similar to Q9I7B0 Potassium uptake protein TrkA from Pseudomonas aeruginosa (457 aa). FASTA: opt: 825 Z-score: 902.6 E(): 2e-42 Smith-Waterman score: 825; 31.209 identity in 455 aa overlap.


ensembl_gene_id: FTT_0970
symbol: FTT_0970
gene_biotype: protein_coding
description:
  Similar to Q8PIG4 Hypothetical protein XAC2934 from Xanthomonas axonopodis (152 aa). FASTA: opt: 281 Z-score: 360.3 E(): 3.2e-12 Smith-Waterman score: 281; 33.588 identity in 131 aa overlap ORF ftt0970.


ensembl_gene_id: FTT_0971
symbol: sufB
gene_biotype: protein_coding
description:
  ABC transporter, membrane protein; Similar to Q8DLK1 ABC transporter subunit from Synechococcus elongatus (478 aa). FASTA: opt: 2281 Z-score: 2635.5 E(): 6e-139 Smith-Waterman score: 2281; 69.710 identity in 482 aa overlap ORF ftt0971.


ensembl_gene_id: FTT_0972
symbol: sufC
gene_biotype: protein_coding
description:
  Similar to Q8PIG2 ABC transporter ATP-binding protein from Xanthomonas axonopodis (254 aa). FASTA: opt: 1080 Z-score: 1117.5 E(): 2.1e-54 Smith-Waterman score: 1080; 65.041 identity in 246 aa overlap. ORF ftt0972.


ensembl_gene_id: FTT_0973
symbol: sufD
gene_biotype: protein_coding
description:
  Similar to Q83BX9 Hypothetical protein CBU1358 Coxiella burnetii (426 aa). FASTA: opt: 433 Z-score: 493.2 E(): 1.3e-19 Smith-Waterman score: 460; 29.282 identity in 362 aa overlap ORF ftt0973.


ensembl_gene_id: FTT_0975
symbol: FTT_0975
gene_biotype: protein_coding
description:
  Amidinotransferase family protein, pseudogene; Similar to Q826R2 Hypothetical protein from Streptomyces avermitilis (289 aa). FASTA: opt: 558 Z-score: 707.3 bits: 138.7 E(): 1.7e-31 Smith-Waterman score: 558; 34.351identity in 262 aa overlap. Contains an in-frame stop codon after aa 71 ORF ftt0974.


ensembl_gene_id: FTT_0976
symbol: trxA2
gene_biotype: protein_coding
description:
  Thioredoxin 1; Similar to P37395 Thioredoxin from Cyanidium caldarium (107 aa) fasta scores; opt: 333 Z-score: 452.0 E(): 2.5e-17 Smith-Waterman score: 333; 45.098identity in 102 aa overlap; Belongs to the thioredoxin family.


ensembl_gene_id: FTT_0977c
symbol: FTT_0977c
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to Q89DD5 Bsl7504 protein from Bradyrhizobium japonicum (99 aa). FASTA: opt: 209 Z-score: 292.0 E(): 2e-08 Smith-Waterman score: 209; 38.462 identity in 91 aa overlap ORF ftt0977c.


ensembl_gene_id: FTT_0979c
symbol: FTT_0979c
gene_biotype: protein_coding
description:
  Amino-acid permease, similarity to P39137 Amino-acid permease rocE from Bacillus subtilis (467 aa). FASTA: opt: 1272 Z-score: 1431.9 E(): 6.6e-72 Smith-Waterman score: 1272; 40.919 identity in 457 aa overlap. ORF ftt0979c.


ensembl_gene_id: FTT_0980
symbol: FTT_0980
gene_biotype: protein_coding
description:
  Similar to Q8UKI4 Aminotransferase, class II from Agrobacterium tumefaciens (413 aa). FASTA: opt: 486 Z-score: 559.2 E(): 2.7e-23 Smith-Waterman score: 554; 28.493 identity in 365 aa overlap ORF ftt0980.


ensembl_gene_id: FTT_0984c
symbol: mutT
gene_biotype: protein_coding
description:
  Similar to Q87SF6 Mutator MutT protein from Vibrio parahaemolyticus (132 aa). FASTA: opt: 268 Z-score: 340.9 E(): 3.9e-11 Smith-Waterman score: 268; 29.545identity in 132 aa overlap; Belongs to the Nudix hydrolase family.


ensembl_gene_id: FTT_0985
symbol: FTT_0985
gene_biotype: protein_coding
description:
  Similar to Q8EBZ9 Conserved hypothetical protein from Shewanella oneidensis (187 aa). FASTA: opt: 386 Z-score: 477.0 E(): 1e-18 Smith-Waterman score: 386; 36.022 identity in 186 aa overlap ORF ftt0985; Belongs to the UPF0301 (AlgH) family.


ensembl_gene_id: FTT_0986
symbol: FTT_0986
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.


ensembl_gene_id: FTT_0989
symbol: FTT_0989
gene_biotype: protein_coding
description:
  Similar to Q9I271 Hypothetical protein PA2044 from Pseudomonas aeruginosa (624 aa). FASTA: opt: 447 Z-score: 484.0 E(): 4.2e-19 Smith-Waterman score: 447; 22.203 identity in 572 aa overlap. ORF ftt0989.


ensembl_gene_id: FTT_0990
symbol: leuS
gene_biotype: protein_coding
description:
  Similar to Q83DY1 Leucyl-tRNA synthetase from Coxiella burnetii (820 aa). FASTA: opt: 3351 Z-score: 3699.1 695.4 E(): 3.8e-198 Smith-Waterman score: 3351; 58.952 identity in 821 aa overlap; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: FTT_0991
symbol: lptE
gene_biotype: protein_coding
description:
  Hypothetical lipoprotein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane.


ensembl_gene_id: FTT_0992
symbol: FTT_0992
gene_biotype: protein_coding
description:
  Similar to Q8A7A2 Putative membrane protein from Bacteroides thetaiotaomicron (391 aa). FASTA: opt: 908 Z-score: 1062.3 E(): 2.6e-51 Smith-Waterman score: 908; 37.637 identity in 364 aa overlap. ORF ftt0992.


ensembl_gene_id: FTT_0994c
symbol: FTT_0994c
gene_biotype: protein_coding
description:
  MRP like protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: FTT_0995
symbol: FTT_0995
gene_biotype: protein_coding
description:
  Major facilitator superfamily (MFS) transport protein; Similarity to Q8UDH1 MFS permease[proline/betaine] from Agrobacterium tumefaciens (443 aa). FASTA: opt: 727 Z-score: 824.0 E(): 4.8e-38 Smith-Waterman score: 828; 35.507identity in 414 aa overlap ORF ftt0995.


ensembl_gene_id: FTT_0997
symbol: ybhO
gene_biotype: protein_coding
description:
  Cardiolipin synthetase, pseudogene; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.


ensembl_gene_id: FTT_1000c
symbol: cobS
gene_biotype: protein_coding
description:
  Similar to Q83BJ7 Transporter, ZIP family from Coxiella burnetii (261 aa). FASTA: opt: 365 Z-score: 455.0 E(): 1.9e-17 Smith-Waterman score: 365; 32.593 identity in 270 aa overlap. Contains a frameshfit after aa 73 ORF ftt0999c.


ensembl_gene_id: FTT_1001
symbol: FTT_1001
gene_biotype: protein_coding
description:
  Regulatory protein; Similar to Q8ZJ15 Putative regulatory protein from Yersinia pestis (169 aa). FASTA: opt: 313 Z-score: 406.8 E(): 9.2e-15 Smith-Waterman score: 313; 36.429 identity in 140 aa overlap. ORF ftt1001; Belongs to the Fur family.


ensembl_gene_id: FTT_1002c
symbol: pheT
gene_biotype: protein_coding
description:
  Similar to SYFB_ECOL6 (P59664) Phenylalanyl-tRNA synthetase beta from Escherichia coli (795 aa). FASTA: opt: 2214 Z-score: 2665.4 E(): 1.4e-140 Smith-Waterman score: 2214; 45.125 identity in 800 aa overlap.


ensembl_gene_id: FTT_1003c
symbol: pheS
gene_biotype: protein_coding
description:
  Similar to Q883H8 Phenylalanyl-tRNA synthetase, alpha subunit from Pseudomonas syringae (pv. tomato) (338 aa). FASTA: opt: 1579 Z-score: 1874.2 E(): 1.7e-96 Smith-Waterman score: 1579; 64.392 identity in 337 aa overlap.


ensembl_gene_id: FTT_1004c
symbol: FTT_1004c
gene_biotype: protein_coding
description:
  Similar to Q9RX03 Hypothetical protein DR0512 from Deinococcus radiodurans (301 aa). Similar to opt: 577 Z-score: 644.6 E(): 5.1e-28 Smith-Waterman score: 577; 33.094 identity in 278 aa overlap. ORF ftt1004c.


ensembl_gene_id: FTT_1005c
symbol: yhiP
gene_biotype: protein_coding
description:
  Proton-dependent oligopeptide transporter (POT) family protein; Similar to Q8X5Q8 Putative transport protein from Escherichia coli (489 aa). FASTA: opt: 1050 Z-score: 1137.7 E(): 1.8e-55 Smith-Waterman score: 1050; 35.569 identity in 492 aa overlap.


ensembl_gene_id: FTT_1010
symbol: FTT_1010
gene_biotype: protein_coding
description:
  Helix-turn-helix family protein; Similar to Q81BZ8 Transcriptional regulator,Cro/CI family protein from Bacillus cereus (strain ATCC 14579 / DSM 31) (71 aa). FASTA: opt: 263 Z-score: 391.6 E(): 6.4e-14 Smith-Waterman score: 263; 60.606 identity in 66 aa overlap. ORF ftt1010.


ensembl_gene_id: FTT_1013c
symbol: ruvB
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, pseudogene; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: FTT_1014c
symbol: FTT_1014c
gene_biotype: protein_coding
description:
  Short chain dehydrogenase family protein; Similar to YWFD_BACSU (P39640) Hypothetical oxidoreductase ywfD from Bacillus subtilis (255 aa). FASTA: opt: 410 Z-score: 474.7 E(): 1.5e-18 Smith-Waterman score: 471; 38.710 identity in 248 aa overlap. ORF ftt1014c.


ensembl_gene_id: FTT_1016c
symbol: FTT_1016c
gene_biotype: protein_coding
description:
  Similar to Q9JQY7 Putative lipase (GDSL lipase family protein) from Neisseria meningitidis (213 aa). FASTA: opt: 358 Z-score: 439.3 E(): 1.4e-16 Smith-Waterman score: 358; 32.203 identity in 177 aa overlap. ORF ftt1016c.


ensembl_gene_id: FTT_1018c
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: FTT_1020c
symbol: FTT_1020c
gene_biotype: protein_coding
description:
  Similar to Q83EA0 Amino acid permease family protein from Coxiella burnetii (531 aa). FASTA: opt: 925 Z-score: 996.3 E(): 1.3e-47 Smith-Waterman score: 947; 29.379 identity in 531 aa overlap. ORF ftt1020c.


ensembl_gene_id: FTT_1021c
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: FTT_1022c
symbol: FTT_1022c
gene_biotype: protein_coding
description:
  Similar to Y125_PYRHO (O57865) Hypothetical protein PH0125 from Pyrococcus horikoshii (257 aa) (from 1-260). FASTA: opt: 520 Z-score: 632.1 E(): 2.6e-27 Smith-Waterman score: 520; 35.600 identity in 250 aa overlap AND Q97VT8 Lipase (lipP-2) (EC 3.1.1.3) from Sulfolobus solfataricus (311 aa) (from 300-610). FASTA: opt: 613 Z-score: 743.7 E(): 1.6e-33 Smith-Waterman score: 613; 34.586 identity in 266 aa overlap Possible merged protein due to a missing stop codon between 2 CDSs? ORF ftt1022c.


ensembl_gene_id: FTT_1023c
symbol: FTT_1023c
gene_biotype: protein_coding
description:
  Similar to Q8EGL6 Fumarylacetoacetate hydrolase family protein from Shewanella oneidensis (208 aa). FASTA: opt: 599 Z-score: 746.5 E(): 1.1e-33 Smith-Waterman score: 599; 51.913 identity in 183 aa overlap. ORF ftt1023c.


ensembl_gene_id: FTT_1024c
symbol: yhbG
gene_biotype: protein_coding
description:
  Similar to Q8ZB44 Probable ABC transporter ATP-binding protein from Yersinia pestis (241 aa). FASTA: opt: 1091 Z-score: 1233.5 E(): 8.2e-61 Smith-Waterman score: 1091; 65.690 identity in 239 aa overlap.


ensembl_gene_id: FTT_1027c
symbol: yrbI
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family.


ensembl_gene_id: FTT_1028c
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: FTT_1029
symbol: dacD
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase (Penicillin binding protein) family protein; Similar to Q87VW4 D-alanyl-D-alanine carboxypeptidase from Pseudomonas syringae (pv. tomato) (386 aa). FASTA: opt: 602 Z-score: 704.0 E(): 2.5e-31 Smith-Waterman score: 794; 36.409 identity in 401 aa overlap; Belongs to the peptidase S11 family.


ensembl_gene_id: FTT_1030
symbol: FTT_1030
gene_biotype: protein_coding
description:
  Similar to YE87_NITEU (Q82UJ7) Hypothetical UPF0250 protein NE1487 from Nitrosomonas europaea (87 aa). FASTA: opt: 235 Z-score: 328.5 E(): 2.1e-10 Smith-Waterman score: 235; 36.471 identity in 85 aa overlap. ORF ftt1030.


ensembl_gene_id: FTT_1031
symbol: lipB
gene_biotype: protein_coding
description:
  Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: FTT_1034c
symbol: ndh
gene_biotype: protein_coding
description:
  Glycosyl hydrolases family 31 protein,pseudogene; Similar to Q8ZKT9 Putative alpha-xylosidase from Salmonella typhimurium (678 aa). FASTA: opt: 2551 Z-score: 3058.2 E(): 1.9e-162 Smith-Waterman score: 2551; 54.364 identity in 653 aa overlap. Contains an in-frame stop codon.


ensembl_gene_id: FTT_1035c
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase sigma-70 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: FTT_1036c
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: FTT_1037c
symbol: FTT_1037c
gene_biotype: protein_coding
description:
  Similar to Q87SL6 Conserved hypothetical protein from Vibrio parahaemolyticus (147 aa). FASTA: opt: 473 Z-score: 548.0 E(): 1.2e-22 Smith-Waterman score: 473; 47.586 identity in 145 aa overlap. ORF ftt1037c.


ensembl_gene_id: FTT_1038c
symbol: rpsU3
gene_biotype: protein_coding
description:
  Similar to RS21_WIGBR (Q8D284) 30S ribosomal protein S21 fran Wigglesworthia glossinidia brevipalpis (71 aa). FASTA: opt: 285 Z-score: 425.2 E(): 8.6e-16 Smith-Waterman score: 285; 70.690 identity in 58 aa overlap; Belongs to the bacterial ribosomal protein bS21 family.


ensembl_gene_id: FTT_1039
symbol: dacB1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase (Penicillin binding protein) family protein; Similar to Q83FD1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase from Coxiella burnetii (477 aa). FASTA: opt: 654 Z-score: 780.3 E(): 1.4e-35 Smith-Waterman score: 654; 29.436 identity in 479 aa overlap.


ensembl_gene_id: FTT_1040
symbol: FTT_1040
gene_biotype: protein_coding
description:
  Similar to Q8EBG1 Conserved hypothetical protein from Shewanella oneidensis (205 aa). FASTA: opt: 610 Z-score: 776.5 E(): 2.3e-35 Smith-Waterman score: 610; 45.810 identity in 179 aa overlap. ORF ftt1040.


ensembl_gene_id: FTT_1041
symbol: FTT_1041
gene_biotype: protein_coding
description:
  Similar to Q8ESG1 Hypothetical conserved protein from Oceanobacillus iheyensis (134 aa). FASTA: opt: 215 Z-score: 303.3 E(): 5.3e-09 Smith-Waterman score: 215; 32.773 identity in 119 aa overlap. ORF ftt1041.


ensembl_gene_id: FTT_1042
symbol: ttcA1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.


ensembl_gene_id: FTT_1043
symbol: FTT_1043
gene_biotype: protein_coding
description:
  FKBP-type peptidyl-prolyl cis-trans isomerase family protein; Similar to O32766 Macrophage infectivity potentiator from Legionella hackeliae (249 aa). FASTA: opt: 235 Z-score: 273.3 E(): 2.5e-07 Smith-Waterman score: 343; 27.599 identity in 279 aa overlap. ORF ftt1043.


ensembl_gene_id: FTT_1044c
symbol: ispB
gene_biotype: protein_coding
description:
  Similar to Q8EB79 Octaprenyl-diphosphate synthase from Shewanella oneidensis (323 aa). FASTA: opt: 1117 Z-score: 1360.2 E(): 7.1e-68 Smith-Waterman score: 1117; 53.704 identity in 324 aa overlap; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: FTT_1050c
symbol: cysN
gene_biotype: protein_coding
description:
  Adenylylsulfate kinase, fragment; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.


ensembl_gene_id: FTT_1056c
symbol: rluB
gene_biotype: protein_coding
description:
  Similar to Q8ZEG0 Ribosomal large subunit pseudouridine synthase B from Yersinia pestis (318 aa). FASTA: opt: 938 Z-score: 1164.9 E(): 5.4e-57 Smith-Waterman score: 938; 56.705identity in 261 aa overlap; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: FTT_1057c
symbol: FTT_1057c
gene_biotype: protein_coding
description:
  Type IV pili lipoprotein; Similar to Q9KRM4 Fimbrial biogenesis and twitching motility protein, putative from Vibrio cholerae (237 aa). FASTA: opt: 249 Z-score: 293.4 E(): 1.9e-08 Smith-Waterman score: 249; 25.346 identity in 217 aa overlap. Tetratrico peptide repeat (TPR) containing protein. Shows a weak similarity to the lipoprotein pilF (Pseudomonas) that has an N-terminal type II (lipoprotein) signal sequence, followed by six tandem degenerated 34-amino acid repeats, which are involved in protein-protein interactions. ORF ftt1057c.


ensembl_gene_id: FTT_1058c
symbol: rlmN
gene_biotype: protein_coding
description:
  Radical SAM superfamily protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: FTT_1059c
symbol: dnaB
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: FTT_1061c
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: FTT_1063
symbol: hemF
gene_biotype: protein_coding
description:
  Coproporphyinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.


