# pathwayInfo

id: PF00333
description: Ribosomal protein S5, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00333
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF00333_Ribosomal_protein_S5,_N-terminal_domain


id: PF00393
description: 6-phosphogluconate dehydrogenase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00393
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF00393_6-phosphogluconate_dehydrogenase,_C-terminal_domain


id: PF00479
description: Glucose-6-phosphate dehydrogenase, NAD binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00479
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF00479_Glucose-6-phosphate_dehydrogenase,_NAD_binding_domain


id: PF00482
description: Type II secretion system (T2SS), protein F
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00482
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF00482_Type_II_secretion_system_(T2SS),_protein_F


id: PF00586
description: AIR synthase related protein, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00586
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF00586_AIR_synthase_related_protein,_N-terminal_domain


id: PF00587
description: tRNA synthetase class II core domain (G, H, P, S and T)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00587
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF00587_tRNA_synthetase_class_II_core_domain_(G,_H,_P,_S_and_T)


id: PF00590
description: Tetrapyrrole (Corrin/Porphyrin) Methylases
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00590
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF00590_Tetrapyrrole_(Corrin/Porphyrin)_Methylases


id: PF00707
description: Translation initiation factor IF-3, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00707
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF00707_Translation_initiation_factor_IF-3,_C-terminal_domain


id: PF00828
description: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00828
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF00828_Ribosomal_proteins_50S-L15,_50S-L18e,_60S-L27A


id: PF00861
description: Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00861
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF00861_Ribosomal_L18_of_archaea,_bacteria,_mitoch._and_chloroplast


id: PF00905
description: Penicillin binding protein transpeptidase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00905
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF00905_Penicillin_binding_protein_transpeptidase_domain


id: PF00984
description: UDP-glucose/GDP-mannose dehydrogenase family, central domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00984
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF00984_UDP-glucose/GDP-mannose_dehydrogenase_family,_central_domain


id: PF01135
description: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01135
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF01135_Protein-L-isoaspartate(D-aspartate)_O-methyltransferase_(PCMT)


id: PF01176
description: Translation initiation factor 1A / IF-1
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01176
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF01176_Translation_initiation_factor_1A_/_IF-1


id: PF01182
description: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01182
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF01182_Glucosamine-6-phosphate_isomerases/6-phosphogluconolactonase


id: PF01255
description: Putative undecaprenyl diphosphate synthase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01255
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF01255_Putative_undecaprenyl_diphosphate_synthase


id: PF01258
description: Prokaryotic dksA/traR C4-type zinc finger
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01258
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF01258_Prokaryotic_dksA/traR_C4-type_zinc_finger


id: PF01272
description: Transcription elongation factor, GreA/GreB, C-term
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01272
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF01272_Transcription_elongation_factor,_GreA/GreB,_C-term


id: PF01326
description: Pyruvate phosphate dikinase, AMP/ATP-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01326
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF01326_Pyruvate_phosphate_dikinase,_AMP/ATP-binding_domain


id: PF01370
description: NAD dependent epimerase/dehydratase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01370
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF01370_NAD_dependent_epimerase/dehydratase_family


id: PF01406
description: tRNA synthetases class I (C) catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01406
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF01406_tRNA_synthetases_class_I_(C)_catalytic_domain


id: PF01409
description: tRNA synthetases class II core domain (F)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01409
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF01409_tRNA_synthetases_class_II_core_domain_(F)


id: PF01420
description: Type I restriction modification DNA specificity domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01420
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF01420_Type_I_restriction_modification_DNA_specificity_domain


id: PF01558
description: Pyruvate ferredoxin/flavodoxin oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01558
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF01558_Pyruvate_ferredoxin/flavodoxin_oxidoreductase


id: PF01566
description: Natural resistance-associated macrophage protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01566
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF01566_Natural_resistance-associated_macrophage_protein


id: PF01663
description: Type I phosphodiesterase / nucleotide pyrophosphatase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01663
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF01663_Type_I_phosphodiesterase_/_nucleotide_pyrophosphatase


id: PF01790
description: Prolipoprotein diacylglyceryl transferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01790
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF01790_Prolipoprotein_diacylglyceryl_transferase


id: PF01812
description: 5-formyltetrahydrofolate cyclo-ligase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01812
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF01812_5-formyltetrahydrofolate_cyclo-ligase_family


id: PF01855
description: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01855
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF01855_Pyruvate_flavodoxin/ferredoxin_oxidoreductase,_thiamine_diP-bdg


