# geneInfo

ensembl_gene_id: SAMN05443637_10110
symbol: nadE
gene_biotype: protein_coding
description:
  NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: SAMN05443637_101108
symbol: ctaB
gene_biotype: protein_coding
description:
  Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.


ensembl_gene_id: SAMN05443637_10111
symbol: nth
gene_biotype: protein_coding
description:
  DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: SAMN05443637_101110
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.


ensembl_gene_id: SAMN05443637_101111
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: SAMN05443637_101121
symbol: SHJ92500.1
gene_biotype: protein_coding
description:
  Molydopterin dinucleotide binding domain-containing protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.


ensembl_gene_id: SAMN05443637_101123
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: SAMN05443637_101125
symbol: rbpA
gene_biotype: protein_coding
description:
  RNA polymerase-binding protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.


ensembl_gene_id: SAMN05443637_101126
symbol: SHJ92583.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: SAMN05443637_101127
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: SAMN05443637_101129
symbol: SHJ92635.1
gene_biotype: protein_coding
description:
  Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN05443637_101131
symbol: SHJ92669.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, cofD-related; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.


ensembl_gene_id: SAMN05443637_101133
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: SAMN05443637_101136
symbol: SHJ92750.1
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase (NAD+) catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate.


ensembl_gene_id: SAMN05443637_101139
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: SAMN05443637_101140
symbol: ribBA
gene_biotype: protein_coding
description:
  3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: SAMN05443637_101144
symbol: SHJ92884.1
gene_biotype: protein_coding
description:
  16S rRNA (cytosine967-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: SAMN05443637_101145
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: SAMN05443637_101146
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: SAMN05443637_101147
symbol: priA
gene_biotype: protein_coding
description:
  Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: SAMN05443637_101148
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: SAMN05443637_101150
symbol: SHJ92987.1
gene_biotype: protein_coding
description:
  Phosphopantothenate-cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: SAMN05443637_101151
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: SAMN05443637_101157
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: SAMN05443637_101158
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: SAMN05443637_101159
symbol: pyrR
gene_biotype: protein_coding
description:
  Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.


ensembl_gene_id: SAMN05443637_101163
symbol: nusB
gene_biotype: protein_coding
description:
  NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: SAMN05443637_101164
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: SAMN05443637_101166
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: SAMN05443637_101167
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: SAMN05443637_101168
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: SAMN05443637_101169
symbol: tatC
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: SAMN05443637_101170
symbol: tatA
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: SAMN05443637_101175
symbol: pafA
gene_biotype: protein_coding
description:
  Proteasome accessory factor A; Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side- chain amino group of a substrate lysine.


ensembl_gene_id: SAMN05443637_101179
symbol: prcA
gene_biotype: protein_coding
description:
  Proteasome alpha subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1A family.


ensembl_gene_id: SAMN05443637_101180
symbol: prcB
gene_biotype: protein_coding
description:
  Proteasome beta subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1B family.


ensembl_gene_id: SAMN05443637_101181
symbol: pup
gene_biotype: protein_coding
description:
  Prokaryotic ubiquitin-like protein Pup; Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation. Belongs to the prokaryotic ubiquitin-like protein family.


ensembl_gene_id: SAMN05443637_101189
symbol: SHJ93726.1
gene_biotype: protein_coding
description:
  Peroxiredoxin (alkyl hydroperoxide reductase subunit C); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.


ensembl_gene_id: SAMN05443637_101190
symbol: arc
gene_biotype: protein_coding
description:
  Proteasome-associated ATPase; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis.


ensembl_gene_id: SAMN05443637_101191
symbol: SHJ93761.1
gene_biotype: protein_coding
description:
  tRNA (adenine57-N1/adenine58-N1)-methyltransferase; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA.


ensembl_gene_id: SAMN05443637_101194
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase (homohexameric); Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily.


ensembl_gene_id: SAMN05443637_101196
symbol: SHJ93858.1
gene_biotype: protein_coding
description:
  Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.


ensembl_gene_id: SAMN05443637_101197
symbol: SHJ93887.1
gene_biotype: protein_coding
description:
  Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.


ensembl_gene_id: SAMN05443637_101206
symbol: mshC
gene_biotype: protein_coding
description:
  L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily.


ensembl_gene_id: SAMN05443637_101241
symbol: SHJ94802.1
gene_biotype: protein_coding
description:
  MFS transporter, DHA2 family, lincomycin resistance protein; Belongs to the major facilitator superfamily.


ensembl_gene_id: SAMN05443637_101242
symbol: SHJ94818.1
gene_biotype: protein_coding
description:
  Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: SAMN05443637_101262
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: SAMN05443637_101265
symbol: SHJ95395.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN05443637_101278
symbol: egtD
gene_biotype: protein_coding
description:
  L-histidine Nalpha-methyltransferase; Catalyzes the SAM-dependent triple methylation of the alpha- amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine; Belongs to the methyltransferase superfamily. EgtD family.


ensembl_gene_id: SAMN05443637_101279
symbol: egtC
gene_biotype: protein_coding
description:
  Glutamine amidotransferase; Catalyzes the hydrolysis of the gamma-glutamyl amide bond of hercynyl-gamma-L-glutamyl-L-cysteine sulfoxide to produce hercynylcysteine sulfoxide, a step in the biosynthesis pathway of ergothioneine.


ensembl_gene_id: SAMN05443637_101280
symbol: egtB
gene_biotype: protein_coding
description:
  iron(II)-dependent oxidoreductase; Catalyzes the oxidative sulfurization of hercynine (N- alpha,N-alpha,N-alpha-trimethyl-L-histidine) into hercynyl-gamma-L- glutamyl-L-cysteine sulfoxide, a step in the biosynthesis pathway of ergothioneine; Belongs to the EgtB family.


ensembl_gene_id: SAMN05443637_101281
symbol: egtA
gene_biotype: protein_coding
description:
  Glutamate--cysteine ligase; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). This compound is used as substrate for the biosynthesis of the low- molecular thiol compound ergothioneine.


ensembl_gene_id: SAMN05443637_101306
symbol: gcvP
gene_biotype: protein_coding
description:
  Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.


ensembl_gene_id: SAMN05443637_101312
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: SAMN05443637_101319
symbol: fgd
gene_biotype: protein_coding
description:
  Coenzyme F420-dependent glucose-6-phosphate dehydrogenase; Catalyzes the coenzyme F420-dependent oxidation of glucose 6- phosphate (G6P) to 6-phosphogluconolactone.


ensembl_gene_id: SAMN05443637_101331
symbol: SHJ96630.1
gene_biotype: protein_coding
description:
  Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/beta-phosphoglucomutase family hydrolase.


ensembl_gene_id: SAMN05443637_101380
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: SAMN05443637_101423
symbol: SHJ98259.1
gene_biotype: protein_coding
description:
  D-xylose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN05443637_101431
symbol: psuG
gene_biotype: protein_coding
description:
  Pseudouridine-5'-phosphate glycosidase; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family.


ensembl_gene_id: SAMN05443637_101437
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: SAMN05443637_101440
symbol: SHJ98542.1
gene_biotype: protein_coding
description:
  RNA polymerase nonessential primary-like sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN05443637_101452
symbol: SHJ98755.1
gene_biotype: protein_coding
description:
  Urate oxidase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.


ensembl_gene_id: SAMN05443637_10153
symbol: SHJ91223.1
gene_biotype: protein_coding
description:
  Ornithine--oxo-acid transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05443637_10158
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: SAMN05443637_10159
symbol: SHJ91321.1
gene_biotype: protein_coding
description:
  Putative holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: SAMN05443637_10160
symbol: mltG
gene_biotype: protein_coding
description:
  UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.


ensembl_gene_id: SAMN05443637_10167
symbol: ureG
gene_biotype: protein_coding
description:
  Urease accessory protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.


ensembl_gene_id: SAMN05443637_10168
symbol: ureD
gene_biotype: protein_coding
description:
  Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.


ensembl_gene_id: SAMN05443637_10170
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: SAMN05443637_10179
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: SAMN05443637_10182
symbol: rbpA-2
gene_biotype: protein_coding
description:
  RNA polymerase-binding protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.


ensembl_gene_id: SAMN05443637_10187
symbol: SHJ91848.1
gene_biotype: protein_coding
description:
  Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.


ensembl_gene_id: SAMN05443637_1019
symbol: selO
gene_biotype: protein_coding
description:
  Uncharacterized conserved protein YdiU, UPF0061 family; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.


ensembl_gene_id: SAMN05443637_10197
symbol: SHJ92061.1
gene_biotype: protein_coding
description:
  Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.


ensembl_gene_id: SAMN05443637_10210
symbol: SHK02182.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: SAMN05443637_102108
symbol: SHK04197.1
gene_biotype: protein_coding
description:
  Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05443637_102111
symbol: SHK04261.1
gene_biotype: protein_coding
description:
  Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).


ensembl_gene_id: SAMN05443637_102120
symbol: iolG
gene_biotype: protein_coding
description:
  Myo-inositol 2-dehydrogenase; Involved in the oxidation of myo-inositol (MI) to 2-keto-myo- inositol (2KMI or 2-inosose).


ensembl_gene_id: SAMN05443637_102122
symbol: SHK04472.1
gene_biotype: protein_coding
description:
  Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN05443637_10214
symbol: SHK02257.1
gene_biotype: protein_coding
description:
  Nitrate reductase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN05443637_102143
symbol: ilvA
gene_biotype: protein_coding
description:
  L-threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: SAMN05443637_102169
symbol: SHK05344.1
gene_biotype: protein_coding
description:
  Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.


ensembl_gene_id: SAMN05443637_102174
symbol: SHK05454.1
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen-3 oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: SAMN05443637_102176
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: SAMN05443637_102177
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: SAMN05443637_102178
symbol: SHK05513.1
gene_biotype: protein_coding
description:
  16S rRNA (uracil1498-N3)-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: SAMN05443637_102185
symbol: ybeY
gene_biotype: protein_coding
description:
  Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: SAMN05443637_102188
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: SAMN05443637_102192
symbol: SHK05789.1
gene_biotype: protein_coding
description:
  Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: SAMN05443637_102201
symbol: glyQS
gene_biotype: protein_coding
description:
  glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: SAMN05443637_102217
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: SAMN05443637_102219
symbol: tam
gene_biotype: protein_coding
description:
  Trans-aconitate 2-methyltransferase; Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate.


ensembl_gene_id: SAMN05443637_102246
symbol: SHK06827.1
gene_biotype: protein_coding
description:
  Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: SAMN05443637_102283
symbol: SHK07624.1
gene_biotype: protein_coding
description:
  Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.


ensembl_gene_id: SAMN05443637_102306
symbol: cobB
gene_biotype: protein_coding
description:
  Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: SAMN05443637_102309
symbol: cobT
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: SAMN05443637_102312
symbol: cbiD
gene_biotype: protein_coding
description:
  cobalt-precorrin-5B (C1)-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.


ensembl_gene_id: SAMN05443637_102320
symbol: SHK08415.1
gene_biotype: protein_coding
description:
  Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.


ensembl_gene_id: SAMN05443637_10237
symbol: SHK02698.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 1, HAAT family /amino acid/amide ABC transporter membrane protein 2, HAAT family /amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN05443637_1024
symbol: SHK02071.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN05443637_1027
symbol: SHK02123.1
gene_biotype: protein_coding
description:
  ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain.


ensembl_gene_id: SAMN05443637_10274
symbol: SHK03507.1
gene_biotype: protein_coding
description:
  Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN05443637_103104
symbol: SHK15445.1
gene_biotype: protein_coding
description:
  NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN05443637_10311
symbol: hypA
gene_biotype: protein_coding
description:
  Hydrogenase-3 nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.


ensembl_gene_id: SAMN05443637_103125
symbol: SHK15901.1
gene_biotype: protein_coding
description:
  Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.


ensembl_gene_id: SAMN05443637_103126
symbol: SHK15922.1
gene_biotype: protein_coding
description:
  Choline/glycine/proline betaine transport protein; Belongs to the BCCT transporter (TC 2.A.15) family.


ensembl_gene_id: SAMN05443637_103131
symbol: azoR
gene_biotype: protein_coding
description:
  FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.


ensembl_gene_id: SAMN05443637_103139
symbol: icmF
gene_biotype: protein_coding
description:
  methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.


ensembl_gene_id: SAMN05443637_103159
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: SAMN05443637_103176
symbol: katG
gene_biotype: protein_coding
description:
  Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.


ensembl_gene_id: SAMN05443637_103198
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: SAMN05443637_103204
symbol: pfp
gene_biotype: protein_coding
description:
  Pyrophosphate-dependent phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.


ensembl_gene_id: SAMN05443637_103224
symbol: SHK17673.1
gene_biotype: protein_coding
description:
  Cobalt/nickel transport system ATP-binding protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.


ensembl_gene_id: SAMN05443637_103226
symbol: cbiN
gene_biotype: protein_coding
description:
  Cobalt/nickel transport protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.


ensembl_gene_id: SAMN05443637_103227
symbol: cbiM
gene_biotype: protein_coding
description:
  Cobalt/nickel transport system permease protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.


ensembl_gene_id: SAMN05443637_103237
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: SAMN05443637_103239
symbol: SHK17924.1
gene_biotype: protein_coding
description:
  Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.


ensembl_gene_id: SAMN05443637_103240
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: SAMN05443637_103241
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: SAMN05443637_103243
symbol: prfA
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 1 (bRF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: SAMN05443637_103244
symbol: prmC
gene_biotype: protein_coding
description:
  Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: SAMN05443637_103245
symbol: SHK18037.1
gene_biotype: protein_coding
description:
  tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family; Belongs to the SUA5 family.


ensembl_gene_id: SAMN05443637_103247
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: SAMN05443637_103250
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: SAMN05443637_103252
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: SAMN05443637_103253
symbol: atpH
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN05443637_103254
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: SAMN05443637_103255
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: SAMN05443637_103256
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: SAMN05443637_103257
symbol: atpC
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: SAMN05443637_103260
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: SAMN05443637_103279
symbol: nucS
gene_biotype: protein_coding
description:
  Hypothetical protein; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family.


ensembl_gene_id: SAMN05443637_103297
symbol: glgB
gene_biotype: protein_coding
description:
  1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: SAMN05443637_103300
symbol: glgE
gene_biotype: protein_coding
description:
  Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.