ensembl_gene_id: FTT_1068c
symbol: res
gene_biotype: protein_coding
description:
  Similar to Q8RG91 Type III restriction-modification system restriction subunit from Fusobacterium nucleatum (subsp. nucleatum) (997 aa). FASTA: opt: 2647 Z-score: 2741.6 E(): 7.4e-145 Smith-Waterman score: 2729; 46.356 identity in 1029 aa overlap.


ensembl_gene_id: FTT_1071c
symbol: FTT_1071c
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, pseudogene; Similar to EAA25085 ATP-dependent helicase HEPA from Fusobacterium nucleatum subsp. vincentii ATCC 49256 (1070 aa). FASTA: opt: 3128 Z-score: 3170.3 E(): 9.7e-169 Smith-Waterman score: 3128; 50.250 identity in 1001 aa overlap. Contains a frameshift after aa 974. Frameshift occurs at a heptanucleotide sequence and so could be part of a programmed translational frameshift ORF ftt1070c.


ensembl_gene_id: FTT_1075
symbol: FTT_1075
gene_biotype: protein_coding
description:
  Transcriptional regulator; Similar to Y4MF_RHISN (P55565) Hypothetical transcriptional regulator y4mF from Rhizobium sp. (strain NGR234) (76 aa). FASTA: opt: 205 Z-score: 292.4 E(): 2.1e-08 Smith-Waterman score: 205; 47.059identity in 68 aa overlap. ORF ftt1075.


ensembl_gene_id: FTT_1076
symbol: hipA
gene_biotype: protein_coding
description:
  Transcription regulator; Similar to Q82V03 Possible HipA protein from Nitrosomonas europaea (429 aa). FASTA: opt: 1021 Z-score: 1249.8 E(): 1e-61 Smith-Waterman score: 1021; 41.162 identity in 413 aa overlap.


ensembl_gene_id: FTT_1077c
symbol: FTT_1077c
gene_biotype: protein_coding
description:
  Hypothetical protein; Putative pseudogene. Bases 3-128 similar to the same homolog as for next upstream ORF, FRPC_NEIMC (P55127) Iron-regulated protein frpC from Neisseria meningitidis (serogroup C) (1829 aa). FASTA: opt: 118 Z-score: 143.0 bits: 35.9 E(): 4.5 Smith-Waterman score: 120; 26.351 identity in 148 aa overlap (3-128:582-728). ORF ftt1077c.


ensembl_gene_id: FTT_1078c
symbol: FTT_1078c
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to FRPC_NEIMC (P55127) Iron-regulated protein frpC from Neisseria meningitidis (serogroup C) (1829 aa). FASTA: opt: 567 Z-score: 644.8 E(): 5.1e-28 Smith-Waterman score: 567; 53.416identity in 161 aa overlap (103-260:414-574). Putative pseudogene. Bases 103-260 similar to the same homolog as for the next downstream ORF. ORF ftt1078c.


ensembl_gene_id: FTT_1085
symbol: FTT_1085
gene_biotype: protein_coding
description:
  Similar to YM90_SHEON (Q8EES8) Hypothetical UPF0176 protein SO229 from Shewanella oneidensis (333 aa). FASTA: initn: 1561 init1: 1472 opt: 1479 Z-score: 1729.8 E(): 1.9e-88 Smith-Waterman score: 1479; 63.636identity in 330 aa overlap. ORF ftt1085.


ensembl_gene_id: FTT_1086c
symbol: FTT_1086c
gene_biotype: protein_coding
description:
  Similar to Q8EFU7 Conserved hypothetical protein from Shewanella oneidensis (279 aa). FASTA: 351 opt: 789 Z-score: 963.7 E(): 8.8e-46 Smith-Waterman score: 789; 45.290 identity in 276 aa overlap. ORF ftt1086c; Belongs to the CvfB family.


ensembl_gene_id: FTT_1087c
symbol: rep
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction.


ensembl_gene_id: FTT_1089
symbol: FTT_1089
gene_biotype: protein_coding
description:
  Isochorismatase hydrolase family protein; Similar to Q8EW31 Hypothetical protein from Mycoplasma penetrans (194 aa). FASTA: opt: 235 Z-score: 294.7 E(): 1.6e-08 Smith-Waterman score: 235; 31.515 identity in 165 aa overlap. ORF ftt1089.


ensembl_gene_id: FTT_1090
symbol: pnuC-2
gene_biotype: protein_coding
description:
  Conserved hypothetical membrane protein; Similar to Q8A546 Putative membrane transporter involved in nicotinamide mononucleotide transport from Bacteroides thetaiotaomicron (188 aa). FASTA: opt: 285 Z-score: 336.8 E(): 7.2e-11 Smith-Waterman score: 302; 29.592 identity in 196 aa overlap. ORF ftt1090.


ensembl_gene_id: FTT_1091
symbol: FTT_1091
gene_biotype: protein_coding
description:
  Isochorismatase hydrolase family protein; Similar to Q9AD62 Putative hydrolase (193 aa). FASTA: opt: 251 Z-score: 311.7 E(): 1.8e-09 Smith-Waterman score: 251; 32.075identity in 159 aa overlap. ORF ftt1091.


ensembl_gene_id: FTT_1093c
symbol: talA
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 1 subfamily.


ensembl_gene_id: FTT_1094c
symbol: FTT_1094c
gene_biotype: protein_coding
description:
  Similar to Q83DX0 Cytosol aminopeptidase family protein from Coxiella burnetii (458 aa). FASTA: opt: 1273 Z-score: 1536.1 E(): 1.1e-77 Smith-Waterman score: 1273; 41.830 identity in 459 aa overlap. ORF ftt1094c; Belongs to the peptidase M17 family.


ensembl_gene_id: FTT_1095c
symbol: FTT_1095c
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to Q88DA4 Outer membrane efflux protein from Pseudomonas putida (strain KT2440) (477 aa). FASTA: opt: 405 Z-score: 484.1 E(): 4.5e-19 Smith-Waterman score: 405; 22.907 identity in 454 aa overlap. Not a membrane protein. ORF ftt1095c.


ensembl_gene_id: FTT_1096c
symbol: alaS
gene_biotype: protein_coding
description:
  Alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: FTT_1099c
symbol: FTT_1099c
gene_biotype: protein_coding
description:
  UvrD/REP helicase family protein, pseudogene; Similar to REP_BUCAI (P57654) ATP-dependent DNA helicase rep from Buchnera aphidicola (subsp. Acyrthosiphon pisum) (Acyrthosiphon pisum symbiotic bacterium) (645 aa). FASTA: opt: 662 Z-score: 713.3 bits: 142.3 E(): 7.7e-32 Smith-Waterman score: 662; 28.502 identity in 621 aa overlap. Contains a frameshift after aa 167. Frameshift occurs at a heptanucleotide sequence and so could be part of a programmed translational frameshift. ORF ftt1098c.


ensembl_gene_id: FTT_1100
symbol: rsfS
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: FTT_1103
symbol: yjeS
gene_biotype: protein_coding
description:
  Similar to O32828 Macrophage infectivity potentiator from Legionella oakridgensis (234 aa). FASTA: opt: 191 Z-score: 250.2 E(): 4.8e-06 Smith-Waterman score: 191; 35.484identity in 93 aa overlap. Deletion at carboxy terminal truncates this protein ORF ftt1102.


ensembl_gene_id: FTT_1105c
symbol: msrA1
gene_biotype: protein_coding
description:
  Major facilitator superfamily (MFS) transport protein, pseudogene; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: FTT_1106
symbol: tspO
gene_biotype: protein_coding
description:
  Tryptophan-rich sensory protein; Similar to Q8TID9 Benzodiazepine receptor TspO from Methanosarcina acetivorans (160 aa). FASTA: opt: 417 Z-score: 464.9 E(): 5.3e-18 Smith-Waterman score: 417; 40.994 identity in 161 aa overlap.


ensembl_gene_id: FTT_1108
symbol: betT
gene_biotype: protein_coding
description:
  Betaine/carnitine/choline transporter (BCCT) family protein, pseudogene; Similar to Q8L2B3 (Q8L2B3) Choline transporter from Proteus vulgaris (665 aa). FASTA: opt: 1958 Z-score: 2178.1 E(): 2e-113 Smith-Waterman score: 2111; 47.546 identity in 652 aa overlap. Contains a frameshift after aa 133. Frameshift occurs at a heptanucleotide sequence and so could be part of a programmed translational frameshift; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: FTT_1109
symbol: FTT_1109
gene_biotype: protein_coding
description:
  Similar to Q8U768 Choloylglycine hydrolase family protein from Agrobacterium tumefaciens (strain C58 / ATCC 33970) (355 aa). FASTA: opt: 362 Z-score: 436.7 E(): 2e-16 Smith-Waterman score: 424; 28.956 identity in 297 aa overlap. ORF ftt1109.


ensembl_gene_id: FTT_1112c
symbol: rpoH
gene_biotype: protein_coding
description:
  RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.


ensembl_gene_id: FTT_1114c
symbol: secF
gene_biotype: protein_coding
description:
  Preprotein translocase, subunit F, membrane protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: FTT_1115c
symbol: secD
gene_biotype: protein_coding
description:
  Preprotein translocase, subunit D, membrane protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: FTT_1116c
symbol: yajC
gene_biotype: protein_coding
description:
  Preprotein translocase family protein; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.


ensembl_gene_id: FTT_1117c
symbol: FTT_1117c
gene_biotype: protein_coding
description:
  Isochorismatase hydrolase family protein; Similar to Q9HZE2 Hypothetical protein PA3066 from Pseudomonas aeruginosa (190 aa). FASTA: opt: 359 Z-score: 477.3 E(): 1.1e-18 Smith-Waterman score: 359; 35.638 identity in 188 aa overlap. ORF ftt1117c.


ensembl_gene_id: FTT_1118c
symbol: FTT_1118c
gene_biotype: protein_coding
description:
  Similar to Q9KKY7 Hypothetical protein VCA0963 from Vibrio cholerae (307 aa). FASTA: opt: 340 Z-score: 385.2 E(): 1.5e-13 Smith-Waterman score: 340; 22.603 identity in 292 aa overlap. ORF ftt1118c.


ensembl_gene_id: FTT_1119
symbol: FTT_1119
gene_biotype: protein_coding
description:
  LysR transcriptional regulator family protein; Similar to Q8D460 Transcriptional regulator from Vibrio vulnificus (296 aa). FASTA: opt: 459 Z-score: 575.9 E(): 3.5e-24 Smith-Waterman score: 459; 29.197 identity in 274 aa overlap. ORF ftt1119; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: FTT_1120c
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form th [...]


ensembl_gene_id: FTT_1123
symbol: ygiH
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: FTT_1124
symbol: metN
gene_biotype: protein_coding
description:
  D-methionine transport protein, ABC transporter,ATP-binding subunit; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: FTT_1125
symbol: metIQ
gene_biotype: protein_coding
description:
  D-methionine binding transport protein, ABC transporter, membrane and periplasmic protein; Similar to METQ_SALTI (Q8Z992) D-methionine-binding lipoprotein metQ [Precursor] from Salmonella typhi (271 aa). FASTA: opt: 815 Z-score: 926.6 E(): 1e-43 Smith-Waterman score: 815; 51.020identity in 245 aa overlap. The FASTA-hits do not include the first 220 aa. Probably two genes, metI and metQ, in other organisms.


ensembl_gene_id: FTT_1126
symbol: FTT_1126
gene_biotype: protein_coding
description:
  Aromatic amino acid transporter of the HAAAP family; Similar to Q83BG9 Tryptophan/tyrosine permease family protein from Coxiella burnetii (426 aa). FASTA: opt: 560 Z-score: 604.8 E(): 8.5e-26 Smith-Waterman score: 560; 27.750identity in 400 aa overlap. ORF ftt1126.


ensembl_gene_id: FTT_1127
symbol: FTT_1127
gene_biotype: protein_coding
description:
  Rhodanese-like family protein; Similar to Q83F83 Rhodanese domain protein from Coxiella burnetii (124 aa). FASTA: opt: 447 Z-score: 559.4 E(): 2.9e-23 Smith-Waterman score: 447; 51.240 identity in 121 aa overlap. ORF ftt1127.


ensembl_gene_id: FTT_1128
symbol: ispF
gene_biotype: protein_coding
description:
  2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (By similarity).


ensembl_gene_id: FTT_1129c
symbol: FTT_1129c
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to CPHA_ANAVA (O86109) Cyanophycin synthetase from Anabaena variabilis (901 aa). FASTA: opt: 2470 Z-score: 2850.7 E(): 6.8e-151 Smith-Waterman score: 2506; 46.787 identity in 887 aa overlap. Probable paralog of cphA since the protein sequences show considerable divergence and gene length differ. ORF ftt1129c.


ensembl_gene_id: FTT_1130c
symbol: cphA
gene_biotype: protein_coding
description:
  Similar to CPHA_ANAVA (O86109) Cyanophycin synthetase (EC 6.-.-.-) from Anabaena variabilis (901 aa). FASTA: opt: 2470 Z-score: 2850.7 E(): 6.8e-151 Smith-Waterman score: 2506; 46.787 identity in 887 aa overlap.


ensembl_gene_id: FTT_1132c
symbol: glpQ
gene_biotype: protein_coding
description:
  Molybdopterin binding family protein, fragment; Similar to Q97D94 Competence-damage inducible protein, CINA, from Clostridium acetobutylicum (411 aa). FASTA: opt: 398 Z-score: 508.8 E(): 1.9e-20 Smith-Waterman score: 398; 31.687 identity in 243 aa overlap. Appears to be a deletion at carboxy terminus ORF ftt1131.


ensembl_gene_id: FTT_1133
symbol: pilB
gene_biotype: protein_coding
description:
  Type IV pili nucleotide binding protein, ABC transporter, ATP-binding protein; Similar to O68431 Pilus assembly protein PilB from Pseudomonas syringae (pv. tomato) (575 aa). FASTA: opt: 1381 Z-score: 1521.6 E(): 7.3e-77 Smith-Waterman score: 1592; 44.597 identity in 583 aa overlap. PilB is required for pili assembly. Homologous to pilT but which has the opposite effect. Homologs exists in other systems.


ensembl_gene_id: FTT_1134
symbol: pilC
gene_biotype: protein_coding
description:
  Type IV pili polytopic inner membrane protein; Similar to Q888U1 Type IV pilus biogenesis protein PilC from Pseudomonas syringae (pv. tomato) (405 aa). FASTA: opt: 1017 Z-score: 1153.2 E(): 2.4e-56 Smith-Waterman score: 1017; 39.055identity in 402 aa overlap. Termed pilF in N. gonorrhoeae.


ensembl_gene_id: FTT_1136c
symbol: FTT_1136c
gene_biotype: protein_coding
description:
  Similar to Q8EAU9 Conserved hypothetical protein from Shewanella oneidensis (390 aa). FASTA: opt: 1502 Z-score: 1709.5 E(): 2.3e-87 Smith-Waterman score: 1502; 57.584 identity in 389 aa overlap. Contains two frameshifts after aa 20 and 291. Frameshift occurs at a heptanucleotide sequence and so could be part of a programmed translational frameshift ORF ftt1135c.


ensembl_gene_id: FTT_1138
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: FTT_1140
symbol: phrB
gene_biotype: protein_coding
description:
  Deoxyribodipyrimidine photolyase, pseudogene; Similar to Q83CE4 Deoxyribodipyrimidine photolyase-class I from Coxiella burnetii (472 aa). FASTA: opt: 1369 Z-score: 1649.6 E(): 5.4e-84 Smith-Waterman score: 1369; 43.103identity in 464 aa overlap. Contains a frameshift after aa 86.


ensembl_gene_id: FTT_1145
symbol: chaB
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase/reductase (SDR) family protein, pseudogene; Similar to Q9RYF4 Oxidoreductase, short-chain dehydrogenase family from Deinococcus radiodurans (390 aa). FASTA: opt: 913 Z-score: 1084.4 E(): 1.6e-52 Smith-Waterman score: 913; 50.360 identity in 278 aa overlap. Contains a frameshift after aa 153. ameshift occurs at a heptanucleotide sequence and so could be part of a programmed translational frameshift ORF ftt1144.


ensembl_gene_id: FTT_1147c
symbol: dfp
gene_biotype: protein_coding
description:
  Aldose 1-epimerase (pseudogene); Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: FTT_1148c
symbol: yjhB
gene_biotype: protein_coding
description:
  Major facilitator superfamily (MFS) transport protein; Similar to YJHB_ECOLI (P39352) Hypothetical metabolite transport protein yjhB from Escherichia coli (405 aa). FASTA: opt: 383 Z-score: 393.4 E(): 5.1e-14 Smith-Waterman score: 383; 26.425 identity in 386 aa overlap.


ensembl_gene_id: FTT_1149c
symbol: FTT_1149c
gene_biotype: protein_coding
description:
  Amino acid transporter family protein; Similar to Q8XT33 Probable amino-acid permease transmembrane from Ralstonia solanacearum (Pseudomonas solanacearum) (543 aa). FASTA: opt: 960 Z-score: 1077.6 E(): 3.9e-52 Smith-Waterman score: 969; 35.730 identity in 445 aa overlap. ORF ftt1149c.


ensembl_gene_id: FTT_1150c
symbol: putA
gene_biotype: protein_coding
description:
  Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: FTT_1151c
symbol: sdhE
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH and other flavinylated proteins as well.


ensembl_gene_id: FTT_1154c
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthetase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.


ensembl_gene_id: FTT_1155c
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase I; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: FTT_1156c
symbol: pilQ
gene_biotype: protein_coding
description:
  Type IV pilin multimeric outer membrane protein; Similar to Q8EK21 Type IV pilus biogenesis protein PilQ from Shewanella oneidensis (684 aa). FASTA: opt: 1014 Z-score: 1145.2 E(): 6.8e-56 Smith-Waterman score: 1014; 31.658 identity in 597 aa overlap. The nearest gene neighbours show similarity to pilN, pilO and pilP. Also required for type II protein secretion.


ensembl_gene_id: FTT_1157c
symbol: FTT_1157c
gene_biotype: protein_coding
description:
  Type IV pili lipoprotein; Similar to Q8DCM3 Tfp pilus assembly protein PilP from Vibrio vulnificus (170 aa). FASTA: opt: 176 Z-score: 222.1 E(): 0.00018 Smith-Waterman score: 176; 29.921 identity in 127 aa overlap. Weak similarity to the lipoprotein pilP, which appears to be required for stabilisation of pilQ multimer formation. The nearest gene neighbours show similarity to pilN, pilO and pilQ, which indicates that this protein could be pilP ORF ftt1157c.