id: PF02075
description: Crossover junction endodeoxyribonuclease RuvC
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02075
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF02075_Crossover_junction_endodeoxyribonuclease_RuvC


id: PF02082
description: Iron-dependent Transcriptional regulator
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02082
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF02082_Iron-dependent_Transcriptional_regulator


id: PF02452
description: PemK-like, MazF-like toxin of type II toxin-antitoxin system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02452
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF02452_PemK-like,_MazF-like_toxin_of_type_II_toxin-antitoxin_system


id: PF02583
description: Metal-sensitive transcriptional repressor
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02583
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF02583_Metal-sensitive_transcriptional_repressor


id: PF02683
description: Cytochrome C biogenesis protein transmembrane region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02683
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF02683_Cytochrome_C_biogenesis_protein_transmembrane_region


id: PF02768
description: DNA polymerase III beta subunit, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02768
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF02768_DNA_polymerase_III_beta_subunit,_C-terminal_domain


id: PF02769
description: AIR synthase related protein, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02769
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF02769_AIR_synthase_related_protein,_C-terminal_domain


id: PF02775
description: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02775
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF02775_Thiamine_pyrophosphate_enzyme,_C-terminal_TPP_binding_domain


id: PF02781
description: Glucose-6-phosphate dehydrogenase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02781
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF02781_Glucose-6-phosphate_dehydrogenase,_C-terminal_domain


id: PF02786
description: Carbamoyl-phosphate synthase L chain, ATP binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02786
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF02786_Carbamoyl-phosphate_synthase_L_chain,_ATP_binding_domain


id: PF02826
description: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02826
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF02826_D-isomer_specific_2-hydroxyacid_dehydrogenase,_NAD_binding_domain


id: PF02844
description: Phosphoribosylglycinamide synthetase, N domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02844
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF02844_Phosphoribosylglycinamide_synthetase,_N_domain


id: PF02867
description: Ribonucleotide reductase, barrel domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02867
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF02867_Ribonucleotide_reductase,_barrel_domain


id: PF02875
description: Mur ligase family, glutamate ligase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02875
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF02875_Mur_ligase_family,_glutamate_ligase_domain


id: PF02896
description: PEP-utilising enzyme, PEP-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02896
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF02896_PEP-utilising_enzyme,_PEP-binding_domain


id: PF03033
description: Glycosyltransferase family 28 N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03033
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF03033_Glycosyltransferase_family_28_N-terminal_domain


id: PF03118
description: Bacterial RNA polymerase, alpha chain C terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03118
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF03118_Bacterial_RNA_polymerase,_alpha_chain_C_terminal_domain


id: PF03449
description: Transcription elongation factor, N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03449
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF03449_Transcription_elongation_factor,_N-terminal


id: PF03699
description: Uncharacterised protein family (UPF0182)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03699
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF03699_Uncharacterised_protein_family_(UPF0182)


id: PF03717
description: Penicillin-binding Protein dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03717
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF03717_Penicillin-binding_Protein_dimerisation_domain


id: PF03719
description: Ribosomal protein S5, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03719
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF03719_Ribosomal_protein_S5,_C-terminal_domain


id: PF03721
description: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03721
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF03721_UDP-glucose/GDP-mannose_dehydrogenase_family,_NAD_binding_domain


id: PF03726
description: Polyribonucleotide nucleotidyltransferase, RNA binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03726
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF03726_Polyribonucleotide_nucleotidyltransferase,_RNA_binding_domain


id: PF04020
description: Mycobacterial 4 TMS phage holin, superfamily IV
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04020
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF04020_Mycobacterial_4_TMS_phage_holin,_superfamily_IV


id: PF04101
description: Glycosyltransferase family 28 C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04101
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF04101_Glycosyltransferase_family_28_C-terminal_domain


id: PF04464
description: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04464
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF04464_CDP-Glycerol:Poly(glycerophosphate)_glycerophosphotransferase_


id: PF04952
description: Succinylglutamate desuccinylase / Aspartoacylase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04952
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF04952_Succinylglutamate_desuccinylase_/_Aspartoacylase_family


id: PF05016
description: ParE toxin of type II toxin-antitoxin system, parDE
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05016
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF05016_ParE_toxin_of_type_II_toxin-antitoxin_system,_parDE


id: PF05157
description: Type II secretion system (T2SS), protein E, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05157
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF05157_Type_II_secretion_system_(T2SS),_protein_E,_N-terminal_domain


id: PF05198
description: Translation initiation factor IF-3, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05198
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF05198_Translation_initiation_factor_IF-3,_N-terminal_domain