ensembl_gene_id: SAMN05443637_103323
symbol: SHK19590.1
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN05443637_103329
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: SAMN05443637_103332
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: SAMN05443637_103338
symbol: gatC
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: SAMN05443637_103339
symbol: gatA
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: SAMN05443637_103340
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: SAMN05443637_103356
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: SAMN05443637_103358
symbol: SHK20271.1
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: SAMN05443637_103359
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. Belongs to the isocitrate and isopropylmalate dehydrogenases family. LeuB type 2 subfamily.


ensembl_gene_id: SAMN05443637_103371
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: SAMN05443637_103372
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: SAMN05443637_103373
symbol: SHK20553.1
gene_biotype: protein_coding
description:
  DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: SAMN05443637_103375
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: SAMN05443637_103376
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: SAMN05443637_103382
symbol: nhaA
gene_biotype: protein_coding
description:
  Sodium/proton antiporter, NhaA family; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.


ensembl_gene_id: SAMN05443637_103395
symbol: SHK20980.1
gene_biotype: protein_coding
description:
  Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.


ensembl_gene_id: SAMN05443637_103402
symbol: SHK21109.1
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: SAMN05443637_103403
symbol: clpS
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: SAMN05443637_10360
symbol: SHK14513.1
gene_biotype: protein_coding
description:
  Nitrile hydratase; NHase catalyzes the hydration of various nitrile compounds to the corresponding amides; Belongs to the nitrile hydratase subunit beta family.


ensembl_gene_id: SAMN05443637_10361
symbol: SHK14531.1
gene_biotype: protein_coding
description:
  Nitrile hydratase; NHase catalyzes the hydration of various nitrile compounds to the corresponding amides.


ensembl_gene_id: SAMN05443637_10385
symbol: SHK15059.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor synthesis domain-containing protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN05443637_10387
symbol: SHK15119.1
gene_biotype: protein_coding
description:
  Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN05443637_10394
symbol: orn
gene_biotype: protein_coding
description:
  Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family.


ensembl_gene_id: SAMN05443637_10412
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase-3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: SAMN05443637_10414
symbol: SHK23856.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: SAMN05443637_104143
symbol: SHK26507.1
gene_biotype: protein_coding
description:
  Cytochrome c oxidase subunit IV; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.


ensembl_gene_id: SAMN05443637_104144
symbol: SHK26530.1
gene_biotype: protein_coding
description:
  Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).


ensembl_gene_id: SAMN05443637_104156
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: SAMN05443637_104161
symbol: pepA
gene_biotype: protein_coding
description:
  Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: SAMN05443637_104166
symbol: lipB
gene_biotype: protein_coding
description:
  Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: SAMN05443637_104168
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: SAMN05443637_104180
symbol: glnE
gene_biotype: protein_coding
description:
  Glutamate-ammonia-ligase adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transd [...]


ensembl_gene_id: SAMN05443637_104186
symbol: panB
gene_biotype: protein_coding
description:
  Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: SAMN05443637_104197
symbol: SHK27809.1
gene_biotype: protein_coding
description:
  Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.


ensembl_gene_id: SAMN05443637_10421
symbol: SHK23982.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: SAMN05443637_10422
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: SAMN05443637_104227
symbol: menC
gene_biotype: protein_coding
description:
  O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).


ensembl_gene_id: SAMN05443637_104233
symbol: SHK28619.1
gene_biotype: protein_coding
description:
  4-hydroxy 2-oxovalerate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family.


ensembl_gene_id: SAMN05443637_104234
symbol: SHK28635.1
gene_biotype: protein_coding
description:
  Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.


ensembl_gene_id: SAMN05443637_10424
symbol: lexA
gene_biotype: protein_coding
description:
  SOS-response transcriptional repressor, LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: SAMN05443637_104254
symbol: recC
gene_biotype: protein_coding
description:
  DNA helicase/exodeoxyribonuclease V, gamma subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recomb [...]


ensembl_gene_id: SAMN05443637_104255
symbol: recB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V beta subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and rep [...]


ensembl_gene_id: SAMN05443637_104256
symbol: recD
gene_biotype: protein_coding
description:
  DNA helicase/exodeoxyribonuclease V, alpha subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recomb [...]


ensembl_gene_id: SAMN05443637_10426
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: SAMN05443637_104260
symbol: sbcD
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: SAMN05443637_104268
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.


ensembl_gene_id: SAMN05443637_104269
symbol: SHK29457.1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN05443637_10427
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: SAMN05443637_104274
symbol: SHK29572.1
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.


ensembl_gene_id: SAMN05443637_10428
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: SAMN05443637_104280
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: SAMN05443637_10436
symbol: miaB
gene_biotype: protein_coding
description:
  tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: SAMN05443637_10451
symbol: SHK24554.1
gene_biotype: protein_coding
description:
  Succinate dehydrogenase subunit B; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.


ensembl_gene_id: SAMN05443637_10456
symbol: recX
gene_biotype: protein_coding
description:
  SOS response regulatory protein OraA/RecX, interacts with RecA; Modulates RecA activity; Belongs to the RecX family.


ensembl_gene_id: SAMN05443637_10457
symbol: recA
gene_biotype: protein_coding
description:
  Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: SAMN05443637_1047
symbol: SHK23738.1
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: SAMN05443637_10473
symbol: SHK25036.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN05443637_10474
symbol: rimO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: SAMN05443637_10479
symbol: SHK25164.1
gene_biotype: protein_coding
description:
  L-lysine 6-transaminase precursor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05443637_105118
symbol: SHK34984.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol---serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN05443637_105119
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: SAMN05443637_105120
symbol: SHK35031.1
gene_biotype: protein_coding
description:
  Molybdopterin molybdochelatase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN05443637_105121
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: SAMN05443637_10513
symbol: rsmI
gene_biotype: protein_coding
description:
  16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: SAMN05443637_105134
symbol: SHK35386.1
gene_biotype: protein_coding
description:
  Manganese transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: SAMN05443637_105152
symbol: moaC
gene_biotype: protein_coding
description:
  Cyclic pyranopterin monophosphate synthase subunit MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: SAMN05443637_105163
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: SAMN05443637_105167
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: SAMN05443637_105175
symbol: ectC
gene_biotype: protein_coding
description:
  Ectoine synthase; Catalyzes the circularization of gamma-N-acetyl-alpha,gamma- diaminobutyric acid (ADABA) to ectoine (1,4,5,6-tetrahydro-2-methyl-4- pyrimidine carboxylic acid), which is an excellent osmoprotectant.


ensembl_gene_id: SAMN05443637_105176
symbol: SHK36405.1
gene_biotype: protein_coding
description:
  Diaminobutyrate aminotransferase apoenzyme; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05443637_105177
symbol: ectA
gene_biotype: protein_coding
description:
  Diaminobutyrate acetyltransferase; Catalyzes the acetylation of L-2,4-diaminobutyrate (DABA) to gamma-N-acetyl-alpha,gamma-diaminobutyric acid (ADABA) with acetyl coenzyme A.


ensembl_gene_id: SAMN05443637_105199
symbol: maiA
gene_biotype: protein_coding
description:
  Maleate isomerase; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate.


ensembl_gene_id: SAMN05443637_105209
symbol: rbsK
gene_biotype: protein_coding
description:
  Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.


ensembl_gene_id: SAMN05443637_10523
symbol: SHK32565.1
gene_biotype: protein_coding
description:
  Molybdopterin molybdotransferase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN05443637_105230
symbol: SHK37620.1
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: SAMN05443637_105243
symbol: SHK37952.1
gene_biotype: protein_coding
description:
  iron(III) transport system ATP-binding protein/putative spermidine/putrescine transport system ATP-binding protein/spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.


ensembl_gene_id: SAMN05443637_10528
symbol: mscL
gene_biotype: protein_coding
description:
  Large conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: SAMN05443637_10569
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN05443637_10579
symbol: glmU
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: SAMN05443637_10580
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: SAMN05443637_10584
symbol: rplY
gene_biotype: protein_coding
description:
  LSU ribosomal protein L25P; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: SAMN05443637_10585
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase, PTH1 family; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: SAMN05443637_10591
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: SAMN05443637_10594
symbol: rsmA
gene_biotype: protein_coding
description:
  16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: SAMN05443637_10597
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: SAMN05443637_106137
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: SAMN05443637_106140
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.


ensembl_gene_id: SAMN05443637_106145
symbol: recR
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: SAMN05443637_106146
symbol: SHK44094.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: SAMN05443637_106148
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III, tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: SAMN05443637_106162
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA-adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN05443637_106170
symbol: ku
gene_biotype: protein_coding
description:
  DNA end-binding protein Ku; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.


ensembl_gene_id: SAMN05443637_106238
symbol: pat
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase; May catalyze the transamination reaction in phenylalanine biosynthesis; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05443637_106256
symbol: SHK46382.1
gene_biotype: protein_coding
description:
  rhamnopyranosyl-N-acetylglucosaminyl-diphospho- decaprenol beta-1,3/1,4-galactofuranosyltransferase.


ensembl_gene_id: SAMN05443637_10627
symbol: SHK41675.1
gene_biotype: protein_coding
description:
  Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: SAMN05443637_106272
symbol: SHK46696.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.


ensembl_gene_id: SAMN05443637_106273
symbol: SHK46716.1
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: SAMN05443637_106274
symbol: SHK46735.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: SAMN05443637_106276
symbol: SHK46773.1
gene_biotype: protein_coding
description:
  galactofuranosylgalactofuranosylrhamnosyl-N- acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase.


ensembl_gene_id: SAMN05443637_10631
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: SAMN05443637_10633
symbol: SHK41783.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter membrane protein 1, PhoT family; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: SAMN05443637_10634
symbol: SHK41806.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter substrate-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.


ensembl_gene_id: SAMN05443637_10635
symbol: mshD
gene_biotype: protein_coding
description:
  Mycothiol synthase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol.


ensembl_gene_id: SAMN05443637_10663
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: SAMN05443637_10666
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist in  [...]


ensembl_gene_id: SAMN05443637_10675
symbol: SHK42564.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: SAMN05443637_10683
symbol: acsA
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: SAMN05443637_10695
symbol: hppA
gene_biotype: protein_coding
description:
  K(+)-stimulated pyrophosphate-energized sodium pump; Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force.


ensembl_gene_id: SAMN05443637_10699
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: SAMN05443637_10710
symbol: SHK49256.1
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.


ensembl_gene_id: SAMN05443637_107102
symbol: SHK50973.1
gene_biotype: protein_coding
description:
  LysR family transcriptional regulator, glycine cleavage system transcriptional activator; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: SAMN05443637_107115
symbol: SHK51229.1
gene_biotype: protein_coding
description:
  Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family.


ensembl_gene_id: SAMN05443637_107121
symbol: SHK51343.1
gene_biotype: protein_coding
description:
  3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; In the N-terminal section; belongs to the DHBP synthase family.


ensembl_gene_id: SAMN05443637_10715
symbol: xerD
gene_biotype: protein_coding
description:
  Integrase/recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: SAMN05443637_107158
symbol: SHK52056.1
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN05443637_10717
symbol: SHK49393.1
gene_biotype: protein_coding
description:
  Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: SAMN05443637_10718
symbol: SHK49416.1
gene_biotype: protein_coding
description:
  Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: SAMN05443637_10723
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: SAMN05443637_107230
symbol: SHK53435.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN05443637_107231
symbol: SHK53453.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN05443637_107248
symbol: SHK53763.1
gene_biotype: protein_coding
description:
  Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN05443637_10757
symbol: SHK50125.1
gene_biotype: protein_coding
description:
  Haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.


ensembl_gene_id: SAMN05443637_1076
symbol: nadK
gene_biotype: protein_coding
description:
  NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: SAMN05443637_10787
symbol: SHK50665.1
gene_biotype: protein_coding
description:
  Trimethylamine---corrinoid protein Co-methyltransferase; Belongs to the trimethylamine methyltransferase family.


ensembl_gene_id: SAMN05443637_10791
symbol: SHK50741.1
gene_biotype: protein_coding
description:
  Methylenetetrahydrofolate reductase (NADPH); Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: SAMN05443637_108102
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: SAMN05443637_108103
symbol: hpf
gene_biotype: protein_coding
description:
  Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: SAMN05443637_108111
symbol: ahcY
gene_biotype: protein_coding
description:
  Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: SAMN05443637_108128
symbol: whiB
gene_biotype: protein_coding
description:
  WhiB family transcriptional regulator, redox-sensing transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.


ensembl_gene_id: SAMN05443637_108147
symbol: purE
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: SAMN05443637_108148
symbol: purK
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: SAMN05443637_108155
symbol: SHK58614.1
gene_biotype: protein_coding
description:
  BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase.


ensembl_gene_id: SAMN05443637_108159
symbol: SHK58698.1
gene_biotype: protein_coding
description:
  Septum formation protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: SAMN05443637_108188
symbol: SHK59265.1
gene_biotype: protein_coding
description:
  Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: SAMN05443637_10819
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol 3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN05443637_108194
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: SAMN05443637_10821
symbol: fbiD
gene_biotype: protein_coding
description:
  2-phospho-L-lactate guanylyltransferase; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor.


ensembl_gene_id: SAMN05443637_10842
symbol: SHK56311.1
gene_biotype: protein_coding
description:
  Peptide/nickel transport system ATP-binding protein/oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.


ensembl_gene_id: SAMN05443637_10850
symbol: SHK56466.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN05443637_10852
symbol: SHK56503.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family /amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.


ensembl_gene_id: SAMN05443637_1088
symbol: SHK55653.1
gene_biotype: protein_coding
description:
  Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family; Belongs to the LDH2/MDH2 oxidoreductase family.


ensembl_gene_id: SAMN05443637_10884
symbol: whiB-2
gene_biotype: protein_coding
description:
  Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.


ensembl_gene_id: SAMN05443637_10888
symbol: SHK57198.1
gene_biotype: protein_coding
description:
  Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.


ensembl_gene_id: SAMN05443637_10890
symbol: SHK57243.1
gene_biotype: protein_coding
description:
  Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family.


ensembl_gene_id: SAMN05443637_10892
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: SAMN05443637_10893
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: SAMN05443637_10898
symbol: SHK57402.1
gene_biotype: protein_coding
description:
  23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN05443637_109112
symbol: SHK63784.1
gene_biotype: protein_coding
description:
  Biotin/methionine sulfoxide reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN05443637_109138
symbol: SHK64284.1
gene_biotype: protein_coding
description:
  Gluconate 5-dehydrogenase/2-hydroxycyclohexanecarboxyl-CoA dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN05443637_109166
symbol: SHK64793.1
gene_biotype: protein_coding
description:
  HAD-superfamily subfamily IB hydrolase, TIGR01490; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.


