# geneInfo

ensembl_gene_id: A2005_00005
symbol: OGR31823.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00010
symbol: OGR31824.1
gene_biotype: protein_coding
description:
  Addiction module antidote protein, HigA family; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00015
symbol: OGR31825.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_00025
symbol: OGR31827.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00030
symbol: OGR31828.1
gene_biotype: protein_coding
description:
  Menaquinol oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00035
symbol: OGR31829.1
gene_biotype: protein_coding
description:
  Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: A2005_00040
symbol: OGR31830.1
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00045
symbol: OGR31831.1
gene_biotype: protein_coding
description:
  Polysulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00060
symbol: kdsB
gene_biotype: protein_coding
description:
  3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: A2005_00065
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: A2005_00070
symbol: kdsA
gene_biotype: protein_coding
description:
  3-deoxy-8-phosphooctulonate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the KdsA family.


ensembl_gene_id: A2005_00075
symbol: OGR31853.1
gene_biotype: protein_coding
description:
  D-arabinose 5-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily.


ensembl_gene_id: A2005_00080
symbol: OGR31837.1
gene_biotype: protein_coding
description:
  Phenylphosphate carboxylase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00085
symbol: OGR31838.1
gene_biotype: protein_coding
description:
  LPS export ABC transporter periplasmic protein LptC; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_00090
symbol: OGR31839.1
gene_biotype: protein_coding
description:
  Lipopolysaccharide transport periplasmic protein LptA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00095
symbol: OGR31840.1
gene_biotype: protein_coding
description:
  LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00100
symbol: OGR31841.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: A2005_00105
symbol: OGR31842.1
gene_biotype: protein_coding
description:
  Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00110
symbol: OGR31843.1
gene_biotype: protein_coding
description:
  PTS fructose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00115
symbol: hprK
gene_biotype: protein_coding
description:
  HPr kinase/phosphorylase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr).


ensembl_gene_id: A2005_00145
symbol: OGR31850.1
gene_biotype: protein_coding
description:
  Phosphocarrier protein HPr; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00150
symbol: OGR31851.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate--protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: A2005_00155
symbol: OGR31852.1
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AdoMet synthase family.


ensembl_gene_id: A2005_00160
symbol: OGR30215.1
gene_biotype: protein_coding
description:
  Iron transporter FeoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00170
symbol: OGR30205.1
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: A2005_00185
symbol: OGR30208.1
gene_biotype: protein_coding
description:
  Rubrerythrin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00190
symbol: katG
gene_biotype: protein_coding
description:
  Catalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.


ensembl_gene_id: A2005_00195
symbol: tatC
gene_biotype: protein_coding
description:
  Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: A2005_00215
symbol: OGR30214.1
gene_biotype: protein_coding
description:
  C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_00220
symbol: atpE
gene_biotype: protein_coding
description:
  Sodium:proton antiporter; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: A2005_00225
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0 subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: A2005_00235
symbol: OGR32683.1
gene_biotype: protein_coding
description:
  Magnesium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00250
symbol: OGR32686.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: A2005_00255
symbol: OGR32687.1
gene_biotype: protein_coding
description:
  Macrolide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00275
symbol: A2005_00275
gene_biotype: protein_coding
description:
  Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_00285
symbol: greB
gene_biotype: protein_coding
description:
  Transcription elongation factor GreB; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length.


ensembl_gene_id: A2005_00290
symbol: OGR32928.1
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphatase A; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).


ensembl_gene_id: A2005_00295
symbol: OGR32929.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.


ensembl_gene_id: A2005_00300
symbol: OGR32930.1
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: A2005_00305
symbol: recA
gene_biotype: protein_coding
description:
  Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: A2005_00310
symbol: OGR32932.1
gene_biotype: protein_coding
description:
  Type IV pili twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00320
symbol: OGR32934.1
gene_biotype: protein_coding
description:
  alanine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00325
symbol: cbiA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: A2005_00330
symbol: OGR33460.1
gene_biotype: protein_coding
description:
  Phosphomethylpyrimidine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00335
symbol: OGR33461.1
gene_biotype: protein_coding
description:
  Sirohydrochlorin cobaltochelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00340
symbol: OGR33462.1
gene_biotype: protein_coding
description:
  precorrin-8X methylmutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00345
symbol: cbiM
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.


ensembl_gene_id: A2005_00355
symbol: OGR33465.1
gene_biotype: protein_coding
description:
  Cobalt ECF transporter T component CbiQ; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_00360
symbol: OGR33466.1
gene_biotype: protein_coding
description:
  Energy-coupling factor ABC transporter ATP-binding protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.


ensembl_gene_id: A2005_00365
symbol: cbiD
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CbiD; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.


ensembl_gene_id: A2005_00370
symbol: OGR33467.1
gene_biotype: protein_coding
description:
  precorrin-6Y-methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00380
symbol: A2005_00380
gene_biotype: protein_coding
description:
  Precorrin-2 C(20)-methyltransferase; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00385
symbol: OGR33469.1
gene_biotype: protein_coding
description:
  Cobalt-precorrin 5A hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00405
symbol: OGR31819.1
gene_biotype: protein_coding
description:
  Rhombosortase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_00410
symbol: OGR31820.1
gene_biotype: protein_coding
description:
  VWA domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00420
symbol: clpA
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpA; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: A2005_00440
symbol: rpsU
gene_biotype: protein_coding
description:
  30S ribosomal protein S21; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS21 family.


ensembl_gene_id: A2005_00445
symbol: OGR32052.1
gene_biotype: protein_coding
description:
  Type I glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: A2005_00450
symbol: OGR32053.1
gene_biotype: protein_coding
description:
  Fructose-1,6-bisphosphate aldolase, class II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00455
symbol: OGR32054.1
gene_biotype: protein_coding
description:
  2-nitropropane dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00460
symbol: OGR32056.1
gene_biotype: protein_coding
description:
  Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00465
symbol: OGR32055.1
gene_biotype: protein_coding
description:
  Type I polyketide synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_00470
symbol: OGR32012.1
gene_biotype: protein_coding
description:
  ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: A2005_00480
symbol: OGR32014.1
gene_biotype: protein_coding
description:
  AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00485
symbol: OGR32015.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00490
symbol: ahcY
gene_biotype: protein_coding
description:
  Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: A2005_00505
symbol: OGR30230.1
gene_biotype: protein_coding
description:
  Ferritin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00520
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: A2005_00535
symbol: OGR30235.1
gene_biotype: protein_coding
description:
  3-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00540
symbol: OGR30236.1
gene_biotype: protein_coding
description:
  Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00545
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: A2005_00550
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: A2005_00555
symbol: ftsQ
gene_biotype: protein_coding
description:
  Hypothetical protein; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.


ensembl_gene_id: A2005_00560
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: A2005_00570
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: A2005_00575
symbol: OGR30243.1
gene_biotype: protein_coding
description:
  Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.


ensembl_gene_id: A2005_00580
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: A2005_00585
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: A2005_00590
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: A2005_00595
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: A2005_00600
symbol: OGR30248.1
gene_biotype: protein_coding
description:
  Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00605
symbol: OGR30249.1
gene_biotype: protein_coding
description:
  Cell division protein FtsL; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00610
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA (cytosine(1402)-N(4))-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: A2005_00615
symbol: mraZ
gene_biotype: protein_coding
description:
  Division/cell wall cluster transcriptional repressor MraZ; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MraZ family.


ensembl_gene_id: A2005_00635
symbol: OGR30255.1
gene_biotype: protein_coding
description:
  Fructose-bisphosphatase, class II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00640
symbol: OGR30256.1
gene_biotype: protein_coding
description:
  Transport-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00650
symbol: ruvC
gene_biotype: protein_coding
description:
  Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: A2005_00655
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: A2005_00660
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: A2005_00680
symbol: queH
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).


ensembl_gene_id: A2005_00685
symbol: OGR30264.1
gene_biotype: protein_coding
description:
  Phasin superfamily protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00690
symbol: OGR30265.1
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis protein UbiB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00695
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: A2005_00700
symbol: OGR30267.1
gene_biotype: protein_coding
description:
  PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00705
symbol: OGR30268.1
gene_biotype: protein_coding
description:
  Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00710
symbol: OGR33747.1
gene_biotype: protein_coding
description:
  Type II secretion system protein GspF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00715
symbol: OGR33748.1
gene_biotype: protein_coding
description:
  Type II secretion system protein GspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.


ensembl_gene_id: A2005_00720
symbol: OGR33749.1
gene_biotype: protein_coding
description:
  Type II secretion system protein GspD; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_00730
symbol: OGR33751.1
gene_biotype: protein_coding
description:
  DoxX family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00735
symbol: OGR33752.1
gene_biotype: protein_coding
description:
  Amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00755
symbol: OGR29166.1
gene_biotype: protein_coding
description:
  DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00765
symbol: A2005_00765
gene_biotype: protein_coding
description:
  Peptidase M48; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00770
symbol: OGR29168.1
gene_biotype: protein_coding
description:
  Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00775
symbol: OGR29169.1
gene_biotype: protein_coding
description:
  Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00790
symbol: OGR29172.1
gene_biotype: protein_coding
description:
  GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00800
symbol: OGR29175.1
gene_biotype: protein_coding
description:
  Arylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00805
symbol: OGR29174.1
gene_biotype: protein_coding
description:
  ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00825
symbol: OGR33063.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pirin family.


ensembl_gene_id: A2005_00830
symbol: OGR33064.1
gene_biotype: protein_coding
description:
  NAD(P)H:quinone oxidoreductase, type IV; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00835
symbol: OGR33065.1
gene_biotype: protein_coding
description:
  ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00850
symbol: A2005_00850
gene_biotype: protein_coding
description:
  Aldehyde oxidase; Metagenomic; derived from metagenome: subsurface metagenome; Belongs to the NAD(P)-dependent epimerase/dehydratase family.


ensembl_gene_id: A2005_00855
symbol: OGR33098.1
gene_biotype: protein_coding
description:
  NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00860
symbol: OGR33099.1
gene_biotype: protein_coding
description:
  Vi polysaccharide biosynthesis protein VipB/TviC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00865
symbol: OGR33117.1
gene_biotype: protein_coding
description:
  GDP-mannose dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: A2005_00895
symbol: OGR33118.1
gene_biotype: protein_coding
description:
  Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00920
symbol: OGR33109.1
gene_biotype: protein_coding
description:
  Stage II sporulation protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00925
symbol: OGR33110.1
gene_biotype: protein_coding
description:
  Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family.


ensembl_gene_id: A2005_00930
symbol: OGR33111.1
gene_biotype: protein_coding
description:
  Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00940
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: A2005_00945
symbol: OGR33113.1
gene_biotype: protein_coding
description:
  Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: A2005_00950
symbol: OGR33114.1
gene_biotype: protein_coding
description:
  Integration host factor subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial histone-like protein family.


ensembl_gene_id: A2005_00955
symbol: OGR33115.1
gene_biotype: protein_coding
description:
  Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_00960
symbol: OGR33116.1
gene_biotype: protein_coding
description:
  30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.


ensembl_gene_id: A2005_00970
symbol: A2005_00970
gene_biotype: protein_coding
description:
  Type II secretion system protein GspG; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_01000
symbol: OGR33482.1
gene_biotype: protein_coding
description:
  Type II secretion system protein GspN; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_01005
symbol: lon
gene_biotype: protein_coding
description:
  Endopeptidase La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: A2005_01015
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophan--tRNA ligase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: A2005_01020
symbol: OGR33486.1
gene_biotype: protein_coding
description:
  DUF4177 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01065
symbol: A2005_01065
gene_biotype: protein_coding
description:
  XRE family transcriptional regulator; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01075
symbol: OGR33674.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: A2005_01085
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: A2005_01090
symbol: asnS
gene_biotype: protein_coding
description:
  asparagine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01105
symbol: OGR33680.1
gene_biotype: protein_coding
description:
  Cell filamentation protein Fic; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_01115
symbol: A2005_01115
gene_biotype: protein_coding
description:
  Part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01125
symbol: OGR29575.1
gene_biotype: protein_coding
description:
  Putative addiction module antidote protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01130
symbol: OGR29576.1
gene_biotype: protein_coding
description:
  Addiction module protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01140
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH dehydrogenase (quinone) subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.  In the C-terminal section; belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: A2005_01145
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: A2005_01170
symbol: OGR29584.1
gene_biotype: protein_coding
description:
  Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01175
symbol: OGR29585.1
gene_biotype: protein_coding
description:
  Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01205
symbol: A2005_01205
gene_biotype: protein_coding
description:
  Transketolase; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_01210
symbol: OGR29035.1
gene_biotype: protein_coding
description:
  Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01235
symbol: OGR29039.1
gene_biotype: protein_coding
description:
  Nuclease SbcCD subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01240
symbol: OGR29040.1
gene_biotype: protein_coding
description:
  Nuclease SbcCD subunit D; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01245
symbol: OGR29041.1
gene_biotype: protein_coding
description:
  Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01265
symbol: A2005_01265
gene_biotype: protein_coding
description:
  Very short patch repair endonuclease; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01275
symbol: OGR31931.1
gene_biotype: protein_coding
description:
  DNA (cytosine-5-)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01290
symbol: A2005_01290
gene_biotype: protein_coding
description:
  Antirepressor; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01295
symbol: purM
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine cyclo-ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01300
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: A2005_01305
symbol: rpmB
gene_biotype: protein_coding
description:
  50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family.