id: PF05973
description: Phage derived protein Gp49-like (DUF891)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05973
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF05973_Phage_derived_protein_Gp49-like_(DUF891)


id: PF06415
description: BPG-independent PGAM N-terminus (iPGM_N)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06415
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF06415_BPG-independent_PGAM_N-terminus_(iPGM_N)


id: PF06750
description: Bacterial Peptidase A24 N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06750
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF06750_Bacterial_Peptidase_A24_N-terminal_domain


id: PF07521
description: Zn-dependent metallo-hydrolase RNA specificity domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07521
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF07521_Zn-dependent_metallo-hydrolase_RNA_specificity_domain


id: PF07685
description: CobB/CobQ-like glutamine amidotransferase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07685
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF07685_CobB/CobQ-like_glutamine_amidotransferase_domain


id: PF07927
description: HicA toxin of bacterial toxin-antitoxin,
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07927
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF07927_HicA_toxin_of_bacterial_toxin-antitoxin,_


id: PF07963
description: Prokaryotic N-terminal methylation motif
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07963
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF07963_Prokaryotic_N-terminal_methylation_motif


id: PF08207
description: Elongation factor P (EF-P) KOW-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08207
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF08207_Elongation_factor_P_(EF-P)_KOW-like_domain


id: PF08264
description: Anticodon-binding domain of tRNA ligase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08264
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF08264_Anticodon-binding_domain_of_tRNA_ligase


id: PF08541
description: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08541
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF08541_3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III_C_terminal__


id: PF08545
description: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08545
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF08545_3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III


id: PF08843
description: Nucleotidyl transferase AbiEii toxin, Type IV TA system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08843
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF08843_Nucleotidyl_transferase_AbiEii_toxin,_Type_IV_TA_system


id: PF09721
description: Transmembrane exosortase (Exosortase_EpsH)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09721
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF09721_Transmembrane_exosortase_(Exosortase_EpsH)


id: PF10017
description: Histidine-specific methyltransferase, SAM-dependent
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10017
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF10017_Histidine-specific_methyltransferase,_SAM-dependent


id: PF10131
description: 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10131
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF10131_6-pyruvoyl-tetrahydropterin_synthase_related_domain;_membrane_protein


id: PF10385
description: RNA polymerase beta subunit external 1 domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10385
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF10385_RNA_polymerase_beta_subunit_external_1_domain


id: PF10648
description: Immunoglobulin-like domain of bacterial spore germination
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10648
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF10648_Immunoglobulin-like_domain_of_bacterial_spore_germination


id: PF11258
description: Protein of unknown function (DUF3048) N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11258
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF11258_Protein_of_unknown_function_(DUF3048)_N-terminal_domain


id: PF11969
description: Scavenger mRNA decapping enzyme C-term binding
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11969
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF11969_Scavenger_mRNA_decapping_enzyme_C-term_binding


id: PF12169
description: DNA polymerase III subunits gamma and tau domain III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12169
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF12169_DNA_polymerase_III_subunits_gamma_and_tau_domain_III


id: PF12367
description: Pyruvate ferredoxin oxidoreductase beta subunit C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12367
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF12367_Pyruvate_ferredoxin_oxidoreductase_beta_subunit_C_terminal


id: PF12850
description: Calcineurin-like phosphoesterase superfamily domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12850
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF12850_Calcineurin-like_phosphoesterase_superfamily_domain


id: PF13231
description: Dolichyl-phosphate-mannose-protein mannosyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13231
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF13231_Dolichyl-phosphate-mannose-protein_mannosyltransferase


id: PF13399
description: LytR cell envelope-related transcriptional attenuator
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13399
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF13399_LytR_cell_envelope-related_transcriptional_attenuator


id: PF13416
description: Bacterial extracellular solute-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13416
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF13416_Bacterial_extracellular_solute-binding_protein


id: PF13588
description: Type I restriction enzyme R protein N terminus (HSDR_N)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13588
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF13588_Type_I_restriction_enzyme_R_protein_N_terminus_(HSDR_N)


id: PF13738
description: Pyridine nucleotide-disulphide oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13738
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF13738_Pyridine_nucleotide-disulphide_oxidoreductase


id: PF14572
description: Phosphoribosyl synthetase-associated domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14572
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF14572_Phosphoribosyl_synthetase-associated_domain


id: PF14602
description: Hexapeptide repeat of succinyl-transferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14602
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF14602_Hexapeptide_repeat_of_succinyl-transferase


id: PF14667
description: Polysaccharide biosynthesis C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14667
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF14667_Polysaccharide_biosynthesis_C-terminal_domain