ensembl_gene_id: SAMN05443637_109180
symbol: SHK65014.1
gene_biotype: protein_coding
description:
  NitT/TauT family transport system permease protein/putative hydroxymethylpyrimidine transport system permease protein.


ensembl_gene_id: SAMN05443637_109185
symbol: SHK65101.1
gene_biotype: protein_coding
description:
  Atrazine chlorohydrolase/5-methylthioadenosine/S- adenosylhomocysteine deaminase/melamine deaminase.


ensembl_gene_id: SAMN05443637_109186
symbol: kynA
gene_biotype: protein_coding
description:
  Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.


ensembl_gene_id: SAMN05443637_109187
symbol: SHK65138.1
gene_biotype: protein_coding
description:
  Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.


ensembl_gene_id: SAMN05443637_10931
symbol: SHK62109.1
gene_biotype: protein_coding
description:
  NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN05443637_1094
symbol: SHK61551.1
gene_biotype: protein_coding
description:
  Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: SAMN05443637_10950
symbol: SHK62497.1
gene_biotype: protein_coding
description:
  Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.


ensembl_gene_id: SAMN05443637_10951
symbol: thyA
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: SAMN05443637_10958
symbol: SHK62671.1
gene_biotype: protein_coding
description:
  2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: SAMN05443637_10961
symbol: SHK62742.1
gene_biotype: protein_coding
description:
  phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).


ensembl_gene_id: SAMN05443637_10978
symbol: SHK63131.1
gene_biotype: protein_coding
description:
  Sodium:solute symporter family protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: SAMN05443637_110117
symbol: map
gene_biotype: protein_coding
description:
  Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: SAMN05443637_110143
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: SAMN05443637_110144
symbol: SHK69786.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4).


ensembl_gene_id: SAMN05443637_110146
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: SAMN05443637_110147
symbol: SHK69846.1
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: SAMN05443637_110149
symbol: ftsH
gene_biotype: protein_coding
description:
  Membrane protease FtsH catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: SAMN05443637_110151
symbol: SHK69917.1
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: SAMN05443637_110152
symbol: SHK69933.1
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: SAMN05443637_110157
symbol: panC
gene_biotype: protein_coding
description:
  Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: SAMN05443637_110158
symbol: panD
gene_biotype: protein_coding
description:
  L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: SAMN05443637_110159
symbol: coaX
gene_biotype: protein_coding
description:
  Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: SAMN05443637_110196
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA/Sms; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: SAMN05443637_110200
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: SAMN05443637_11021
symbol: SHK67482.1
gene_biotype: protein_coding
description:
  Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family.


ensembl_gene_id: SAMN05443637_110210
symbol: SHK70941.1
gene_biotype: protein_coding
description:
  Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.


ensembl_gene_id: SAMN05443637_11051
symbol: SHK68059.1
gene_biotype: protein_coding
description:
  Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: SAMN05443637_11073
symbol: SHK68574.1
gene_biotype: protein_coding
description:
  Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain-containing protein; Belongs to the ABC transporter superfamily.


ensembl_gene_id: SAMN05443637_111100
symbol: SHK74487.1
gene_biotype: protein_coding
description:
  Glutathione peroxidase, house-cleaning role in reducing lipid peroxides; Belongs to the glutathione peroxidase family.


ensembl_gene_id: SAMN05443637_111106
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: SAMN05443637_111131
symbol: SHK75128.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: SAMN05443637_11137
symbol: aat
gene_biotype: protein_coding
description:
  leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: SAMN05443637_1119
symbol: purU
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).


ensembl_gene_id: SAMN05443637_11199
symbol: SHK74468.1
gene_biotype: protein_coding
description:
  Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.


ensembl_gene_id: SAMN05443637_112121
symbol: SHK80823.1
gene_biotype: protein_coding
description:
  Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN05443637_112148
symbol: rpsR
gene_biotype: protein_coding
description:
  SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: SAMN05443637_112150
symbol: SHK81345.1
gene_biotype: protein_coding
description:
  Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: SAMN05443637_112160
symbol: SHK81526.1
gene_biotype: protein_coding
description:
  Nitric-oxide synthase; Catalyzes the production of nitric oxide. Belongs to the NOS family. Bacterial NOS oxygenase subfamily.


ensembl_gene_id: SAMN05443637_112161
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: SAMN05443637_112173
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: SAMN05443637_112179
symbol: SHK81876.1
gene_biotype: protein_coding
description:
  Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.


ensembl_gene_id: SAMN05443637_112191
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: SAMN05443637_112194
symbol: clpB
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: SAMN05443637_112199
symbol: grpE
gene_biotype: protein_coding
description:
  Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...]


ensembl_gene_id: SAMN05443637_11230
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: SAMN05443637_11262
symbol: SHK79515.1
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase A (cyclophilin A); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: SAMN05443637_11283
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN05443637_11284
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN05443637_11286
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: SAMN05443637_11288
symbol: SHK80056.1
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...]


ensembl_gene_id: SAMN05443637_11290
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: SAMN05443637_11292
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: SAMN05443637_11293
symbol: SHK80180.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: SAMN05443637_11296
symbol: rsmG
gene_biotype: protein_coding
description:
  16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: SAMN05443637_11310
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: SAMN05443637_113101
symbol: SHK85943.1
gene_biotype: protein_coding
description:
  5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: SAMN05443637_113109
symbol: SHK86096.1
gene_biotype: protein_coding
description:
  Protein of unknown function; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA.


ensembl_gene_id: SAMN05443637_113128
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: SAMN05443637_113166
symbol: cobQ
gene_biotype: protein_coding
description:
  Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: SAMN05443637_113168
symbol: cobD
gene_biotype: protein_coding
description:
  Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: SAMN05443637_113184
symbol: SHK87690.1
gene_biotype: protein_coding
description:
  3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.


ensembl_gene_id: SAMN05443637_1132
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: SAMN05443637_11321
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.


ensembl_gene_id: SAMN05443637_1133
symbol: SHK83950.1
gene_biotype: protein_coding
description:
  Oxygen-dependent protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.


ensembl_gene_id: SAMN05443637_11332
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: SAMN05443637_11333
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: SAMN05443637_11334
symbol: trpB-2
gene_biotype: protein_coding
description:
  Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: SAMN05443637_11337
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase component 1; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...]


ensembl_gene_id: SAMN05443637_1134
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: SAMN05443637_11340
symbol: hisI
gene_biotype: protein_coding
description:
  phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.


ensembl_gene_id: SAMN05443637_11341
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit hisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: SAMN05443637_11342
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.


ensembl_gene_id: SAMN05443637_11344
symbol: hisH
gene_biotype: protein_coding
description:
  Glutamine amidotransferase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: SAMN05443637_11346
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: SAMN05443637_11347
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: SAMN05443637_11350
symbol: SHK84865.1
gene_biotype: protein_coding
description:
  Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: SAMN05443637_11365
symbol: SHK85197.1
gene_biotype: protein_coding
description:
  23S rRNA pseudouridine1911/1915/1917 synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: SAMN05443637_11366
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: SAMN05443637_11370
symbol: ileS
gene_biotype: protein_coding
description:
  Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.


ensembl_gene_id: SAMN05443637_11374
symbol: sepF
gene_biotype: protein_coding
description:
  Cell division inhibitor SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.


ensembl_gene_id: SAMN05443637_11375
symbol: SHK85450.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: SAMN05443637_11377
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: SAMN05443637_11380
symbol: murG
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: SAMN05443637_11382
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: SAMN05443637_11383
symbol: mraY
gene_biotype: protein_coding
description:
  Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: SAMN05443637_11384
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: SAMN05443637_11385
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: SAMN05443637_11388
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA (cytosine1402-N4)-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: SAMN05443637_114106
symbol: SHK91671.1
gene_biotype: protein_coding
description:
  ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: SAMN05443637_114108
symbol: SHK91706.1
gene_biotype: protein_coding
description:
  4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05443637_11411
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: SAMN05443637_114116
symbol: tatB
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.


ensembl_gene_id: SAMN05443637_11412
symbol: SHK89733.1
gene_biotype: protein_coding
description:
  Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: SAMN05443637_114122
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: SAMN05443637_11413
symbol: ftsE
gene_biotype: protein_coding
description:
  Cell division transport system ATP-binding protein; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: SAMN05443637_114137
symbol: dapD
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA.


ensembl_gene_id: SAMN05443637_11414
symbol: prfB
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 2 (bRF-2); Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: SAMN05443637_114140
symbol: SHK92359.1
gene_biotype: protein_coding
description:
  NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: SAMN05443637_114143
symbol: mshB
gene_biotype: protein_coding
description:
  N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha- D-glucopyranoside deacetylase; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway.


ensembl_gene_id: SAMN05443637_114162
symbol: SHK92830.1
gene_biotype: protein_coding
description:
  3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).


ensembl_gene_id: SAMN05443637_114173
symbol: ychF
gene_biotype: protein_coding
description:
  Hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: SAMN05443637_114180
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: SAMN05443637_114182
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: SAMN05443637_114183
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: SAMN05443637_114187
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: SAMN05443637_114190
symbol: lig
gene_biotype: protein_coding
description:
  DNA ligase-1; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair.


ensembl_gene_id: SAMN05443637_114195
symbol: SHK93477.1
gene_biotype: protein_coding
description:
  Short-chain Z-isoprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: SAMN05443637_1146
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: SAMN05443637_11471
symbol: SHK91025.1
gene_biotype: protein_coding
description:
  Nitrite reductase (NADH) large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: SAMN05443637_11473
symbol: SHK91048.1
gene_biotype: protein_coding
description:
  Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN05443637_115106
symbol: smc
gene_biotype: protein_coding
description:
  Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: SAMN05443637_11527
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine-phosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: SAMN05443637_11542
symbol: SHK95814.1
gene_biotype: protein_coding
description:
  Uncharacterized protein; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase/hypothetical protein.


ensembl_gene_id: SAMN05443637_11569
symbol: glcB
gene_biotype: protein_coding
description:
  Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.


ensembl_gene_id: SAMN05443637_11575
symbol: ung
gene_biotype: protein_coding
description:
  Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: SAMN05443637_11581
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN05443637_11583
symbol: SHK96707.1
gene_biotype: protein_coding
description:
  Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.


ensembl_gene_id: SAMN05443637_11585
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: SAMN05443637_11593
symbol: rnc
gene_biotype: protein_coding
description:
  RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: SAMN05443637_11594
symbol: mutM
gene_biotype: protein_coding
description:
  DNA-(apurinic or apyrimidinic site) lyase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: SAMN05443637_11596
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium transporter; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: SAMN05443637_116111
symbol: rplA
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: SAMN05443637_116112
symbol: rplK
gene_biotype: protein_coding
description:
  LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: SAMN05443637_116113
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: SAMN05443637_116114
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: SAMN05443637_116126
symbol: SHL02727.1
gene_biotype: protein_coding
description:
  Thiaminase; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family.


ensembl_gene_id: SAMN05443637_11613
symbol: groS
gene_biotype: protein_coding
description:
  Chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: SAMN05443637_116132
symbol: mca
gene_biotype: protein_coding
description:
  Mycothiol S-conjugate amidase; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily.


ensembl_gene_id: SAMN05443637_116133
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: SAMN05443637_11615
symbol: tsaD
gene_biotype: protein_coding
description:
  O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: SAMN05443637_11616
symbol: SHL00546.1
gene_biotype: protein_coding
description:
  Ribosomal-protein-alanine N-acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.


ensembl_gene_id: SAMN05443637_116170
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: SAMN05443637_116174
symbol: SHL03781.1
gene_biotype: protein_coding
description:
  Deferrochelatase/peroxidase EfeB; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.


ensembl_gene_id: SAMN05443637_11620
symbol: SHL00628.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: SAMN05443637_11621
symbol: nnrD
gene_biotype: protein_coding
description:
  yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specif [...]


ensembl_gene_id: SAMN05443637_11625
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: SAMN05443637_11627
symbol: rplM
gene_biotype: protein_coding
description:
  LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: SAMN05443637_11641
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: SAMN05443637_11643
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN05443637_11644
symbol: rpsD
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: SAMN05443637_11645
symbol: rpsK
gene_biotype: protein_coding
description:
  SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: SAMN05443637_11646
symbol: rpsM
gene_biotype: protein_coding
description:
  SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: SAMN05443637_11648
symbol: infA-2
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 1 (bIF-1); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: SAMN05443637_1165
symbol: guaB
gene_biotype: protein_coding
description:
  IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: SAMN05443637_11650
symbol: SHL01245.1
gene_biotype: protein_coding
description:
  NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.


ensembl_gene_id: SAMN05443637_11653
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: SAMN05443637_11654
symbol: secY
gene_biotype: protein_coding
description:
  Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: SAMN05443637_11655
symbol: rplO
gene_biotype: protein_coding
description:
  LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: SAMN05443637_11657
symbol: rpsE
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: SAMN05443637_11658
symbol: rplR
gene_biotype: protein_coding
description:
  LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: SAMN05443637_11659
symbol: rplF
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: SAMN05443637_11660
symbol: rpsH
gene_biotype: protein_coding
description:
  SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: SAMN05443637_11661
symbol: rpsZ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.


ensembl_gene_id: SAMN05443637_11662
symbol: rplE
gene_biotype: protein_coding
description:
  LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: SAMN05443637_11663
symbol: rplX
gene_biotype: protein_coding
description:
  LSU ribosomal protein L24P; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: SAMN05443637_11664
symbol: rplN
gene_biotype: protein_coding
description:
  LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: SAMN05443637_11665
symbol: rpsQ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: SAMN05443637_11667
symbol: rplP
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: SAMN05443637_11668
symbol: rpsC
gene_biotype: protein_coding
description:
  SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: SAMN05443637_11669
symbol: rplV
gene_biotype: protein_coding
description:
  LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: SAMN05443637_11670
symbol: rpsS
gene_biotype: protein_coding
description:
  SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: SAMN05443637_11671
symbol: rplB
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: SAMN05443637_11672
symbol: rplW
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: SAMN05443637_11674
symbol: rplC
gene_biotype: protein_coding
description:
  LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: SAMN05443637_11675
symbol: rpsJ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: SAMN05443637_11676
symbol: tuf
gene_biotype: protein_coding
description:
  Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: SAMN05443637_11677
symbol: fusA
gene_biotype: protein_coding
description:
  Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: SAMN05443637_11678
symbol: rpsG
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: SAMN05443637_11679
symbol: rpsL
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: SAMN05443637_11681
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN05443637_11683
symbol: rplL
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: SAMN05443637_11684
symbol: rplJ
gene_biotype: protein_coding
description:
  LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: SAMN05443637_117110
symbol: SHL07554.1
gene_biotype: protein_coding
description:
  benzoylsuccinyl-CoA thiolase BbsB subunit; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: SAMN05443637_117139
symbol: SHL08085.1
gene_biotype: protein_coding
description:
  Peptide/nickel transport system ATP-binding protein/oligopeptide transport system ATP-binding protein.