ensembl_gene_id: A2005_01310
symbol: OGR31936.1
gene_biotype: protein_coding
description:
  Reactive intermediate/imine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01315
symbol: OGR31937.1
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: A2005_01320
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: A2005_01330
symbol: OGR31940.1
gene_biotype: protein_coding
description:
  YicC family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01350
symbol: OGR31943.1
gene_biotype: protein_coding
description:
  methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01355
symbol: OGR31944.1
gene_biotype: protein_coding
description:
  cob(I)yrinic acid a,c-diamide adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.


ensembl_gene_id: A2005_01360
symbol: OGR31945.1
gene_biotype: protein_coding
description:
  Antitoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01365
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase B catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate.


ensembl_gene_id: A2005_01370
symbol: pyrK
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).


ensembl_gene_id: A2005_01375
symbol: OGR31038.1
gene_biotype: protein_coding
description:
  Ribosomal-protein-alanine N-acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.


ensembl_gene_id: A2005_01380
symbol: OGR31039.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: A2005_01385
symbol: OGR31040.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: A2005_01390
symbol: OGR31041.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.


ensembl_gene_id: A2005_01395
symbol: OGR31042.1
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: A2005_01400
symbol: OGR31043.1
gene_biotype: protein_coding
description:
  Phosphomannomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01405
symbol: OGR31044.1
gene_biotype: protein_coding
description:
  Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mannose-6-phosphate isomerase type 2 family.


ensembl_gene_id: A2005_01410
symbol: fcl
gene_biotype: protein_coding
description:
  GDP-fucose synthetase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.


ensembl_gene_id: A2005_01415
symbol: gmd
gene_biotype: protein_coding
description:
  GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.


ensembl_gene_id: A2005_01425
symbol: guaB
gene_biotype: protein_coding
description:
  IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: A2005_01430
symbol: OGR31049.1
gene_biotype: protein_coding
description:
  Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01445
symbol: vapC
gene_biotype: protein_coding
description:
  Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.


ensembl_gene_id: A2005_01450
symbol: OGR31424.1
gene_biotype: protein_coding
description:
  Toxin-antitoxin system toxin subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01465
symbol: OGR31413.1
gene_biotype: protein_coding
description:
  Putative toxin-antitoxin system toxin component, PIN family; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01470
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: A2005_01475
symbol: OGR31414.1
gene_biotype: protein_coding
description:
  Penicillin-binding protein 1C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01485
symbol: OGR31416.1
gene_biotype: protein_coding
description:
  Thioredoxin-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01490
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: A2005_01495
symbol: lipB
gene_biotype: protein_coding
description:
  Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: A2005_01500
symbol: OGR31418.1
gene_biotype: protein_coding
description:
  Rubredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01505
symbol: OGR31419.1
gene_biotype: protein_coding
description:
  Isoprenoid biosynthesis protein ElbB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01510
symbol: OGR31420.1
gene_biotype: protein_coding
description:
  Cro/Cl family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01525
symbol: OGR31423.1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01555
symbol: A2005_01555
gene_biotype: protein_coding
description:
  Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01565
symbol: A2005_01565
gene_biotype: protein_coding
description:
  Quinone oxidoreductase; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01590
symbol: nfi
gene_biotype: protein_coding
description:
  Hypothetical protein; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA.


ensembl_gene_id: A2005_01610
symbol: OGR29450.1
gene_biotype: protein_coding
description:
  Phosphate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01615
symbol: OGR29451.1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01620
symbol: ackA
gene_biotype: protein_coding
description:
  Propionate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: A2005_01630
symbol: OGR29454.1
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: A2005_01640
symbol: OGR29456.1
gene_biotype: protein_coding
description:
  Cytochrome B6; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01645
symbol: OGR29457.1
gene_biotype: protein_coding
description:
  Cytochrome B6; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: A2005_01685
symbol: pyrC
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: A2005_01690
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: A2005_01695
symbol: pyrR
gene_biotype: protein_coding
description:
  Bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.


ensembl_gene_id: A2005_01705
symbol: lepA
gene_biotype: protein_coding
description:
  Signal peptidase I; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: A2005_01730
symbol: OGR33323.1
gene_biotype: protein_coding
description:
  Cofactor-independent phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01735
symbol: xerD
gene_biotype: protein_coding
description:
  Site-specific tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: A2005_01740
symbol: glnD
gene_biotype: protein_coding
description:
  [protein-PII] uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.


ensembl_gene_id: A2005_01750
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: A2005_01760
symbol: OGR33327.1
gene_biotype: protein_coding
description:
  Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: A2005_01765
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily.


ensembl_gene_id: A2005_01775
symbol: OGR33330.1
gene_biotype: protein_coding
description:
  HIT family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01795
symbol: OGR33334.1
gene_biotype: protein_coding
description:
  Nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01805
symbol: OGR33335.1
gene_biotype: protein_coding
description:
  phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).


ensembl_gene_id: A2005_01810
symbol: livF
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter ATP-binding protein; With LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01815
symbol: livG
gene_biotype: protein_coding
description:
  Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01820
symbol: OGR33337.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: A2005_01875
symbol: OGR33261.1
gene_biotype: protein_coding
description:
  Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01890
symbol: OGR33264.1
gene_biotype: protein_coding
description:
  MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01895
symbol: OGR33265.1
gene_biotype: protein_coding
description:
  Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01915
symbol: OGR33269.1
gene_biotype: protein_coding
description:
  Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01935
symbol: OGR33271.1
gene_biotype: protein_coding
description:
  Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01960
symbol: OGR33276.1
gene_biotype: protein_coding
description:
  Cysteine desulfurase NifS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01975
symbol: OGR33279.1
gene_biotype: protein_coding
description:
  Sterol desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01980
symbol: OGR33280.1
gene_biotype: protein_coding
description:
  Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_01990
symbol: clpA-2
gene_biotype: protein_coding
description:
  Hypothetical protein; Metagenomic; derived from metagenome: subsurface metagenome; Belongs to the ClpA/ClpB family.


ensembl_gene_id: A2005_01995
symbol: clpS
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease adaptor ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: A2005_02020
symbol: rplQ
gene_biotype: protein_coding
description:
  50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02025
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: A2005_02030
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: A2005_02035
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: A2005_02040
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: A2005_02045
symbol: rpmJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L36; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL36 family.


ensembl_gene_id: A2005_02050
symbol: map
gene_biotype: protein_coding
description:
  Type I methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: A2005_02055
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: A2005_02060
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: A2005_02065
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: A2005_02070
symbol: rpmD
gene_biotype: protein_coding
description:
  50S ribosomal protein L30; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02075
symbol: rpsE
gene_biotype: protein_coding
description:
  30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: A2005_02080
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: A2005_02085
symbol: rplF
gene_biotype: protein_coding
description:
  50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: A2005_02090
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: A2005_02095
symbol: rplE
gene_biotype: protein_coding
description:
  50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: A2005_02100
symbol: rplX
gene_biotype: protein_coding
description:
  50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: A2005_02105
symbol: rplN
gene_biotype: protein_coding
description:
  50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: A2005_02110
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: A2005_02115
symbol: rpmC
gene_biotype: protein_coding
description:
  50S ribosomal protein L29; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL29 family.


ensembl_gene_id: A2005_02120
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: A2005_02125
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: A2005_02130
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: A2005_02135
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: A2005_02140
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: A2005_02145
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: A2005_02155
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: A2005_02160
symbol: rpsJ
gene_biotype: protein_coding
description:
  30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: A2005_02165
symbol: OGR31893.1
gene_biotype: protein_coding
description:
  Phosphate transport regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02170
symbol: OGR31894.1
gene_biotype: protein_coding
description:
  Inorganic phosphate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02220
symbol: hypA
gene_biotype: protein_coding
description:
  Hydrogenase maturation nickel metallochaperone HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.


ensembl_gene_id: A2005_02225
symbol: OGR31904.1
gene_biotype: protein_coding
description:
  Hydrogenase accessory protein HypB; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_02230
symbol: OGR31905.1
gene_biotype: protein_coding
description:
  Hydrogenase assembly protein HypC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02235
symbol: OGR31906.1
gene_biotype: protein_coding
description:
  Hydrogenase formation protein HypD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HypD family.


ensembl_gene_id: A2005_02240
symbol: OGR31907.1
gene_biotype: protein_coding
description:
  Hydrogenase expression/formation protein HypE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02260
symbol: OGR31911.1
gene_biotype: protein_coding
description:
  Osmotically inducible protein OsmC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02265
symbol: trmJ
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.


ensembl_gene_id: A2005_02285
symbol: OGR31915.1
gene_biotype: protein_coding
description:
  Dihydropyrimidine dehydrogenase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02295
symbol: OGR31917.1
gene_biotype: protein_coding
description:
  Bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02310
symbol: OGR31920.1
gene_biotype: protein_coding
description:
  Ribulose-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribulose-phosphate 3-epimerase family.


ensembl_gene_id: A2005_02325
symbol: OGR31923.1
gene_biotype: protein_coding
description:
  Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02345
symbol: A2005_02345
gene_biotype: protein_coding
description:
  Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_02350
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: A2005_02360
symbol: OGR32500.1
gene_biotype: protein_coding
description:
  Four helix bundle protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02370
symbol: A2005_02370
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: A2005_02375
symbol: pfkA-2
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: A2005_02445
symbol: OGR30817.1
gene_biotype: protein_coding
description:
  AbrB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02455
symbol: OGR30819.1
gene_biotype: protein_coding
description:
  Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02460
symbol: OGR30820.1
gene_biotype: protein_coding
description:
  Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02465
symbol: OGR30821.1
gene_biotype: protein_coding
description:
  Cobyrinic acid a,c-diamide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02475
symbol: OGR30823.1
gene_biotype: protein_coding
description:
  4-alpha-glucanotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02485
symbol: OGR30825.1
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02490
symbol: OGR30826.1
gene_biotype: protein_coding
description:
  TIGR00299 family protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_02500
symbol: OGR29724.1
gene_biotype: protein_coding
description:
  Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02505
symbol: OGR29725.1
gene_biotype: protein_coding
description:
  DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02520
symbol: OGR29728.1
gene_biotype: protein_coding
description:
  Glucoamylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02525
symbol: OGR29736.1
gene_biotype: protein_coding
description:
  Trehalose-6-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02570
symbol: A2005_02570
gene_biotype: protein_coding
description:
  Hypothetical protein; Subunit R is required for both nuclease and ATPase activities, but not for modification.


ensembl_gene_id: A2005_02575
symbol: OGR29261.1
gene_biotype: protein_coding
description:
  MmcQ-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02585
symbol: OGR29262.1
gene_biotype: protein_coding
description:
  EVE domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02595
symbol: OGR29270.1
gene_biotype: protein_coding
description:
  AMMECR1 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02605
symbol: OGR29265.1
gene_biotype: protein_coding
description:
  Penicillin-binding protein activator LpoB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02620
symbol: OGR29268.1
gene_biotype: protein_coding
description:
  GTP-binding protein TypA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02635
symbol: A2005_02635
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02645
symbol: OGR31992.1
gene_biotype: protein_coding
description:
  Threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde.


ensembl_gene_id: A2005_02650
symbol: OGR31993.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BI1 family.