ensembl_gene_id: FTT_1158c
symbol: FTT_1158c
gene_biotype: protein_coding
description:
  Type IV pili glycosylation protein; Similar to Q8PH76 Fimbrial assembly membrane protein from Xanthomonas axonopodis (pv. citri) (221 aa). FASTA: opt: 144 Z-score: 177.4 E(): 0.055 Smith-Waterman score: 144; 25.946 identity in 185 aa overlap. Weak similarity to type IV pili glycosylation protein (pilO). The nearest gene neighbours show similarity to pilN, pilP and pilQ, which indicates that this protein could be pilO. PilO is required for glycosylation of Pseudomonas aeruginosa pilin. ORF ftt1158c.


ensembl_gene_id: FTT_1159c
symbol: FTT_1159c
gene_biotype: protein_coding
description:
  Type IV pili associated protein; Similar to Q52540 Membrane protein PilN from Pseudomonas syringae (199 aa). FASTA: opt: 143 Z-score: 182.6 E(): 0.028 Smith-Waterman score: 143; 23.704 identity in 135 aa overlap. The nearest gene neighbours show similarity to pilO, pilP and pilQ, which indicates that this protein could be pilN. PilN is also required for type II protein secretion. ORF ftt1159c.


ensembl_gene_id: FTT_1161
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: FTT_1163c
symbol: FTT_1163c
gene_biotype: protein_coding
description:
  FAD-binding family protein, pseudogene; Similar to Q88DT2 D-lactate dehydrogenase, putative from Pseudomonas putida (strain KT2440) (936 aa). FASTA: opt: 1665 Z-score: 1856.9 E(): 1.5e-95 Smith-Waterman score: 2125; 37.763identity in 903 aa overlap. Contains an in-frame stop codon after aa 312 and a frameshift after aa 431 ORF ftt1162c.


ensembl_gene_id: FTT_1164c
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: FTT_1165c
symbol: aspC2
gene_biotype: protein_coding
description:
  Similar to Q83E19 Aspartate aminotransferase from Coxiella burnetii (394 aa). FASTA: opt: 1067 Z-score: 1292.7 E(): 4.1e-64 Smith-Waterman score: 1067; 41.645 identity in 389 aa overlap.


ensembl_gene_id: FTT_1166c
symbol: FTT_1166c
gene_biotype: protein_coding
description:
  Glutamine amidotransferases class-II family protein; Similar to Q8D5X6 Predicted glutamine amidotransferase from Vibrio vulnificus (253 aa). FASTA: opt: 654 Z-score: 813.9 E(): 1.9e-37 Smith-Waterman score: 654; 42.466identity in 219 aa overlap. ORF ftt1166c.


ensembl_gene_id: FTT_1167c
symbol: yeaZ
gene_biotype: protein_coding
description:
  Glycoprotease family protein; Similar to Q8EE04 (Q8EE04) Conserved hypothetical protein from Shewanella oneidensis (236 aa). FASTA: opt: 349 Z-score: 425.3 E(): 8.5e-16 Smith-Waterman score: 359; 32.273 identity in 220 aa overlap. ORF ftt1167c.


ensembl_gene_id: FTT_1168c
symbol: nagA
gene_biotype: protein_coding
description:
  Similar to Q99VS2 NagA protein (Probable N-acetylglucosamine-6-phosphate deacetylase) from Staphylococcus aureus (393 aa). FASTA: opt: 1006 Z-score: 1213.0 E(): 1.1e-59 Smith-Waterman score: 1006; 43.523 identity in 386 aa overlap.


ensembl_gene_id: FTT_1169
symbol: ylqF
gene_biotype: protein_coding
description:
  GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: FTT_1171c
symbol: hsdM
gene_biotype: protein_coding
description:
  DNA-methyltransferase, type I restriction-modification enzyme subunit M; Similar to Q8RN13 HsdM from Campylobacter jejuni (494 aa). FASTA: opt: 2001 Z-score: 2374.3 E(): 2.3e-124 Smith-Waterman score: 2001; 59.719 identity in 499 aa overlap.


ensembl_gene_id: FTT_1172c
symbol: csp
gene_biotype: protein_coding
description:
  Similar to Q9HSS3 Cold shock protein from Halobacterium sp. (strain NRC-1 / ATCC 700922 / JCM 11081) (74 aa). FASTA: opt: 170 Z-score: 221.1 E(): 0.0002 Smith-Waterman score: 170; 40.323identity in 62 aa overlap. CDS is longer than FASTA matches. Homology is to first 70 aa of protein only and no matches found for 2nd half of CDS.


ensembl_gene_id: FTT_1174c
symbol: hsdS
gene_biotype: protein_coding
description:
  Type I restriction-modification enzyme, DNA specificity subunit S, pseudogene; Similar to CAD76983 Type I restriction enzyme EcoEI specificity protein from Rhodopirellula baltica (550 aa). FASTA: opt: 492 Z-score: 583.4 E(): 1.3e-24 Smith-Waterman score: 492; 42.929 identity in 198 aa overlap. Contains an in-frame stop codon at aa 48 and a frameshift at aa 133.


ensembl_gene_id: FTT_1177c
symbol: hsdR1
gene_biotype: protein_coding
description:
  Type I restriction enzyme subunit R, pseudogene; Similar to Q8RIX1 HsdR from Campylobacter jejuni (769 aa). FASTA: opt: 2132 Z-score: 2421.3 E(): 5.6e-127 Smith-Waterman score: 2642; 53.402 identity in 779 aa overlap. Contains a frameshift after aa 61 and an in-frame stop codon after aa 208.


ensembl_gene_id: FTT_1179
symbol: bipA
gene_biotype: protein_coding
description:
  GTP binding translational elongation factor Tu and G family protein; Similar to Q9KNJ4 GTP-binding protein TypA from Vibrio cholerae (609 aa). FASTA: opt: 2972 Z-score: 3319.9 E(): 5e-177 Smith-Waterman score: 2972; 73.045identity in 601 aa overlap.


ensembl_gene_id: FTT_1181c
symbol: ggt
gene_biotype: protein_coding
description:
  Similar to Q8EXW1 Conserved hypothetical protein from Leptospira interrogans (250 aa). FASTA: opt: 528 Z-score: 655.2 E(): 1.3e-28 Smith-Waterman score: 528; 34.711 identity in 242 aa overlap. Contains an in-frame stop codon after aa 107 ORF ftt1180.


ensembl_gene_id: FTT_1183c
symbol: vacJ
gene_biotype: protein_coding
description:
  VacJ lipoprotein, pseudogene; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.


ensembl_gene_id: FTT_1184c
symbol: FTT_1184c
gene_biotype: protein_coding
description:
  Similar to Y369_VIBVU (Q8DF55) Hypothetical protein VV10369 from Vibrio vulnificus (117 aa). FASTA: opt: 238 Z-score: 320.2 E(): 6.1e-10 Smith-Waterman score: 238; 41.304 identity in 92 aa overlap. ORF ftt1184c; Belongs to the UPF0125 (RnfH) family.


ensembl_gene_id: FTT_1185c
symbol: FTT_1185c
gene_biotype: protein_coding
description:
  Similar to Q8ZH13 Hypothetical protein YPO1102 from Yersinia pestis (144 aa). FASTA: opt: 463 Z-score: 623.4 E(): 7.9e-27 Smith-Waterman score: 463; 43.662 39dentity in 142 aa overlap. ORF ftt1185c.


ensembl_gene_id: FTT_1186
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA (tmRNA)-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then swi [...]


ensembl_gene_id: FTT_1190c
symbol: xseA
gene_biotype: protein_coding
description:
  Major facilitator superfamily (MFS) transport protein, pseudogene; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: FTT_1191
symbol: FTT_1191
gene_biotype: protein_coding
description:
  Aminoacylase; Similar to Q8RFU4 N-acyl-L-amino acid amidohydrolase from Fusobacterium nucleatum (subsp. nucleatum) (393 aa). FASTA: opt: 945 Z-score: 1170.3 E(): 2.7e-57 Smith-Waterman score: 945; 38.259 identity in 379 aa overlap. ORF ftt1191.


ensembl_gene_id: FTT_1193c
symbol: FTT_1193c
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, pseudogene; Similar to Q9RSX6 Hypothetical protein DR1993 from Deinococcus radiodurans (274 aa). FASTA: opt: 488 Z-score: 621.6 E(): 9.8e-27 Smith-Waterman score: 488; 32.500 identity in 280 aa overlap. Contains a frameshfit after aa 295 ORF ftt1192c.


ensembl_gene_id: FTT_1194c
symbol: FTT_1194c
gene_biotype: protein_coding
description:
  Similar to Q884M8 Conserved hypothetical protein from Pseudomonas syringae (pv. tomato) (319 aa). FASTA: opt: 460 Z-score: 588.5 E(): 6.9e-25 Smith-Waterman score: 460; 30.435identity in 322 aa overlap. Putative pseudogene (upstream sequence matches homologs). ORF ftt1194c.


ensembl_gene_id: FTT_1196c
symbol: FTT_1196c
gene_biotype: protein_coding
description:
  Similar to Q88JG1 Conserved hypothetical protein from Pseudomonas putida (strain KT2440) (469 aa). FASTA: opt: 1631 Z-score: 1944.7 E(): 2e-100 Smith-Waterman score: 1631; 52.903 identity in 465 aa overlap. Contains a frameshift at aa 59. Frameshift occurs at a heptanucleotide sequence and so could be part of a programmed translational frameshift ORF ftt1195c.


ensembl_gene_id: FTT_1199c
symbol: uvrB
gene_biotype: protein_coding
description:
  DNA excision repair enzyme, subunit B (UvrABC system protein B); The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion i [...]


ensembl_gene_id: FTT_1200c
symbol: sbcB
gene_biotype: protein_coding
description:
  Similar to Q83BX4 Exodeoxyribonuclease I,putative from Coxiella burnetii (458 aa). FASTA: opt: 677 Z-score: 797.9 E(): 1.5e-36 Smith-Waterman score: 1190; 39.875 identity in 479 aa overlap.


ensembl_gene_id: FTT_1201c
symbol: FTT_1201c
gene_biotype: protein_coding
description:
  Similar to Q9KKP5 Oxidoreductase,short-chain dehydrogenase/reductase family from Vibrio cholerae (239 aa). FASTA: opt: 1097 Z-score: 1344.5 E(): 5.4e-67 Smith-Waterman score: 1097; 72.458identity in 236 aa overlap. ORF ftt1201c; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: FTT_1202
symbol: FTT_1202
gene_biotype: protein_coding
description:
  Similar to Q9KKP4 Transcriptional regulator, LysR family from Vibrio cholerae (301 aa). FASTA: opt: 661 Z-score: 794.3 E(): 2.4e-36 Smith-Waterman score: 661; 36.120identity in 299 aa overlap. ORF ftt1202; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: FTT_1205
symbol: gidA
gene_biotype: protein_coding
description:
  Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: FTT_1208
symbol: rpiA
gene_biotype: protein_coding
description:
  Ribose 5-phospate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.


ensembl_gene_id: FTT_1211c
symbol: FTT_1211c
gene_biotype: protein_coding
description:
  Hypothetical protein; CDS is disrupted by the insertion of an ISFtu1 element occurring very near the C-terminal end. It is not clear whether this insertion affects the function of the protein ORF ftt1211c.


ensembl_gene_id: FTT_1212c
symbol: gloA
gene_biotype: protein_coding
description:
  Lactoylglutathione lyase; Similar to LGUL_VIBPA (P46235) Probable lactoylglutathione lyase from Vibrio parahaemolyticus (138 aa). FASTA: opt: 549 Z-score: 759.1 E(): 2.2e-34 Smith-Waterman score: 549; 64.516 identity in 124 aa overlap.


ensembl_gene_id: FTT_1213
symbol: FTT_1213
gene_biotype: protein_coding
description:
  YhhQ family protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: FTT_1214c
symbol: FTT_1214c
gene_biotype: protein_coding
description:
  Haloacid dehalogenase-like hydrolase family protein; Similar to Q8XN14 Hypothetical protein CPE0524 from Clostridium perfringens (264 aa). FASTA: opt: 486 Z-score: 584.5 E(): 1.1e-24 Smith-Waterman score: 486; 31.939 identity in 263 aa overlap. ORF ftt1214c.


ensembl_gene_id: FTT_1215c
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: FTT_1217c
symbol: visC
gene_biotype: protein_coding
description:
  Monooxygenase family protein; Similar to Q83F72 VisC protein from Coxiella burnetii (411 aa). FASTA: opt: 645 Z-score: 778.5 E(): 1.8e-35 Smith-Waterman score: 858; 37.192 identity in 406 aa overlap.


ensembl_gene_id: FTT_1218c
symbol: ubiH
gene_biotype: protein_coding
description:
  Similar to Q87UH4 2-octaprenyl-6-methoxyphenyl hydroxylase from Pseudomonas syringae (pv. tomato) (395 aa). FASTA: opt: 654 Z-score: 770.5 E(): 5e-35 Smith-Waterman score: 654; 32.143 identity in 392 aa overlap.


ensembl_gene_id: FTT_1219c
symbol: FTT_1219c
gene_biotype: protein_coding
description:
  Similar to YGA1_PSEPK (Q88CI0) Hypothetical UPF0149 protein PP5201 from Pseudomonas putida (strain KT2440) (184 aa). FASTA: opt: 269 Z-score: 349.3 E(): 1.4e-11 Smith-Waterman score: 269; 34.637identity in 179 aa overlap. ORF ftt1219c.


ensembl_gene_id: FTT_1220
symbol: FTT_1220
gene_biotype: protein_coding
description:
  5-formyltetrahydroformate cycloligase family protein; Similar to Q8ZM70 Putative ligase from Salmonella typhimurium (182 aa). FASTA: opt: 317 Z-score: 411.1 E(): 5.2e-15 Smith-Waterman score: 317; 32.727 identity in 165 aa overlap. ORF ftt1220; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.


ensembl_gene_id: FTT_1222
symbol: dedA2
gene_biotype: protein_coding
description:
  DedA family protein; Similar to Q89YU2 Conserved hypothetical protein,putative membrane protein from Bacteroides thetaiotaomicron (213 aa). FASTA: opt: 602 Z-score: 702.4 E(): 3.1e-31 Smith-Waterman score: 602; 42.857identity in 210 aa overlap.


ensembl_gene_id: FTT_1223
symbol: dedA1
gene_biotype: protein_coding
description:
  DedA family protein; Similar to Q8R8Y8 Hypothetical protein DedA2 from Thermoanaerobacter tengcongensis (209 aa). FAST: opt: 674 Z-score: 828.7 E(): 2.9e-38 Smith-Waterman score: 674; 45.894 identity in 207 aa overlap.


ensembl_gene_id: FTT_1226c
symbol: iscS
gene_biotype: protein_coding
description:
  Similar to ISCS_VIBCH (Q9KTY2) Cysteine desulfurase (EC 4.4.1.-) from Vibrio cholerae (404 aa). FASTA: opt: 1104 Z-score: 1336.0 E(): 1.6e-66 Smith-Waterman score: 1104; 45.812 identity in 382 aa overlap.


ensembl_gene_id: FTT_1227
symbol: rne
gene_biotype: protein_coding
description:
  Ribonuclease E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily.


ensembl_gene_id: FTT_1228
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: FTT_1229
symbol: thyA
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: FTT_1230
symbol: serA
gene_biotype: protein_coding
description:
  Similar to Q8EIH7 D-3-phosphoglycerate dehydrogenase from Shewanella oneidensis (409 aa). FASTA: opt: 1616 Z-score: 1931.0 E(): 1.1e-99 Smith-Waterman score: 1616; 59.756identity in 410 aa overlap; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: FTT_1231
symbol: mesJ
gene_biotype: protein_coding
description:
  PP-loop family protein; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: FTT_1233c
symbol: yjdL
gene_biotype: protein_coding
description:
  Proton-dependent oligopeptide transport (POT) family protein; Similar to YJDL_ECOLI (P39276) Hypothetical transporter yjdL from Escherichia coli (485 aa).FASTA: opt: 1064 Z-score: 1135.9 E(): 2.2e-55 Smith-Waterman score: 1064; 38.222 identity in 450 aa overlap.This CDS is disrupted by the insertion of an ISFtu1 element occurring very near the C-terminal end. It is not clear whether this insertion affects the function of the protein.


ensembl_gene_id: FTT_1234
symbol: FTT_1234
gene_biotype: protein_coding
description:
  Similar to Q8YIA2 Choloylglycine hydrolase (EC 3.5.1.24) from Brucella melitensis (367 aa). FASTA: opt: 387 Z-score: 460.1 E(): 9.7e-18 Smith-Waterman score: 574; 34.718 identity in 337 aa overlap. ORF ftt1234.


ensembl_gene_id: FTT_1235c
symbol: lpcC
gene_biotype: protein_coding
description:
  Glycosyl transferases group 1 family protein; Similar to Q8FZH8 Lipopolysaccharide core biosynthesis mannosyltransferase LpcC from Brucella suis (354 aa). FASTA: opt: 825 Z-score: 1005.6 E(): 4e-48 Smith-Waterman score: 825; 38.352 identity in 352 aa overlap.


ensembl_gene_id: FTT_1237
symbol: FTT_1237
gene_biotype: protein_coding
description:
  Glycosyl transferase family 8 protein; Similar to Q8A3T1 Putative stress protein from Bacteroides thetaiotaomicron (309 aa). FASTA: opt: 308 Z-score: 375.2 E(): 5.2e-13 Smith-Waterman score: 348; 26.599 identity in 297 aa overlap. ORF ftt1237.


ensembl_gene_id: FTT_1240c
symbol: FTT_1240c
gene_biotype: protein_coding
description:
  Similar to YJGA_HAEIN (P45076) Hypothetical protein HI1151 from Haemophilus influenzae (178 aa). FASTA: opt: 359 Z-score: 390.6 E(): 7.3e-14 Smith-Waterman score: 359; 35.928 identity in 167 aa overlap. ORF ftt1240c; Belongs to the UPF0307 family.


ensembl_gene_id: FTT_1241
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: FTT_1243c
symbol: mreA
gene_biotype: protein_coding
description:
  FAD binding family protein; Similar to EAA32028 Hypothetical protein from Neurospora crassa (567 aa). FASTA: opt: 643 Z-score: 759.7 E(): 2e-34 Smith-Waterman score: 793; 29.879 identity in 579 aa overlap.