ensembl_gene_id: SAMN05443637_11724
symbol: SHL05811.1
gene_biotype: protein_coding
description:
  L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.


ensembl_gene_id: SAMN05443637_1176
symbol: SHL05389.1
gene_biotype: protein_coding
description:
  Dinuclear metal center protein, YbgI/SA1388 family; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.


ensembl_gene_id: SAMN05443637_11761
symbol: SHL06619.1
gene_biotype: protein_coding
description:
  GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex.


ensembl_gene_id: SAMN05443637_118120
symbol: SHL11810.1
gene_biotype: protein_coding
description:
  Putative ABC transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN05443637_11813
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: SAMN05443637_118137
symbol: SHL12149.1
gene_biotype: protein_coding
description:
  4Fe-4S binding domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: SAMN05443637_11814
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: SAMN05443637_118151
symbol: SHL12437.1
gene_biotype: protein_coding
description:
  Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN05443637_11816
symbol: rplT
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: SAMN05443637_11818
symbol: infC
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: SAMN05443637_11821
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: SAMN05443637_11824
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: SAMN05443637_11840
symbol: SHL10245.1
gene_biotype: protein_coding
description:
  SDR family mycofactocin-dependent oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN05443637_1185
symbol: SHL09484.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: SAMN05443637_11856
symbol: SHL10566.1
gene_biotype: protein_coding
description:
  Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.


ensembl_gene_id: SAMN05443637_1186
symbol: argD
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: SAMN05443637_11863
symbol: gvpA
gene_biotype: protein_coding
description:
  Gas vesicle protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure.


ensembl_gene_id: SAMN05443637_11867
symbol: SHL10756.1
gene_biotype: protein_coding
description:
  Gas vesicle protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth.


ensembl_gene_id: SAMN05443637_1187
symbol: argB
gene_biotype: protein_coding
description:
  N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: SAMN05443637_1188
symbol: argJ
gene_biotype: protein_coding
description:
  Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: SAMN05443637_1189
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: SAMN05443637_119106
symbol: mshA
gene_biotype: protein_coding
description:
  D-inositol-3-phosphate glycosyltransferase; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2- deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.


ensembl_gene_id: SAMN05443637_119116
symbol: SHL15749.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: SAMN05443637_119125
symbol: SHL15938.1
gene_biotype: protein_coding
description:
  Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: SAMN05443637_119128
symbol: moaA
gene_biotype: protein_coding
description:
  Cyclic pyranopterin phosphate synthase; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: SAMN05443637_11929
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: SAMN05443637_11932
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: SAMN05443637_11933
symbol: SHL14249.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: SAMN05443637_11934
symbol: nuoI
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: SAMN05443637_11935
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: SAMN05443637_11936
symbol: SHL14316.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.


ensembl_gene_id: SAMN05443637_11937
symbol: SHL14328.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.


ensembl_gene_id: SAMN05443637_11939
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: SAMN05443637_11940
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: SAMN05443637_11941
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: SAMN05443637_11942
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: SAMN05443637_11944
symbol: menG
gene_biotype: protein_coding
description:
  Demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).


ensembl_gene_id: SAMN05443637_11949
symbol: menD
gene_biotype: protein_coding
description:
  2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily.


ensembl_gene_id: SAMN05443637_11955
symbol: menB
gene_biotype: protein_coding
description:
  1,4-Dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.


ensembl_gene_id: SAMN05443637_11959
symbol: menA
gene_biotype: protein_coding
description:
  1,4-dihydroxy-2-naphthoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.


ensembl_gene_id: SAMN05443637_11977
symbol: hemC
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: SAMN05443637_11978
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: SAMN05443637_11979
symbol: rex
gene_biotype: protein_coding
description:
  Redox-sensing transcriptional repressor; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: SAMN05443637_11991
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: SAMN05443637_11998
symbol: gpmA
gene_biotype: protein_coding
description:
  2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: SAMN05443637_12018
symbol: SHL17728.1
gene_biotype: protein_coding
description:
  Precorrin-4/cobalt-precorrin-4 C11-methyltransferase; Belongs to the precorrin methyltransferase family.


ensembl_gene_id: SAMN05443637_12053
symbol: SHL18324.1
gene_biotype: protein_coding
description:
  Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. Belongs to the chaperonin (HSP60) family.


ensembl_gene_id: SAMN05443637_12068
symbol: pdxH
gene_biotype: protein_coding
description:
  Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).


ensembl_gene_id: SAMN05443637_12072
symbol: serC
gene_biotype: protein_coding
description:
  Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.


ensembl_gene_id: SAMN05443637_12083
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: SAMN05443637_12089
symbol: crcB
gene_biotype: protein_coding
description:
  Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: SAMN05443637_12110
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease, protease subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: SAMN05443637_12111
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: SAMN05443637_12126
symbol: larC
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family.


ensembl_gene_id: SAMN05443637_1214
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: SAMN05443637_12160
symbol: SHL21558.1
gene_biotype: protein_coding
description:
  Molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.


ensembl_gene_id: SAMN05443637_1218
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: SAMN05443637_1219
symbol: clpP-2
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: SAMN05443637_12198
symbol: SHL22191.1
gene_biotype: protein_coding
description:
  Glutamate-1-semialdehyde 2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05443637_122125
symbol: fdhD
gene_biotype: protein_coding
description:
  FdhD protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.


ensembl_gene_id: SAMN05443637_12257
symbol: pdxS
gene_biotype: protein_coding
description:
  Pyridoxal phosphate synthase yaaD subunit; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.


ensembl_gene_id: SAMN05443637_12269
symbol: pdxT
gene_biotype: protein_coding
description:
  5'-phosphate synthase pdxT subunit; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.


ensembl_gene_id: SAMN05443637_12286
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: SAMN05443637_12289
symbol: ruvC
gene_biotype: protein_coding
description:
  Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: SAMN05443637_12290
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: SAMN05443637_12291
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: SAMN05443637_12293
symbol: secD
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: SAMN05443637_12294
symbol: secF
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: SAMN05443637_12295
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: SAMN05443637_12296
symbol: SHL25664.1
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: SAMN05443637_12310
symbol: SHL27477.1
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: SAMN05443637_123103
symbol: SHL29291.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: SAMN05443637_123105
symbol: SHL29325.1
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.


ensembl_gene_id: SAMN05443637_123110
symbol: SHL29416.1
gene_biotype: protein_coding
description:
  Aerobic C4-dicarboxylate transport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: SAMN05443637_12313
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: SAMN05443637_12316
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: SAMN05443637_12318
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: SAMN05443637_12320
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: SAMN05443637_12326
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]


ensembl_gene_id: SAMN05443637_1233
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: SAMN05443637_12330
symbol: metXA
gene_biotype: protein_coding
description:
  Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.


ensembl_gene_id: SAMN05443637_12345
symbol: map-3
gene_biotype: protein_coding
description:
  Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: SAMN05443637_12353
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: SAMN05443637_12355
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: SAMN05443637_1236
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: SAMN05443637_12364
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: SAMN05443637_12369
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: SAMN05443637_12371
symbol: tsf
gene_biotype: protein_coding
description:
  Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: SAMN05443637_12374
symbol: SHL28779.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN05443637_12375
symbol: xerC
gene_biotype: protein_coding
description:
  Integrase/recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: SAMN05443637_1238
symbol: rpsO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: SAMN05443637_12382
symbol: rplS
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: SAMN05443637_12383
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine37-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: SAMN05443637_12389
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: SAMN05443637_12393
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: SAMN05443637_12396
symbol: glnD
gene_biotype: protein_coding
description:
  UTP--GlnB (protein PII) uridylyltransferase, GlnD; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.


ensembl_gene_id: SAMN05443637_12399
symbol: ftsY
gene_biotype: protein_coding
description:
  Fused signal recognition particle receptor; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: SAMN05443637_12411
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: SAMN05443637_12429
symbol: dapA
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: SAMN05443637_12443
symbol: SHL31289.1
gene_biotype: protein_coding
description:
  tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: SAMN05443637_12451
symbol: dut
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: SAMN05443637_12457
symbol: sigA
gene_biotype: protein_coding
description:
  RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: SAMN05443637_1246
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: SAMN05443637_125112
symbol: SHL36554.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier protein] reductase/2-[hydroxy(phenyl)methyl]-succinyl-CoA dehydrogenase BbsD subunit.


ensembl_gene_id: SAMN05443637_12519
symbol: bioD
gene_biotype: protein_coding
description:
  Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: SAMN05443637_12522
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: SAMN05443637_1253
symbol: thyX
gene_biotype: protein_coding
description:
  Thymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: SAMN05443637_1256
symbol: rnj
gene_biotype: protein_coding
description:
  Ribonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: SAMN05443637_12619
symbol: pxpA
gene_biotype: protein_coding
description:
  UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.


ensembl_gene_id: SAMN05443637_12625
symbol: cobB-2
gene_biotype: protein_coding
description:
  NAD-dependent protein deacetylase, SIR2 family; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.


ensembl_gene_id: SAMN05443637_12635
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: SAMN05443637_12638
symbol: fbpC
gene_biotype: protein_coding
description:
  iron(III) transport system ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.


ensembl_gene_id: SAMN05443637_12653
symbol: SHL38503.1
gene_biotype: protein_coding
description:
  Glucosyl-3-phosphoglycerate phosphatase (pgm family); Belongs to the phosphoglycerate mutase family.


ensembl_gene_id: SAMN05443637_12654
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: SAMN05443637_12656
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: SAMN05443637_12672
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: SAMN05443637_12673
symbol: obg
gene_biotype: protein_coding
description:
  GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: SAMN05443637_12675
symbol: rplU
gene_biotype: protein_coding
description:
  LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: SAMN05443637_1269
symbol: SHL37638.1
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: SAMN05443637_12716
symbol: sucC
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: SAMN05443637_12717
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: SAMN05443637_12721
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase-1; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: SAMN05443637_12724
symbol: SHL40266.1
gene_biotype: protein_coding
description:
  23S rRNA (adenine-N6)-dimethyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.


ensembl_gene_id: SAMN05443637_12744
symbol: dnaE2
gene_biotype: protein_coding
description:
  Error-prone DNA polymerase, DnaE-like; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.


ensembl_gene_id: SAMN05443637_12746
symbol: folD
gene_biotype: protein_coding
description:
  Methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: SAMN05443637_12758
symbol: SHL40955.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.


ensembl_gene_id: SAMN05443637_12767
symbol: add
gene_biotype: protein_coding
description:
  Adenosine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family. Adenosine deaminase subfamily.


ensembl_gene_id: SAMN05443637_12775
symbol: SHL41314.1
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate.


ensembl_gene_id: SAMN05443637_12835
symbol: SHL42687.1
gene_biotype: protein_coding
description:
  Biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: SAMN05443637_12847
symbol: SHL42941.1
gene_biotype: protein_coding
description:
  Urea ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN05443637_12860
symbol: SHL43188.1
gene_biotype: protein_coding
description:
  5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.


ensembl_gene_id: SAMN05443637_12911
symbol: dcd
gene_biotype: protein_coding
description:
  dCTP deaminase; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate.


ensembl_gene_id: SAMN05443637_12937
symbol: SHL44868.1
gene_biotype: protein_coding
description:
  Chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter; Belongs to the GroES chaperonin family.


ensembl_gene_id: SAMN05443637_12948
symbol: SHL45127.1
gene_biotype: protein_coding
description:
  Uncharacterized peroxidase-related enzyme; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: SAMN05443637_12951
symbol: pckG
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase (GTP); Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family.


ensembl_gene_id: SAMN05443637_13065
symbol: SHL47528.1
gene_biotype: protein_coding
description:
  Site-specific DNA-methyltransferase (adenine-specific); Belongs to the N(4)/N(6)-methyltransferase family.


ensembl_gene_id: SAMN05443637_13221
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP-dependent clade 'X' sub-subfamily.


ensembl_gene_id: SAMN05443637_13315
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: SAMN05443637_13316
symbol: SHL50983.1
gene_biotype: protein_coding
description:
  XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: SAMN05443637_13317
symbol: SHL51012.1
gene_biotype: protein_coding
description:
  4-carboxymuconolactone decarboxylase/3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase.


ensembl_gene_id: SAMN05443637_1338
symbol: SHL50792.1
gene_biotype: protein_coding
description:
  Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.