ensembl_gene_id: A2005_02665
symbol: OGR33356.1
gene_biotype: protein_coding
description:
  Potassium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02670
symbol: OGR33357.1
gene_biotype: protein_coding
description:
  Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02680
symbol: OGR33359.1
gene_biotype: protein_coding
description:
  Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.


ensembl_gene_id: A2005_02700
symbol: OGR29019.1
gene_biotype: protein_coding
description:
  AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02710
symbol: OGR29021.1
gene_biotype: protein_coding
description:
  NgoFVII family restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02715
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: A2005_02720
symbol: kdpA
gene_biotype: protein_coding
description:
  Potassium-transporting ATPase subunit KdpA; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane.


ensembl_gene_id: A2005_02735
symbol: A2005_02735
gene_biotype: protein_coding
description:
  Chemotaxis protein CheA; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_02740
symbol: OGR31357.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02745
symbol: OGR31349.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.


ensembl_gene_id: A2005_02775
symbol: OGR31358.1
gene_biotype: protein_coding
description:
  ATP-dependent helicase HrpB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02780
symbol: OGR31355.1
gene_biotype: protein_coding
description:
  Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02785
symbol: OGR31356.1
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CbiM; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02800
symbol: A2005_02800
gene_biotype: protein_coding
description:
  NAD-dependent malic enzyme 1; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_02805
symbol: OGR33222.1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; Rotamase C; accelerates isomerization of the peptidyl prolyl bond; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02815
symbol: OGR33224.1
gene_biotype: protein_coding
description:
  2-oxoglutarate dehydrogenase E1 component; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02820
symbol: OGR33225.1
gene_biotype: protein_coding
description:
  Dihydrolipoamide succinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02855
symbol: gpmI
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase (2,3-diphosphoglycerate-independent); Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: A2005_02870
symbol: OGR34061.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: A2005_02885
symbol: OGR30377.1
gene_biotype: protein_coding
description:
  Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.


ensembl_gene_id: A2005_02890
symbol: OGR30378.1
gene_biotype: protein_coding
description:
  B12-binding domain-containing radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02915
symbol: OGR30383.1
gene_biotype: protein_coding
description:
  Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02920
symbol: OGR30384.1
gene_biotype: protein_coding
description:
  Aldehyde:ferredoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02930
symbol: OGR30386.1
gene_biotype: protein_coding
description:
  Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02935
symbol: OGR30387.1
gene_biotype: protein_coding
description:
  Aminotransferase class I and II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02940
symbol: OGR30388.1
gene_biotype: protein_coding
description:
  Phosphohydrolase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_02965
symbol: A2005_02965
gene_biotype: protein_coding
description:
  Alpha/beta hydrolase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_02975
symbol: OGR32591.1
gene_biotype: protein_coding
description:
  Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: A2005_03005
symbol: OGR32597.1
gene_biotype: protein_coding
description:
  RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03025
symbol: A2005_03025
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03030
symbol: OGR32599.1
gene_biotype: protein_coding
description:
  acyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03055
symbol: A2005_03055
gene_biotype: protein_coding
description:
  aminoacyl-tRNA deacylase; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03070
symbol: bioW
gene_biotype: protein_coding
description:
  6-carboxyhexanoate--CoA ligase; Catalyzes the transformation of pimelate into pimeloyl-CoA with concomitant hydrolysis of ATP to AMP.


ensembl_gene_id: A2005_03075
symbol: OGR34001.1
gene_biotype: protein_coding
description:
  8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.


ensembl_gene_id: A2005_03090
symbol: OGR34031.1
gene_biotype: protein_coding
description:
  SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03105
symbol: OGR34006.1
gene_biotype: protein_coding
description:
  Inorganic diphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03110
symbol: fbp
gene_biotype: protein_coding
description:
  Fructose-bisphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FBPase class 1 family.


ensembl_gene_id: A2005_03115
symbol: OGR34008.1
gene_biotype: protein_coding
description:
  Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03120
symbol: OGR34009.1
gene_biotype: protein_coding
description:
  2-oxoglutarate ferredoxin oxidoreductase subunit gamma; Catalyzes the ferredoxin-dependent oxidative decarboxylation 2-oxoglutarate forming succinyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03125
symbol: OGR34010.1
gene_biotype: protein_coding
description:
  2-oxoacid:ferredoxin oxidoreductase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03130
symbol: OGR34011.1
gene_biotype: protein_coding
description:
  2-oxoglutarate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03135
symbol: OGR34012.1
gene_biotype: protein_coding
description:
  Tungsten formylmethanofuran dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03140
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.


ensembl_gene_id: A2005_03145
symbol: OGR34014.1
gene_biotype: protein_coding
description:
  Isocitrate dehydrogenase (NADP(+)); Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the monomeric-type IDH family.


ensembl_gene_id: A2005_03150
symbol: aspS
gene_biotype: protein_coding
description:
  aspartate--tRNA ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: A2005_03155
symbol: hisS
gene_biotype: protein_coding
description:
  histidine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03175
symbol: OGR34019.1
gene_biotype: protein_coding
description:
  DNA internalization-related competence protein ComEC/Rec2; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_03195
symbol: cheB
gene_biotype: protein_coding
description:
  Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: A2005_03200
symbol: OGR34024.1
gene_biotype: protein_coding
description:
  Bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aconitase/IPM isomerase family.


ensembl_gene_id: A2005_03250
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: A2005_03255
symbol: glk
gene_biotype: protein_coding
description:
  Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial glucokinase family.


ensembl_gene_id: A2005_03325
symbol: OGR31732.1
gene_biotype: protein_coding
description:
  Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03355
symbol: OGR31738.1
gene_biotype: protein_coding
description:
  Asparagine synthase (glutamine-hydrolyzing); Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_03395
symbol: A2005_03395
gene_biotype: protein_coding
description:
  Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_03415
symbol: OGR32196.1
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide diphosphorylase (carboxylating); Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NadC/ModD family.


ensembl_gene_id: A2005_03420
symbol: birA
gene_biotype: protein_coding
description:
  biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.


ensembl_gene_id: A2005_03425
symbol: coaX
gene_biotype: protein_coding
description:
  Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: A2005_03430
symbol: OGR32199.1
gene_biotype: protein_coding
description:
  Translation elongation factor G; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03450
symbol: OGR32203.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor sulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03455
symbol: OGR32204.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03465
symbol: OGR32206.1
gene_biotype: protein_coding
description:
  Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome c-552 family.


ensembl_gene_id: A2005_03475
symbol: OGR32208.1
gene_biotype: protein_coding
description:
  AMP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03480
symbol: OGR32209.1
gene_biotype: protein_coding
description:
  Peptidase M24; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03485
symbol: OGR32210.1
gene_biotype: protein_coding
description:
  NAD-dependent deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03495
symbol: OGR33623.1
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03525
symbol: OGR33628.1
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase; Subunit R is required for both nuclease and ATPase activities, but not for modification.


ensembl_gene_id: A2005_03540
symbol: OGR33631.1
gene_biotype: protein_coding
description:
  DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03545
symbol: OGR33632.1
gene_biotype: protein_coding
description:
  Alkylphosphonate utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03550
symbol: OGR33638.1
gene_biotype: protein_coding
description:
  Modification methylase SalI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03555
symbol: OGR33637.1
gene_biotype: protein_coding
description:
  Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03560
symbol: OGR33633.1
gene_biotype: protein_coding
description:
  XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03600
symbol: OGR31469.1
gene_biotype: protein_coding
description:
  Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: A2005_03615
symbol: OGR31472.1
gene_biotype: protein_coding
description:
  Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03640
symbol: OGR31477.1
gene_biotype: protein_coding
description:
  MBL fold metallo-hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03650
symbol: OGR31479.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.


ensembl_gene_id: A2005_03655
symbol: OGR31480.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: A2005_03660
symbol: OGR31483.1
gene_biotype: protein_coding
description:
  tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03665
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA 2-thiouridine(34) synthase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: A2005_03670
symbol: OGR31482.1
gene_biotype: protein_coding
description:
  Fe-S cluster assembly scaffold protein NifU; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03680
symbol: OGR33869.1
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphatidylserine decarboxylase family.


ensembl_gene_id: A2005_03710
symbol: OGR33875.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: A2005_03715
symbol: OGR33609.1
gene_biotype: protein_coding
description:
  23S rRNA (guanine(2445)-N(2))/(guanine(2069)-N(7))- methyltransferase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family.


ensembl_gene_id: A2005_03720
symbol: OGR33610.1
gene_biotype: protein_coding
description:
  Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03725
symbol: OGR33611.1
gene_biotype: protein_coding
description:
  RNA-binding transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03730
symbol: OGR33612.1
gene_biotype: protein_coding
description:
  Universal stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03760
symbol: mtnP
gene_biotype: protein_coding
description:
  Methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily.


ensembl_gene_id: A2005_03770
symbol: OGR30147.1
gene_biotype: protein_coding
description:
  Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03780
symbol: OGR30149.1
gene_biotype: protein_coding
description:
  HD family phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03790
symbol: OGR30151.1
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: A2005_03800
symbol: OGR30159.1
gene_biotype: protein_coding
description:
  uracil-DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03835
symbol: OGR33812.1
gene_biotype: protein_coding
description:
  lysine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03845
symbol: lolD
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.


ensembl_gene_id: A2005_03850
symbol: bamA
gene_biotype: protein_coding
description:
  Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: A2005_03860
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: A2005_03865
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: A2005_03870
symbol: lpxA
gene_biotype: protein_coding
description:
  acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: A2005_03875
symbol: lpxB
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: A2005_03880
symbol: OGR33819.1
gene_biotype: protein_coding
description:
  Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. Belongs to the ABC transporter superfamily. Lipid exporter (TC 3.A.1.106) family.


ensembl_gene_id: A2005_03890
symbol: OGR33821.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: A2005_03895
symbol: lpxK
gene_biotype: protein_coding
description:
  Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: A2005_03945
symbol: OGR33830.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03950
symbol: OGR33831.1
gene_biotype: protein_coding
description:
  CDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_03955
symbol: OGR33832.1
gene_biotype: protein_coding
description:
  Lipopolysaccharide biosynthesis protein RfbH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: A2005_03960
symbol: OGR33842.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.


ensembl_gene_id: A2005_03965
symbol: OGR33833.1
gene_biotype: protein_coding
description:
  Acetaldehyde dehydrogenase (acetylating); Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.


ensembl_gene_id: A2005_03970
symbol: OGR33834.1
gene_biotype: protein_coding
description:
  4-hydroxy-2-oxovalerate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family.


ensembl_gene_id: A2005_04000
symbol: sucC
gene_biotype: protein_coding
description:
  succinate--CoA ligase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: A2005_04005
symbol: sucC-2
gene_biotype: protein_coding
description:
  succinate--CoA ligase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: A2005_04020
symbol: tal
gene_biotype: protein_coding
description:
  Fructose-6-phosphate aldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: A2005_04030
symbol: OGR29340.1
gene_biotype: protein_coding
description:
  2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_04045
symbol: A2005_04045
gene_biotype: protein_coding
description:
  Rod shape-determining protein RodA; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_04060
symbol: OGR32697.1
gene_biotype: protein_coding
description:
  Rod shape-determining protein; Functions in MreBCD complex in some organisms; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_04070
symbol: purC
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazolesuccinocarboxamide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SAICAR synthetase family.


ensembl_gene_id: A2005_04100
symbol: OGR32703.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: A2005_04105
symbol: OGR32704.1
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase A; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: A2005_04130
symbol: OGR32709.1
gene_biotype: protein_coding
description:
  Type I citrate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the citrate synthase family.


ensembl_gene_id: A2005_04135
symbol: OGR32710.1
gene_biotype: protein_coding
description:
  tRNA dihydrouridine synthase DusB; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: A2005_04145
symbol: OGR32712.1
gene_biotype: protein_coding
description:
  DNA-binding response regulator in two-component regulatory system with ZraS; response regulator/sigma54 interaction protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_04155
symbol: OGR32714.1
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: A2005_04170
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: A2005_04180
symbol: pal
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: A2005_04215
symbol: OGR32726.1
gene_biotype: protein_coding
description:
  Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_04225
symbol: OGR33882.1
gene_biotype: protein_coding
description:
  Flotillin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_04235
symbol: cheD
gene_biotype: protein_coding
description:
  Hypothetical protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: A2005_04245
symbol: mntP
gene_biotype: protein_coding
description:
  Hypothetical protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.