ensembl_gene_id: FTT_1245
symbol: rluD
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: FTT_1246
symbol: FTT_1246
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to Q8EEM6 Bax protein, putative from Shewanella oneidensis (255 aa). FASTA: opt: 369 Z-score: 448.5 E(): 4.3e-17 Smith-Waterman score: 369; 31.081 identity in 222 aa overlap. ORF ftt1246.


ensembl_gene_id: FTT_1247
symbol: FTT_1247
gene_biotype: protein_coding
description:
  Similar to Q9A5X9 ABC transporter,permease protein, putative from Caulobacter crescentus.(371 aa). FASTA: opt: 755 Z-score: 860.3 E(): 5e-40 Smith-Waterman score: 755; 36.095 identity in 338 aa overlap. ORF ftt1247.


ensembl_gene_id: FTT_1248
symbol: FTT_1248
gene_biotype: protein_coding
description:
  Similar to Q83DK2 ABC transporter,ATP-binding protein from Coxiella burnetii (268 aa). FASTA: opt: 674 Z-score: 783.9 E(): 9e-36 Smith-Waterman score: 674; 46.188 identity in 223 aa overlap. ORF ftt1248.


ensembl_gene_id: FTT_1249
symbol: FTT_1249
gene_biotype: protein_coding
description:
  Mycobacterial cell entry (mce) related family protein; Similar to Q9HZ27 Hypothetical protein PA3213 from Pseudomonas aeruginosa (312 aa). FASTA: opt: 282 Z-score: 315.9 E(): 1.1e-09 Smith-Waterman score: 282; 23.661 identity in 224 aa overlap. The archetype (Rv0169) for mce related family proteins, was isolated as being necessary for colonization of, and survival within, the macrophage MEDLINE:93377076. ORF ftt1249.


ensembl_gene_id: FTT_1251c
symbol: FTT_1251c
gene_biotype: protein_coding
description:
  Similar to Q8EDF8 Conserved hypothetical protein from Shewanella oneidensis (234 aa). FASTA: opt: 692 Z-score: 805.5 E(): 5.6e-37 Smith-Waterman score: 692; 44.828 identity in 232 aa overlap. ORF ftt1251c.


ensembl_gene_id: FTT_1252
symbol: FTT_1252
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: FTT_1253
symbol: FTT_1253
gene_biotype: protein_coding
description:
  Proton-dependent oligopeptide transport (POT) family protein; Similar to Q9KTB5 Proton/peptide symporter family protein from Vibrio cholerae (514 aa). FASTA: opt: 1234 Z-score: 1376.6 E(): 8.7e-69 Smith-Waterman score: 1245; 42.050identity in 478 aa overlap. ORF ftt1253.


ensembl_gene_id: FTT_1254
symbol: fadD1
gene_biotype: protein_coding
description:
  Acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase); Similar to Q89UU0 Long-chain-fatty-acid-CoA ligase from Bradyrhizobium japonicum (561 aa). FASTA: opt: 1308 Z-score: 1621.3 E(): 2.1e-82 Smith-Waterman score: 1308; 38.324 identity in 561 aa overlap.


ensembl_gene_id: FTT_1255c
symbol: FTT_1255c
gene_biotype: protein_coding
description:
  Transcriptional regulator araC family protein; Similar to Q8PAT1 Transcriptional regulator from Xanthomonas campestris (pv. campestris) (287 aa). FASTA: opt: 689 Z-score: 866.5 E(): 2.3e-40 Smith-Waterman score: 689; 37.354identity in 257 aa overlap. ORF ftt1255c.


ensembl_gene_id: FTT_1256
symbol: emrB
gene_biotype: protein_coding
description:
  Major facilitator superfamily (MFS) transport protein; Similar to Q83DE1 Drug resistance transporter, EmrB/QacA family from Coxiella burnetii (526 aa). FASTA: opt: 1037 Z-score: 1145.4 E(): 6.6e-56 Smith-Waterman score: 1037; 31.928 identity in 498 aa overlap; Belongs to the major facilitator superfamily.


ensembl_gene_id: FTT_1257
symbol: emrA1
gene_biotype: protein_coding
description:
  HlyD family secretion protein; Similar to Q83DE0 Multidrug resistance protein from Coxiella burnetii (331 aa). FASTA: opt: 742 Z-score: 834.3 E(): 1.4e-38 Smith-Waterman score: 742; 37.695 identity in 321 aa overlap.


ensembl_gene_id: FTT_1258
symbol: FTT_1258
gene_biotype: protein_coding
description:
  Similar to Q93NK3 Putative outer membrane protein from Pseudomonas syringae (pv. syringae) (475 aa). FASTA: opt: 594 Z-score: 697.2 E(): 6e-31 Smith-Waterman score: 594; 28.970 identity in 466 aa overlap. ORF ftt1258.


ensembl_gene_id: FTT_1259
symbol: nadE
gene_biotype: protein_coding
description:
  NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.


ensembl_gene_id: FTT_1266c
symbol: yhhW
gene_biotype: protein_coding
description:
  Pirin family protein; Similar to YC10_PSEAE (Q9I4C8) Hypothetical protein PA1210 from Pseudomonas aeruginosa (232 aa). FASTA: opt: 602 Z-score: 765.5 E(): 9.5e-35 Smith-Waterman score: 602; 41.667 identity in 228 aa overlap. This CDS is disrupted by the insertion of an ISFtu1 element occurring very near the C-terminal end. It is not clear whether this insertion affects the function of the protein; Belongs to the pirin family.


ensembl_gene_id: FTT_1267
symbol: FTT_1267
gene_biotype: protein_coding
description:
  Similar to Q8E7Z8 Transcriptional regulator, LysR family from Shewanella oneidensis (289 aa). FASTA: opt: 561 Z-score: 683.5 E(): 3.5e-30 Smith-Waterman score: 561; 32.423identity in 293 aa overlap. ORF ftt1267; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: FTT_1268c
symbol: dnaJ1
gene_biotype: protein_coding
description:
  Chaperone protein dnaJ (heat shock protein 70 family cofactor); Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of AT [...]


ensembl_gene_id: FTT_1269c
symbol: dnaK
gene_biotype: protein_coding
description:
  Chaperone protein dnaK (heat shock protein family 70 protein); Acts as a chaperone; Belongs to the heat shock protein 70 family.


ensembl_gene_id: FTT_1270c
symbol: grpE
gene_biotype: protein_coding
description:
  Chaperone protein grpE (heat shock protein family 70 cofactor); Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the [...]


ensembl_gene_id: FTT_1271
symbol: mltA
gene_biotype: protein_coding
description:
  Membrane-bound lytic murein transglycosylase A (MLT) family protein; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division.


ensembl_gene_id: FTT_1272
symbol: FTT_1272
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to Q8KB91 Protoporphyrinogen oxidase, putative from Chlorobium tepidum (399 aa). FASTA: opt: 594 Z-score: 698.0 E(): 5.5e-31 Smith-Waterman score: 673; 31.552 identity in 393 aa overlap. ORF ftt1272.


ensembl_gene_id: FTT_1273
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal subunit protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: FTT_1274
symbol: rpsI
gene_biotype: protein_coding
description:
  Similar to RS9_XYLFT (Q87DD4) 30S ribosomal protein S9 from Xylella fastidiosa (strain Temecula1 / ATCC 700964) (130 aa). FASTA: opt: 587 Z-score: 765.1 E(): 1e-34 Smith-Waterman score: 587; 69.600identity in 125 aa overlap; Belongs to the universal ribosomal protein uS9 family.


ensembl_gene_id: FTT_1275
symbol: mglA
gene_biotype: protein_coding
description:
  Similar to O52734 Macrophage growth locus A from Francisella novicida strain U112 (205 aa). FASTA: opt: 1275 Z-score: 1587.7 E(): 1.5e-80 Smith-Waterman score: 1275; 99.512 identity in 205 aa overlap (1-205:1-205).


ensembl_gene_id: FTT_1277c
symbol: FTT_1277c
gene_biotype: protein_coding
description:
  Similar to Q88EE1 Sodium-solute symporter, putative from Pseudomonas putida (strain KT2440) (459 aa). FASTA: opt: 279 Z-score: 311.8 E(): 1.8e-09 Smith-Waterman score: 300; 20.863identity in 417 aa overlap. ORF ftt1277c; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: FTT_1278c
symbol: rnhB
gene_biotype: protein_coding
description:
  Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.


ensembl_gene_id: FTT_1279c
symbol: yfhQ
gene_biotype: protein_coding
description:
  SpoU rRNA methylase family protein; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.


ensembl_gene_id: FTT_1280c
symbol: ptsN
gene_biotype: protein_coding
description:
  PEP-dependent sugar phosphotransferase system (PTS) family protein; Similar to Q88PA0 Phosphotransferase system, nitrogen regulatory IIA protein from Pseudomonas putida (strain KT2440) (154 aa). FASTA: opt: 239 Z-score: 318.2 E(): 7.8e-10 Smith-Waterman score: 239; 26.316identity in 152 aa overlap.


ensembl_gene_id: FTT_1281c
symbol: yhbH
gene_biotype: protein_coding
description:
  Sigma-54 modulation protein; Similar to RP5M_PSEPK (P15592) Probable sigma(54) modulation protein from Pseudomonas putida (102 aa). FASTA: opt: 336 Z-score: 439.6 E(): 1.4e-16 Smith-Waterman score: 336; 54.839 identity in 93 aa overlap.


ensembl_gene_id: FTT_1283
symbol: trmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase trmE family protein; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: FTT_1285c
symbol: FTT_1285c
gene_biotype: protein_coding
description:
  LysR transcriptional regulator family protein; Similar to Q8D448 Transcriptional regulator from Vibrio vulnificus (303 aa). FASTA: opt: 372 Z-score: 436.1 E(): 2.1e-16 Smith-Waterman score: 372; 28.571 identity in 294 aa overlap. ORF ftt1285c; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: FTT_1287
symbol: cbs
gene_biotype: protein_coding
description:
  Similar to Q8A8A8 Choloylglycine hydrolase from Bacteroides thetaiotaomicron (326 aa). FASTA: opt: 588 Z-score: 716.9 E(): 4.8e-32 Smith-Waterman score: 588; 34.700 identity in 317 aa overlap. Contains an in-frame stop codon at aa 258 ORF ftt1286.


ensembl_gene_id: FTT_1288
symbol: FTT_1288
gene_biotype: protein_coding
description:
  Similar to Q8Z651 Putative membrane protein from Salmonella typhi (204 aa). FASTA: opt: 462 Z-score: 553.9 E(): 5.9e-23 Smith-Waterman score: 462; 36.667 identity in 180 aa overlap. ORF ftt1288.


ensembl_gene_id: FTT_1290
symbol: metG
gene_biotype: protein_coding
description:
  tRNA-Ser; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: FTT_1291
symbol: FTT_1291
gene_biotype: protein_coding
description:
  Major facilitator superfamily (MFS) transport protein; Similar to EXUT_BACSU (O34456) Hexuronate transporter from Bacillus subtilis (422 aa). FASTA: opt: 655 Z-score: 716.7 E(): 5e-32 Smith-Waterman score: 659; 28.250 identity in 400 aa overlap. ORF ftt1291.


ensembl_gene_id: FTT_1292c
symbol: FTT_1292c
gene_biotype: protein_coding
description:
  Similar to Q88YM1 Hypothetical protein from Lactobacillus plantarum (215 aa). FASTA: opt: 420 Z-score: 532.1 E(): 9.5e-22 Smith-Waterman score: 420; 35.025 identity in 197 aa overlap. ORF ftt1292c.


ensembl_gene_id: FTT_1293c
symbol: FTT_1293c
gene_biotype: protein_coding
description:
  Sua5_yciO_yrdC family protein; Similar to Q9KSS8 Hypothetical protein VC1178 from Vibrio cholerae (206 aa). FASTA: opt: 558 Z-score: 715.6 E(): 5.8e-32 Smith-Waterman score: 558; 42.703 identity in 185 aa overlap. ORF ftt1293c; Belongs to the SUA5 family.


ensembl_gene_id: FTT_1294
symbol: ispZ
gene_biotype: protein_coding
description:
  Intracellular septation protein A family protein; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.


ensembl_gene_id: FTT_1295c
symbol: glk1
gene_biotype: protein_coding
description:
  Glucose kinase; Similar to GLK_ANASP (P58616) Glucokinase from Anabaena sp. (strain PCC 7120) (342 aa). FASTA: opt: 735 Z-score: 904.6 E(): 1.7e-42 Smith-Waterman score: 735; 36.735 identity in 343 aa overlap; Belongs to the bacterial glucokinase family.


ensembl_gene_id: FTT_1296
symbol: ubiE
gene_biotype: protein_coding
description:
  Menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).


ensembl_gene_id: FTT_1298
symbol: ubiB
gene_biotype: protein_coding
description:
  2-polyprenylphenol 6-hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily.


ensembl_gene_id: FTT_1299
symbol: hitA
gene_biotype: protein_coding
description:
  Similar to Q82WM8 HIT (Histidine triad) family from Nitrosomonas europaea (116 aa). FASTA: opt: 424 Z-score: 574.5 E(): 4.1e-24 Smith-Waterman score: 424; 53.571 identity in 112 aa overlap.


ensembl_gene_id: FTT_1302
symbol: FTT_1302
gene_biotype: protein_coding
description:
  Purine/pyrimidine phosphoribosyl transferase family protein, pseudogene; Similar to Q8A404 Putative amidophosphoribosyl-transferase from Bacteroides thetaiotaomicron (235 aa). FASTA: opt: 247 Z-score: 317.1 E(): 9e-10 Smith-Waterman score: 247; 26.699identity in 206 aa overlap. Contains a frameshift after aa 121 ORF ftt1301c.


ensembl_gene_id: FTT_1305c
symbol: murA
gene_biotype: protein_coding
description:
  Similar to Q814X9 UDP-N-acetylglucosamine 1-carboxyvinyltransferase from Bacillus cereus (strain ATCC 14579 / DSM 31) (434 aa). FASTA: opt: 697 Z-score: 859.3 E(): 5.6e-40 Smith-Waterman score: 765; 33.333 identity in 438 aa overlap.


ensembl_gene_id: FTT_1306c
symbol: engA
gene_biotype: protein_coding
description:
  GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: FTT_1310c
symbol: hflB
gene_biotype: protein_coding
description:
  Transposase; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: FTT_1311
symbol: yieO
gene_biotype: protein_coding
description:
  Major facilitator superfamily (MFS) transport protein; Similar to Q8UHQ9 MFS permease from Agrobacterium tumefaciens (strain C58 / ATCC 33970) (475 aa). FASTA: opt: 757 Z-score: 760.1 E(): 1.9e-34 Smith-Waterman score: 766; 32.735 identity in 446 aa overlap.


ensembl_gene_id: FTT_1312c
symbol: uvrA
gene_biotype: protein_coding
description:
  UvrABC system protein A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: FTT_1313c
symbol: greA
gene_biotype: protein_coding
description:
  Transcriptional elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: FTT_1314c
symbol: FTT_1314c
gene_biotype: protein_coding
description:
  Type IV pili fiber building block protein; Similar to Q8EBJ4 Type IV pilus biogenesis protein (164 aa). FASTA: opt: 157 Z-score: 204.8 E(): 0.0016 Smith-Waterman score: 157; 27.607 identity in 163 aa overlap. The pili fiber building block protein has a highly distinct primary structure; a short positively charged leader sequence, and a highly conserved and highly hydrophobic amino-terminal domain which forms the core of the pilus fiber; A variety of studies suggest that the invariant glycine (G) at -1 is required for prepilin cleavage and assembly and that the glutamate (E) at + 5 is e [...]


ensembl_gene_id: FTT_1315c
symbol: pgi
gene_biotype: protein_coding
description:
  Similar to G6PI_VIBVU (Q8DCK7) Glucose-6-phosphate isomerase from Vibrio vulnificus (550 aa). FASTA: opt: 1832 Z-score: 2179.9 E(): 1.6e-113 Smith-Waterman score: 1832; 51.220 identity in 533 aa overlap.


ensembl_gene_id: FTT_1316c
symbol: FTT_1316c
gene_biotype: protein_coding
description:
  Similar to Q8R9T9 Thiamine pyrophosphokinase from Thermoanaerobacter tengcongensis (211 aa). FASTA: opt: 221 Z-score: 278.6 E(): 1.3e-07 Smith-Waterman score: 238; 25.943 identity in 212 aa overlap. ORF ftt1316c.


ensembl_gene_id: FTT_1317c
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: FTT_1318c
symbol: pepA
gene_biotype: protein_coding
description:
  Cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: FTT_1319
symbol: lptF
gene_biotype: protein_coding
description:
  Permease YjgP/YjgQ family protein; Similar to Q8EH61 Conserved hypothetical protein from Shewanella oneidensis (370 aa). FASTA: opt: 370 Z-score: 433.4 E(): 3e-16 Smith-Waterman score: 370; 21.508 identity in 358 aa overlap. ORF ftt1319.


ensembl_gene_id: FTT_1320
symbol: lptG
gene_biotype: protein_coding
description:
  Permease YjgP/YjgQ family protein; Similar to Q8ZK26 Putative permease from Salmonella typhimurium (360 aa). FASTA: opt: 510 Z-score: 585.0 E(): 1.1e-24 Smith-Waterman score: 511; 27.147 identity in 361 aa overlap. ORF ftt1320.


ensembl_gene_id: FTT_1321
symbol: FTT_1321
gene_biotype: protein_coding
description:
  Similar to Q83AI4 Peptidase, M16 family from Coxiella burnetii (459 aa). FASTA: opt: 868 Z-score: 1053.1 E(): 9.1e-51 Smith-Waterman score: 868; 34.158 identity in 404 aa overlap. ORF ftt1321.


ensembl_gene_id: FTT_1322
symbol: FTT_1322
gene_biotype: protein_coding
description:
  Similar to Q83AI5 Peptidase, M16 family from Coxiella burnetii (443 aa). FASTA: opt: 605 Z-score: 727.1 E(): 1.3e-32 Smith-Waterman score: 605; 28.607 identity in 402 aa overlap. ORF ftt1322.


ensembl_gene_id: FTT_1323
symbol: rsmD
gene_biotype: protein_coding
description:
  Methylase; Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle; Belongs to the methyltransferase superfamily. RsmD family.