id: PF14693
description: Ribosomal protein TL5, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14693
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF14693_Ribosomal_protein_TL5,_C-terminal_domain


id: PF16192
description: C-terminal four TMM region of protein-O-mannosyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16192
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF16192_C-terminal_four_TMM_region_of_protein-O-mannosyltransferase_


id: PF17136
description: Ribosomal proteins 50S L24/mitochondrial 39S L24
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17136
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF17136_Ribosomal_proteins_50S_L24/mitochondrial_39S_L24


id: PF17479
description: Protein of unknown function (DUF3048) C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17479
name:
  Protein Domains (Pfam).STRING_v12.0_1797724_STRINGid_PF17479_Protein_of_unknown_function_(DUF3048)_C-terminal_domain


id: SM00065
description: Domain present in phytochromes and cGMP-specific phosphodiesterases.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00065
name:
  Protein Domains (SMART).STRING_v12.0_1797724_STRINGid_SM00065_Domain_present_in_phytochromes_and_cGMP-specific_phosphodiesterases.


id: SM00089
description: Repeats in polycystic kidney disease 1 (PKD1) and other proteins
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00089
name:
  Protein Domains (SMART).STRING_v12.0_1797724_STRINGid_SM00089_Repeats_in_polycystic_kidney_disease_1_(PKD1)_and_other_proteins


id: SM00228
description: Domain present in PSD-95, Dlg, and ZO-1/2.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00228
name:
  Protein Domains (SMART).STRING_v12.0_1797724_STRINGid_SM00228_Domain_present_in_PSD-95,_Dlg,_and_ZO-1/2.


id: SM00278
description: Helix-hairpin-helix DNA-binding motif class 1
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00278
name:
  Protein Domains (SMART).STRING_v12.0_1797724_STRINGid_SM00278_Helix-hairpin-helix_DNA-binding_motif_class_1


id: SM00316
description: Ribosomal protein S1-like RNA-binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00316
name:
  Protein Domains (SMART).STRING_v12.0_1797724_STRINGid_SM00316_Ribosomal_protein_S1-like_RNA-binding_domain


id: SM00347
description: Helix_turn_helix multiple antibiotic resistance protein
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00347
name:
  Protein Domains (SMART).STRING_v12.0_1797724_STRINGid_SM00347_Helix_turn_helix_multiple_antibiotic_resistance_protein


id: SM00382
description: ATPases associated with a variety of cellular activities
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00382
name:
  Protein Domains (SMART).STRING_v12.0_1797724_STRINGid_SM00382_ATPases_associated_with_a_variety_of_cellular_activities


id: SM00411
description: Bacterial (prokaryotic) histone like domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00411
name:
  Protein Domains (SMART).STRING_v12.0_1797724_STRINGid_SM00411_Bacterial_(prokaryotic)_histone_like_domain


id: SM00418
description: Helix_turn_helix, Arsenical Resistance Operon Repressor
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00418
name:
  Protein Domains (SMART).STRING_v12.0_1797724_STRINGid_SM00418_Helix_turn_helix,_Arsenical_Resistance_Operon_Repressor


id: SM00464
description: Found in ATP-dependent protease La (LON)
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00464
name:
  Protein Domains (SMART).STRING_v12.0_1797724_STRINGid_SM00464_Found_in_ATP-dependent_protease_La_(LON)


id: SM00471
description: Metal dependent phosphohydrolases with conserved HD motif.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00471
name:
  Protein Domains (SMART).STRING_v12.0_1797724_STRINGid_SM00471_Metal_dependent_phosphohydrolases_with_conserved_HD_motif.


id: SM00490
description: Helicase superfamily c-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00490
name:
  Protein Domains (SMART).STRING_v12.0_1797724_STRINGid_SM00490_Helicase_superfamily_c-terminal_domain


id: SM00493
description: Topoisomerases, DnaG-type primases, OLD family nucleases and RecR proteins
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00493
name:
  Protein Domains (SMART).STRING_v12.0_1797724_STRINGid_SM00493_Topoisomerases,_DnaG-type_primases,_OLD_family_nucleases_and_RecR_proteins


id: SM00530
description: Helix-turn-helix XRE-family like proteins
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00530
name:
  Protein Domains (SMART).STRING_v12.0_1797724_STRINGid_SM00530_Helix-turn-helix_XRE-family_like_proteins


id: SM00670
description: Large family of predicted nucleotide-binding domains
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00670
name:
  Protein Domains (SMART).STRING_v12.0_1797724_STRINGid_SM00670_Large_family_of_predicted_nucleotide-binding_domains


id: SM00729
description: Elongator protein 3, MiaB family, Radical SAM
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00729
name:
  Protein Domains (SMART).STRING_v12.0_1797724_STRINGid_SM00729_Elongator_protein_3,_MiaB_family,_Radical_SAM


id: SM00732
description: Likely ribonuclease with RNase H fold.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00732
name:
  Protein Domains (SMART).STRING_v12.0_1797724_STRINGid_SM00732_Likely_ribonuclease_with_RNase_H_fold.