ensembl_gene_id: A2005_04255
symbol: OGR33888.1
gene_biotype: protein_coding
description:
  enoyl-ACP reductase; Catalyzes a key regulatory step in fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_04260
symbol: hflX
gene_biotype: protein_coding
description:
  GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.


ensembl_gene_id: A2005_04290
symbol: rpsO
gene_biotype: protein_coding
description:
  Hypothetical protein; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: A2005_04295
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: A2005_04300
symbol: dut
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: A2005_04305
symbol: OGR32625.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0250 family.


ensembl_gene_id: A2005_04310
symbol: OGR32626.1
gene_biotype: protein_coding
description:
  threonylcarbamoyl-AMP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SUA5 family.


ensembl_gene_id: A2005_04335
symbol: tgt
gene_biotype: protein_coding
description:
  tRNA guanosine(34) transglycosylase Tgt; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose t [...]


ensembl_gene_id: A2005_04345
symbol: sdhA
gene_biotype: protein_coding
description:
  Part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_04350
symbol: OGR32644.1
gene_biotype: protein_coding
description:
  Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_04370
symbol: eno
gene_biotype: protein_coding
description:
  Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: A2005_04375
symbol: OGR32638.1
gene_biotype: protein_coding
description:
  Phosphate starvation-inducible protein PhoH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_04380
symbol: OGR32639.1
gene_biotype: protein_coding
description:
  Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_04385
symbol: ybeY
gene_biotype: protein_coding
description:
  rRNA maturation RNase YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: A2005_04390
symbol: OGR32641.1
gene_biotype: protein_coding
description:
  Diacylglycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_04400
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: A2005_04410
symbol: OGR32219.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: A2005_04420
symbol: OGR32221.1
gene_biotype: protein_coding
description:
  Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_04440
symbol: glnS
gene_biotype: protein_coding
description:
  glutamine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_04445
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: A2005_04450
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: A2005_04455
symbol: OGR32225.1
gene_biotype: protein_coding
description:
  CarD family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_04465
symbol: OGR32227.1
gene_biotype: protein_coding
description:
  Pyruvate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pyruvate kinase family.


ensembl_gene_id: A2005_04470
symbol: queC
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine synthase QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.


ensembl_gene_id: A2005_04495
symbol: moaA
gene_biotype: protein_coding
description:
  Cyclic pyranopterin phosphate synthase MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: A2005_04505
symbol: OGR32234.1
gene_biotype: protein_coding
description:
  Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_04510
symbol: OGR32235.1
gene_biotype: protein_coding
description:
  Glycolate oxidase subunit GlcD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_04535
symbol: OGR31525.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CvfB family.


ensembl_gene_id: A2005_04560
symbol: tsaD
gene_biotype: protein_coding
description:
  Phosphate starvation-inducible protein PhoH; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: A2005_04570
symbol: rsmA
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: A2005_04590
symbol: panB
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: A2005_04605
symbol: A2005_04605
gene_biotype: protein_coding
description:
  Cell division protein FtsH; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: A2005_04610
symbol: dacA
gene_biotype: protein_coding
description:
  TIGR00159 family protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: A2005_04615
symbol: OGR31783.1
gene_biotype: protein_coding
description:
  YbbR domain pair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_04620
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: A2005_04625
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: A2005_04630
symbol: acpS
gene_biotype: protein_coding
description:
  Holo-[acyl-carrier-protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: A2005_04635
symbol: nnrD
gene_biotype: protein_coding
description:
  Hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epi [...]


ensembl_gene_id: A2005_04645
symbol: OGR31789.1
gene_biotype: protein_coding
description:
  tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_04650
symbol: OGR31790.1
gene_biotype: protein_coding
description:
  Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_04655
symbol: OGR31791.1
gene_biotype: protein_coding
description:
  Aspartate kinase; Catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family.


ensembl_gene_id: A2005_04660
symbol: OGR31792.1
gene_biotype: protein_coding
description:
  Citramalate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the alpha-IPM synthase/homocitrate synthase family.


ensembl_gene_id: A2005_04675
symbol: OGR31795.1
gene_biotype: protein_coding
description:
  (4Fe-4S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_04690
symbol: xerC
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: A2005_04710
symbol: OGR31802.1
gene_biotype: protein_coding
description:
  Multidrug efflux RND transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_04720
symbol: OGR31804.1
gene_biotype: protein_coding
description:
  TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_04725
symbol: OGR31805.1
gene_biotype: protein_coding
description:
  Peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_04745
symbol: A2005_04745
gene_biotype: protein_coding
description:
  Glutamine-synthetase adenylyltransferase; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_04750
symbol: ttcA
gene_biotype: protein_coding
description:
  tRNA 2-thiocytidine(32) synthetase TtcA; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.


ensembl_gene_id: A2005_04755
symbol: OGR33543.1
gene_biotype: protein_coding
description:
  Quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_04760
symbol: OGR33544.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UbiD family.


ensembl_gene_id: A2005_04765
symbol: guaC
gene_biotype: protein_coding
description:
  GMP reductase; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides.


ensembl_gene_id: A2005_04770
symbol: OGR33546.1
gene_biotype: protein_coding
description:
  Cell filamentation protein Fic; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_04780
symbol: OGR31495.1
gene_biotype: protein_coding
description:
  CoA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_04790
symbol: gluQ
gene_biotype: protein_coding
description:
  tRNA glutamyl-Q(34) synthetase GluQRS; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily.


ensembl_gene_id: A2005_04795
symbol: OGR31511.1
gene_biotype: protein_coding
description:
  Rrf2 family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_04810
symbol: cysD
gene_biotype: protein_coding
description:
  Sulfate adenylyltransferase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_04815
symbol: cysN
gene_biotype: protein_coding
description:
  Bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.


ensembl_gene_id: A2005_04820
symbol: OGR31502.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: A2005_04825
symbol: OGR31503.1
gene_biotype: protein_coding
description:
  Cysteine synthase A; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family.


ensembl_gene_id: A2005_04835
symbol: OGR31505.1
gene_biotype: protein_coding
description:
  2-pyrone-4,6-dicarboxylate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_04840
symbol: OGR31506.1
gene_biotype: protein_coding
description:
  Transglutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_04870
symbol: A2005_04870
gene_biotype: protein_coding
description:
  Aldehyde oxidase; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_04875
symbol: OGR32425.1
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_04880
symbol: OGR32426.1
gene_biotype: protein_coding
description:
  AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_04920
symbol: OGR29293.1
gene_biotype: protein_coding
description:
  HAMP domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_04930
symbol: cpoB
gene_biotype: protein_coding
description:
  Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.


ensembl_gene_id: A2005_04935
symbol: pal-2
gene_biotype: protein_coding
description:
  Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: A2005_04940
symbol: tolB
gene_biotype: protein_coding
description:
  Tol-Pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: A2005_04960
symbol: A2005_04960
gene_biotype: protein_coding
description:
  Phosphohydrolase; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_04975
symbol: fadE
gene_biotype: protein_coding
description:
  acyl-CoA dehydrogenase; Functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_04990
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: A2005_04995
symbol: OGR30997.1
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibF; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribF family.


ensembl_gene_id: A2005_05000
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: A2005_05005
symbol: OGR30999.1
gene_biotype: protein_coding
description:
  Type IV-A pilus assembly ATPase PilB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05015
symbol: OGR31000.1
gene_biotype: protein_coding
description:
  Pilus assembly protein PilC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05030
symbol: OGR31002.1
gene_biotype: protein_coding
description:
  Pilus assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05055
symbol: OGR32885.1
gene_biotype: protein_coding
description:
  Histidine kinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_05065
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: A2005_05110
symbol: OGR32903.1
gene_biotype: protein_coding
description:
  4-hydroxybenzoyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05140
symbol: OGR32901.1
gene_biotype: protein_coding
description:
  5-methyltetrahydrofolate--homocysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05160
symbol: A2005_05160
gene_biotype: protein_coding
description:
  NAD-dependent malic enzyme 1; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: A2005_05170
symbol: OGR31108.1
gene_biotype: protein_coding
description:
  TIGR00268 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05180
symbol: OGR31110.1
gene_biotype: protein_coding
description:
  Mechanosensitive ion channel protein MscS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05205
symbol: OGR31115.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: A2005_05215
symbol: mobA
gene_biotype: protein_coding
description:
  Hypothetical protein; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.


ensembl_gene_id: A2005_05220
symbol: OGR31118.1
gene_biotype: protein_coding
description:
  Molybdopterin-guanine dinucleotide biosynthesis protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05225
symbol: OGR31119.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: A2005_05245
symbol: A2005_05245
gene_biotype: protein_coding
description:
  Deoxyribonuclease; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05275
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: A2005_05280
symbol: hisZ
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase regulatory subunit; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.


ensembl_gene_id: A2005_05285
symbol: OGR31124.1
gene_biotype: protein_coding
description:
  Phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: A2005_05290
symbol: OGR31125.1
gene_biotype: protein_coding
description:
  Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05300
symbol: OGR31127.1
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase PcrA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05305
symbol: OGR31128.1
gene_biotype: protein_coding
description:
  Chloride channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05330
symbol: OGR31133.1
gene_biotype: protein_coding
description:
  Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05375
symbol: OGR30731.1
gene_biotype: protein_coding
description:
  Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05385
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: A2005_05400
symbol: dksA
gene_biotype: protein_coding
description:
  RNA polymerase-binding protein DksA; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.


ensembl_gene_id: A2005_05410
symbol: moaC
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: A2005_05455
symbol: OGR29926.1
gene_biotype: protein_coding
description:
  Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.


ensembl_gene_id: A2005_05485
symbol: OGR31620.1
gene_biotype: protein_coding
description:
  Addiction module toxin RelE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05520
symbol: OGR31627.1
gene_biotype: protein_coding
description:
  Plasmid maintenance system killer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05525
symbol: OGR31689.1
gene_biotype: protein_coding
description:
  isoleucine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05540
symbol: OGR31692.1
gene_biotype: protein_coding
description:
  Exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05560
symbol: OGR33904.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter permease subunit PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: A2005_05565
symbol: OGR33905.1
gene_biotype: protein_coding
description:
  Protein sphX; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05575
symbol: A2005_05575
gene_biotype: protein_coding
description:
  Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05585
symbol: A2005_05585
gene_biotype: protein_coding
description:
  Tellurium resistance protein TerC; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05590
symbol: htpX
gene_biotype: protein_coding
description:
  Protease HtpX; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M48B family.


ensembl_gene_id: A2005_05595
symbol: OGR33909.1
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase Rep; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05610
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: A2005_05620
symbol: OGR33914.1
gene_biotype: protein_coding
description:
  ADP-ribose pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05630
symbol: OGR33916.1
gene_biotype: protein_coding
description:
  DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05640
symbol: A2005_05640
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyltransferase subunit; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05660
symbol: OGR33563.1
gene_biotype: protein_coding
description:
  methylmalonyl-CoA epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05680
symbol: OGR32412.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the peptidase S41A family.


ensembl_gene_id: A2005_05685
symbol: pdxA
gene_biotype: protein_coding
description:
  4-hydroxythreonine-4-phosphate dehydrogenase PdxA; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).


ensembl_gene_id: A2005_05695
symbol: OGR32415.1
gene_biotype: protein_coding
description:
  Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05700
symbol: kdpC
gene_biotype: protein_coding
description:
  Potassium-transporting ATPase subunit C; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex.


ensembl_gene_id: A2005_05705
symbol: OGR31248.1
gene_biotype: protein_coding
description:
  Polya polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: A2005_05710
symbol: OGR31249.1
gene_biotype: protein_coding
description:
  Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05715
symbol: OGR31250.1
gene_biotype: protein_coding
description:
  Chromosome segregation protein ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: A2005_05720
symbol: OGR31251.1
gene_biotype: protein_coding
description:
  SMC-Scp complex subunit ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: A2005_05725
symbol: OGR31252.1
gene_biotype: protein_coding
description:
  Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: A2005_05740
symbol: mutL
gene_biotype: protein_coding
description:
  Hypothetical protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: A2005_05745
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: A2005_05750
symbol: hfq
gene_biotype: protein_coding
description:
  RNA chaperone Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: A2005_05755
symbol: OGR31258.1
gene_biotype: protein_coding
description:
  FeS-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05760
symbol: OGR31259.1
gene_biotype: protein_coding
description:
  Lactate utilization protein C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05770
symbol: OGR31261.1
gene_biotype: protein_coding
description:
  Murein hydrolase regulator LrgA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05775
symbol: OGR31262.1
gene_biotype: protein_coding
description:
  CidB/LrgB family autolysis modulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05820
symbol: aroK
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: A2005_05825
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: A2005_05840
symbol: aroQ
gene_biotype: protein_coding
description:
  Type II 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: A2005_05845
symbol: OGR32986.1
gene_biotype: protein_coding
description:
  Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05850
symbol: OGR32987.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: A2005_05855
symbol: OGR32988.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: A2005_05875
symbol: mqnA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: A2005_05895
symbol: A2005_05895
gene_biotype: protein_coding
description:
  Hypothetical protein; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05905
symbol: OGR32995.1
gene_biotype: protein_coding
description:
  Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05910
symbol: OGR32996.1
gene_biotype: protein_coding
description:
  Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.