ensembl_gene_id: FTT_1324
symbol: FTT_1324
gene_biotype: protein_coding
description:
  Similar to Q9CM99 Hypothetical protein PM0935 from Pasteurella multocida (226 aa). FASTA: opt: 523 Z-score: 599.4 E(): 1.7e-25 Smith-Waterman score: 523; 39.151 identity in 212 aa overlap. ORF ftt1324.


ensembl_gene_id: FTT_1325c
symbol: miaE
gene_biotype: protein_coding
description:
  Similar to Q88KV1 TRNA-(ms(2)io(6)a)-hydroxylase, putative from Pseudomonas putida (strain KT2440)(205 aa). FASTA: opt: 660 Z-score: 867.5 E(): 2e-40 Smith-Waterman score: 660; 50.777 identity in 193 aa overlap.


ensembl_gene_id: FTT_1326
symbol: udp
gene_biotype: protein_coding
description:
  Uridine phosphorylase; Similar to Q9CKN8 Udp from Pasteurella multocida (252 aa). FASTA: opt: 817 Z-score: 1065.9 E(): 1.8e-51 Smith-Waterman score: 817; 48.760 identity in 242 aa overlap.


ensembl_gene_id: FTT_1327
symbol: cdd
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: FTT_1328c
symbol: FTT_1328c
gene_biotype: protein_coding
description:
  FAD-binding family protein; Similar to Q8EDV0 Oxidoreductase,FAD-binding, putative from Shewanella oneidensis (1013 aa).


ensembl_gene_id: FTT_1329
symbol: gpmI
gene_biotype: protein_coding
description:
  2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: FTT_1330
symbol: serS
gene_biotype: protein_coding
description:
  Seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: FTT_1331
symbol: cscK
gene_biotype: protein_coding
description:
  Fructokinase; Similar to Q97IW7 Fructokinase from Clostridium acetobutylicum (288 aa). FASTA: opt: 932 Z-score: 1175.6 E(): 1.4e-57 Smith-Waterman score: 932; 47.603identity in 292 aa overlap.


ensembl_gene_id: FTT_1332
symbol: FTT_1332
gene_biotype: protein_coding
description:
  Polysaccharide biosynthesis protein (export protein); Similar to Q9X4C7 Repeat unit exporter from Escherichia coli (419 aa). FASTA: opt: 324 Z-score: 369.2 E(): 1.1e-12 Smith-Waterman score: 324; 22.604 identity in 407 aa overlap. ORF ftt1332.


ensembl_gene_id: FTT_1335
symbol: cydD
gene_biotype: protein_coding
description:
  ABC transporter, ATP-binding and membrane protein; Similar to Q8ZGD0 Transport ATP-binding protein from Yersinia pestis (594 aa). FASTA: opt: 1436 Z-score: 1517.3 E(): 1.3e-76 Smith-Waterman score: 1436; 39.726 identity in 584 aa overlap.


ensembl_gene_id: FTT_1336
symbol: cydC
gene_biotype: protein_coding
description:
  ABC transporter, ATP-binding and membrane protein; Similar to Q87QA1 Transport ATP-binding protein from Vibrio parahaemolyticus (573 aa). FASTA: opt: 1340 Z-score: 1372.8 E(): 1.4e-68 Smith-Waterman score: 1340; 40.037 identity in 547 aa overlap.


ensembl_gene_id: FTT_1337c
symbol: dctA
gene_biotype: protein_coding
description:
  Similar to DTA2_PSEAE (Q9I4F5) C4-dicarboxylate transport protein from Pseudomonas aeruginosa (436 aa). FASTA: opt: 1534 Z-score: 1703.1 E(): 5.7e-87 Smith-Waterman score: 1534; 55.206identity in 413 aa overlap; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: FTT_1338c
symbol: FTT_1338c
gene_biotype: protein_coding
description:
  Similar to Q99WA6 SA0455 protein (Translation initiation inhibitor homologue) from Staphylococcus aureus (126 aa). FASTA: 452 opt: 452 Z-score: 597.7 E(): 2.1e-25 Smith-Waterman score: 452; 61.017 identity in 118 aa overlap. ORF ftt1338c.


ensembl_gene_id: FTT_1339c
symbol: FTT_1339c
gene_biotype: protein_coding
description:
  Similar to Q87N13 Sulfate permease family protein from Vibrio parahaemolyticus (519 aa). FASTA: opt: 1333 Z-score: 1472.3 E(): 4.1e-74 Smith-Waterman score: 1602; 47.398 identity in 538 aa overlap. ORF ftt1339c.


ensembl_gene_id: FTT_1341
symbol: FTT_1341
gene_biotype: protein_coding
description:
  Membrane protein; Similiar to CAD85637 (Q82TY8) Putative integral membrane transmembrane protein from Nitrosomonas europaea (221 aa). FASTA: 670 Z-score: 817.1 E(): 1.2e-37 50.226identity in 221 aa overlap ORF ftt1341.


ensembl_gene_id: FTT_1342
symbol: FTT_1342
gene_biotype: protein_coding
description:
  Conserved hypothetical membrane protein; Similar to Q08861 Gamma-aminobutyric acid-grated chloride- ion channel/receptor, zeta subunit, precusor from Lymnaea stagnalis (437 aa). FASTA: opt: 357 Z-score: 407.4 E(): 7.7e-15 Smith-Waterman score: 360; 23.510 identity in 302 aa overlap ORF ftt1342.


ensembl_gene_id: FTT_1344
symbol: pdpA1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to AAP58968.1 (Q7X3I9) PdpA from Francisella novicida (820 aa). BLAST Score = 1545 bits (4000), Expect = 0.0 Identities = 777/820 (94), Positives = 787/820 (95) Identical to FTT1699. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625.


ensembl_gene_id: FTT_1345
symbol: pdpB1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to AAP58967.1 (Q7X3J0) PdpB from Francisella novicida (1093 aa). BLAST Score = 1914 bits (4959), Expect = 0.0 Identities = 975/1093 (89),Positives = 988/1093 (90) Identical to FTT1700. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625.


ensembl_gene_id: FTT_1346
symbol: FTT_1346
gene_biotype: protein_coding
description:
  Hypothetical protein; Identical to FTT1701. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625 ORF ftt1346.


ensembl_gene_id: FTT_1347
symbol: FTT_1347
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to AAP58969.1 (Q7XI38) unknown protein from Francisella novicida (164 aa). BLAST Score = 305 bits (780), Expect = 2e-82 Identities = 163/164 (99),Positives = 163/164 (99) Identical to FTT1702. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625 ORF ftt1347.


ensembl_gene_id: FTT_1348
symbol: FTT_1348
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; 1-213 aa similar to AAP58970.1 (Q7X3I7) unknown Francisella novicida (212 aa). BLAST Score 352, Expect = 1e-95 Identities = 177/209 (84), Positives = 189/209 (90). 330-580aa similar to AAP58971.1 (Q7X3I6) unknown protein from Francisella tularensis subsp. novicida (251 aa). BLAST Score = 483 bits (1244), Expect = e-135 Identities = 243/251 (96), Positives = 249/251 (99). Identical to FTT1703. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625. Protein fusion product of two hypothetical proteins in F. novicida. ORF [...]


ensembl_gene_id: FTT_1349
symbol: FTT_1349
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to AAP58972.1 (Q7X3I5) unknown protein from Francisella novicida (173 aa). BLAST Score = 336, Expect = 1e-91 Identities = 170/173 (98), Positives = 171/173 (98) Identical to FTT1704. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625 ORF ftt1349.


ensembl_gene_id: FTT_1350
symbol: FTT_1350
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to AAP58973.1 (Q7X3I4) unknown protein from Francisella novicida (476 aa). BLAST Score = 864 bits (2233), Expect = 0.0 Identities = 433/476 (90),Positives = 437/476 (91) Identical to FTT1705. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625 ORF ftt1350.


ensembl_gene_id: FTT_1351
symbol: FTT_1351
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to AAP58974.1 (Q7X3I3) unknown protein from Francisella novicida (207 aa). BLAST Score = 391 bits (1005), Expect = e-108 Identities = 194/207 (93),Positives = 195/207 (94) Identical to FTT1706. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625 ORF ftt1351.


ensembl_gene_id: FTT_1352
symbol: FTT_1352
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to AAP58975.1 (Q7X3I2) unknown protein from Francisella novicida (262 aa), BLAST Score = 443 bits (1140), Expect = e-12 Identities = 229/262 (87),Positives = 235/262 (89) This protein is identical to FTT1707. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625 ORF ftt1352.


ensembl_gene_id: FTT_1353
symbol: FTT_1353
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to AAP58976.1 (Q7X3I1) unknown protein from Francisella novicida (257 aa). BLAST Score = 412, Expect = e-114 Identities = 213/257 (82), Positives = 213/257 (82) Identical to FTT1708. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625. ORF ftt1353.


ensembl_gene_id: FTT_1354
symbol: pdpC1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to AAP58966.1 PdpC from Francisella novicida (1218 aa). BLAST Score = 2172, Expect = 0.0 Identities = 1089/1220 (89), Positives = 1120/1220 (91),Gaps = 3/1220 (0) Identical to FTT1709. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625.


ensembl_gene_id: FTT_1355
symbol: FTT_1355
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to AAP58977.1 (Q7X3I0) unknown protein from Francisella novicida (188 aa). BLAST Score = 321, Expect = 3e-87 Identities = 156/174 (89), Positives = 162/174 (93) Identical to FTT1710. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625 ORF ftt1355.


ensembl_gene_id: FTT_1356c
symbol: iglD1
gene_biotype: protein_coding
description:
  Intracellular growth locus, subunit D; Similar to AAP58965.1 (Q7C3J6) IglD from Francisella novicida (398 aa). BLAST Score = 746, Expect = 0.0 Identities = 382/398 (95), Positives = 383/398 (96) Identical to FTT1711. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625.


ensembl_gene_id: FTT_1357c
symbol: iglC1
gene_biotype: protein_coding
description:
  Intracellular growth locus, subunit C; Similar to AAP58964.1 (Q7X3J5) IglC (23 kDa protein) from Francisella novicida (211 aa). BLAST Score = 405, Expect = e-112 Identities = 209/211 (99), Positives = 210/211 (99) Identical to FTT1712. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625.


ensembl_gene_id: FTT_1358c
symbol: iglB1
gene_biotype: protein_coding
description:
  Intracellular growth locus, subunit B; Similar to AAP58963.1 (Q7X3J4) IglB from Francisella novicida (514 aa). BLAST Score = 997, Expect = 0.0 Identities = 496/514 (96), Positives = 499/514 (97) Identical to FTT1713. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625.


ensembl_gene_id: FTT_1359c
symbol: iglA1
gene_biotype: protein_coding
description:
  Intracellular growth locus, subunit A; Similar to AAP58962.1 (Q7X3J5) IglA from Francisella novicida (184 aa). BLAST Score = 350, Expect = 6e-96 Identities = 181/184 (98), Positives = 181/184 (98) Identical to FTT1714. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625.


ensembl_gene_id: FTT_1360c
symbol: pdpD1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to AAP58961.1 (Q7C3J6) PdpD from Francisella novicida (1245 aa). BLAST Score = 2194, Expect = 0.0 Identities = 1133/1245 (91), Positives = 1154/1245 (92), Gaps = 50/1245 (4) Identical to FTT1715. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625.


ensembl_gene_id: FTT_1363c
symbol: isftu1-32
gene_biotype: protein_coding
description:
  Major facilitator superfamily (MFS) transport protein, pseudogene; ISFtu1 12bp terminal inverted repeat.


ensembl_gene_id: FTT_1365c
symbol: fbaB
gene_biotype: protein_coding
description:
  Trehalase, pseuodgene; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.


ensembl_gene_id: FTT_1366c
symbol: pyk
gene_biotype: protein_coding
description:
  Pyruvate kinase; Similar to AAO91275 (Q83AU7) Pyruvate kinase from Coxiella burnetii (477 aa). FASTA: opt: 1622 Z-score: 1687.6 E(): 3.8e-86 Smith-Waterman score: 1622; 53.249identity in 477 aa overlap domain, score 55.8, E-value 8.1e-14.


ensembl_gene_id: FTT_1367c
symbol: pgk
gene_biotype: protein_coding
description:
  Phosphogylcerate kinase; Similar to AAP18215 (PGK_ECOLI) Phosphoglycerate kinase from E. coli (387 aa). FASTA: opt: 1560 Z-score: 1688.5 E(): 3.4e-86 Smith-Waterman score: 1560; 63.077 identity in 390 aa overlap.


ensembl_gene_id: FTT_1368c
symbol: gapA
gene_biotype: protein_coding
description:
  Similar to Q8XKT9 Glyceraldehyde-3-phosphate dehydrogenase from Clostridium perfringens (332 aa). FASTA: opt: 1511 Z-score: 1671.9 E(): 2.8e-85 Smith-Waterman score: 1511; 71.341identity in 328 aa overlap.


ensembl_gene_id: FTT_1369c
symbol: tktA
gene_biotype: protein_coding
description:
  Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.


ensembl_gene_id: FTT_1370
symbol: FTT_1370
gene_biotype: protein_coding
description:
  Similar to AAN42711 (Q83LI4) Orf, conserved hypothetical protein from Shigella flexneri (173 aa). FASTA: opt: 194 Z-score: 254.2 E(): 2.6e-06 Smith-Waterman score: 194; 26.708 identity in 161 aa overlap ORF ftt1370.


ensembl_gene_id: FTT_1371
symbol: rmpF
gene_biotype: protein_coding
description:
  Similar to Q9HZN4 50S ribosomal protein L32 from Pseudomonas aeruginosa (59 aa). FASTA: opt: 286 Z-score: 446.7 E(): 4.9e-17 Smith-Waterman score: 286; 71.186 identity in 59 aa overlap; Belongs to the bacterial ribosomal protein bL32 family.


ensembl_gene_id: FTT_1372
symbol: plsX
gene_biotype: protein_coding
description:
  Fatty acid/phospholipid synthesis protein lsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: FTT_1373
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl carrier protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: FTT_1374
symbol: fabD
gene_biotype: protein_coding
description:
  Malonyl coA-acyl carrier protein transacylase; Similar to Q9CJS7 FabD from Pasteurella multocida (312 aa). FASTA: opt: 984 Z-score: 1099.0 E(): 2.3e-53 Smith-Waterman score: 984;50.163 identity in 307 aa overlap ORF ftt1374.


ensembl_gene_id: FTT_1375
symbol: fabG
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: FTT_1377
symbol: fabF
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: FTT_1382
symbol: suhB
gene_biotype: protein_coding
description:
  Conserved hypothetical membrane protein,pseudogene; Similar to AAP17579 (P33019) Hypothetical protein yeiH from E. coli (349 aa). FASTA: opt: 1005 Z-score: 1126.5 E(): 6.8e-55 Smith-Waterman score: 1005; 49.292 identity in 353 aa overlap. Contains an in-frame stop codon after aa 244 ORF ftt1381; Belongs to the inositol monophosphatase superfamily.


ensembl_gene_id: FTT_1384c
symbol: FTT_1384c
gene_biotype: protein_coding
description:
  Acetyltransferase; Similar to Q8D9X5 Probable acetyltransferase from Vibrio vulnificus (141 aa). FASTA: opt: 183 Z-score: 242.0 E(): 1.3e-05 Smith-Waterman score: 183; 27.132 identity in 129 aa overlap ORF ftt1384c.


ensembl_gene_id: FTT_1385c
symbol: rlmH
gene_biotype: protein_coding
description:
  Hypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: FTT_1387c
symbol: ligN
gene_biotype: protein_coding
description:
  DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: FTT_1388
symbol: FTT_1388
gene_biotype: protein_coding
description:
  Similar to AAO81619 (Q833S4) Conserved domain protein from Enterococcus faecalis (281 aa). FASTA: opt: 171 Z-score: 214.0 E(): 0.00046 Smith-Waterman score: 194;26.337 identity in 243 aa overlap ORF ftt1388.


ensembl_gene_id: FTT_1389
symbol: panB
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: FTT_1390
symbol: panC
gene_biotype: protein_coding
description:
  Pantoate-beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: FTT_1391
symbol: panD
gene_biotype: protein_coding
description:
  Aspartate-1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: FTT_1393c
symbol: recD
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V, alpha subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and r [...]


ensembl_gene_id: FTT_1394c
symbol: recB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V beta chain; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repai [...]


ensembl_gene_id: FTT_1395c
symbol: FTT_1395c
gene_biotype: protein_coding
description:
  Similar Q8A303 ATP-dependent DNA helicase from Bacteriodes thetaiotamicron (511 aa). FASTA: opt: 496 Z-score: 533.4 E(): 7.4e-22 Smith-Waterman score: 815; 32.200 identity in 500 aa overlap ORF ftt1395c.


ensembl_gene_id: FTT_1396c
symbol: FTT_1396c
gene_biotype: protein_coding
description:
  Similar to AAO81663 (Q833N3) Conserved hypothetical protein from Entercoccus faecalis (203 aa). FASTA: opt: 155 Z-score: 198.6 E(): 0.0033 Smith-Waterman score: 155; 25.850 identity in 147 aa overlap ORF ftt1396c.


ensembl_gene_id: FTT_1397c
symbol: recC
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V gamma chain; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repa [...]


ensembl_gene_id: FTT_1399
symbol: FTT_1399
gene_biotype: protein_coding
description:
  Conserved hypothetical membrane, pseudogene; Similar to AAO90712 (Q83CC4) Hypothetical protein CBU1203 from Coxiella burnetti (550 aa). FASTA: opt: opt: 1847 Z-score: 2115.4 E(): 5.6e-110 Smith-Waterman score: 1847; 52.075 identity in 530 aa overlap. Contains a frameshift after aa 309 ORF ftt1398c.


ensembl_gene_id: FTT_1401
symbol: FTT_1401
gene_biotype: protein_coding
description:
  Prophage repressor protein; Similar to Q8HA35 Repressor (217 aa). FASTA: opt: 183 Z-score: 217.7 E(): 0.00028 Smith-Waterman score: 225; 29.167 identity in 216 aa overlap ORF ftt1401.


ensembl_gene_id: FTT_1403c
symbol: feoA
gene_biotype: protein_coding
description:
  Similar to P33649 Ferrous iron transport protein A from E. coli (75 aa). FASTA: opt: 148 Z-score: 228.5 E(): 7.1e-05 Smith-Waterman score: 148; 31.081 identity in 74 aa overlap.