# pathwayInfo

id: CL:10018
description: Mixed, incl. Endoribonuclease L-PSP/chorismate mutase-like, and XdhC Rossmann domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10018_Mixed,_incl._Endoribonuclease_L-PSP/chorismate_mutase-like,_and_XdhC_Rossmann_domain


id: CL:10039
description: Mixed, incl. Furfural degradation, and Biosynthesis of enediyne antibiotics
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10039_Mixed,_incl._Furfural_degradation,_and_Biosynthesis_of_enediyne_antibiotics


id: CL:10048
description: Mixed, incl. Purine catabolism PurC-like domain, and CO dehydrogenase flavoprotein, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10048_Mixed,_incl._Purine_catabolism_PurC-like_domain,_and_CO_dehydrogenase_flavoprotein,_C-terminal


id: CL:10064
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10064_Mixed,_incl._Carbon-monoxide_dehydrogenase,_large_subunit,_and_CO_dehydrogenase_flavoprotein,_C-terminal

description:
  Mixed, incl. Carbon-monoxide dehydrogenase, large subunit, and CO dehydrogenase flavoprotein, C-terminal


id: CL:10082
description: Mixed, incl. XdhC- CoxI, and Carbon-monoxide dehydrogenase, large subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10082_Mixed,_incl._XdhC-_CoxI,_and_Carbon-monoxide_dehydrogenase,_large_subunit


id: CL:10095
description: Mixed, incl. Cell motility, and ATPase, dynein-related, AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10095_Mixed,_incl._Cell_motility,_and_ATPase,_dynein-related,_AAA_domain


id: CL:10108
description: Uncharacterised conserved protein UCP010256, and ATPase, dynein-related, AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10108_Uncharacterised_conserved_protein_UCP010256,_and_ATPase,_dynein-related,_AAA_domain


id: CL:10109
description: Mixed, incl. Uncharacterised conserved protein UCP010256, and ATPase, dynein-related, AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10109_Mixed,_incl._Uncharacterised_conserved_protein_UCP010256,_and_ATPase,_dynein-related,_AAA_domain


id: CL:1011
description: Mixed, incl. Cell projection organization, and Phenylacetate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1011_Mixed,_incl._Cell_projection_organization,_and_Phenylacetate_catabolic_process


id: CL:10122
description: Uncharacterised conserved protein UCP010256, and ATPase, dynein-related, AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10122_Uncharacterised_conserved_protein_UCP010256,_and_ATPase,_dynein-related,_AAA_domain


id: CL:10132
description: Mixed, incl. Uncharacterised conserved protein UCP010256, and ATPase, dynein-related, AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10132_Mixed,_incl._Uncharacterised_conserved_protein_UCP010256,_and_ATPase,_dynein-related,_AAA_domain


id: CL:10142
description: Mostly uncharacterized, incl. MmgE/PrpD, and Hydroxyacid-oxoacid transhydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10142_Mostly_uncharacterized,_incl._MmgE/PrpD,_and_Hydroxyacid-oxoacid_transhydrogenase


id: CL:10143
description: Mixed, incl. MmgE/PrpD, and Hydroxyacid-oxoacid transhydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10143_Mixed,_incl._MmgE/PrpD,_and_Hydroxyacid-oxoacid_transhydrogenase


id: CL:10146
description: Mixed, incl. Hydroxyacid-oxoacid transhydrogenase, and GMC oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10146_Mixed,_incl._Hydroxyacid-oxoacid_transhydrogenase,_and_GMC_oxidoreductase


id: CL:10162
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10162_Mixed,_incl._Biosynthesis_of_type_II_polyketide_products,_and_Periplasmic_binding_protein-like_domain

description:
  Mixed, incl. Biosynthesis of type II polyketide products, and Periplasmic binding protein-like domain


id: CL:10174
description: Mixed, incl. Tryptophan catabolic process, and Lysine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10174_Mixed,_incl._Tryptophan_catabolic_process,_and_Lysine_catabolic_process


id: CL:10176
description: Arylformamidase activity, and HTH-type transcriptional repressor KstR2, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10176_Arylformamidase_activity,_and_HTH-type_transcriptional_repressor_KstR2,_C-terminal


id: CL:10191
description: Mixed, incl. Tryptophan 2,3-dioxygenase, and Quinolinate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10191_Mixed,_incl._Tryptophan_2,3-dioxygenase,_and_Quinolinate_metabolic_process


id: CL:102
description: Mixed, incl. Valine, leucine and isoleucine degradation, and Fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:102_Mixed,_incl._Valine,_leucine_and_isoleucine_degradation,_and_Fatty_acid_metabolic_process


id: CL:10210
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10210_Mixed,_incl._Purine_nucleobase_metabolic_process,_and_6-phosphogluconate_dehydrogenase,_NADP-binding

description:
  Mixed, incl. Purine nucleobase metabolic process, and 6-phosphogluconate dehydrogenase, NADP-binding


id: CL:10211
description: Mixed, incl. Purine nucleobase metabolic process, and 3-hydroxyisobutyrate dehydrogenase-related
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10211_Mixed,_incl._Purine_nucleobase_metabolic_process,_and_3-hydroxyisobutyrate_dehydrogenase-related


id: CL:10213
description: Purine nucleobase metabolic process, and 3-hydroxyisobutyrate dehydrogenase-related
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10213_Purine_nucleobase_metabolic_process,_and_3-hydroxyisobutyrate_dehydrogenase-related


id: CL:10216
description: Microbody, and Allantoin catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10216_Microbody,_and_Allantoin_catabolic_process


id: CL:10236
description: Glyoxylate metabolic process, and D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10236_Glyoxylate_metabolic_process,_and_D-isomer_specific_2-hydroxyacid_dehydrogenase,_catalytic_domain


id: CL:10253
description: Mixed, incl. NodB homology domain, and BioF2-like, acetyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10253_Mixed,_incl._NodB_homology_domain,_and_BioF2-like,_acetyltransferase_domain


id: CL:10264
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10264_Mixed,_incl._6-phosphogluconate_dehydrogenase,_NADP-binding,_and_Carboxymuconolactone_decarboxylase-like

description:
  Mixed, incl. 6-phosphogluconate dehydrogenase, NADP-binding, and Carboxymuconolactone decarboxylase-like


id: CL:10266
description: Mixed, incl. Dipeptidase activity, and EthD domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10266_Mixed,_incl._Dipeptidase_activity,_and_EthD_domain


id: CL:10268
description: Mixed, incl. Dipeptidase activity, and Bacterial regulatory proteins, gntR family
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10268_Mixed,_incl._Dipeptidase_activity,_and_Bacterial_regulatory_proteins,_gntR_family


id: CL:1027
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1027_Mixed,_incl._Phosphotransferase_activity,_paired_acceptors,_and_Beta-ketoacyl_synthase,_N-terminal_domain

description:
  Mixed, incl. Phosphotransferase activity, paired acceptors, and Beta-ketoacyl synthase, N-terminal domain


id: CL:10296
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10296_Mixed,_incl._3-hydroxyisobutyrate_dehydrogenase-like,_NAD-binding_domain,_and_Carboxymuconolactone_decarboxylase-like

description:
  Mixed, incl. 3-hydroxyisobutyrate dehydrogenase-like, NAD-binding domain, and Carboxymuconolactone decarboxylase-like


id: CL:10299
description: Mixed, incl. AraC-like ligand binding domain, and Semialdehyde dehydrogenase, NAD-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10299_Mixed,_incl._AraC-like_ligand_binding_domain,_and_Semialdehyde_dehydrogenase,_NAD-binding


id: CL:103
description: Mixed, incl. Valine, leucine and isoleucine degradation, and Fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:103_Mixed,_incl._Valine,_leucine_and_isoleucine_degradation,_and_Fatty_acid_metabolic_process


id: CL:1030
description: Mixed, incl. Pyruvate, phosphate dikinase, and Beta-ketoacyl synthase, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1030_Mixed,_incl._Pyruvate,_phosphate_dikinase,_and_Beta-ketoacyl_synthase,_N-terminal_domain


id: CL:10315
description: Mixed, incl. Amino acid transport, and LysR, substrate-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10315_Mixed,_incl._Amino_acid_transport,_and_LysR,_substrate-binding


id: CL:10316
description: Amino acid transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10316_Amino_acid_transport,_and_ABC_transporter,_permease


id: CL:10317
description: Amino acid transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10317_Amino_acid_transport,_and_ABC_transporter,_permease


id: CL:10320
description: Branched-chain amino acid transport, and Leucine-binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10320_Branched-chain_amino_acid_transport,_and_Leucine-binding_protein_domain


id: CL:10321
description: Branched-chain amino acid transport, and Leucine-binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10321_Branched-chain_amino_acid_transport,_and_Leucine-binding_protein_domain


id: CL:10322
description: Branched-chain amino acid transport, and Leucine-binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10322_Branched-chain_amino_acid_transport,_and_Leucine-binding_protein_domain


id: CL:10323
description: Branched-chain amino acid transport, and Leu/Ile/Val-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10323_Branched-chain_amino_acid_transport,_and_Leu/Ile/Val-binding_protein


id: CL:10324
description: Branched-chain amino acid transport, and Periplasmic binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10324_Branched-chain_amino_acid_transport,_and_Periplasmic_binding_protein_domain


id: CL:10339
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10339_Leu/Ile/Val-binding_protein,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal

description:
  Leu/Ile/Val-binding protein, and Branched-chain amino acid ATP-binding cassette transporter, C-terminal


id: CL:10348
description: Branched-chain amino acid transport, and Periplasmic binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10348_Branched-chain_amino_acid_transport,_and_Periplasmic_binding_protein_domain


id: CL:10349
description: Branched-chain amino acid transmembrane transporter activity, and Leu/Ile/Val-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10349_Branched-chain_amino_acid_transmembrane_transporter_activity,_and_Leu/Ile/Val-binding_protein


id: CL:10358
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10358_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal,_and_Branched-chain_amino_acid_transport

description:
  Branched-chain amino acid ATP-binding cassette transporter, C-terminal, and Branched-chain amino acid transport


id: CL:10367
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10367_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal,_and_High-affinity_branched-chain_amino_acid_transport_system_permease_protein_LivM-like

description:
  Branched-chain amino acid ATP-binding cassette transporter, C-terminal, and High-affinity branched-chain amino acid transport system permease protein LivM-like


id: CL:10376
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10376_Mixed,_incl._Branched-chain_amino_acid_ATP-binding_cassette_transporter,_and_Leu/Ile/Val-binding_protein

description:
  Mixed, incl. Branched-chain amino acid ATP-binding cassette transporter, and Leu/Ile/Val-binding protein


id: CL:10387
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10387_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal,_and_Branched-chain_amino_acid_transport

description:
  Branched-chain amino acid ATP-binding cassette transporter, C-terminal, and Branched-chain amino acid transport


id: CL:104
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:104_Mixed,_incl._Valine,_leucine_and_isoleucine_degradation,_and_Acyl-CoA_dehydrogenase/oxidase_C-terminal

description:
  Mixed, incl. Valine, leucine and isoleucine degradation, and Acyl-CoA dehydrogenase/oxidase C-terminal


id: CL:10408
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10408_Mostly_uncharacterized,_incl._Ring_hydroxylating_beta_subunit,_and_Protein_of_unknown_function_(DUF3237)

description:
  Mostly uncharacterized, incl. Ring hydroxylating beta subunit, and Protein of unknown function (DUF3237)


id: CL:10410
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10410_Mixed,_incl._Ring_hydroxylating_beta_subunit,_and_Aromatic-ring-hydroxylating_dioxygenase,_2Fe-2S-binding_site

description:
  Mixed, incl. Ring hydroxylating beta subunit, and Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site


id: CL:10414
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10414_Mixed,_incl._Ring_hydroxylating_beta_subunit,_and_Aromatic-ring-hydroxylating_dioxygenase,_2Fe-2S-binding_site

description:
  Mixed, incl. Ring hydroxylating beta subunit, and Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site


id: CL:10433
description: Mixed, incl. HMG-CoA lyase, and CoA-transferase family III domain 3 superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10433_Mixed,_incl._HMG-CoA_lyase,_and_CoA-transferase_family_III_domain_3_superfamily


id: CL:10446
description: LysR, substrate-binding, and NIPSNAP
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10446_LysR,_substrate-binding,_and_NIPSNAP


id: CL:1046
description: Mixed, incl. Oxidative phosphorylation, and Caprolactam degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1046_Mixed,_incl._Oxidative_phosphorylation,_and_Caprolactam_degradation


id: CL:1048
description: Mixed, incl. Oxidative phosphorylation, and NAD(P)-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1048_Mixed,_incl._Oxidative_phosphorylation,_and_NAD(P)-binding_domain


id: CL:10481
description: Mixed, incl. NIPSNAP , and SnoaL-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10481_Mixed,_incl._NIPSNAP_,_and_SnoaL-like_domain


id: CL:10500
description: Mixed, incl. Beta-lactamase/transpeptidase-like, and Protein of unknown function DUF4870
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10500_Mixed,_incl._Beta-lactamase/transpeptidase-like,_and_Protein_of_unknown_function_DUF4870


id: CL:10501
description: Mixed, incl. Beta-lactamase/transpeptidase-like, and PGBD superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10501_Mixed,_incl._Beta-lactamase/transpeptidase-like,_and_PGBD_superfamily


id: CL:10503
description: Mixed, incl. Beta-lactamase/transpeptidase-like, and PGBD superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10503_Mixed,_incl._Beta-lactamase/transpeptidase-like,_and_PGBD_superfamily


id: CL:10504
description: Beta-lactamase/transpeptidase-like, and PGBD superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10504_Beta-lactamase/transpeptidase-like,_and_PGBD_superfamily


id: CL:10508
description: Serine-type exopeptidase activity, and Beta-lactamase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10508_Serine-type_exopeptidase_activity,_and_Beta-lactamase


id: CL:1051
description: Oxidoreduction-driven active transmembrane transporter activity, and Oxidative phosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1051_Oxidoreduction-driven_active_transmembrane_transporter_activity,_and_Oxidative_phosphorylation


id: CL:1052
description: Quinone binding, and NAD(P)-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1052_Quinone_binding,_and_NAD(P)-binding_domain


id: CL:10527
description: Mixed, incl. Acetate CoA-transferase activity, and Lipid degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10527_Mixed,_incl._Acetate_CoA-transferase_activity,_and_Lipid_degradation


id: CL:1054
description: NADH dehydrogenase (quinone) activity, and NAD(P)-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1054_NADH_dehydrogenase_(quinone)_activity,_and_NAD(P)-binding_domain


id: CL:10549
description: Mixed, incl. D-serine catabolic process, and D-arabinono-1,4-lactone oxidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10549_Mixed,_incl._D-serine_catabolic_process,_and_D-arabinono-1,4-lactone_oxidase_activity


id: CL:1057
description: Quinone, and Respiratory chain complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1057_Quinone,_and_Respiratory_chain_complex


id: CL:10570
description: Latent infection - Other responses of Mtb to phagocytosis, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10570_Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis,_and_Peptide_transport


id: CL:10571
description: Latent infection - Other responses of Mtb to phagocytosis, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10571_Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis,_and_Peptide_transport


id: CL:10572
description: Mixed, incl. Peptide transport, and Solute-binding protein family 5
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10572_Mixed,_incl._Peptide_transport,_and_Solute-binding_protein_family_5


id: CL:10573
description: Mixed, incl. Peptide transport, and Solute-binding protein family 5
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10573_Mixed,_incl._Peptide_transport,_and_Solute-binding_protein_family_5


id: CL:10574
description: Mixed, incl. Peptide transport, and Solute-binding protein family 5
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10574_Mixed,_incl._Peptide_transport,_and_Solute-binding_protein_family_5


id: CL:10575
description: Mixed, incl. Peptide transport, and Solute-binding protein family 5
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10575_Mixed,_incl._Peptide_transport,_and_Solute-binding_protein_family_5


id: CL:10576
description: Mixed, incl. Peptide transport, and Solute-binding protein family 5
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10576_Mixed,_incl._Peptide_transport,_and_Solute-binding_protein_family_5