ensembl_gene_id: A2005_05920
symbol: OGR32998.1
gene_biotype: protein_coding
description:
  4-carboxymuconolactone decarboxylase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: A2005_05940
symbol: OGR33001.1
gene_biotype: protein_coding
description:
  LPS export ABC transporter permease LptG; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_05945
symbol: OGR33002.1
gene_biotype: protein_coding
description:
  LPS export ABC transporter permease LptF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05950
symbol: rhlB
gene_biotype: protein_coding
description:
  RNA helicase; DEAD-box RNA helicase involved in RNA degradation. Has RNA- dependent ATPase activity and unwinds double-stranded RNA.


ensembl_gene_id: A2005_05960
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: A2005_05970
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: A2005_05975
symbol: OGR30119.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: A2005_05980
symbol: lptD
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.


ensembl_gene_id: A2005_05990
symbol: OGR30122.1
gene_biotype: protein_coding
description:
  UDP-glucose 6-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_05995
symbol: OGR30125.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: A2005_06000
symbol: argS
gene_biotype: protein_coding
description:
  arginine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_06025
symbol: OGR29062.1
gene_biotype: protein_coding
description:
  tRNA 2-selenouridine(34) synthase MnmH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SelU family.


ensembl_gene_id: A2005_06045
symbol: OGR29066.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids.


ensembl_gene_id: A2005_06080
symbol: metXA
gene_biotype: protein_coding
description:
  Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.


ensembl_gene_id: A2005_06095
symbol: OGR29076.1
gene_biotype: protein_coding
description:
  Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: A2005_06100
symbol: OGR29077.1
gene_biotype: protein_coding
description:
  YggS family pyridoxal phosphate enzyme; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: A2005_06180
symbol: OGR29092.1
gene_biotype: protein_coding
description:
  Heterodisulfide reductase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_06190
symbol: A2005_06190
gene_biotype: protein_coding
description:
  tRNA pseudouridine(38-40) synthase TruA; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_06220
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: A2005_06225
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp endopeptidase, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: A2005_06230
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: A2005_06240
symbol: OGR29512.1
gene_biotype: protein_coding
description:
  DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: A2005_06280
symbol: OGR29517.1
gene_biotype: protein_coding
description:
  Type II secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_06285
symbol: OGR29518.1
gene_biotype: protein_coding
description:
  Pilus assembly protein PilB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_06315
symbol: OGR29524.1
gene_biotype: protein_coding
description:
  General secretion pathway protein GspG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_06325
symbol: ftsE
gene_biotype: protein_coding
description:
  Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: A2005_06330
symbol: OGR29527.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: A2005_06340
symbol: OGR29529.1
gene_biotype: protein_coding
description:
  Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family.


ensembl_gene_id: A2005_06355
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: A2005_06365
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: A2005_06370
symbol: OGR29534.1
gene_biotype: protein_coding
description:
  Polyprenyl synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: A2005_06375
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: A2005_06435
symbol: A2005_06435
gene_biotype: protein_coding
description:
  Nitrogen fixation protein NifB; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_06440
symbol: OGR31076.1
gene_biotype: protein_coding
description:
  Molybdate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_06445
symbol: OGR31077.1
gene_biotype: protein_coding
description:
  Molybdenum ABC transporter permease subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: A2005_06450
symbol: OGR31078.1
gene_biotype: protein_coding
description:
  Molybdenum ABC transporter ATP-binding protein; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family.


ensembl_gene_id: A2005_06470
symbol: OGR31082.1
gene_biotype: protein_coding
description:
  ADP-ribosyl-[dinitrogen reductase] hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_06475
symbol: OGR31083.1
gene_biotype: protein_coding
description:
  N-acyl homoserine lactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_06485
symbol: OGR31085.1
gene_biotype: protein_coding
description:
  Homocitrate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the alpha-IPM synthase/homocitrate synthase family.


ensembl_gene_id: A2005_06500
symbol: A2005_06500
gene_biotype: protein_coding
description:
  RNA helicase; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_06505
symbol: OGR31773.1
gene_biotype: protein_coding
description:
  B12-binding domain/radical SAM domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_06515
symbol: srkA
gene_biotype: protein_coding
description:
  Stress response serine/threonine protein kinase YihE; A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response.


ensembl_gene_id: A2005_06520
symbol: OGR31775.1
gene_biotype: protein_coding
description:
  Spermidine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_06535
symbol: OGR32316.1
gene_biotype: protein_coding
description:
  Recombinase RecF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_06560
symbol: OGR32321.1
gene_biotype: protein_coding
description:
  Arsenical-resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_06565
symbol: OGR32336.1
gene_biotype: protein_coding
description:
  Arsenate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: A2005_06605
symbol: OGR32329.1
gene_biotype: protein_coding
description:
  Hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_06645
symbol: OGR32335.1
gene_biotype: protein_coding
description:
  C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_06650
symbol: OGR32339.1
gene_biotype: protein_coding
description:
  C4-dicarboxylate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_06660
symbol: A2005_06660
gene_biotype: protein_coding
description:
  Potassium-transporting ATPase subunit B; Metagenomic; derived from metagenome: subsurface metagenome.


ensembl_gene_id: A2005_06695
symbol: OGR28992.1
gene_biotype: protein_coding
description:
  Addiction module antitoxin RelB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_06700
symbol: pcnB
gene_biotype: protein_coding
description:
  poly(A) polymerase; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: A2005_06745
symbol: A2005_06745
gene_biotype: protein_coding
description:
  NADH dehydrogenase; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_06750
symbol: nuoD-2
gene_biotype: protein_coding
description:
  NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: A2005_06755
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: A2005_06760
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: A2005_06780
symbol: OGR28976.1
gene_biotype: protein_coding
description:
  acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_06785
symbol: OGR28977.1
gene_biotype: protein_coding
description:
  Crotonase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: A2005_06790
symbol: hemL
gene_biotype: protein_coding
description:
  Glutamate-1-semialdehyde-2,1-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_06800
symbol: A2005_06800
gene_biotype: protein_coding
description:
  Cation acetate symporter; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_06810
symbol: OGR29204.1
gene_biotype: protein_coding
description:
  IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_06820
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: A2005_06845
symbol: OGR29203.1
gene_biotype: protein_coding
description:
  Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: A2005_06915
symbol: A2005_06915
gene_biotype: protein_coding
description:
  Hydrolase; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_06925
symbol: thiC
gene_biotype: protein_coding
description:
  Phosphomethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.


ensembl_gene_id: A2005_06930
symbol: thiE
gene_biotype: protein_coding
description:
  Phosphomethylpyrimidine kinase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: A2005_06940
symbol: smc
gene_biotype: protein_coding
description:
  Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: A2005_06945
symbol: OGR31319.1
gene_biotype: protein_coding
description:
  GTPase-activating protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_06950
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.


ensembl_gene_id: A2005_06965
symbol: OGR31314.1
gene_biotype: protein_coding
description:
  5-formyltetrahydrofolate cyclo-ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.


ensembl_gene_id: A2005_06975
symbol: OGR31316.1
gene_biotype: protein_coding
description:
  Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_06980
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.


ensembl_gene_id: A2005_06990
symbol: OGR29551.1
gene_biotype: protein_coding
description:
  Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M16 family.


ensembl_gene_id: A2005_07035
symbol: OGR29560.1
gene_biotype: protein_coding
description:
  Plasmid maintenance protein CcdB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_07045
symbol: A2005_07045
gene_biotype: protein_coding
description:
  Anthranilate synthase component I; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_07050
symbol: OGR32088.1
gene_biotype: protein_coding
description:
  Twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_07080
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase (NAD(+)) LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: A2005_07120
symbol: OGR32100.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: A2005_07130
symbol: OGR32102.1
gene_biotype: protein_coding
description:
  Acylphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_07165
symbol: A2005_07165
gene_biotype: protein_coding
description:
  Heat-inducible transcriptional repressor HrcA; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: A2005_07170
symbol: OGR31702.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: A2005_07175
symbol: OGR31703.1
gene_biotype: protein_coding
description:
  Carbon-nitrogen hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_07180
symbol: OGR31704.1
gene_biotype: protein_coding
description:
  Type I restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_07190
symbol: A2005_07190
gene_biotype: protein_coding
description:
  Four helix bundle protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_07200
symbol: OGR31707.1
gene_biotype: protein_coding
description:
  Restriction endonuclease subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_07210
symbol: OGR31709.1
gene_biotype: protein_coding
description:
  Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_07225
symbol: grpE
gene_biotype: protein_coding
description:
  Nucleotide exchange factor GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds [...]


ensembl_gene_id: A2005_07235
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: A2005_07245
symbol: OGR29321.1
gene_biotype: protein_coding
description:
  3-deoxy-7-phosphoheptulonate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_07275
symbol: A2005_07275
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_07280
symbol: OGR33132.1
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: A2005_07285
symbol: OGR33133.1
gene_biotype: protein_coding
description:
  Nicotinamidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_07290
symbol: OGR33134.1
gene_biotype: protein_coding
description:
  MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_07295
symbol: OGR33136.1
gene_biotype: protein_coding
description:
  Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_07315
symbol: OGR31392.1
gene_biotype: protein_coding
description:
  Pyruvate, phosphate dikinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: A2005_07335
symbol: purE
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein ResB; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: A2005_07345
symbol: purD
gene_biotype: protein_coding
description:
  Phosphoribosylamine--glycine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GARS family.


ensembl_gene_id: A2005_07355
symbol: purH
gene_biotype: protein_coding
description:
  Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_07365
symbol: OGR32813.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: A2005_07375
symbol: ubiE
gene_biotype: protein_coding
description:
  Bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).


ensembl_gene_id: A2005_07380
symbol: OGR32816.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family.


ensembl_gene_id: A2005_07390
symbol: OGR32822.1
gene_biotype: protein_coding
description:
  Cation acetate symporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: A2005_07400
symbol: ppnP
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.


ensembl_gene_id: A2005_07405
symbol: OGR32819.1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_07420
symbol: A2005_07420
gene_biotype: protein_coding
description:
  Transposase; Frameshifted; incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_07430
symbol: OGR29430.1
gene_biotype: protein_coding
description:
  Transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family.


ensembl_gene_id: A2005_07445
symbol: nhaA
gene_biotype: protein_coding
description:
  Na(+)/H(+) antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.


ensembl_gene_id: A2005_07490
symbol: OGR33377.1
gene_biotype: protein_coding
description:
  Mannose-1-phosphate guanyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_07495
symbol: OGR33378.1
gene_biotype: protein_coding
description:
  Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_07520
symbol: OGR33381.1
gene_biotype: protein_coding
description:
  NTP pyrophosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_07525
symbol: OGR33382.1
gene_biotype: protein_coding
description:
  Carbamoyltransferase HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide.


ensembl_gene_id: A2005_07545
symbol: OGR33409.1
gene_biotype: protein_coding
description:
  Octaprenyl diphosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: A2005_07555
symbol: OGR33387.1
gene_biotype: protein_coding
description:
  Cytochrome C oxidase Cbb3; CcoN; FixN; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: A2005_07560
symbol: OGR33388.1
gene_biotype: protein_coding
description:
  Cytochrome C oxidase Cbb3; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_07580
symbol: OGR33392.1
gene_biotype: protein_coding
description:
  Copper-translocating P-type ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_07585
symbol: OGR33393.1
gene_biotype: protein_coding
description:
  Cytochrome oxidase maturation protein, cbb3-type; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_07625
symbol: OGR33400.1
gene_biotype: protein_coding
description:
  Lysine 2,3-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_07635
symbol: OGR33402.1
gene_biotype: protein_coding
description:
  Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the inositol monophosphatase superfamily.