ensembl_gene_id: FTT_1404
symbol: FTT_1404
gene_biotype: protein_coding
description:
  Similar to Q8E9Y6 Cell division protein FtsN from Shewanella oneidensis (231 aa). FASTA: opt: 157 Z-score: 187.2 E(): 0.014 Smith-Waterman score: 180; 27.094 identity in 203 aa overlap ORF ftt1404.


ensembl_gene_id: FTT_1405c
symbol: gloB
gene_biotype: protein_coding
description:
  Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.


ensembl_gene_id: FTT_1408c
symbol: hemD
gene_biotype: protein_coding
description:
  Uroporphyrinogen III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: FTT_1409c
symbol: FTT_1409c
gene_biotype: protein_coding
description:
  Similar to Q8PK22 Hypothetical protein from Xanthomonas axonopodis (145 aa). FASTA: opt: 415 Z-score: 523.5 E(): 2.6e-21 Smith-Waterman score: 415; 45.652 identity in 138 aa overlap ORF ftt1409c.


ensembl_gene_id: FTT_1410
symbol: FTT_1410
gene_biotype: protein_coding
description:
  Similar to Q8XTB4 Probable transmembrane protein from Ralstonia solanacearum (184 aa). FASTA: opt: 443 Z-score: 558.2 E(): 3e-23 Smith-Waterman score: 443; 42.045 identity in 176 aa overlap ORF ftt1410.


ensembl_gene_id: FTT_1412
symbol: proS
gene_biotype: protein_coding
description:
  Transposase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of [...]


ensembl_gene_id: FTT_1413
symbol: FTT_1413
gene_biotype: protein_coding
description:
  Aminotransferase; Similar to Q886Y5 Aminotransferase, classes I and II from Pseudomonas syringae (382 aa). FASTA: opt: 929 Z-score: 1036.9 E(): 6.6e-50 Smith-Waterman score: 929; 37.076 identity in 383 aa overlap ORF ftt1413.


ensembl_gene_id: FTT_1417
symbol: FTT_1417
gene_biotype: protein_coding
description:
  Similar to Q8ZRJ8 Putative amidohydrolase from Salmonella typhimurium (255 aa). FASTA: opt: 723 Z-score: 882.8 E(): 2.6e-41 Smith-Waterman score: 723; 43.359 identity in 256 aa overlap ORF ftt1417.


ensembl_gene_id: FTT_1418c
symbol: nusB
gene_biotype: protein_coding
description:
  N utilisation substance protein B; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: FTT_1421
symbol: FTT_1421
gene_biotype: protein_coding
description:
  Similar to Q88E79 Conserved hypothetical protein from Pseudomonas putida (150 aa). FASTA: opt: 511 Z-score: 638.2 E(): 1.1e-27 Smith-Waterman score: 511; 46.809 identity in 141 aa overlap ORF ftt1421; Belongs to the UPF0260 family.


ensembl_gene_id: FTT_1422
symbol: FTT_1422
gene_biotype: protein_coding
description:
  Oxidoreductase; Similar to Q87UK0 Oxidoreductase, 2OG-Fe(II) oxygenase family (244 aa). FASTA: opt: 400 Z-score: 493.2 E(): 1.3e-19 33.163 identity in 196 aa overlap ORF ftt1422.


ensembl_gene_id: FTT_1423c
symbol: FTT_1423c
gene_biotype: protein_coding
description:
  Conservered hypothetical membrane protein; Similar to Q8NQW1 Predicted permease from Corynebacterium glutamicum (250 aa). FASTA: opt: 472 Z-score: 553.4 E(): 5.6e-23 Smith-Waterman score: 472; 35.573 identity in 253 aa overlap. ORF ftt1423c.


ensembl_gene_id: FTT_1424c
symbol: FTT_1424c
gene_biotype: protein_coding
description:
  Conservered hypothetical protein; Similar to Q89VN8 Bll1007 protein from Bradyrhizobium japonicum (345 aa). FASTA: opt: 834 Z-score: 1018.3 E(): 7.2e-49 Smith-Waterman score: 834; 53.509 identity in 228 aa overlap ORF ftt1424c.


ensembl_gene_id: FTT_1425c
symbol: naoX
gene_biotype: protein_coding
description:
  Similar to Q8XMF5 NADH oxidase from Clostridium perfringens (566 aa). FASTA: opt: 2055 Z-score: 2177.9 E(): 1.8e-113 57.117 identity in 548 aa overlap.


ensembl_gene_id: FTT_1426c
symbol: FTT_1426c
gene_biotype: protein_coding
description:
  Similar to Q8YQC8 Hypothetical protein from Anabaena sp. (177 aa). FASTA: opt: 465 Z-score: 572.2 E(): 5e-24 Smith-Waterman score: 465; 43.023 identity in 172 aa overlap ORF ftt1426c.


ensembl_gene_id: FTT_1428c
symbol: FTT_1428c
gene_biotype: protein_coding
description:
  Acetyltransferase; Similar to AAP10414 (Q81AS7) Acetyltransferase from Bacillus cereus (174 aa). FASTA: opt: 372 Z-score: 461.6 E(): 7.3e-18 Smith-Waterman score: 372; 40.341 identity in 176 aa overlap ORF ftt1428c.


ensembl_gene_id: FTT_1431
symbol: rhtC
gene_biotype: protein_coding
description:
  Methyltransferase, fragment; Similarity to Q8DCC3 tRNA (guanine-N(7)-)-methyltransferase (239 aa). FASTA: opt: 527 Z-score: 633.6 E(): 1.9e-27 Smith-Waterman score: 527; 54.861 identity in 144 aa overlap. Truncation at C-terminal according to FASTA hits ORF ftt1430c.


ensembl_gene_id: FTT_1432c
symbol: ppnK
gene_biotype: protein_coding
description:
  Inorganic phosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: FTT_1433
symbol: gtrB
gene_biotype: protein_coding
description:
  Similar to Q55487 Putative glycosyl transferase from Synechocystis sp. (318 aa). FASTA: opt: 1079 Z-score: 1283.0 E(): 1.3e-63 Smith-Waterman score: 1079; 50.000 identity in 298 aa overlap.


ensembl_gene_id: FTT_1434c
symbol: yadH
gene_biotype: protein_coding
description:
  Similar Q88LN3 ABC transporter,permease protein from Pseudomonas putida (259 aa). FASTA: opt: 890 Z-score: 979.2 E(): 1.1e-46 Smith-Waterman score: 890; 50.193 identity in 259 aa overlap.


ensembl_gene_id: FTT_1435c
symbol: yagD
gene_biotype: protein_coding
description:
  ABC transporter, ATP-binding protein; Similar to Q9CNG2 YagD from Pasteurella multocida (312 aa). FASTA: opt: 1028 Z-score: 1082.3 E(): 2e-52 Smith-Waterman score: 1028; 50.662 identity in 302 aa overlap.


ensembl_gene_id: FTT_1439c
symbol: FTT_1439c
gene_biotype: protein_coding
description:
  Conservered hypothetical protein, pseudogene; Similar to P73134 Hypothetical protein from Synechocystis sp. (104 aa). FASTA: 233 Z-score: 308.2 E(): 2.6e-09 Smith-Waterman score: 233; 41.584 identity in 101 aa overlap. Contains a frameshift after aa 18 ORF ftt1438c.


ensembl_gene_id: FTT_1441
symbol: FTT_1441
gene_biotype: protein_coding
description:
  Major facilitator superfamily (MFS) transport protein, pseudogene; Similar to Q8XAW5 Putative transport protein from E.coli (475 aa). FASTA: opt: 517 Z-score: 580.9 E(): 1.7e-24 Smith-Waterman score: 517; 27.007 identity in 411 aa overlap. Contains a frameshift after aa 45 ORF ftt1440c.


ensembl_gene_id: FTT_1443c
symbol: FTT_1443c
gene_biotype: protein_coding
description:
  Similar to Q87ZS7 ATPase, AAA family from Pseudomonas syringae (440 aa). FASTA: opt: 1018 Z-score: 1104.6 E(): 1.1e-53 Smith-Waterman score: 1096; 43.243 identity in 407 aa overlap ORF ftt1443c.


ensembl_gene_id: FTT_1444c
symbol: ppx
gene_biotype: protein_coding
description:
  Exopolyphosphatase; Similar to P44828 Putative exopolyphosphatase from Pneumophilus influenzae (323 aa). FASTA: opt: 730 Z-score: 856.9 E(): 7.1e-40 Smith-Waterman score: 730; 41.275 identity in 298 aa overlap.


ensembl_gene_id: FTT_1445
symbol: trxA1
gene_biotype: protein_coding
description:
  Thioredoxin; Similar to Q9JYY9 Thioredoxin from Neisseria meningitidis (110 aa). FASTA: opt: 452 Z-score: 595.9 E(): 2.4e-25 Smith-Waterman score: 452; 62.000 identity in 100 aa overlap; Belongs to the thioredoxin family.


ensembl_gene_id: FTT_1446
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: FTT_1447c
symbol: manB
gene_biotype: protein_coding
description:
  Similar to Q8UCV4 Phosphomannomutase from Agrobacterium tumefaciens (506 aa). FASTA: opt: 1226 Z-score: 1345.0 E(): 4.6e-67 Smith-Waterman score: 1226; 41.127 identity in 479 aa overlap.


ensembl_gene_id: FTT_1448c
symbol: manC
gene_biotype: protein_coding
description:
  Mannose-1-phosphate guanyltransferase; Similar to Q9ETR3 GDP-mannose pyrophosphorylase from Salmonella enterica (464 aa). FASTA: opt: 1571 Z-score: 1720.2 E(): 5.8e-88 Smith-Waterman score: 1571; 50.647 identity in 464 aa overlap; Belongs to the mannose-6-phosphate isomerase type 2 family.


ensembl_gene_id: FTT_1450c
symbol: wbtM
gene_biotype: protein_coding
description:
  Transposase; ISFtu1 12bp terminal inverted repeat; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: FTT_1451c
symbol: wbtL
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: FTT_1452c
symbol: wbtK
gene_biotype: protein_coding
description:
  Glycosyltransferase; Similar to Q8ECG2 Glycosyl transferase, group 2 family protein from Shewanella oneidensis (298 aa). FASTA: opt: 724 Z-score: 845.9 E(): 2.9e-39 Smith-Waterman score: 724; 39.789 identity in 284 aa overlap.


ensembl_gene_id: FTT_1453c
symbol: wzx
gene_biotype: protein_coding
description:
  O-antigen flippase; Similar to AAO39697(Q84DG4) O antigen flippase from E. coli (464 aa). FASTA: opt: 861 Z-score: 954.5 E(): 2.6e-45 Smith-Waterman score: 861; 31.343identity in 469 aa overlap.


ensembl_gene_id: FTT_1454c
symbol: wbtJ
gene_biotype: protein_coding
description:
  Formyl transferase; Similar to Q50721 Hypothetical protein Rv3404c precurser from Mycobacterium tuberculosis (234 aa). FASTA: opt: 562 Z-score: 656.5 E(): 1e-28 Smith-Waterman score: 562; 43.243 identity in 185 aa overlap.


ensembl_gene_id: FTT_1455c
symbol: wbtI
gene_biotype: protein_coding
description:
  Sugar transamine/perosamine synthetase; Similarity to Q97GL6 Sugar transaminase, involved in dTDP-4-amino-4,6-dideoxyglucose biosynthesis from Clostridium acetobutylicum (364 aa). FASTA: opt: 1344 Z-score: 1521.8 E(): 6.5e-77 Smith-Waterman score: 1344; 59.155 identity in 355 aa overlap; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: FTT_1456c
symbol: wbtH
gene_biotype: protein_coding
description:
  Similar to Q8GGB6 Asparagine synthase-like protein from Pseudomonas aeruginosa (627 aa). FASTA: opt: 1855 Z-score: 2052.2 E(): 1.9e-106 Smith-Waterman score: 1855; 46.022 identity in 641 aa overlap.


ensembl_gene_id: FTT_1457c
symbol: wbtG
gene_biotype: protein_coding
description:
  Similar to Q8ECG6 Glycosyl transferase group 1 family protein from Shewanella oneidensis (373 aa). FASTA: opt: 531 Z-score: 625.5 E(): 5.5e-27 Smith-Waterman score: 531; 32.353 identity in 374 aa overlap.


ensembl_gene_id: FTT_1459c
symbol: wbtF
gene_biotype: protein_coding
description:
  NAD dependent epimerase; Similar to Q8KN66 WbpP from Pseudomonas aeruginosa (341 aa). FASTA: opt: 1033 Z-score: 1225.7 E(): 2e-60 Smith-Waterman score: 1033; 51.562identity in 320 aa overlap.


ensembl_gene_id: FTT_1460c
symbol: wbtE
gene_biotype: protein_coding
description:
  UDP-glucose/GDP-mannose dehydrogenase; Similar to Q8EMC3 Vi polysaccharide biosynthesis from Oceanobacillus iheyensis (437 aa). FASTA: opt: 1817 Z-score: 2048.6 E(): 2.9e-106 Smith-Waterman score: 1817; 59.268 identity in 437 aa overlap; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: FTT_1461c
symbol: wbtD
gene_biotype: protein_coding
description:
  Similar to Q8EMF7 Galacturonosyl transferase from Oceanobacillus iheyensis (362 aa). FASTA: opt: 908 Z-score: 1050.2 E(): 1.2e-50 Smith-Waterman score: 908; 40.223 identity in 358 aa overlap.


ensembl_gene_id: FTT_1462c
symbol: wbtC
gene_biotype: protein_coding
description:
  Similar to Q9K6L4 UDP-glucose 4-epimerase from Bacillus halodurans (282 aa). FASTA: opt: 758 Z-score: 904.3 E(): 1.6e-42 Smith-Waterman score: 758; 45.455 identity in 264 aa overlap.


ensembl_gene_id: FTT_1463c
symbol: wbtB
gene_biotype: protein_coding
description:
  Similarity to Q9K6L3 Galactosyltransferase from Bacillus halodurans (207 aa). FASTA: opt: 902 Z-score: 1122.0 E(): 1.2e-54 Smith-Waterman score: 902; 66.667 identity in 195 aa overlap.


ensembl_gene_id: FTT_1464c
symbol: wbtA
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Similar to Q9S4V4 PglF from Campylobacter jejuni (590 aa). FASTA: opt: 1343 Z-score: 1435.9 E(): 3.9e-72 Smith-Waterman score: 1378; 43.543identity in 604 aa overlap.


ensembl_gene_id: FTT_1468c
symbol: nadC
gene_biotype: protein_coding
description:
  Similar to Q8DC25 Nicotinate-nucleotide pyrophosphorylase from Vibrio vulnificus (295 aa). FASTA: opt: 888 Z-score: 999.5 E(): 8e-48 Smith-Waterman score: 888; 53.737 identity in 281 aa overlap; Belongs to the NadC/ModD family.


ensembl_gene_id: FTT_1469c
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: FTT_1471c
symbol: deaD
gene_biotype: protein_coding
description:
  Cold-shock DEAD-box protein A; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.


ensembl_gene_id: FTT_1472c
symbol: ppiC
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase; Identical to Q9ETL6 Putative parvulin (Putative peptidyl-prolyl cis-trans isomerase) from Francisella tularensis ssp. tularensis strain SchuS4 (FSC237) (92 aa).


ensembl_gene_id: FTT_1473c
symbol: galP2
gene_biotype: protein_coding
description:
  Galactose-proton symporter, major facilitator superfamily (MFS) transport protein; Similar to GALP__ECOLI Galactose-proton symporter from E. coli (464 aa). FASTA: opt: 965 Z-score: 1103.1 E(): 1.4e-53 Smith-Waterman score: 965; 36.226 identity in 461 aa overlap; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: FTT_1474c
symbol: galP1
gene_biotype: protein_coding
description:
  Galactose-proton symporter, major facilitator superfamily (MFS) transport protein; Similar to AAO70555 (Q8XEV6) Galactose-proton symport from Salmonella typhimurium (464 aa). FASTA: opt: 1295 Z-score: 1483.7 E(): 8.6e-75 Smith-Waterman score: 1295; 45.140 identity in 463 aa overlap; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: FTT_1475
symbol: galT
gene_biotype: protein_coding
description:
  Similar to Q9CM11 Galactose-1-phosphate uridylyltransferase from Pasteurella multocida (348 aa). FASTA: opt: 1312 Z-score: 1558.0 E(): 6.2e-79 Smith-Waterman score: 1312; 56.231identity in 329 aa overlap.


ensembl_gene_id: FTT_1476
symbol: galK
gene_biotype: protein_coding
description:
  Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.


ensembl_gene_id: FTT_1477c
symbol: FTT_1477c
gene_biotype: protein_coding
description:
  Similar to Q88NK0 Conserved hypothetical protein from Pseudomonas putida (139 aa). FASTA: opt: 362 Z-score: 463.4 E(): 5.9e-18 Smith-Waterman score: 362; 40.458 identity in 131 aa overlap ORF ftt1477c.


ensembl_gene_id: FTT_1478c
symbol: kdsB
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonate cytidyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: FTT_1479c
symbol: FTT_1479c
gene_biotype: protein_coding
description:
  Similarity to Q8DAV0 Conserved hypothetical protein from Vibrio vulnificus (59 aa). FASTA: opt: 252 Z-score: 369.5 E(): 1e-12 Smith-Waterman score: 252; 56.140 identity in 57 aa overlap ORF ftt1479c; Belongs to the UPF0434 family.


ensembl_gene_id: FTT_1484c
symbol: aceF
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase, E2 component; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: FTT_1485c
symbol: aceE
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase, E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: FTT_1486c
symbol: FTT_1486c
gene_biotype: protein_coding
description:
  Similar to AAO91321 (Q83AQ3) Hypothetical protein from Coxiella burnetti (388 aa). FASTA: opt: 858 Z-score: 1007.0 E(): 3.1e-48 Smith-Waterman score: 858 38.504 identity in 361 aa overlap ORF ftt1486c.


ensembl_gene_id: FTT_1487
symbol: coaE
gene_biotype: protein_coding
description:
  Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: FTT_1488
symbol: trpS
gene_biotype: protein_coding
description:
  Similar to Q88NA1 Tryptophanyl-tRNA synthetase,putative from Pseudomonas putida (449 aa). FASTA: opt: 1172 Z-score: 1372.2 E(): 1.4e-68 Smith-Waterman score: 1172; 53.916 identity in 332 aa overlap; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: FTT_1490
symbol: FTT_1490
gene_biotype: protein_coding
description:
  Similar to Q9RZK7 NA+/H+ antiporter, putative, from Deinococcus radiodurans (422 aa). FASTA: opt: 529 Z-score: 612.1 E(): 3.1e-26 Smith-Waterman score: 771; 36.211 identity in 417 aa overlap ORF ftt1490.