id: CL:10577
description: Mixed, incl. Solute-binding protein family 5, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10577_Mixed,_incl._Solute-binding_protein_family_5,_and_Peptide_transport


id: CL:10578
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10578_Mixed,_incl._Solute-binding_protein_family_5,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal

description:
  Mixed, incl. Solute-binding protein family 5, and Oligopeptide/dipeptide ABC transporter, C-terminal


id: CL:10579
description: Peptide transport, and Solute-binding protein family 5
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10579_Peptide_transport,_and_Solute-binding_protein_family_5


id: CL:10581
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10581_Mixed,_incl._Solute-binding_protein_family_5,_and_Oligopeptide_transport_permease_C-like,_N-terminal_domain

description:
  Mixed, incl. Solute-binding protein family 5, and Oligopeptide transport permease C-like, N-terminal domain


id: CL:10583
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10583_Oligopeptide_transport_permease_C-like,_N-terminal_domain,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal

description:
  Oligopeptide transport permease C-like, N-terminal domain, and Oligopeptide/dipeptide ABC transporter, C-terminal


id: CL:1059
description: Quinone, and Respiratory chain complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1059_Quinone,_and_Respiratory_chain_complex


id: CL:106
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:106_Mixed,_incl._Valine,_leucine_and_isoleucine_degradation,_and_Acyl-CoA_dehydrogenase/oxidase_C-terminal

description:
  Mixed, incl. Valine, leucine and isoleucine degradation, and Acyl-CoA dehydrogenase/oxidase C-terminal


id: CL:10600
description: Oligopeptide transport permease C-like, N-terminal domain, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10600_Oligopeptide_transport_permease_C-like,_N-terminal_domain,_and_Peptide_transport


id: CL:10619
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10619_Oligopeptide_transport_permease_C-like,_N-terminal_domain,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal

description:
  Oligopeptide transport permease C-like, N-terminal domain, and Oligopeptide/dipeptide ABC transporter, C-terminal


id: CL:10629
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10629_Oligopeptide_transport_permease_C-like,_N-terminal_domain,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal

description:
  Oligopeptide transport permease C-like, N-terminal domain, and Oligopeptide/dipeptide ABC transporter, C-terminal


id: CL:10639
description: Mixed, incl. Solute-binding protein family 5, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10639_Mixed,_incl._Solute-binding_protein_family_5,_and_Peptide_transport


id: CL:10650
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10650_Oligopeptide/dipeptide_transporter,_C-terminal_region,_and_ABC_transporter_type_1,_GsiC-like,_N-terminal_domain

description:
  Oligopeptide/dipeptide transporter, C-terminal region, and ABC transporter type 1, GsiC-like, N-terminal domain


id: CL:10662
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10662_Mixed,_incl._Solute-binding_protein_family_5,_conserved_site,_and_Acyl-CoA_dehydrogenase,_C-terminal_domain

description:
  Mixed, incl. Solute-binding protein family 5, conserved site, and Acyl-CoA dehydrogenase, C-terminal domain


id: CL:10675
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10675_Mostly_uncharacterized,_incl._Cytidine_deamination,_and_Solute-binding_protein_family_5,_conserved_site

description:
  Mostly uncharacterized, incl. Cytidine deamination, and Solute-binding protein family 5, conserved site


id: CL:10677
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10677_Mixed,_incl._Solute-binding_protein_family_5,_conserved_site,_and_N-terminal_TM_domain_of_oligopeptide_transport_permease_C

description:
  Mixed, incl. Solute-binding protein family 5, conserved site, and N-terminal TM domain of oligopeptide transport permease C


id: CL:10703
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10703_Mixed,_incl._Protein_of_unknown_function_DUF1684,_and_Nitrilotriacetate_monooxygenase_component_A/pristinamycin_IIA_synthase_subunit_A

description:
  Mixed, incl. Protein of unknown function DUF1684, and Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A


id: CL:10721
description: Mostly uncharacterized, incl. Asp/Glu/Hydantoin racemase, and MmgE/PrpD
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10721_Mostly_uncharacterized,_incl._Asp/Glu/Hydantoin_racemase,_and_MmgE/PrpD


id: CL:10724
description: Mixed, incl. Asp/Glu/Hydantoin racemase, and MmgE/PrpD
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10724_Mixed,_incl._Asp/Glu/Hydantoin_racemase,_and_MmgE/PrpD


id: CL:10737
description: Peptide transport, and ABC transporter type 1, GsiC-like, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10737_Peptide_transport,_and_ABC_transporter_type_1,_GsiC-like,_N-terminal_domain


id: CL:10747
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10747_Mixed,_incl._Nitrilotriacetate_monooxygenase_component_A/pristinamycin_IIA_synthase_subunit_A,_and_Acetyltransferase_(GNAT)_domain

description:
  Mixed, incl. Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A, and Acetyltransferase (GNAT) domain


id: CL:10750
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10750_Mixed,_incl._Acetyltransferase_(GNAT)_domain,_and_Nitrilotriacetate_monooxygenase_component_A/pristinamycin_IIA_synthase_subunit_A

description:
  Mixed, incl. Acetyltransferase (GNAT) domain, and Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A


id: CL:10766
description: Mixed, incl. DoxX-like family, and Oligopeptide/dipeptide ABC transporter, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10766_Mixed,_incl._DoxX-like_family,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal


id: CL:10768
description: Mixed, incl. L-aspartate oxidase, and Oligopeptide/dipeptide ABC transporter, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10768_Mixed,_incl._L-aspartate_oxidase,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal


id: CL:10770
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10770_Oligopeptide/dipeptide_ABC_transporter,_C-terminal,_and_ABC_transporter_type_1,_GsiC-like,_N-terminal_domain

description:
  Oligopeptide/dipeptide ABC transporter, C-terminal, and ABC transporter type 1, GsiC-like, N-terminal domain


id: CL:10790
description: Mixed, incl. DoxX-like family, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10790_Mixed,_incl._DoxX-like_family,_and_Sigma-70,_region_4


id: CL:108
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:108_Mixed,_incl._Valine,_leucine_and_isoleucine_degradation,_and_Acyl-CoA_dehydrogenase/oxidase_C-terminal

description:
  Mixed, incl. Valine, leucine and isoleucine degradation, and Acyl-CoA dehydrogenase/oxidase C-terminal


id: CL:10800
description: Mixed, incl. MetI-like superfamily, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10800_Mixed,_incl._MetI-like_superfamily,_and_Bacterial_extracellular_solute-binding_protein


id: CL:10801
description: Mixed, incl. ABC-type transporter activity, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10801_Mixed,_incl._ABC-type_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein


id: CL:10802
description: ABC-type transporter activity, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10802_ABC-type_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein


id: CL:10803
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10803_Mixed,_incl._ABC-type_maltose_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein

description:
  Mixed, incl. ABC-type maltose transporter activity, and Bacterial extracellular solute-binding protein


id: CL:10804
description: ABC-type maltose transporter activity, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10804_ABC-type_maltose_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein


id: CL:10806
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10806_Mixed,_incl._ABC-type_maltose_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein

description:
  Mixed, incl. ABC-type maltose transporter activity, and Bacterial extracellular solute-binding protein


id: CL:10807
description: Mixed, incl. MalK, OB fold domain, and ABC-type maltose transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10807_Mixed,_incl._MalK,_OB_fold_domain,_and_ABC-type_maltose_transporter_activity


id: CL:10822
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10822_Twin-arginine_translocation_pathway,_signal_sequence,_bacterial/archaeal,_and_ABC-type_maltose_transporter_activity

description:
  Twin-arginine translocation pathway, signal sequence, bacterial/archaeal, and ABC-type maltose transporter activity


id: CL:10843
description: Mixed, incl. TOBE domain, and Six-hairpin glycosidase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10843_Mixed,_incl._TOBE_domain,_and_Six-hairpin_glycosidase-like_superfamily


id: CL:10852
description: Mixed, incl. Polyamine transport, and Ferric binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10852_Mixed,_incl._Polyamine_transport,_and_Ferric_binding_protein


id: CL:10854
description: Polyamine transport, and ABC-type polyamine transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10854_Polyamine_transport,_and_ABC-type_polyamine_transporter_activity


id: CL:10873
description: Mixed, incl. TOBE domain, and Ferric binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10873_Mixed,_incl._TOBE_domain,_and_Ferric_binding_protein


id: CL:10890
description: Mixed, incl. Sugar transport, and Ectoine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10890_Mixed,_incl._Sugar_transport,_and_Ectoine_catabolic_process


id: CL:10891
description: Mixed, incl. Sugar transport, and Amidohydrolase 3
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10891_Mixed,_incl._Sugar_transport,_and_Amidohydrolase_3


id: CL:109
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:109_Mixed,_incl._Valine,_leucine_and_isoleucine_degradation,_and_Acyl-CoA_dehydrogenase/oxidase_C-terminal

description:
[cell repeats an earlier one in this file: 102 characters]


id: CL:10904
description: Mixed, incl. Ectoine catabolic process, and YjgF/YER057c/UK114 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10904_Mixed,_incl._Ectoine_catabolic_process,_and_YjgF/YER057c/UK114_family


id: CL:10916
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10916_Mixed,_incl._Bacterial_periplasmic_substrate-binding_proteins,_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain

description:
  Mixed, incl. Bacterial periplasmic substrate-binding proteins, and Amino acid ABC transporter, permease protein, 3-TM domain


id: CL:10917
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10917_Mixed,_incl._Bacterial_periplasmic_substrate-binding_proteins,_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain

description:
  Mixed, incl. Bacterial periplasmic substrate-binding proteins, and Amino acid ABC transporter, permease protein, 3-TM domain


id: CL:10918
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10918_Bacterial_periplasmic_substrate-binding_proteins,_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain

description:
  Bacterial periplasmic substrate-binding proteins, and Amino acid ABC transporter, permease protein, 3-TM domain


id: CL:10920
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10920_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_Bacterial_periplasmic_substrate-binding_proteins

description:
  Amino acid ABC transporter, permease protein, 3-TM domain, and Bacterial periplasmic substrate-binding proteins


id: CL:10922
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10922_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_ABC-type_amino_acid_transporter_activity

description:
  Amino acid ABC transporter, permease protein, 3-TM domain, and ABC-type amino acid transporter activity


id: CL:10940
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10940_Ectoine/Hydroxyectoine_ABC_transporter,_substrate-binding_protein_EhuB,_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain

description:
  Ectoine/Hydroxyectoine ABC transporter, substrate-binding protein EhuB, and Amino acid ABC transporter, permease protein, 3-TM domain


id: CL:10961
description: Mixed, incl. YjgF/YER057c/UK114 family, and Periplasmic binding protein-like I
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10961_Mixed,_incl._YjgF/YER057c/UK114_family,_and_Periplasmic_binding_protein-like_I


id: CL:10971
description: Mixed, incl. MacB, ATP-binding domain, and HlyD family secretion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10971_Mixed,_incl._MacB,_ATP-binding_domain,_and_HlyD_family_secretion_protein


id: CL:10973
description: HlyD family secretion protein, and FtsX-like permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10973_HlyD_family_secretion_protein,_and_FtsX-like_permease_family


id: CL:10996
description: Mixed, incl. De novo IMP biosynthetic process, and Pyridoxamine 5-phosphate oxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10996_Mixed,_incl._De_novo_IMP_biosynthetic_process,_and_Pyridoxamine_5-phosphate_oxidase


id: CL:10997
description: Mixed, incl. De novo IMP biosynthetic process, and F420, menaquinone cofactor biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10997_Mixed,_incl._De_novo_IMP_biosynthetic_process,_and_F420,_menaquinone_cofactor_biosynthesis


id: CL:10999
description: Mixed, incl. Thiamine-monophosphate kinase-like, and F420, menaquinone cofactor biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:10999_Mixed,_incl._Thiamine-monophosphate_kinase-like,_and_F420,_menaquinone_cofactor_biosynthesis


id: CL:110
description: Valine, leucine and isoleucine degradation, and Acyl-CoA dehydrogenase/oxidase C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:110_Valine,_leucine_and_isoleucine_degradation,_and_Acyl-CoA_dehydrogenase/oxidase_C-terminal


id: CL:11020
description: Pyridoxamine 5-phosphate oxidase, and SnoaL-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11020_Pyridoxamine_5-phosphate_oxidase,_and_SnoaL-like_domain


id: CL:11029
description: Mostly uncharacterized, incl. Sodium, and Sporadically distributed protein CHP04141
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11029_Mostly_uncharacterized,_incl._Sodium,_and_Sporadically_distributed_protein_CHP04141


id: CL:11031
description: Mixed, incl. Sodium, and Thioredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11031_Mixed,_incl._Sodium,_and_Thioredoxin


id: CL:11059
description: Mixed, incl. Metalloprotease, and Papain-like cysteine peptidase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11059_Mixed,_incl._Metalloprotease,_and_Papain-like_cysteine_peptidase_superfamily


id: CL:11060
description: ATP-grasp fold, and Endopeptidase, NLPC/P60 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11060_ATP-grasp_fold,_and_Endopeptidase,_NLPC/P60_domain


id: CL:11071
description: Metalloprotease, and ER-bound oxygenase mpaB/mpaB/Rubber oxygenase, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11071_Metalloprotease,_and_ER-bound_oxygenase_mpaB/mpaB/Rubber_oxygenase,_catalytic_domain


id: CL:11080
description: Mixed, incl. GntR, C-terminal, and Transcription regulator IclR, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11080_Mixed,_incl._GntR,_C-terminal,_and_Transcription_regulator_IclR,_C-terminal


id: CL:11081
description: Mixed, incl. Transcription regulator IclR, C-terminal, and Helix-turn-helix, HxlR type
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11081_Mixed,_incl._Transcription_regulator_IclR,_C-terminal,_and_Helix-turn-helix,_HxlR_type


id: CL:11082
description: Transcription regulator IclR, C-terminal, and LigXa-like, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11082_Transcription_regulator_IclR,_C-terminal,_and_LigXa-like,_C-terminal_domain


id: CL:11083
description: Transcription regulator IclR, C-terminal, and LigXa-like, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11083_Transcription_regulator_IclR,_C-terminal,_and_LigXa-like,_C-terminal_domain


id: CL:11085
description: Transcription regulator IclR, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11085_Transcription_regulator_IclR,_C-terminal


id: CL:11087
description: Helix_turn_helix isocitrate lyase regulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11087_Helix_turn_helix_isocitrate_lyase_regulation