ensembl_gene_id: A2005_07650
symbol: OGR33405.1
gene_biotype: protein_coding
description:
  Ammonium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_07655
symbol: OGR33406.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_07670
symbol: A2005_07670
gene_biotype: protein_coding
description:
  GntR family transcriptional regulator; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_07675
symbol: OGR32875.1
gene_biotype: protein_coding
description:
  Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_07720
symbol: OGR31456.1
gene_biotype: protein_coding
description:
  ABC transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_07755
symbol: coaD
gene_biotype: protein_coding
description:
  Pantetheine-phosphate adenylyltransferase; Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_07760
symbol: OGR30536.1
gene_biotype: protein_coding
description:
  Deoxyguanosinetriphosphate triphosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the dGTPase family. Type 2 subfamily.


ensembl_gene_id: A2005_07770
symbol: bioA
gene_biotype: protein_coding
description:
  Adenosylmethionine--8-amino-7-oxononanoate transaminase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.


ensembl_gene_id: A2005_07775
symbol: bioD
gene_biotype: protein_coding
description:
  Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: A2005_07780
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase BioB; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: A2005_07805
symbol: OGR30545.1
gene_biotype: protein_coding
description:
  Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_07825
symbol: OGR30549.1
gene_biotype: protein_coding
description:
  Indolepyruvate ferredoxin oxidoreductase subunit alpha; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.


ensembl_gene_id: A2005_07830
symbol: OGR30550.1
gene_biotype: protein_coding
description:
  Indolepyruvate oxidoreductase subunit beta; Involved in the incorporation of exogenous aryl acids in the biosynthesis of aromatic amino acids: catalysis of the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_07835
symbol: OGR30551.1
gene_biotype: protein_coding
description:
  phenylacetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_07845
symbol: A2005_07845
gene_biotype: protein_coding
description:
  MBL fold metallo-hydrolase; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_07855
symbol: pgk
gene_biotype: protein_coding
description:
  Phosphoglycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphoglycerate kinase family.


ensembl_gene_id: A2005_07860
symbol: tpiA
gene_biotype: protein_coding
description:
  Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: A2005_07865
symbol: OGR32670.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: A2005_07885
symbol: OGR33144.1
gene_biotype: protein_coding
description:
  Antitoxin HicB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_07890
symbol: OGR33145.1
gene_biotype: protein_coding
description:
  Hexulose-6-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_07895
symbol: OGR33146.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: A2005_07915
symbol: groEL
gene_biotype: protein_coding
description:
  Molecular chaperone GroEL; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: A2005_07935
symbol: OGR29394.1
gene_biotype: protein_coding
description:
  Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_07945
symbol: OGR29396.1
gene_biotype: protein_coding
description:
  GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_07955
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase F1 subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: A2005_07960
symbol: atpD
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: A2005_07965
symbol: atpG
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: A2005_07970
symbol: atpA
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: A2005_07975
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase F1 subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: A2005_07980
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase F0 subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: A2005_07985
symbol: atpF-2
gene_biotype: protein_coding
description:
  Hypothetical protein; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: A2005_08025
symbol: engB
gene_biotype: protein_coding
description:
  YihA family ribosome biogenesis GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: A2005_08035
symbol: OGR30756.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.


ensembl_gene_id: A2005_08040
symbol: OGR30757.1
gene_biotype: protein_coding
description:
  Bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate.


ensembl_gene_id: A2005_08045
symbol: cobT
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: A2005_08050
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin 5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: A2005_08055
symbol: OGR33505.1
gene_biotype: protein_coding
description:
  Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_08090
symbol: OGR33512.1
gene_biotype: protein_coding
description:
  Copper-translocating P-type ATPase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_08150
symbol: OGR33523.1
gene_biotype: protein_coding
description:
  tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_08205
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: A2005_08255
symbol: OGR33030.1
gene_biotype: protein_coding
description:
  glutamyl-tRNA amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_08265
symbol: mutS2
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: A2005_08270
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: A2005_08275
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: A2005_08280
symbol: OGR33038.1
gene_biotype: protein_coding
description:
  HNH endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_08295
symbol: OGR33037.1
gene_biotype: protein_coding
description:
  O-acetylhomoserine aminocarboxypropyltransferase; Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_08300
symbol: OGR33039.1
gene_biotype: protein_coding
description:
  acetyl-CoA synthase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_08320
symbol: A2005_08320
gene_biotype: protein_coding
description:
  tRNA-Asn; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_08335
symbol: OGR33793.1
gene_biotype: protein_coding
description:
  Phosphatidylinositol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_08360
symbol: OGR33798.1
gene_biotype: protein_coding
description:
  4,5-DOPA dioxygenase extradiol; Seems to be involved in biofilm formation; in asymptomatic bacteriuria E. coli strains 83972 and VR50, the ygiD gene is upregulated during biofilm formation in urine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_08365
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: A2005_08370
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: A2005_08385
symbol: OGR33801.1
gene_biotype: protein_coding
description:
  16S rRNA (cytosine(967)-C(5))-methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: A2005_08390
symbol: OGR33802.1
gene_biotype: protein_coding
description:
  TIGR01212 family radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_08430
symbol: OGR32356.1
gene_biotype: protein_coding
description:
  Type IV pilus modification protein PilV; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_08465
symbol: OGR32362.1
gene_biotype: protein_coding
description:
  Non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: A2005_08470
symbol: vapC-3
gene_biotype: protein_coding
description:
  Twitching motility protein PilT; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.


ensembl_gene_id: A2005_08480
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: A2005_08490
symbol: OGR32366.1
gene_biotype: protein_coding
description:
  Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_08520
symbol: OGR32371.1
gene_biotype: protein_coding
description:
  2-oxoacid ferredoxin oxidoreductase; Catalyzes the coenzyme A-dependent decarboxylation of 2-oxoacids, such as pyruvate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_08540
symbol: OGR32375.1
gene_biotype: protein_coding
description:
  Aconitate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_08545
symbol: OGR32376.1
gene_biotype: protein_coding
description:
  Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: A2005_08555
symbol: A2005_08555
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Too many ambiguous residues; incomplete; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_08570
symbol: OGR29230.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_08590
symbol: OGR29234.1
gene_biotype: protein_coding
description:
  Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.


ensembl_gene_id: A2005_08630
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: A2005_08635
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: A2005_08640
symbol: OGR29244.1
gene_biotype: protein_coding
description:
  Radical SAM/SPASM domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_08675
symbol: OGR31957.1
gene_biotype: protein_coding
description:
  Desulfoferrodoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_08680
symbol: OGR31958.1
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LeuD family.


ensembl_gene_id: A2005_08685
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: A2005_08690
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: A2005_08695
symbol: OGR31961.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--serine O-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: A2005_08700
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: A2005_08705
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: A2005_08735
symbol: tuf
gene_biotype: protein_coding
description:
  tRNA-Thr; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.


ensembl_gene_id: A2005_08760
symbol: OGR29660.1
gene_biotype: protein_coding
description:
  23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: A2005_08765
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: A2005_08775
symbol: proS
gene_biotype: protein_coding
description:
  proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacy [...]


ensembl_gene_id: A2005_08855
symbol: OGR29694.1
gene_biotype: protein_coding
description:
  YggU family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0235 family.


ensembl_gene_id: A2005_08860
symbol: OGR29695.1
gene_biotype: protein_coding
description:
  Cell division protein DivIVA; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_08870
symbol: OGR29697.1
gene_biotype: protein_coding
description:
  3-deoxy-7-phosphoheptulonate synthase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).


ensembl_gene_id: A2005_08875
symbol: OGR29698.1
gene_biotype: protein_coding
description:
  DNA-3-methyladenine glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_08885
symbol: OGR29700.1
gene_biotype: protein_coding
description:
  Carbon-monoxide dehydrogenase catalytic subunit; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_08905
symbol: OGR29704.1
gene_biotype: protein_coding
description:
  Hydroxyglutarate oxidase; Catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_08935
symbol: OGR33922.1
gene_biotype: protein_coding
description:
  acetyl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_08970
symbol: OGR29964.1
gene_biotype: protein_coding
description:
  Creatinine amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_08975
symbol: queE
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: A2005_08980
symbol: OGR29966.1
gene_biotype: protein_coding
description:
  6-carboxytetrahydropterin synthase QueD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_09045
symbol: OGR29977.1
gene_biotype: protein_coding
description:
  Histone deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_09075
symbol: OGR29980.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily.


ensembl_gene_id: A2005_09095
symbol: OGR29984.1
gene_biotype: protein_coding
description:
  ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_09115
symbol: OGR29987.1
gene_biotype: protein_coding
description:
  Dinitrogenase iron-molybdenum cofactor biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_09120
symbol: OGR29988.1
gene_biotype: protein_coding
description:
  Ferredoxin III, nif-specific; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_09125
symbol: OGR30005.1
gene_biotype: protein_coding
description:
  Nitrogen fixation protein NifX; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_09130
symbol: OGR29989.1
gene_biotype: protein_coding
description:
  Bifunctional nitrogenase iron-molybdenum cofactor biosynthesis protein NifEN; In some organisms the NifE and NifN proteins are encoded separately; functions in assembly of FeMo cofactor; functions in assembly of nitrogenase MoFe; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NifD/NifK/NifE/NifN family.


ensembl_gene_id: A2005_09160
symbol: OGR29995.1
gene_biotype: protein_coding
description:
  Nitrogenase molybdenum-iron protein subunit beta; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.


ensembl_gene_id: A2005_09165
symbol: OGR29996.1
gene_biotype: protein_coding
description:
  Nitrogenase molybdenum-iron protein alpha chain; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_09170
symbol: nifH
gene_biotype: protein_coding
description:
  Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.


ensembl_gene_id: A2005_09200
symbol: OGR29484.1
gene_biotype: protein_coding
description:
  NADPH:quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_09215
symbol: OGR29487.1
gene_biotype: protein_coding
description:
  Transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_09220
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: A2005_09230
symbol: OGR29495.1
gene_biotype: protein_coding
description:
  CDP-paratose 2-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_09240
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanosine(46)-N7)-methyltransferase TrmB; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: A2005_09245
symbol: truD
gene_biotype: protein_coding
description:
  tRNA pseudouridine(13) synthase TruD; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.


ensembl_gene_id: A2005_09255
symbol: OGR29494.1
gene_biotype: protein_coding
description:
  Cation acetate symporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: A2005_09260
symbol: OGR30907.1
gene_biotype: protein_coding
description:
  23S rRNA (uracil-5-)-methyltransferase RumA; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: A2005_09270
symbol: trmJ-3
gene_biotype: protein_coding
description:
  RNA methyltransferase; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.


ensembl_gene_id: A2005_09275
symbol: OGR30909.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: A2005_09280
symbol: OGR30910.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_09310
symbol: OGR29372.1
gene_biotype: protein_coding
description:
  Heterodisulfide reductase subunit A-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_09320
symbol: OGR29374.1
gene_biotype: protein_coding
description:
  Redox-active disulfide protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_09325
symbol: OGR29375.1
gene_biotype: protein_coding
description:
  Thiol reductase thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_09330
symbol: OGR29376.1
gene_biotype: protein_coding
description:
  Thiol:disulfide interchange protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_09340
symbol: tatA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: A2005_09360
symbol: OGR29382.1
gene_biotype: protein_coding
description:
  Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: A2005_09375
symbol: OGR29385.1
gene_biotype: protein_coding
description:
  Phosphonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_09395
symbol: OGR32840.1
gene_biotype: protein_coding
description:
  Glycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: A2005_09400
symbol: ppc
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family.


ensembl_gene_id: A2005_09480
symbol: OGR32856.1
gene_biotype: protein_coding
description:
  Sigma-54-dependent Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_09505
symbol: OGR30509.1
gene_biotype: protein_coding
description:
  Peptidase C39; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_09520
symbol: OGR30512.1
gene_biotype: protein_coding
description:
  NAD(P)-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_09540
symbol: OGR30517.1
gene_biotype: protein_coding
description:
  Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family.


ensembl_gene_id: A2005_09545
symbol: OGR30516.1
gene_biotype: protein_coding
description:
  Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_09555
symbol: OGR30340.1
gene_biotype: protein_coding
description:
  CopG family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_09570
symbol: OGR30353.1
gene_biotype: protein_coding
description:
  RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: A2005_09580
symbol: cowN
gene_biotype: protein_coding
description:
  N(2)-fixation sustaining protein CowN; Is required to sustain N(2)-dependent growth in the presence of low levels of carbon monoxide (CO). Probably acts by protecting the N(2) fixation ability of the nitrogenase complex, which is inactivated in the presence of CO.