ensembl_gene_id: FTT_1494c
symbol: murQ
gene_biotype: protein_coding
description:
  Glucokinase regulatory protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. Together with AnmK, is also required for the utilization of anhydro-N-acetylmuramic acid (anhMurNAc) either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling.


ensembl_gene_id: FTT_1498c
symbol: accA
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: FTT_1499
symbol: muts
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: FTT_1500
symbol: secB2
gene_biotype: protein_coding
description:
  Preprotein translocase, subunit B, chaperone protein; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.


ensembl_gene_id: FTT_1502
symbol: FTT_1502
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, pseudogene; Similar to Q8CK83 Hypothetical protein from Yersinia pestis (424 aa). FASTA: opt: 297 Z-score: 337.7 bits: 71.5 E(): 5.9e-11 Smith-Waterman score: 298; 24.884 identity in 430 aa overlap. Contains an in-frame stop codon after aa 343 ORF ftt1501.


ensembl_gene_id: FTT_1503
symbol: xerC
gene_biotype: protein_coding
description:
  Integrase/recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: FTT_1508c
symbol: relA
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: FTT_1510c
symbol: FTT_1510c
gene_biotype: protein_coding
description:
  Aromatic amino acid transporter of the HAAAP family; Similar to Q8DAB5 Tyrosine-specific transport protein from Vibrio vulnificus (401 aa). FASTA: opt: 804 Z-score: 930.6 E(): 5.5e-44 Smith-Waterman score: 804; 35.309 identity in 405 aa overlap ORF ftt1510.


ensembl_gene_id: FTT_1511
symbol: FTT_1511
gene_biotype: protein_coding
description:
  Similar to AAO90839 Membrane protein, putative from Coxiella burnetii (305 aa). FASTA: opt: 693 Z-score: 824.9 E(): 4.3e-38 Smith-Waterman score: 693; 38.776 identity in 294 aa overlap. ORF ftt1511.


ensembl_gene_id: FTT_1512c
symbol: dnaJ2
gene_biotype: protein_coding
description:
  Heat shock protein, hsp40; Similar to CAD85066 (Q82VD9) DnaJ N-terminal domain:DnaJ C terminal domain from Nitrosomonas europaea (314 aa). FASTA opt: 800 Z-score: 823.9 E(): 4.8e-38 39.482 identity in 309 aa overlap.


ensembl_gene_id: FTT_1514c
symbol: FTT_1514c
gene_biotype: protein_coding
description:
  Amino acid permease, fragment; Similar to Q9HT63 Probable transporter from Pseudomonas aeruginosa (449 aa). FASTA: opt: 476 Z-score: 561.3 E(): 2e-23 Smith-Waterman score: 476; 36.283 identity in 226 aa overlap. Truncated at C-terminal according to FASTA hits ORF ftt1513.


ensembl_gene_id: FTT_1515c
symbol: FTT_1515c
gene_biotype: protein_coding
description:
  Similar to Q8XMV7 Hypothetical protein CPE0581 from Clostridium perfrigens (195 aa). FASTA: opt: 348 Z-score: 432.5 E(): 3.1e-16 Smith-Waterman score: 348; 33.333 identity in 189 aa overlap. FTT1563 is more likely to be phosphatidylcoline synthase. ORF ftt1515c; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: FTT_1517c
symbol: merA
gene_biotype: protein_coding
description:
  Similar to Q92SF1 putative mercuric reductase protein from Rizobium meliloti (473aa). FASTA: opt: 1257 Z-score: 1348.4 E(): 2.9e-67 Smith-Waterman score: 1257; 41.895 identity in 475 aa overlap. Contains an in-frame stop codon after aa 358.


ensembl_gene_id: FTT_1518
symbol: ogt
gene_biotype: protein_coding
description:
  Similar to Q8A7W3 methylated-DNA--protein-cysteine methyltransferase from Bacteroides thetaiotaomicron (181aa). FASTA: opt: 443 Z-score: 536.8 bits: 106.7 E(): 4.8e-22 Smith-Waterman score: 443; 44.375 identity in 160 aa overlap. ogt in E.coli is a bifunctional protein containing an autotranscriptional activator at its carboxy domain and a methylated-DNA--protein-cysteine methyltransferase (MGMT) domain at its carboxy terminus. In Bacillus subtilis these two functions are independent and are referred to as adaA and adaB respectively.


ensembl_gene_id: FTT_1520c
symbol: gabP
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, pseudogene; Similar to Q87RC9 Putative outer membrane lipoprotein Slp from Vibrio parahaemolyticus (185 aa). FASTA: opt: 105 Z-score: 145.9 E(): 2.8 Smith-Waterman score: 105; 26.271identity in 118 aa overlap. Contains an in-frame stop codon after aa 32 and truncation at the C-terminal according to the FASTA matches ORF ftt1519.


ensembl_gene_id: FTT_1522c
symbol: lysA2
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase, pseudogene; Similar to Q8A800 diaminopimelate decarboxylase from Bacteroides thetaiotamicron (386 aa). FASTA: opt: 913 Z-score: 1066.5 E(): 1.5e-51 Smith-Waterman score: 1118; 48.000 identity in 375 aa overlap. Contains a frameshift after aa 924.


ensembl_gene_id: FTT_1524c
symbol: hrpA
gene_biotype: protein_coding
description:
  Similar to Q8ZE61 ATP-dependent helicase from Yersinia pestis (1280 aa). FASTA: opt: 2018 Z-score: 2071.8 E(): 1.5e-107 Smith-Waterman score: 2974; 38.714 identity in 1400 aa overlap.


ensembl_gene_id: FTT_1526c
symbol: idh
gene_biotype: protein_coding
description:
  Similar to Q8EDW2 Isocitrate dehydrogenase,NADP-dependent from Shewanella oneidensis (741 aa). FASTA: opt: 3146 Z-score: 3332.9 E(): 8.6e-178 65.574identity in 732 aa overlap; Belongs to the monomeric-type IDH family.


ensembl_gene_id: FTT_1527c
symbol: arsC2
gene_biotype: protein_coding
description:
  Similar to Q87MH6 Arsenate reductase from Vibrio parahaemolyticus (116 aa). FASTA: opt: 287 Z-score: 374.9 E(): 5e-13 Smith-Waterman score: 287; 38.739 identity in 111 aa overlap; Belongs to the ArsC family.


ensembl_gene_id: FTT_1528
symbol: fadD2
gene_biotype: protein_coding
description:
  Similar to Q8EE09 Long-chain-fatty-acid--CoA ligase from Shewanella oneidensis (557 aa). FASTA: opt: 1556 Z-score: 1747.3 E(): 1.8e-89 Smith-Waterman score: 1556; 42.908identity in 557 aa overlap.


ensembl_gene_id: FTT_1529
symbol: fadE
gene_biotype: protein_coding
description:
  Similar to Q87QC0 Oxidoreductase, acyl-CoA dehydrogenase from Vibrio parahaemolyticus (760 aa). FASTA: opt: 2322 Z-score: 2681.1 E(): 1.7e-141 Smith-Waterman score: 2333; 46.817 identity in 754 aa overlap.


ensembl_gene_id: FTT_1530
symbol: fadB/acbP
gene_biotype: protein_coding
description:
  Fusion product of 3-hydroxacyl-CoA dehydrogenase and acyl-CoA-binding protein; N-terminal (85 aa) similar to CBP_YEAST (P31787) Acyl-CoA-binding protein (ACBP) from Saccharomyces cerevisiae (86 aa). FASTA opt: 206 Z-score: 281.8 E(): 7.6e-08 Smith-Waterman score: 206; 44.444identity in 72 aa overlap. C-terminus (110-898) similar to Q8P986 3-hydroxacyl-CoA dehydrogenase from Xanthomonas campestris (790 aa). FASTA: opt: 2495 Z-score: 2747.5 E(): 3.5e-145 Smith-Waterman score: 2495;48.228 identity in 790 aa overlap No match to first 110 aa with Q8P986 or any other 3-hydroxacyl-CoA dehydro [...]


ensembl_gene_id: FTT_1531
symbol: fadA
gene_biotype: protein_coding
description:
  Similar to Q8PKZ4 3-ketoacyl-CoA thiolase from Xanthomonas axonopodis (401 aa). FASTA: opt: 1586 Z-score: 1755.7 E(): 6.1e-90 Smith-Waterman score: 1586; 61.616 identity in 396 aa overlap; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: FTT_1532
symbol: FTT_1532
gene_biotype: protein_coding
description:
  Similar to Q8ABB1 Conserved hypothetical protein from Bacteriodes thetaiotaomicron (163 aa). FASTA: opt: 237 Z-score: 310.7 E(): 1.9e-09 Smith-Waterman score: 237; 27.097 identity in 155 aa overlap ORF ftt1532.


ensembl_gene_id: FTT_1534c
symbol: FTT_1534c
gene_biotype: protein_coding
description:
  Similar to Q9ZNS0 Putative sugar transporter from Aribdopsis thaliana (508 aa). FASTA: opt: 409 Z-score: 463.9 E(): 5.5e-18 Smith-Waterman score: 499; 27.171 identity in 449 aa overlap. Contains a frameshift and a possible internal deletion of 50 aa after aa 199 ORF ftt1533c; Belongs to the NAPRTase family.


ensembl_gene_id: FTT_1536c
symbol: FTT_1536c
gene_biotype: protein_coding
description:
  Ornithine cyclodeaminase, pseudogene; Similar to OCD_AGRT5 (P09773) Ornithine cyclodeaminase from Agrobacterium tumefaciens (354 aa). FASTA: opt: 1034 Z-score: 1225.5 E(): 2.1e-60 Smith-Waterman score: 1034; 52.288 identity in 306 aa overlap. Contains a frameshift after aa 142 ORF ftt1535c.


ensembl_gene_id: FTT_1537c
symbol: FTT_1537c
gene_biotype: protein_coding
description:
  Similar to Q8DAW7 Conserved hypothetical protein from Vibrio vulnificus (448 aa). FASTA: opt: 455 Z-score: 511.9 E(): 1.2e-20 Smith-Waterman score: 520; 26.539 identity in 471 aa overlap ORF ftt1537c.


ensembl_gene_id: FTT_1539c
symbol: FTT_1539c
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to Q9PJ34 Putative periplasmic protein from Campylobacter jejuni (445 aa). FASTA: opt: 520 Z-score: 539.8 E(): 3.2e-22 Smith-Waterman score: 530; 27.673 identity in 477 aa overlap ORF ftt1539c.


ensembl_gene_id: FTT_1540c
symbol: FTT_1540c
gene_biotype: protein_coding
description:
  Similar to Q8EHZ4 Conserved hypothetical protein from Shewanella oneidensis (197 aa). FASTA: opt: 542 Z-score: 654.0 E(): 1.4e-28 Smith-Waterman score: 542; 41.584 identity in 202 aa overlap ORF ftt1540c.


ensembl_gene_id: FTT_1542c
symbol: omp26
gene_biotype: protein_coding
description:
  Similar to Q57483 Outer membrane protein 26 precursor (197 aa). FASTA: opt: 139 Z-score: 159.9 E(): 0.47 Smith-Waterman score: 139; 25.641 identity in 195 aa overlap.


ensembl_gene_id: FTT_1543
symbol: FTT_1543
gene_biotype: protein_coding
description:
  Similar to Q8UGQ7 Two component response regulator from Agrobacterium tumefaciens (252 aa). FASTA: opt: 684 Z-score: 819.7 E(): 8.4e-38 Smith-Waterman score: 684; 45.333 identity in 225 aa overlap ORF ftt1543.


ensembl_gene_id: FTT_1550
symbol: FTT_1550
gene_biotype: protein_coding
description:
  Similar to Q8EBW9 Conserved hypothetical protein (183 aa). FASTA: opt: 505 Z-score: 618.4 E(): 1.4e-26 Smith-Waterman score: 505; 40.237identity in 169 aa overlap ORF ftt1550.


ensembl_gene_id: FTT_1551
symbol: FTT_1551
gene_biotype: protein_coding
description:
  Oxidoreductase; Similar to Q888B1 Oxidoreductase,short chain dehydrogenase from Pseudomonas syringae (262 aa). FASTA: opt: 390 Z-score: 468.5 E(): 3e-18 Smith-Waterman score: 445; 32.143 identity in 252 aa overlap ORF ftt1551.


ensembl_gene_id: FTT_1552
symbol: ole1
gene_biotype: protein_coding
description:
  Similar to Q8PMP8 Delta 9 acyl-lipid fatty acid desaturase from Xanthomonas axonopodis (298 aa). FASTA: opt: 851 Z-score: 1027.5 E(): 2.2e-49 Smith-Waterman score: 851; 45.149identity in 268 aa overlap.


ensembl_gene_id: FTT_1553c
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: FTT_1554c
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthetase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: FTT_1555c
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: FTT_1556c
symbol: lepB
gene_biotype: protein_coding
description:
  Similar to AAO90612 9 83CL5) Signal peptidase I from Coxiella burnetii (259 aa). FASTA: opt: 716 Z-score: 839.6 E(): 6.5e-39 Smith-Waterman score: 717; 39.416 identity in 274 aa overlap; Belongs to the peptidase S26 family.


ensembl_gene_id: FTT_1557c
symbol: FTT_1557c
gene_biotype: protein_coding
description:
  Similar to AAO90736 DNA-binding response regulator from Coxiella burnetii (223 aa). FASTA: opt: 669 Z-score: 771.7 E(): 3.9e-35 Smith-Waterman score: 669; 45.778 identity in 225 aa overlap ORF ftt1557c.


ensembl_gene_id: FTT_1559c
symbol: proC
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, pseudogene; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: FTT_1560
symbol: FTT_1560
gene_biotype: protein_coding
description:
  HAM1 protein; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: FTT_1561
symbol: kdtA
gene_biotype: protein_coding
description:
  3-Deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: FTT_1562
symbol: ispA
gene_biotype: protein_coding
description:
  Similar to P45204 Geranyltranstransferase from Haemophilus influenzae (295 aa). FASTA: opt: 728 Z-score: 859.4 E(): 5.1e-40 Smith-Waterman score: 728; 43.972 identity in 282 aa overlap; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: FTT_1563
symbol: pcs
gene_biotype: protein_coding
description:
  Phosphatidylcholine synthase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: FTT_1564
symbol: ppk2
gene_biotype: protein_coding
description:
  Similar to Q9I6Z1 Hypothetical protein PA0141 from Pseudomonas aeruginosa (298 aa). FASTA: opt: 1210 Z-score: 1427.9 E(): 1.1e-71 Smith-Waterman score: 1210; 62.738 identity in 263 aa overlap ORF ftt1564.


ensembl_gene_id: FTT_1566c
symbol: FTT_1566c
gene_biotype: protein_coding
description:
  Similar to Q8KG78 Glycosyl hydrolase, family 3 from Chlorobium tepidum (372 aa). FASTA: opt: 811 Z-score: 919.2 E(): 2.4e-43 Smith-Waterman score: 811; 40.822 identity in 365 aa overlap. Contains a frameshift after aa 28 ORF ftt1565c.


ensembl_gene_id: FTT_1567c
symbol: FTT_1567c
gene_biotype: protein_coding
description:
  Hypothetical membrane protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.


ensembl_gene_id: FTT_1568c
symbol: lpxB
gene_biotype: protein_coding
description:
  Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: FTT_1569c
symbol: lpxA
gene_biotype: protein_coding
description:
  Acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: FTT_1570c
symbol: fabZ
gene_biotype: protein_coding
description:
  (3R)-hydroxymyristoyl-(acyl-carrier protein) dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: FTT_1572c
symbol: ompH
gene_biotype: protein_coding
description:
  Similar to OMPH_YEREN Cationic 19 kDa outer membrane protein from Yersinia enterocolitica (169 aa). FASTA: opt: 245 Z-score: 251.8 E(): 3.6e-06 Smith-Waterman score: 245; 28.000 identity in 150 aa overlap.


ensembl_gene_id: FTT_1573c
symbol: yaeT
gene_biotype: protein_coding
description:
  Outer membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: FTT_1574c
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: FTT_1575c
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase, subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: FTT_1578c
symbol: ung
gene_biotype: protein_coding
description:
  Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: FTT_1579c
symbol: FTT_1579c
gene_biotype: protein_coding
description:
  Similar to O25314 Type III restriction enzyme R protein from Helicobacter pylori (1001 aa). FASTA: opt: 1491 Z-score: 1485.7 E(): 6.6e-75 Smith-Waterman score: 2480; 42.828 identity in 990 aa overlap ORF ftt1579c.


ensembl_gene_id: FTT_1580c
symbol: FTT_1580c
gene_biotype: protein_coding
description:
  Identical to AAP83333 Hypothetical protein from Francisella tularensis ssp. tularensis strain SchuS4 (FSC237) (176 aa). ORF ftt1580c.


ensembl_gene_id: FTT_1581c
symbol: FTT_1581c
gene_biotype: protein_coding
description:
  Endonuclease; Similar to Q8DE33 Predicted endonuclease from Vibrio vulnificus (94 aa). FASTA: opt: 387 Z-score: 525.2 E(): 2.1e-21 Smith-Waterman score: 387; 61.798identity in 89 aa overlap ORF ftt1581c.


ensembl_gene_id: FTT_1589c
symbol: FTT_1589c
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, fragment; Similar to ABC-type transporter Q8D5S9 from Vibrio vulnificus (242 aa). FASTA: opt: 99 Z-score: 146.3 E(): 2.7 Smith-Waterman score: 99; 30.337 identity in 89 aa overlap ORF ftt1588c.


ensembl_gene_id: FTT_1590c
symbol: ubiG
gene_biotype: protein_coding
description:
  3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.


ensembl_gene_id: FTT_1591
symbol: FTT_1591
gene_biotype: protein_coding
description:
  Lipoprotein; Similar to Q9Z674 Lipoprotein from Zymomonas mobilis (256 aa). FASTA: opt: 352 Z-score: 404.8 E(): 1.1e-14 Smith-Waterman score: 352; 31.739 identity in 230 aa overlap ORF ftt1591.