id: SM00739
description: KOW (Kyprides, Ouzounis, Woese) motif.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00739
name:
  Protein Domains (SMART).STRING_v12.0_1797724_STRINGid_SM00739_KOW_(Kyprides,_Ouzounis,_Woese)_motif.


id: SM00748
description: Higher Eukarytoes and Prokaryotes Nucleotide-binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00748
name:
  Protein Domains (SMART).STRING_v12.0_1797724_STRINGid_SM00748_Higher_Eukarytoes_and_Prokaryotes_Nucleotide-binding_domain


id: SM00760
description: Bacterial dnaA protein helix-turn-helix domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00760
name:
  Protein Domains (SMART).STRING_v12.0_1797724_STRINGid_SM00760_Bacterial_dnaA_protein_helix-turn-helix_domain


id: SM00843
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00843
name:
  Protein Domains (SMART).STRING_v12.0_1797724_STRINGid_SM00843_This_domain_directs_oriented_DNA_translocation_and_forms_a_winged_helix_structure._Mutated_proteins_with_substitutions_in_the_FtsK_gamma_DNA-recognition_helix_are_impaired_in_DNA_binding.

description:
  This domain directs oriented DNA translocation and forms a winged helix structure. Mutated proteins with substitutions in the FtsK gamma DNA-recognition helix are impaired in DNA binding.


id: SM00863
description: Threonyl and Alanyl tRNA synthetase second additional domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00863
name:
  Protein Domains (SMART).STRING_v12.0_1797724_STRINGid_SM00863_Threonyl_and_Alanyl_tRNA_synthetase_second_additional_domain


id: SM00865
description: Tubulin/FtsZ family, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00865
name:
  Protein Domains (SMART).STRING_v12.0_1797724_STRINGid_SM00865_Tubulin/FtsZ_family,_C-terminal_domain


id: SM00896
description: Ferredoxin-fold anticodon binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00896
name:
  Protein Domains (SMART).STRING_v12.0_1797724_STRINGid_SM00896_Ferredoxin-fold_anticodon_binding_domain


id: SM00934
description: Orotidine 5-phosphate decarboxylase / HUMPS family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00934
name:
  Protein Domains (SMART).STRING_v12.0_1797724_STRINGid_SM00934_Orotidine_5-phosphate_decarboxylase_/_HUMPS_family


id: SM00937
description: This domain is found in peptide chain release factors.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00937
name:
  Protein Domains (SMART).STRING_v12.0_1797724_STRINGid_SM00937_This_domain_is_found_in_peptide_chain_release_factors.


id: SM01096
description: Carbamoyl-phosphate synthetase large chain, oligomerisation domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01096
name:
  Protein Domains (SMART).STRING_v12.0_1797724_STRINGid_SM01096_Carbamoyl-phosphate_synthetase_large_chain,_oligomerisation_domain


id: SM01209
description: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01209
name:
  Protein Domains (SMART).STRING_v12.0_1797724_STRINGid_SM01209_Phosphoribosylglycinamide_synthetase,_ATP-grasp_(A)_domain


id: SM01382
description: Ribosomal Proteins L2, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01382
name:
  Protein Domains (SMART).STRING_v12.0_1797724_STRINGid_SM01382_Ribosomal_Proteins_L2,_C-terminal_domain


id: SM01383
description: Ribosomal Proteins L2, RNA binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01383
name:
  Protein Domains (SMART).STRING_v12.0_1797724_STRINGid_SM01383_Ribosomal_Proteins_L2,_RNA_binding_domain


id: SM01390
description: Ribosomal protein S4/S9 N-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01390
name:
  Protein Domains (SMART).STRING_v12.0_1797724_STRINGid_SM01390_Ribosomal_protein_S4/S9_N-terminal_domain


id: SM01400
description: N-terminal domain of ribose phosphate pyrophosphokinase
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01400
name:
  Protein Domains (SMART).STRING_v12.0_1797724_STRINGid_SM01400_N-terminal_domain_of_ribose_phosphate_pyrophosphokinase