ensembl_gene_id: A2005_09620
symbol: OGR30350.1
gene_biotype: protein_coding
description:
  Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family.


ensembl_gene_id: A2005_09625
symbol: OGR30351.1
gene_biotype: protein_coding
description:
  1-pyrroline-5-carboxylate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_09635
symbol: A2005_09635
gene_biotype: protein_coding
description:
  NAD(+) synthase; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_09660
symbol: OGR33770.1
gene_biotype: protein_coding
description:
  YraN family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0102 family.


ensembl_gene_id: A2005_09675
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: A2005_09680
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanosine(37)-N1)-methyltransferase TrmD; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: A2005_09685
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: A2005_09690
symbol: rpsP
gene_biotype: protein_coding
description:
  30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family.


ensembl_gene_id: A2005_09695
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual componen [...]


ensembl_gene_id: A2005_09755
symbol: A2005_09755
gene_biotype: protein_coding
description:
  Cytochrome C oxidase Cbb3; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_09760
symbol: OGR31057.1
gene_biotype: protein_coding
description:
  Energy-dependent translational throttle protein EttA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_09825
symbol: cysS
gene_biotype: protein_coding
description:
  cysteine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: A2005_09890
symbol: tpx
gene_biotype: protein_coding
description:
  Lipid hydroperoxide peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.


ensembl_gene_id: A2005_09900
symbol: A2005_09900
gene_biotype: protein_coding
description:
  Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the peptidase M16 family.


ensembl_gene_id: A2005_09910
symbol: A2005_09910
gene_biotype: protein_coding
description:
  Delta-aminolevulinic acid dehydratase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_09915
symbol: OGR33420.1
gene_biotype: protein_coding
description:
  uroporphyrinogen-III C-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_09920
symbol: hemC
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: A2005_09925
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: A2005_09930
symbol: OGR33423.1
gene_biotype: protein_coding
description:
  C-type cytochrome biogenesis protein CcsB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_09945
symbol: OGR33426.1
gene_biotype: protein_coding
description:
  Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thioredoxin family.


ensembl_gene_id: A2005_09975
symbol: A2005_09975
gene_biotype: protein_coding
description:
  Histidine kinase; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_10010
symbol: OGR31593.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: A2005_10015
symbol: OGR31594.1
gene_biotype: protein_coding
description:
  Acriflavine resistance protein B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: A2005_10020
symbol: OGR31595.1
gene_biotype: protein_coding
description:
  Rhodanese; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10060
symbol: OGR31545.1
gene_biotype: protein_coding
description:
  Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10070
symbol: OGR31547.1
gene_biotype: protein_coding
description:
  Thiol-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10075
symbol: OGR31548.1
gene_biotype: protein_coding
description:
  Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10080
symbol: OGR31549.1
gene_biotype: protein_coding
description:
  Dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: A2005_10090
symbol: OGR31551.1
gene_biotype: protein_coding
description:
  Translation initiation factor SUI1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10100
symbol: OGR31553.1
gene_biotype: protein_coding
description:
  LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: A2005_10130
symbol: rplU
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: A2005_10135
symbol: OGR31556.1
gene_biotype: protein_coding
description:
  50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10150
symbol: OGR32453.1
gene_biotype: protein_coding
description:
  IS110 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10165
symbol: OGR32456.1
gene_biotype: protein_coding
description:
  3-beta hydroxysteroid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10170
symbol: OGR32457.1
gene_biotype: protein_coding
description:
  Peptide synthase; Catalyzes the specific recognition and activation of amino acids during peptide synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10175
symbol: rtcB
gene_biotype: protein_coding
description:
  Hypothetical protein; Metagenomic; derived from metagenome: subsurface metagenome; Belongs to the RtcB family.


ensembl_gene_id: A2005_10190
symbol: OGR29872.1
gene_biotype: protein_coding
description:
  Hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.


ensembl_gene_id: A2005_10195
symbol: OGR29873.1
gene_biotype: protein_coding
description:
  Ni/Fe-hydrogenase, b-type cytochrome subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10200
symbol: OGR29874.1
gene_biotype: protein_coding
description:
  Hydrogenase expression/formation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10210
symbol: pckG
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase; Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family.


ensembl_gene_id: A2005_10225
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine-phosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: A2005_10255
symbol: OGR29885.1
gene_biotype: protein_coding
description:
  CheY-P-specific phosphatase CheC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10265
symbol: OGR29887.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: A2005_10275
symbol: OGR29889.1
gene_biotype: protein_coding
description:
  Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.


ensembl_gene_id: A2005_10285
symbol: OGR29891.1
gene_biotype: protein_coding
description:
  Stress responsive alpha-beta barrel domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10295
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: A2005_10300
symbol: OGR30463.1
gene_biotype: protein_coding
description:
  Nucleoid-associated protein, YbaB/EbfC family; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: A2005_10305
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: A2005_10310
symbol: OGR30465.1
gene_biotype: protein_coding
description:
  Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10315
symbol: OGR30466.1
gene_biotype: protein_coding
description:
  Dynein regulation protein LC7; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10320
symbol: OGR30467.1
gene_biotype: protein_coding
description:
  Gliding-motility protein MglA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10335
symbol: OGR30470.1
gene_biotype: protein_coding
description:
  3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10340
symbol: OGR30471.1
gene_biotype: protein_coding
description:
  acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: A2005_10345
symbol: OGR30472.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: A2005_10350
symbol: pepA
gene_biotype: protein_coding
description:
  Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: A2005_10360
symbol: OGR30474.1
gene_biotype: protein_coding
description:
  Nif3-like dinuclear metal center hexameric protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.


ensembl_gene_id: A2005_10380
symbol: OGR30501.1
gene_biotype: protein_coding
description:
  Rossman fold protein, TIGR00730 family; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10405
symbol: OGR30481.1
gene_biotype: protein_coding
description:
  Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10415
symbol: trkD
gene_biotype: protein_coding
description:
  Potassium transporter Kup; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family.


ensembl_gene_id: A2005_10435
symbol: OGR30487.1
gene_biotype: protein_coding
description:
  Methyltransferase domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10440
symbol: OGR30488.1
gene_biotype: protein_coding
description:
  Transcription elongation factor GreAB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10445
symbol: OGR30489.1
gene_biotype: protein_coding
description:
  Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10455
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: A2005_10480
symbol: OGR30496.1
gene_biotype: protein_coding
description:
  3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UbiD family.


ensembl_gene_id: A2005_10490
symbol: cysM
gene_biotype: protein_coding
description:
  Cysteine synthase B; Catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10500
symbol: OGR30500.1
gene_biotype: protein_coding
description:
  RNA helicase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the DEAD box helicase family.


ensembl_gene_id: A2005_10510
symbol: OGR29797.1
gene_biotype: protein_coding
description:
  TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_10515
symbol: OGR29798.1
gene_biotype: protein_coding
description:
  Tautomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family.


ensembl_gene_id: A2005_10540
symbol: OGR29803.1
gene_biotype: protein_coding
description:
  Dodecin flavoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10550
symbol: OGR29805.1
gene_biotype: protein_coding
description:
  Glycerol acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10560
symbol: OGR29807.1
gene_biotype: protein_coding
description:
  Flavoredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10585
symbol: mutM
gene_biotype: protein_coding
description:
  DNA-formamidopyrimidine glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: A2005_10595
symbol: OGR29814.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10610
symbol: OGR29817.1
gene_biotype: protein_coding
description:
  Aspartate aminotransferase; Catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10615
symbol: OGR29818.1
gene_biotype: protein_coding
description:
  single-stranded-DNA-specific exonuclease RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10630
symbol: secF
gene_biotype: protein_coding
description:
  Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: A2005_10635
symbol: secD
gene_biotype: protein_coding
description:
  Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: A2005_10640
symbol: yajC
gene_biotype: protein_coding
description:
  Preprotein translocase subunit YajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.


ensembl_gene_id: A2005_10650
symbol: queA
gene_biotype: protein_coding
description:
  tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: A2005_10665
symbol: OGR29828.1
gene_biotype: protein_coding
description:
  YgiQ family radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10675
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: A2005_10680
symbol: rpsI
gene_biotype: protein_coding
description:
  30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family.


ensembl_gene_id: A2005_10685
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: A2005_10705
symbol: fur
gene_biotype: protein_coding
description:
  Transcriptional repressor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family.


ensembl_gene_id: A2005_10710
symbol: polA
gene_biotype: protein_coding
description:
  Hypothetical protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: A2005_10735
symbol: OGR33164.1
gene_biotype: protein_coding
description:
  Cation-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10745
symbol: OGR33166.1
gene_biotype: protein_coding
description:
  Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_10755
symbol: A2005_10755
gene_biotype: protein_coding
description:
  B12-binding domain-containing radical SAM protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_10780
symbol: nadK
gene_biotype: protein_coding
description:
  AAA family ATPase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: A2005_10800
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: A2005_10810
symbol: argJ
gene_biotype: protein_coding
description:
  Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: A2005_10815
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: A2005_10845
symbol: valS
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: A2005_10850
symbol: OGR30787.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate--protein phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: A2005_10855
symbol: OGR30788.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: A2005_10875
symbol: A2005_10875
gene_biotype: protein_coding
description:
  Glycolate oxidase subunit GlcD; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10885
symbol: OGR33083.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein TraB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10925
symbol: A2005_10925
gene_biotype: protein_coding
description:
  Fis family transcriptional regulator; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10940
symbol: OGR30314.1
gene_biotype: protein_coding
description:
  Elongation factor P; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the elongation factor P family.


ensembl_gene_id: A2005_10950
symbol: pstB
gene_biotype: protein_coding
description:
  ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10960
symbol: OGR33961.1
gene_biotype: protein_coding
description:
  Phosphate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_10970
symbol: OGR33963.1
gene_biotype: protein_coding
description:
  RNA degradosome polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP).


ensembl_gene_id: A2005_10980
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: A2005_10985
symbol: smg
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the Smg family.


ensembl_gene_id: A2005_10990
symbol: OGR30186.1
gene_biotype: protein_coding
description:
  DNA protecting protein DprA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_11000
symbol: OGR30188.1
gene_biotype: protein_coding
description:
  Tol-pal system protein YbgF; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_11005
symbol: OGR30189.1
gene_biotype: protein_coding
description:
  Peptidase U32; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_11025
symbol: OGR30193.1
gene_biotype: protein_coding
description:
  Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_11045
symbol: OGR29117.1
gene_biotype: protein_coding
description:
  Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: A2005_11080
symbol: OGR29124.1
gene_biotype: protein_coding
description:
  Histidine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_11085
symbol: OGR29125.1
gene_biotype: protein_coding
description:
  CoF synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_11095
symbol: acpP
gene_biotype: protein_coding
description:
  Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.


ensembl_gene_id: A2005_11100
symbol: OGR29127.1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: A2005_11115
symbol: fabG
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP reductase; Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_11125
symbol: selA
gene_biotype: protein_coding
description:
  L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.


ensembl_gene_id: A2005_11130
symbol: OGR29132.1
gene_biotype: protein_coding
description:
  Selenocysteine-specific translation elongation factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_11160
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: A2005_11165
symbol: OGR30399.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate synthase regulatory protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: A2005_11180
symbol: OGR30402.1
gene_biotype: protein_coding
description:
  Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family.


ensembl_gene_id: A2005_11210
symbol: OGR30408.1
gene_biotype: protein_coding
description:
  Molybdopterin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: A2005_11225
symbol: rlmN
gene_biotype: protein_coding
description:
  Beta-ketoacyl-[acyl-carrier-protein] synthase II; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: A2005_11230
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: A2005_11360
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.


ensembl_gene_id: A2005_11375
symbol: OGR32132.1
gene_biotype: protein_coding
description:
  Periplasmic polysaccharide biosynthesis/export protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_11400
symbol: OGR32165.1
gene_biotype: protein_coding
description:
  Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: A2005_11430
symbol: OGR32142.1
gene_biotype: protein_coding
description:
  Sugar transferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_11485
symbol: OGR32166.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_11490
symbol: OGR32153.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_11495
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: A2005_11500
symbol: OGR32155.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_11505
symbol: thiE-2
gene_biotype: protein_coding
description:
  Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: A2005_11520
symbol: A2005_11520
gene_biotype: protein_coding
description:
  Cation acetate symporter; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_11540
symbol: OGR32162.1
gene_biotype: protein_coding
description:
  Acylpyruvase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_11565
symbol: atpB-2
gene_biotype: protein_coding
description:
  V-type ATP synthase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.