id: CL:11089
description: Helix_turn_helix isocitrate lyase regulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11089_Helix_turn_helix_isocitrate_lyase_regulation


id: CL:111
description: Valine, leucine and isoleucine degradation, and Acyl-CoA dehydrogenase/oxidase C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:111_Valine,_leucine_and_isoleucine_degradation,_and_Acyl-CoA_dehydrogenase/oxidase_C-terminal


id: CL:1111
description: Respiratory chain complex, and NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1111_Respiratory_chain_complex,_and_NADH-ubiquinone_oxidoreductase-G_iron-sulfur_binding_region


id: CL:11127
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11127_Mixed,_incl._Cellular_alkane_metabolic_process,_and_Methylenetetrahydrofolate_reductase_NADH_activity

description:
  Mixed, incl. Cellular alkane metabolic process, and Methylenetetrahydrofolate reductase NADH activity


id: CL:11136
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11136_Mixed,_incl._Polyketide_cyclase_/_dehydrase_and_lipid_transport,_and_Bacterial_transcriptional_regulator

description:
  Mixed, incl. Polyketide cyclase / dehydrase and lipid transport, and Bacterial transcriptional regulator


id: CL:11145
description: Mixed, incl. Helix-turn-helix, HxlR type, and PaaX-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11145_Mixed,_incl._Helix-turn-helix,_HxlR_type,_and_PaaX-like_protein


id: CL:11146
description: Mixed, incl. Helix-turn-helix, HxlR type, and PaaX-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11146_Mixed,_incl._Helix-turn-helix,_HxlR_type,_and_PaaX-like_protein


id: CL:11148
description: Mixed, incl. Helix-turn-helix, HxlR type, and PaaX-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11148_Mixed,_incl._Helix-turn-helix,_HxlR_type,_and_PaaX-like_protein


id: CL:11149
description: Mixed, incl. Sir2 family, and PaaX-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11149_Mixed,_incl._Sir2_family,_and_PaaX-like_protein


id: CL:11151
description: Mixed, incl. PaaX-like protein, and LytR_cpsA_psr family
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11151_Mixed,_incl._PaaX-like_protein,_and_LytR_cpsA_psr_family


id: CL:11188
description: HxlR-like helix-turn-helix, and YjgF/YER057c/UK114 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11188_HxlR-like_helix-turn-helix,_and_YjgF/YER057c/UK114_family


id: CL:11197
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11197_Mixed,_incl._Protein_of_unknown_function_(DUF3237),_and_Mycothiol_maleylpyruvate_isomerase_N-terminal_domain

description:
  Mixed, incl. Protein of unknown function (DUF3237), and Mycothiol maleylpyruvate isomerase N-terminal domain


id: CL:112
description: Valine, leucine and isoleucine degradation, and Acyl-CoA dehydrogenase/oxidase C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:112_Valine,_leucine_and_isoleucine_degradation,_and_Acyl-CoA_dehydrogenase/oxidase_C-terminal


id: CL:11206
description: GntR, C-terminal, and TRAP C4-dicarboxylate transport system permease DctM subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11206_GntR,_C-terminal,_and_TRAP_C4-dicarboxylate_transport_system_permease_DctM_subunit


id: CL:1123
description: Mixed, incl. Cytochrome-c oxidase activity, and TPM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1123_Mixed,_incl._Cytochrome-c_oxidase_activity,_and_TPM_domain


id: CL:11263
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11263_TRAP_C4-dicarboxylate_transport_system_permease_DctM_subunit,_and_TRAP_transporter_solute_receptor_DctP

description:
  TRAP C4-dicarboxylate transport system permease DctM subunit, and TRAP transporter solute receptor DctP


id: CL:11264
description: C4-dicarboxylate transport, and TRAP transporter solute receptor DctP
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11264_C4-dicarboxylate_transport,_and_TRAP_transporter_solute_receptor_DctP


id: CL:1127
description: Cytochrome-c oxidase activity, and Rieske iron-sulphur protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1127_Cytochrome-c_oxidase_activity,_and_Rieske_iron-sulphur_protein


id: CL:11275
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11275_TRAP_transporter_solute_receptor,_TAXI_family,_and_TRAP_C4-dicarboxylate_transport_system_permease_DctM_subunit

description:
  TRAP transporter solute receptor, TAXI family, and TRAP C4-dicarboxylate transport system permease DctM subunit


id: CL:11288
description: Mixed, incl. Transposase activity, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11288_Mixed,_incl._Transposase_activity,_and_AAA_domain


id: CL:11290
description: Mixed, incl. AAA domain, and DDE transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11290_Mixed,_incl._AAA_domain,_and_DDE_transposase_sub-family


id: CL:11319
description: Mostly uncharacterized, incl. Cro/C1-type helix-turn-helix domain, and MDMPI C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11319_Mostly_uncharacterized,_incl._Cro/C1-type_helix-turn-helix_domain,_and_MDMPI_C-terminal


id: CL:11320
description: Mostly uncharacterized, incl. ParB/Sulfiredoxin, and Endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11320_Mostly_uncharacterized,_incl._ParB/Sulfiredoxin,_and_Endonuclease


id: CL:11321
description: Mostly uncharacterized, incl. Endonuclease, and dUTPase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11321_Mostly_uncharacterized,_incl._Endonuclease,_and_dUTPase


id: CL:11323
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11323_Mostly_uncharacterized,_incl._Single-stranded_DNA-binding_protein,_and_PD-(D/E)XK_endonuclease-like_domain_superfamily

description:
  Mostly uncharacterized, incl. Single-stranded DNA-binding protein, and PD-(D/E)XK endonuclease-like domain superfamily


id: CL:11324
description: Mixed, incl. PD-(D/E)XK endonuclease-like domain superfamily, and protein-DNA complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11324_Mixed,_incl._PD-(D/E)XK_endonuclease-like_domain_superfamily,_and_protein-DNA_complex


id: CL:11341
description: Mixed, incl. Single-stranded DNA-binding protein, and Dinitrosyl-iron complex binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11341_Mixed,_incl._Single-stranded_DNA-binding_protein,_and_Dinitrosyl-iron_complex_binding


id: CL:11351
description: Mostly uncharacterized, incl. dUTPase, and CRISPR-associated protein Cse3
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11351_Mostly_uncharacterized,_incl._dUTPase,_and_CRISPR-associated_protein_Cse3


id: CL:11354
description: Mixed, incl. dUTPase, and CRISPR-associated protein Cse3
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11354_Mixed,_incl._dUTPase,_and_CRISPR-associated_protein_Cse3


id: CL:11396
description: Mixed, incl. MDMPI C-terminal, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11396_Mixed,_incl._MDMPI_C-terminal,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:11397
description: MDMPI C-terminal, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11397_MDMPI_C-terminal,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:114
description: Valine, leucine and isoleucine degradation, and Acyl-CoA dehydrogenase/oxidase C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:114_Valine,_leucine_and_isoleucine_degradation,_and_Acyl-CoA_dehydrogenase/oxidase_C-terminal


id: CL:11423
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11423_Mixed,_incl._Cyclic_phosphodiesterase,_and_Heat_shock_protein_DnaJ,_cysteine-rich_domain_superfamily

description:
  Mixed, incl. Cyclic phosphodiesterase, and Heat shock protein DnaJ, cysteine-rich domain superfamily


id: CL:11432
description: Mostly uncharacterized, incl. Cell adhesion, and Ami_2
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11432_Mostly_uncharacterized,_incl._Cell_adhesion,_and_Ami_2


id: CL:11434
description: Mostly uncharacterized, incl. Cell adhesion, and Ami_2
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11434_Mostly_uncharacterized,_incl._Cell_adhesion,_and_Ami_2


id: CL:11435
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11435_Mostly_uncharacterized,_incl._Fibronectin_type_III,_and_Glycosyl_hydrolase,_five-bladed_beta-propellor_domain_superfamily

description:
  Mostly uncharacterized, incl. Fibronectin type III, and Glycosyl hydrolase, five-bladed beta-propellor domain superfamily


id: CL:11436
description: Mostly uncharacterized, incl. Xylene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11436_Mostly_uncharacterized,_incl._Xylene_degradation


id: CL:11459
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11459_Mixed,_incl._Fibronectin_type_III,_and_Glycosyl_hydrolase,_five-bladed_beta-propellor_domain_superfamily

description:
  Mixed, incl. Fibronectin type III, and Glycosyl hydrolase, five-bladed beta-propellor domain superfamily


id: CL:11473
description: Mostly uncharacterized, incl. Ami_2, and Sortase F
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11473_Mostly_uncharacterized,_incl._Ami_2,_and_Sortase_F


id: CL:11476
description: Mixed, incl. Ami_2, and Sortase F
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11476_Mixed,_incl._Ami_2,_and_Sortase_F


id: CL:115
description: Valine, leucine and isoleucine degradation, and Acyl-CoA dehydrogenase/oxidase C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:115_Valine,_leucine_and_isoleucine_degradation,_and_Acyl-CoA_dehydrogenase/oxidase_C-terminal


id: CL:11509
description: Mixed, incl. Antioxidant, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11509_Mixed,_incl._Antioxidant,_and_Coiled_coil


id: CL:11542
description: Mostly uncharacterized, incl. Modulation of process of another organism
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11542_Mostly_uncharacterized,_incl._Modulation_of_process_of_another_organism


id: CL:11544
description: Mixed, incl. Modulation of process of another organism
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:11544_Mixed,_incl._Modulation_of_process_of_another_organism


id: CL:1158
description: Mixed, incl. Glucose catabolic process, and NADH:ubiquinone oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1158_Mixed,_incl._Glucose_catabolic_process,_and_NADH:ubiquinone_oxidoreductase


id: CL:116
description: Valine, leucine and isoleucine degradation, and Acyl-CoA dehydrogenase/oxidase C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:116_Valine,_leucine_and_isoleucine_degradation,_and_Acyl-CoA_dehydrogenase/oxidase_C-terminal


id: CL:1162
description: Glucose catabolic process, and NADH-quinone oxidoreductase, subunit D
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1162_Glucose_catabolic_process,_and_NADH-quinone_oxidoreductase,_subunit_D


id: CL:117
description: Valine, leucine and isoleucine degradation, and enoyl-CoA hydratase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:117_Valine,_leucine_and_isoleucine_degradation,_and_enoyl-CoA_hydratase_activity


id: CL:118
description: Geraniol degradation, and Synthesis and degradation of ketone bodies
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:118_Geraniol_degradation,_and_Synthesis_and_degradation_of_ketone_bodies


id: CL:1184
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1184_Mixed,_incl._Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_one_atom_of_oxygen,_and_Alpha/beta_hydrolase_fold

description:
  Mixed, incl. Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen, and Alpha/beta hydrolase fold


id: CL:1185
description: Pyridine nucleotide-disulphide oxidoreductase, and Alpha/beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1185_Pyridine_nucleotide-disulphide_oxidoreductase,_and_Alpha/beta_hydrolase_fold


id: CL:1187
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1187_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_one_atom_of_oxygen,_and_Alpha/beta_hydrolase_fold

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen, and Alpha/beta hydrolase fold


id: CL:1189
description: N,N-dimethylaniline monooxygenase activity, and Response to pH
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1189_N,N-dimethylaniline_monooxygenase_activity,_and_Response_to_pH


id: CL:1199
description: Alpha/beta hydrolase fold, and Pyridine nucleotide-disulphide oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1199_Alpha/beta_hydrolase_fold,_and_Pyridine_nucleotide-disulphide_oxidoreductase


id: CL:120
description: Geraniol degradation, and Acyl-CoA dehydrogenase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:120_Geraniol_degradation,_and_Acyl-CoA_dehydrogenase,_conserved_site


id: CL:122
description: Geraniol degradation, and Thiolase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:122_Geraniol_degradation,_and_Thiolase,_N-terminal


id: CL:1224
description: Mixed, incl. Copper amine oxidase, and Pyridoxal phosphate-dependent decarboxylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1224_Mixed,_incl._Copper_amine_oxidase,_and_Pyridoxal_phosphate-dependent_decarboxylase


id: CL:1237
description: Mixed, incl. Sulfur relay system, and Selenocompound metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1237_Mixed,_incl._Sulfur_relay_system,_and_Selenocompound_metabolism


id: CL:1238
description: Mixed, incl. Sulfur relay system, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1238_Mixed,_incl._Sulfur_relay_system,_and_Nitrogen_metabolism


id: CL:1239
description: Mixed, incl. Prosthetic group metabolic process, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1239_Mixed,_incl._Prosthetic_group_metabolic_process,_and_Nitrogen_metabolism


id: CL:124
description: Geraniol degradation, and Thiolase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:124_Geraniol_degradation,_and_Thiolase,_N-terminal


id: CL:1240
description: Mixed, incl. Prosthetic group metabolic process, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1240_Mixed,_incl._Prosthetic_group_metabolic_process,_and_Nitrogen_metabolism


id: CL:1241
description: Mixed, incl. Nitrogen metabolism, and NADH:flavin oxidoreductase / NADH oxidase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1241_Mixed,_incl._Nitrogen_metabolism,_and_NADH:flavin_oxidoreductase_/_NADH_oxidase_family


id: CL:1242
description: Mixed, incl. Nitrogen metabolism, and NADH:flavin oxidoreductase / NADH oxidase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1242_Mixed,_incl._Nitrogen_metabolism,_and_NADH:flavin_oxidoreductase_/_NADH_oxidase_family


id: CL:1244
description: Mixed, incl. Nitrate metabolic process, and NADH:flavin oxidoreductase / NADH oxidase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1244_Mixed,_incl._Nitrate_metabolic_process,_and_NADH:flavin_oxidoreductase_/_NADH_oxidase_family


id: CL:1246
description: Mixed, incl. Nitrate metabolic process, and NADH:flavin oxidoreductase / NADH oxidase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1246_Mixed,_incl._Nitrate_metabolic_process,_and_NADH:flavin_oxidoreductase_/_NADH_oxidase_family


id: CL:1247
description: NADH:flavin oxidoreductase / NADH oxidase family, and Oxidoreductase FAD/NAD(P)-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1247_NADH:flavin_oxidoreductase_/_NADH_oxidase_family,_and_Oxidoreductase_FAD/NAD(P)-binding


id: CL:1249
description: NADH:flavin oxidoreductase / NADH oxidase family, and Oxidoreductase FAD/NAD(P)-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1249_NADH:flavin_oxidoreductase_/_NADH_oxidase_family,_and_Oxidoreductase_FAD/NAD(P)-binding