ensembl_gene_id: FTT_1594
symbol: FTT_1594
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, fragment; Similar to Q8Y4H4 Hypothetical protein lmo2467 from Listeria monocytogenes (478 aa) opt: 362 Z-score: 427.2 E(): 6.1e-16 Smith-Waterman score: 362; 46.226 identity in 106 aa overlap ORF ftt1593c; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: FTT_1598
symbol: FTT_1598
gene_biotype: protein_coding
description:
  Hypothetical membrane protein; This CDS is disrupted by the insertion of an ISFtu1 element occurring very near the C-terminal end. It is not clear whether this insertion affects the function of the protein. ORF ftt1598.


ensembl_gene_id: FTT_1600c
symbol: fumA
gene_biotype: protein_coding
description:
  Fumerate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.


ensembl_gene_id: FTT_1601c
symbol: recG
gene_biotype: protein_coding
description:
  Similar to Q88C73 ATP-dependent DNA helicase RecG from Pseudomonas putida (692 aa). FASTA: opt: 1698 Z-score: 1867.5 E(): 3.6e-96 Smith-Waterman score: 1698; 41.314 identity in 685 aa overlap.


ensembl_gene_id: FTT_1603
symbol: rpmB
gene_biotype: protein_coding
description:
  Similar to AAP19069 (RL28_ECOLI) 50S ribosomal subunit protein L28 from E. coli (78 aa). FASTA: opt: 417 Z-score: 594.8 E(): 2.8e-25 Smith-Waterman score: 417; 77.922 identity in 77 aa overlap; Belongs to the bacterial ribosomal protein bL28 family.


ensembl_gene_id: FTT_1604
symbol: rpmG
gene_biotype: protein_coding
description:
  Similar to RL33_PASMU (P57912) 50S ribosomal protein L33 from Pasteurella multocida (56 aa). FASTA: opt: 286 Z-score: 453.0 E(): 2.2e-17 Smith-Waterman score: 286; 86.000 identity in 50 aa overlap; Belongs to the bacterial ribosomal protein bL33 family.


ensembl_gene_id: FTT_1605
symbol: minC
gene_biotype: protein_coding
description:
  Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: FTT_1606
symbol: minD
gene_biotype: protein_coding
description:
  Similar to Q8FWX1 Septum site-determining protein MinD from Brucella suis(271 aa). FASTA: opt: 1091 Z-score: 1181.8 E(): 5.6e-58 Smith-Waterman score: 1091; 62.825 identity in 269 aa overlap.


ensembl_gene_id: FTT_1607
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor protein; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: FTT_1608
symbol: FTT_1608
gene_biotype: protein_coding
description:
  Similar to YRBF_HAEIN Probable ABC transporter ATP-binding protein HI1087 from Haemophilus influenzae (264 aa). FASTA: opt: 861 Z-score: 970.8 E(): 3.2e-46 Smith-Waterman score: 861; 50.958identity in 261 aa overlap Equivalent to yrbF of yrb operon in E.coli ORF ftt1608.


ensembl_gene_id: FTT_1609
symbol: FTT_1609
gene_biotype: protein_coding
description:
  ABC transporter, membrane protein; Similar Q8VUQ9 Toluene resistance protein Trg1 from Pseudomonas putida (265 aa). FASTA: opt: 793 Z-score: 934.5 E(): 3.4e-44 Smith-Waterman score: 793; 55.869 identity in 213 aa overlap Equivalent to yrbE of yrb operon in E.coli ORF ftt1609.


ensembl_gene_id: FTT_1610
symbol: mlaD
gene_biotype: protein_coding
description:
  ABC transporter, periplasmic protein,pseudogene; Similar to YRBD_HAEIN P45029 Hypothetical protein HI1085 from Haemophilus influenzae (167 aa).


ensembl_gene_id: FTT_1611
symbol: FTT_1611
gene_biotype: protein_coding
description:
  Conserved hypothetcial protein; Similar to YRBC_ECOLI Protein yrbC precursor from E. coli (211 aa). FASTA: opt: 230 Z-score: 278.3 E(): 1.2e-07 Smith-Waterman score: 230; 26.147 identity in 218 aa overlap Equivalent to yrbC of yrb operon in E.coli ORF ftt1611.


ensembl_gene_id: FTT_1612
symbol: FTT_1612
gene_biotype: protein_coding
description:
  Similar to YRBB_ECOLI Hypothetical protein yrbB from E. coli (97 aa). FASTA: opt: 116 Z-score: 165.8 E(): 0.22 Smith-Waterman score: 116; 31.915identity in 47 aa overlap Equivalent to yrbB of yrb operon in E.coli ORF ftt1612.


ensembl_gene_id: FTT_1613
symbol: FTT_1613
gene_biotype: protein_coding
description:
  Similar to Q8ZB55 BolA-like protein from Yersinia pestis (87 aa). FASTA: opt: 163 Z-score: 236.9 E(): 2.4e-05 Smith-Waterman score: 163; 35.526 identity in 76 aa overlap Equivalent to yrbA of yrb operon in E.coli ORF ftt1613; Belongs to the BolA/IbaG family.


ensembl_gene_id: FTT_1616
symbol: cysS
gene_biotype: protein_coding
description:
  Similar to Q87YQ2 Cysteinyl-tRNA synthetase from Pseudomonas syringae (460 aa). FASTA: opt: 1782 Z-score: 1992.3 E(): 4e-103 Smith-Waterman score: 1782; 56.332 identity in 458 aa overlap; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: FTT_1617
symbol: hemK
gene_biotype: protein_coding
description:
  Adenine-specific methylase, HemK family; Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue; Belongs to the protein N5-glutamine methyltransferase family. PrmB subfamily.


ensembl_gene_id: FTT_1628c
symbol: FTT_1628c
gene_biotype: protein_coding
description:
  Similar to Q88C61 putative metal ion transporter from Pseudomonas putida (446 aa). FASTA: opt: 1033 Z-score: 1180.6 E(): 6.5e-58 Smith-Waterman score: 1035; 40.455 identity in 440 aa overlap ORF ftt1628c.


ensembl_gene_id: FTT_1630c
symbol: putP
gene_biotype: protein_coding
description:
  Sodium/proline permease; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: FTT_1631c
symbol: gplX
gene_biotype: protein_coding
description:
  Similar to Q9A8H0 GlpX protein from Caulobacter crescentus (317 aa). FASTA: opt: 1181 Z-score: 1301.4 E(): 1.2e-64 Smith-Waterman score: 1181; 58.786 identity in 313 aa overlap.


ensembl_gene_id: FTT_1632c
symbol: FTT_1632c
gene_biotype: protein_coding
description:
  Similar to AAO91263 (Q83AV9) Hypothetical protein from Coxiella burnetti (205 aa). FASTA: opt: 552 Z-score: 685.2 E(): 2.6e-30 Smith-Waterman score: 552; 41.000 identity in 200 aa overlap ORF ftt1632c.


ensembl_gene_id: FTT_1633c
symbol: FTT_1633c
gene_biotype: protein_coding
description:
  Amino acid transporter; Similiar to AAP09999 (Q81BU4) Lysine-specific permease from Bacillus cereus (491 aa). FASTA: opt: 1734 Z-score: 1972.4 bits: 374.4 E(): 5.2e-102 Smith-Waterman score: 1817; 53.459 identity in 477 aa overlap ORF ftt1633c.


ensembl_gene_id: FTT_1635
symbol: ftsK
gene_biotype: protein_coding
description:
  Similar to Q9I0M3 Cell division protein FtsK from Rickettsia prowazekii (811 aa). FASTA: opt: 2030 Z-score: 2059.0 E(): 7.7e-107 Smith-Waterman score: 2197; 45.808 identity in 823 aa overlap.


ensembl_gene_id: FTT_1636
symbol: lolA
gene_biotype: protein_coding
description:
  Lipoprotein releasing system, subunit A, outer membrane lipoproteins carrier; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: FTT_1638
symbol: trkH
gene_biotype: protein_coding
description:
  Potassium uptake protein; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.


ensembl_gene_id: FTT_1644
symbol: isftu1-41
gene_biotype: protein_coding
description:
  Transposase, pseudogene; ISFtu1 12bp terminal inverted repeat; Belongs to the glycosyl hydrolase 32 family.


ensembl_gene_id: FTT_1645
symbol: FTT_1645
gene_biotype: protein_coding
description:
  Similar to Q8EDM5 Conserved hypothetical protein from Shewanella oneidensis (384 aa). FASTA: opt: 372 Z-score: 419.7 E(): 1.6e-15 Smith-Waterman score: 372; 23.018 identity in 391 aa overlap ORF ftt1645.


ensembl_gene_id: FTT_1646
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality.


ensembl_gene_id: FTT_1647c
symbol: pyrD
gene_biotype: protein_coding
description:
  Similar to Q9WYG8 Dihydroorotate dehydrogenase from Pyrobaculum aerophilum (297 aa). FASTA: opt: 148 Z-score: 178.6 E(): 0.043 Smith-Waterman score: 191; 26.568 identity in 271 aa overlap.


ensembl_gene_id: FTT_1648c
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP).


ensembl_gene_id: FTT_1650c
symbol: FTT_1650c
gene_biotype: protein_coding
description:
  Similar to Q87VL0 Transglutaminase-like superfamily domain protein from Pseudomonas syringae (1092 aa). FASTA: opt: 4030 Z-score: 4586.9 bits: 860.5 E(): 0 Smith-Waterman score: 4030; 53.724 identity in 1074 aa overlap. Contains a stop codon after aa 769 ORF ftt1649.


ensembl_gene_id: FTT_1651
symbol: FTT_1651
gene_biotype: protein_coding
description:
  Similar to Q8KDD5 Hypothetical protein from Chlorobium tepidum (215 aa). FASTA: opt: 569 z-score: 706.8 E(): 1.6e-31 Smith-Waterman score: 569; 40.580 identity in 207 aa overlap ORF ftt1651.


ensembl_gene_id: FTT_1652c
symbol: FTT_1652c
gene_biotype: protein_coding
description:
  Similar to Q8EFC8 Transcriptional regulator, LysR family from Shewanella oneidensis (291 aa). FASTA: opt: 443 Z-score: 527.9 E(): 1.5e-21 Smith-Waterman score: 443; 29.831 identity in 295 aa overlap ORF ftt1652c; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: FTT_1654
symbol: emrA2
gene_biotype: protein_coding
description:
  HlyD family secretion protein; Similar to AAO90332 (Q83DE0) Multidrug resistance protein from Coxiella burnetii (331 aa). FASTA: opt: 406 z-score: 447.9 E(): 4.2e-17 Smith-Waterman score: 406; 28.135 identity in 327 aa overlap.


ensembl_gene_id: FTT_1656c
symbol: FTT_1656c
gene_biotype: protein_coding
description:
  Similiar to Q8PGE2 Hypothetical protein from Xanthomonas axonopodis(186 aa). FASTA: opt: 578 Z-score: 703.0 E(): 2.6e-31 Smith-Waterman score: 578; 51.462 identity in 171 aa overlap ORF ftt1656c.


ensembl_gene_id: FTT_1658c
symbol: FTT_1658c
gene_biotype: protein_coding
description:
  Similar to BAC68773 (Q82P70) Hypothetical protein from Streptomyces avermitilis (95 aa). FASTA: opt: 135 Z-score: 188.6 E(): 0.012 Smith-Waterman score: 135; 25.316 identity in 79 aa overlap ORF ftt1658c.


ensembl_gene_id: FTT_1660c
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase; Similar to Q8P8I4 Dihydroorotase from Xanthomonas campestris (449 aa). FASTA: opt: 1640 z-score: 1944.6 E(): 1.8e-100 Smith-Waterman score: 1640; 56.054 identity in 446 aa overlap.


ensembl_gene_id: FTT_1661
symbol: tmpT
gene_biotype: protein_coding
description:
  Similar to TPMT_PSESJ Thiopurine S-methyltransferase from Pseudomonas syringae (218 aa). FASTA: opt: 370 z-score: 455.2 E(): 1.7e-17 Smith-Waterman score: 370; 35.165 identity in 182 aa overlap; Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family.


ensembl_gene_id: FTT_1663
symbol: carA
gene_biotype: protein_coding
description:
  Acid phosphatase, pseudogene; Similar to Q9APF7 Major acid phosphatase from Legionella pneumophila (395 aa). FASTA: opt 803 Z-score: 934.8 E(): 3.2e-44 Smith-Waterman score: 803; 39.359 identity in 343 aa overlap. Contains an in-frame stop codon after aa 159. ORF ftt1662c; Belongs to the CarA family.


ensembl_gene_id: FTT_1664
symbol: carB
gene_biotype: protein_coding
description:
  Similar to CARB_CAUCR (Q9A4D6) Carbamoyl-phosphate synthase large chain from Caulobacter crescentus (1099 aa). FASTA: opt: 3982 Z-score: 4191.3 E(): 0 59.798 identity in 1087 aa overlap.


ensembl_gene_id: FTT_1665
symbol: pyrB
gene_biotype: protein_coding
description:
  Similar to PYRB_METJA Aspartate carbamoyltransferase from Methanococcus jannaschii (306 aa). FASTA: opt: 943 Z-score: 1081.5 E(): 2.2e-52 Smith-Waterman score: 943; 49.338 identity in 302 aa overlap; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.


ensembl_gene_id: FTT_1666c
symbol: FTT_1666c
gene_biotype: protein_coding
description:
  Similar to AAP10961 (Q819E3) 3-hydroxyisobutyrate dehydrogenase from Bacillus cereus (292 aa). FASTA: opt: 384 z-score: 452.2 E(): 2.4e-17 Smith-Waterman score: 384; 24.483 identity in 290 aa overlap ORF ftt1666c.


ensembl_gene_id: FTT_1668
symbol: sdaC2
gene_biotype: protein_coding
description:
  Similar to Q8ZGH6 Serine transporter from Yersinia pestis (433 aa). FASTA: opt: 1336 Z-score: 1510.1 E(): 2.9e-76 Smith-Waterman score: 1336; 46.078identity in 408 aa overlap.


ensembl_gene_id: FTT_1671
symbol: ribD
gene_biotype: protein_coding
description:
  Na+/H+ antiporter, fragment; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: FTT_1672
symbol: ribB
gene_biotype: protein_coding
description:
  Similar to Q8GDW2 Riboflavin synthase alpha chain from Heliobacillus mobilis (228 aa). FASTA: opt: 508 z-score: 619.3 E(): 1.2e-26 Smith-Waterman score: 508; 41.624 identity in 197 aa overlap.


ensembl_gene_id: FTT_1673
symbol: ribA
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein ribA/GTP-cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the N-terminal section; belongs to the DHBP synthase family.


ensembl_gene_id: FTT_1674
symbol: ribH
gene_biotype: protein_coding
description:
  Riboflavin synthase beta subunit (6,7-dimethl-8-ribityllumazine synthase); Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family.


ensembl_gene_id: FTT_1677c
symbol: trmU
gene_biotype: protein_coding
description:
  tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: FTT_1678c
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: FTT_1680c
symbol: olmA
gene_biotype: protein_coding
description:
  Outer membrane lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: FTT_1681c
symbol: lpcA
gene_biotype: protein_coding
description:
  Similar to Q8EK08 Phosphoheptose isomerase from Shewanella oneidensis (197 aa). FASTA: opt: 705 z-score: 847.8 E(): 2.3e-39 Smith-Waterman score: 705; 53.684 identity in 190 aa overlap.


ensembl_gene_id: FTT_1683c
symbol: FTT_1683c
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, pseudogene; Similar to AAP08939 (Q81EK2) Hypothetical protein from Bacillus cereus (755 aa). FASTA: opt: 1438 Z-score: 1569.7 E(): 1.4e-79 Smith-Waterman score: 1459; 32.429 identity in 737 aa overlap. Contains a frameshift after aa 234 and an in-frame stop codon after aa 314 ORF ftt1682.


ensembl_gene_id: FTT_1684
symbol: FTT_1684
gene_biotype: protein_coding
description:
  Similar to Q8D3N4 Transcriptional regulator from Vibrio vulnificus (307 aa). FASTA: opt: 510 Z-score: 590.3 E(): 5e-25 32.975 identity in 279 aa overlap ORF ftt1684; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: FTT_1686c
symbol: FTT_1686c
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: FTT_1687c
symbol: gidB
gene_biotype: protein_coding
description:
  Methyltransferase glucose-inhibited cell division protein; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.


ensembl_gene_id: FTT_1688
symbol: FTT_1688
gene_biotype: protein_coding
description:
  Aromatic amino acid transporter of the HAAAP family; Similar to Q8EFB8 Tyrosine-specific transport protein from Shewanella oneidensis (395 aa). FASTA: opt: 854 z-score: 967.0 E(): 5.2e-46 38.378 identity in 370 aa overlap ORF ftt1688.


ensembl_gene_id: FTT_1689c
symbol: FTT_1689c
gene_biotype: protein_coding
description:
  Similar to CAD84514 (Q82WQ9) Possible transmembrane protein from Nitrosomonas europaea (223 aa). FASTA: opt: 294 z-score: 358.6 E(): 4e-12 25.481 identity in 208 aa overlap ORF ftt1689c.


ensembl_gene_id: FTT_1690
symbol: FTT_1690
gene_biotype: protein_coding
description:
  Similar to Q9ABA7 NADH dehydrogenase from Caulobacter crescentus (220 aa). FASTA: opt: 429 z-score: 535.0 E(): 6e-22 35.545 identity in 211 aa overlap ORF ftt1690.


ensembl_gene_id: FTT_1691
symbol: FTT_1691
gene_biotype: protein_coding
description:
  Hypothetical protein; This CDS is disrupted by the insertion of an ISFtu1 element occurring very near the C-terminal end. It is not clear whether this insertion affects the function of the protein. ORF ftt1691.


ensembl_gene_id: FTT_1693c
symbol: FTT_1693c
gene_biotype: protein_coding
description:
  Similar to Q87SC0 conserved hypothetical protein from Vibrio parahaemolyticus (258 aa). FASTA: opt: 724 z-score: 845.1 E(): 3.2e-39 46.094 identity in 256 aa overlap ORF ftt1693c; Belongs to the UPF0246 family.


ensembl_gene_id: FTT_1694c
symbol: FTT_1694c
gene_biotype: protein_coding
description:
  Similar to Q8ZCK6 Putative membrane protein (Hypothetical) from Yersinia pestis (175 aa). FASTA: opt:353 z-score 450 E():2.9e-17 35.9identity in 142 aa overlap ORF ftt1694c.