ensembl_gene_id: A2005_11570
symbol: OGR29604.1
gene_biotype: protein_coding
description:
  V-type ATP synthase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_11595
symbol: OGR29609.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase 116 kDa subunit family.


ensembl_gene_id: A2005_11605
symbol: OGR29611.1
gene_biotype: protein_coding
description:
  Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_11620
symbol: OGR29636.1
gene_biotype: protein_coding
description:
  malyl-CoA thiolesterase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family.


ensembl_gene_id: A2005_11625
symbol: OGR29614.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0178 family.


ensembl_gene_id: A2005_11630
symbol: rlmJ
gene_biotype: protein_coding
description:
  23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ; Specifically methylates the adenine in position 2030 of 23S rRNA.


ensembl_gene_id: A2005_11635
symbol: OGR29616.1
gene_biotype: protein_coding
description:
  Plasmid maintenance system killer; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_11650
symbol: OGR29619.1
gene_biotype: protein_coding
description:
  Toxin of toxin-antitoxin system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_11660
symbol: OGR29621.1
gene_biotype: protein_coding
description:
  ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_11665
symbol: OGR29622.1
gene_biotype: protein_coding
description:
  Electron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_11690
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: A2005_11745
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription termination/antitermination protein NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: A2005_11750
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: A2005_11755
symbol: OGR28951.1
gene_biotype: protein_coding
description:
  23S rRNA (uracil-5-)-methyltransferase RumA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: A2005_11790
symbol: lspA
gene_biotype: protein_coding
description:
  Hypothetical protein; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: A2005_11865
symbol: plsY
gene_biotype: protein_coding
description:
  Acyl-phosphate glycerol 3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: A2005_11870
symbol: mltG
gene_biotype: protein_coding
description:
  Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: A2005_11885
symbol: OGR30640.1
gene_biotype: protein_coding
description:
  Peptide-methionine (R)-S-oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MsrB Met sulfoxide reductase family.


ensembl_gene_id: A2005_11890
symbol: OGR30638.1
gene_biotype: protein_coding
description:
  succinate--CoA ligase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: A2005_11915
symbol: OGR32441.1
gene_biotype: protein_coding
description:
  Virulence factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_11935
symbol: rlpA
gene_biotype: protein_coding
description:
  Hypothetical protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: A2005_11940
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: A2005_11945
symbol: OGR32770.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_11950
symbol: OGR32771.1
gene_biotype: protein_coding
description:
  Septum formation protein Maf; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Maf family.


ensembl_gene_id: A2005_11955
symbol: OGR31183.1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: A2005_11975
symbol: OGR31186.1
gene_biotype: protein_coding
description:
  Redox-active disulfide protein 2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_12015
symbol: OGR31194.1
gene_biotype: protein_coding
description:
  Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.


ensembl_gene_id: A2005_12030
symbol: clpB
gene_biotype: protein_coding
description:
  ATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: A2005_12040
symbol: OGR31204.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.


ensembl_gene_id: A2005_12055
symbol: OGR31201.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0758 family.


ensembl_gene_id: A2005_12075
symbol: rpsB
gene_biotype: protein_coding
description:
  30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family.


ensembl_gene_id: A2005_12080
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: A2005_12090
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: A2005_12100
symbol: OGR30439.1
gene_biotype: protein_coding
description:
  Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: A2005_12105
symbol: OGR30440.1
gene_biotype: protein_coding
description:
  Phosphatidate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDS family.


ensembl_gene_id: A2005_12110
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: A2005_12115
symbol: OGR30447.1
gene_biotype: protein_coding
description:
  RIP metalloprotease RseP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_12120
symbol: OGR30442.1
gene_biotype: protein_coding
description:
  tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_12125
symbol: OGR30443.1
gene_biotype: protein_coding
description:
  DUF465 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_12130
symbol: ilvD
gene_biotype: protein_coding
description:
  Dihydroxy-acid dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IlvD/Edd family.


ensembl_gene_id: A2005_12135
symbol: OGR30445.1
gene_biotype: protein_coding
description:
  Acetolactate synthase, large subunit, biosynthetic type; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_12140
symbol: OGR30446.1
gene_biotype: protein_coding
description:
  Acetolactate synthase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_12150
symbol: trmFO
gene_biotype: protein_coding
description:
  methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.


ensembl_gene_id: A2005_12155
symbol: nuoI
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: A2005_12160
symbol: OGR32263.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: A2005_12165
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: A2005_12185
symbol: OGR32268.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_12190
symbol: nuoN
gene_biotype: protein_coding
description:
  Hypothetical protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: A2005_12195
symbol: OGR32270.1
gene_biotype: protein_coding
description:
  Hemolysin III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_12225
symbol: OGR32276.1
gene_biotype: protein_coding
description:
  4-hydroxybenzoate octaprenyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UbiA prenyltransferase family.


ensembl_gene_id: A2005_12230
symbol: ubiX
gene_biotype: protein_coding
description:
  Aromatic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: A2005_12235
symbol: mqnE
gene_biotype: protein_coding
description:
  Aminofutalosine synthase MqnE; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate.


ensembl_gene_id: A2005_12240
symbol: mqnC
gene_biotype: protein_coding
description:
  Dehypoxanthine futalosine cyclase; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: A2005_12245
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: A2005_12255
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: A2005_12265
symbol: lexA
gene_biotype: protein_coding
description:
  Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: A2005_12300
symbol: OGR31638.1
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_12305
symbol: hisI
gene_biotype: protein_coding
description:
  phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.


ensembl_gene_id: A2005_12310
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily.


ensembl_gene_id: A2005_12320
symbol: OGR31642.1
gene_biotype: protein_coding
description:
  Peptidase M48; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_12345
symbol: OGR31646.1
gene_biotype: protein_coding
description:
  Flavin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_12355
symbol: OGR31648.1
gene_biotype: protein_coding
description:
  Dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_12360
symbol: OGR31649.1
gene_biotype: protein_coding
description:
  Twin-arginine translocation pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_12365
symbol: OGR31650.1
gene_biotype: protein_coding
description:
  (2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_12370
symbol: clsB
gene_biotype: protein_coding
description:
  Cardiolipin synthase B; Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.


ensembl_gene_id: A2005_12400
symbol: A2005_12400
gene_biotype: protein_coding
description:
  Protein TolR; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_12415
symbol: OGR32549.1
gene_biotype: protein_coding
description:
  30S ribosomal protein S1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_12420
symbol: OGR32550.1
gene_biotype: protein_coding
description:
  Hemolysin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_12445
symbol: OGR32554.1
gene_biotype: protein_coding
description:
  Histidine triad nucleotide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_12480
symbol: A2005_12480
gene_biotype: protein_coding
description:
  Molecular chaperone HtpG; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the P(II) protein family.


ensembl_gene_id: A2005_12485
symbol: OGR32561.1
gene_biotype: protein_coding
description:
  Type I glutamate--ammonia ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_12490
symbol: OGR32562.1
gene_biotype: protein_coding
description:
  Threonine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_12515
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: A2005_12520
symbol: OGR32568.1
gene_biotype: protein_coding
description:
  Disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_12525
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: A2005_12530
symbol: carB
gene_biotype: protein_coding
description:
  Carbamoyl phosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CarB family.


ensembl_gene_id: A2005_12550
symbol: carA
gene_biotype: protein_coding
description:
  Carbamoyl phosphate synthase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CarA family.


ensembl_gene_id: A2005_12560
symbol: A2005_12560
gene_biotype: protein_coding
description:
  Peptidase; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: A2005_12580
symbol: serS
gene_biotype: protein_coding
description:
  serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: A2005_12615
symbol: OGR33598.1
gene_biotype: protein_coding
description:
  Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_12640
symbol: metG
gene_biotype: protein_coding
description:
  methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: A2005_12650
symbol: OGR33574.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_12655
symbol: tmk
gene_biotype: protein_coding
description:
  dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: A2005_12660
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: A2005_12665
symbol: era
gene_biotype: protein_coding
description:
  GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: A2005_12670
symbol: der
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: A2005_12685
symbol: OGR33580.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_12730
symbol: OGR33589.1
gene_biotype: protein_coding
description:
  Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_12740
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: A2005_12745
symbol: leuS
gene_biotype: protein_coding
description:
  leucine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: A2005_12780
symbol: OGR29749.1
gene_biotype: protein_coding
description:
  2-oxoacid:ferredoxin oxidoreductase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_12785
symbol: OGR29750.1
gene_biotype: protein_coding
description:
  2-oxoglutarate oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_12790
symbol: OGR29751.1
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate dehydrogenase subunit VorB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_12820
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: A2005_12825
symbol: OGR29758.1
gene_biotype: protein_coding
description:
  RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: A2005_12835
symbol: pcm
gene_biotype: protein_coding
description:
  protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.


ensembl_gene_id: A2005_12840
symbol: surE
gene_biotype: protein_coding
description:
  5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: A2005_12845
symbol: OGR29762.1
gene_biotype: protein_coding
description:
  MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_12850
symbol: OGR29763.1
gene_biotype: protein_coding
description:
  Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: A2005_12855
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: A2005_12860
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanine--tRNA ligase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: A2005_12865
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: A2005_12870
symbol: rpmI
gene_biotype: protein_coding
description:
  50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL35 family.


ensembl_gene_id: A2005_12875
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: A2005_12880
symbol: thrS
gene_biotype: protein_coding
description:
  threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: A2005_12900
symbol: A2005_12900
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_12905
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: A2005_12910
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: A2005_12915
symbol: OGR30659.1
gene_biotype: protein_coding
description:
  Stress-responsive transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_12925
symbol: OGR30661.1
gene_biotype: protein_coding
description:
  Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_12935
symbol: OGR30663.1
gene_biotype: protein_coding
description:
  Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_12940
symbol: OGR30664.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: A2005_12995
symbol: OGR30672.1
gene_biotype: protein_coding
description:
  AmmeMemoRadiSam system protein B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MEMO1 family.


ensembl_gene_id: A2005_13000
symbol: gltX
gene_biotype: protein_coding
description:
  glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).


ensembl_gene_id: A2005_13015
symbol: OGR30676.1
gene_biotype: protein_coding
description:
  Alpha-glucan phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_13040
symbol: OGR30680.1
gene_biotype: protein_coding
description:
  Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: A2005_13050
symbol: gmhA
gene_biotype: protein_coding
description:
  Cytidylate kinase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.


ensembl_gene_id: A2005_13060
symbol: hldE
gene_biotype: protein_coding
description:
  Bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: A2005_13065
symbol: OGR30079.1
gene_biotype: protein_coding
description:
  Lipopolysaccharide heptosyltransferase II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_13070
symbol: OGR30080.1
gene_biotype: protein_coding
description:
  Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_13075
symbol: OGR30089.1
gene_biotype: protein_coding
description:
  D,D-heptose 1,7-bisphosphate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_13090
symbol: rpmF
gene_biotype: protein_coding
description:
  50S ribosomal protein L32; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL32 family.


ensembl_gene_id: A2005_13100
symbol: fabH-2
gene_biotype: protein_coding
description:
  Phosphate acyltransferase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: A2005_13105
symbol: OGR30085.1
gene_biotype: protein_coding
description:
  [acyl-carrier-protein] S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_13110
symbol: OGR30086.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: A2005_13130
symbol: ispH
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: A2005_13135
symbol: cmk
gene_biotype: protein_coding
description:
  Cytidylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_13140
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: A2005_13145
symbol: OGR31328.1
gene_biotype: protein_coding
description:
  Prephenate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_13160
symbol: OGR31331.1
gene_biotype: protein_coding
description:
  Poxvirus G6; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_13165
symbol: OGR31332.1
gene_biotype: protein_coding
description:
  2-acyl-glycerophospho-ethanolamine acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_13170
symbol: OGR31333.1
gene_biotype: protein_coding
description:
  Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: A2005_13185
symbol: OGR31336.1
gene_biotype: protein_coding
description:
  NADPH-dependent 7-cyano-7-deazaguanine reductase QueF; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.