id: CL:1251
description: NADH:flavin oxidoreductase / NADH oxidase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1251_NADH:flavin_oxidoreductase_/_NADH_oxidase_family


id: CL:126
description: Lipid oxidation, and Enoyl-CoA hydratase/isomerase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:126_Lipid_oxidation,_and_Enoyl-CoA_hydratase/isomerase,_conserved_site


id: CL:127
description: Thiolase, N-terminal, and NAD+ binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:127_Thiolase,_N-terminal,_and_NAD+_binding


id: CL:1278
description: Nitrate metabolic process, and Nitrate import
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1278_Nitrate_metabolic_process,_and_Nitrate_import


id: CL:131
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:131_Mixed,_incl._Thiolase,_acyl-enzyme_intermediate_active_site,_and_3-hydroxyacyl-CoA_dehydrogenase_activity

description:
  Mixed, incl. Thiolase, acyl-enzyme intermediate active site, and 3-hydroxyacyl-CoA dehydrogenase activity


id: CL:1326
description: Glutamate synthase activity, and L-glutamine aminotransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1326_Glutamate_synthase_activity,_and_L-glutamine_aminotransferase_activity


id: CL:1337
description: Mixed, incl. 3Fe-4S ferredoxin, and Ferredoxin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1337_Mixed,_incl._3Fe-4S_ferredoxin,_and_Ferredoxin_metabolic_process


id: CL:1347
description: Prosthetic group metabolic process, and Molybdate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1347_Prosthetic_group_metabolic_process,_and_Molybdate_ion_transport


id: CL:1349
description: Prosthetic group metabolic process, and Molybdate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1349_Prosthetic_group_metabolic_process,_and_Molybdate_ion_transport


id: CL:1351
description: Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1351_Prosthetic_group_metabolic_process


id: CL:1361
description: ThiS family, and Ubiquitin-activating enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1361_ThiS_family,_and_Ubiquitin-activating_enzyme


id: CL:1391
description: Mixed, incl. Ammonia transport, and Nitrogen regulatory protein PII
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1391_Mixed,_incl._Ammonia_transport,_and_Nitrogen_regulatory_protein_PII


id: CL:1393
description: Ammonia transport, and Nitrogen regulatory protein PII
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1393_Ammonia_transport,_and_Nitrogen_regulatory_protein_PII


id: CL:1413
description: Mixed, incl. Thiosulfate sulfurtransferase activity, and Cysteine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1413_Mixed,_incl._Thiosulfate_sulfurtransferase_activity,_and_Cysteine_biosynthetic_process


id: CL:1414
description: Mixed, incl. Cysteine biosynthetic process, and ACT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1414_Mixed,_incl._Cysteine_biosynthetic_process,_and_ACT_domain


id: CL:1427
description: Mixed, incl. Sulfur carrier activity, and Thiosulfate sulfurtransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1427_Mixed,_incl._Sulfur_carrier_activity,_and_Thiosulfate_sulfurtransferase_activity


id: CL:1443
description: Mixed, incl. Selenocompound metabolism, and Iron-sulfur cluster assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1443_Mixed,_incl._Selenocompound_metabolism,_and_Iron-sulfur_cluster_assembly


id: CL:1445
description: Mixed, incl. Iron-sulfur cluster assembly, and Aminotransferase class V domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1445_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Aminotransferase_class_V_domain


id: CL:1447
description: Iron-sulfur cluster assembly, and Aminotransferase class-V, pyridoxal-phosphate binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1447_Iron-sulfur_cluster_assembly,_and_Aminotransferase_class-V,_pyridoxal-phosphate_binding_site


id: CL:1449
description: Mixed, incl. SUF system FeS cluster assembly, SufBD, and Cysteine desulfurase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1449_Mixed,_incl._SUF_system_FeS_cluster_assembly,_SufBD,_and_Cysteine_desulfurase


id: CL:1469
description: Mixed, incl. Glycoside transport, and Prolyl oligopeptidase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1469_Mixed,_incl._Glycoside_transport,_and_Prolyl_oligopeptidase_family


id: CL:1483
description: Response to oxidative stress, and Thioredoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1483_Response_to_oxidative_stress,_and_Thioredoxin_domain


id: CL:1485
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1485_Mixed,_incl._Thioredoxin_domain,_and_Pyridine_nucleotide-disulphide_oxidoreductase,_class-II,_active_site

description:
  Mixed, incl. Thioredoxin domain, and Pyridine nucleotide-disulphide oxidoreductase, class-II, active site


id: CL:1487
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1487_Pyridine_nucleotide-disulphide_oxidoreductase,_class-II,_active_site,_and_Thioredoxin,_conserved_site

description:
  Pyridine nucleotide-disulphide oxidoreductase, class-II, active site, and Thioredoxin, conserved site


id: CL:1499
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor, and NHL repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1499_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor,_and_NHL_repeat


id: CL:1509
description: Hydrogen peroxide, and Ferric-uptake regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1509_Hydrogen_peroxide,_and_Ferric-uptake_regulator


id: CL:1518
description: Mixed, incl. Short-chain dehydrogenase/reductase SDR, and Protein tyrosine phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1518_Mixed,_incl._Short-chain_dehydrogenase/reductase_SDR,_and_Protein_tyrosine_phosphatase_activity


id: CL:1519
description: Mixed, incl. Short-chain dehydrogenase/reductase SDR, and Protein tyrosine phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1519_Mixed,_incl._Short-chain_dehydrogenase/reductase_SDR,_and_Protein_tyrosine_phosphatase_activity


id: CL:1520
description: Mixed, incl. Short-chain dehydrogenase/reductase SDR, and Protein tyrosine phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1520_Mixed,_incl._Short-chain_dehydrogenase/reductase_SDR,_and_Protein_tyrosine_phosphatase_activity


id: CL:1521
description: Mixed, incl. Short-chain dehydrogenase/reductase SDR, and Protein tyrosine phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1521_Mixed,_incl._Short-chain_dehydrogenase/reductase_SDR,_and_Protein_tyrosine_phosphatase_activity


id: CL:1522
description: Mixed, incl. Short-chain dehydrogenase/reductase SDR, and Protein tyrosine phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1522_Mixed,_incl._Short-chain_dehydrogenase/reductase_SDR,_and_Protein_tyrosine_phosphatase_activity


id: CL:1523
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1523_Mixed,_incl._Short-chain_dehydrogenase/reductase,_conserved_site,_and_Biosynthesis_of_unsaturated_fatty_acids

description:
  Mixed, incl. Short-chain dehydrogenase/reductase, conserved site, and Biosynthesis of unsaturated fatty acids


id: CL:1525
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1525_Mixed,_incl._Short-chain_dehydrogenase/reductase,_conserved_site,_and_Biosynthesis_of_unsaturated_fatty_acids

description:
  Mixed, incl. Short-chain dehydrogenase/reductase, conserved site, and Biosynthesis of unsaturated fatty acids


id: CL:1527
description: Short-chain dehydrogenase/reductase, conserved site, and N,N-dimethylaniline monooxygenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1527_Short-chain_dehydrogenase/reductase,_conserved_site,_and_N,N-dimethylaniline_monooxygenase_activity


id: CL:1529
description: Short-chain dehydrogenase/reductase SDR
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1529_Short-chain_dehydrogenase/reductase_SDR


id: CL:1531
description: Mycofactocin-dependent oxidoreductase, and KR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1531_Mycofactocin-dependent_oxidoreductase,_and_KR_domain


id: CL:154
description: Enoyl-CoA hydratase/isomerase, conserved site, and Acyl-CoA dehydrogenase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:154_Enoyl-CoA_hydratase/isomerase,_conserved_site,_and_Acyl-CoA_dehydrogenase,_conserved_site


id: CL:1559
description: Mixed, incl. N,N-dimethylaniline monooxygenase activity, and SnoaL-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1559_Mixed,_incl._N,N-dimethylaniline_monooxygenase_activity,_and_SnoaL-like_domain


id: CL:1571
description: Mixed, incl. Acyl-CoA desaturase, and Crp-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1571_Mixed,_incl._Acyl-CoA_desaturase,_and_Crp-type_HTH_domain


id: CL:1572
description: Mixed, incl. Crp-type HTH domain, and Fatty acid synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1572_Mixed,_incl._Crp-type_HTH_domain,_and_Fatty_acid_synthase


id: CL:1583
description: Mixed, incl. Acyl-CoA desaturase, and Fatty acid desaturase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1583_Mixed,_incl._Acyl-CoA_desaturase,_and_Fatty_acid_desaturase


id: CL:1602
description: Mixed, incl. Protein tyrosine phosphatase activity, and Subtilase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1602_Mixed,_incl._Protein_tyrosine_phosphatase_activity,_and_Subtilase_family


id: CL:1605
description: Toll Like Receptor 5 (TLR5) Cascade, and Subtilase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1605_Toll_Like_Receptor_5_(TLR5)_Cascade,_and_Subtilase_family


id: CL:1630
description: Mixed, incl. Methylglyoxal metabolic process, and Geraniol degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1630_Mixed,_incl._Methylglyoxal_metabolic_process,_and_Geraniol_degradation


id: CL:1646
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1646_Mixed,_incl._4Fe-4S_single_cluster_domain,_and_Glyoxalase/Bleomycin_resistance_protein/Dioxygenase_superfamily

description:
  Mixed, incl. 4Fe-4S single cluster domain, and Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily


id: CL:1659
description: Mixed, incl. Mycofactocin-dependent oxidoreductase, and Phosphotransferase system (PTS)
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1659_Mixed,_incl._Mycofactocin-dependent_oxidoreductase,_and_Phosphotransferase_system_(PTS)


id: CL:1661
description: Mixed, incl. Mycofactocin-dependent oxidoreductase, and Creatinine amidohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1661_Mixed,_incl._Mycofactocin-dependent_oxidoreductase,_and_Creatinine_amidohydrolase


id: CL:1663
description: Mycofactocin-dependent oxidoreductase, and Magnesium chelatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1663_Mycofactocin-dependent_oxidoreductase,_and_Magnesium_chelatase_activity


id: CL:1676
description: Mixed, incl. Creatinine amidohydrolase, and MftR, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1676_Mixed,_incl._Creatinine_amidohydrolase,_and_MftR,_C-terminal


id: CL:1689
description: Mixed, incl. Phosphotransferase system (PTS), and TrkA-C domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1689_Mixed,_incl._Phosphotransferase_system_(PTS),_and_TrkA-C_domain


id: CL:1698
description: Mostly uncharacterized, incl. Cell killing, and Stress responsive alpha-beta barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1698_Mostly_uncharacterized,_incl._Cell_killing,_and_Stress_responsive_alpha-beta_barrel


id: CL:1699
description: Mostly uncharacterized, incl. Cell killing, and Stress responsive alpha-beta barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1699_Mostly_uncharacterized,_incl._Cell_killing,_and_Stress_responsive_alpha-beta_barrel


id: CL:1700
description: Mixed, incl. Stress responsive alpha-beta barrel, and Sugar-specific transcriptional regulator TrmB
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1700_Mixed,_incl._Stress_responsive_alpha-beta_barrel,_and_Sugar-specific_transcriptional_regulator_TrmB


id: CL:1713
description: Mixed, incl. Cell killing, and Xylose isomerase-like TIM barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1713_Mixed,_incl._Cell_killing,_and_Xylose_isomerase-like_TIM_barrel


id: CL:1722
description: Mixed, incl. SnoaL-like domain, and Imidazolonepropionase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1722_Mixed,_incl._SnoaL-like_domain,_and_Imidazolonepropionase_activity


id: CL:1731
description: Mixed, incl. Degradation of aromatic compounds, and Alpha/Beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1731_Mixed,_incl._Degradation_of_aromatic_compounds,_and_Alpha/Beta_hydrolase_fold


id: CL:1732
description: Mixed, incl. Alpha/beta hydrolase fold-1, and GroES-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1732_Mixed,_incl._Alpha/beta_hydrolase_fold-1,_and_GroES-like_superfamily


id: CL:1734
description: Mixed, incl. Alpha/beta hydrolase fold-1, and Alcohol dehydrogenase-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1734_Mixed,_incl._Alpha/beta_hydrolase_fold-1,_and_Alcohol_dehydrogenase-like,_C-terminal


id: CL:1735
description: Mixed, incl. Alpha/beta hydrolase fold-1, and L-2-Haloacid dehalogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1735_Mixed,_incl._Alpha/beta_hydrolase_fold-1,_and_L-2-Haloacid_dehalogenase


id: CL:1736
description: Mixed, incl. Alpha/beta hydrolase fold-1, and Xenobiotic catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1736_Mixed,_incl._Alpha/beta_hydrolase_fold-1,_and_Xenobiotic_catabolic_process


id: CL:1737
description: Mixed, incl. Alpha/beta hydrolase fold-1, and Xenobiotic catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1737_Mixed,_incl._Alpha/beta_hydrolase_fold-1,_and_Xenobiotic_catabolic_process


id: CL:1738
description: Alpha/beta hydrolase fold-1, and CdaR, GGDEF-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1738_Alpha/beta_hydrolase_fold-1,_and_CdaR,_GGDEF-like_domain


id: CL:1740
description: Alpha/beta hydrolase fold-1, and CdaR, GGDEF-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1740_Alpha/beta_hydrolase_fold-1,_and_CdaR,_GGDEF-like_domain


id: CL:1741
description: Alpha/beta hydrolase fold, and Serine aminopeptidase, S33
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1741_Alpha/beta_hydrolase_fold,_and_Serine_aminopeptidase,_S33


id: CL:1744
description: Alpha/beta hydrolase fold, and Serine aminopeptidase, S33
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1744_Alpha/beta_hydrolase_fold,_and_Serine_aminopeptidase,_S33


id: CL:1746
description: Mixed, incl. TAP-like protein, and Serine aminopeptidase, S33
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1746_Mixed,_incl._TAP-like_protein,_and_Serine_aminopeptidase,_S33


id: CL:176
description: enoyl-CoA hydratase activity, and Geraniol degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:176_enoyl-CoA_hydratase_activity,_and_Geraniol_degradation


id: CL:1782
description: Mixed, incl. CdaR, GGDEF-like domain, and Serine aminopeptidase, S33
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1782_Mixed,_incl._CdaR,_GGDEF-like_domain,_and_Serine_aminopeptidase,_S33


id: CL:1798
description: Mixed, incl. 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase, and Epoxide hydrolase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1798_Mixed,_incl._2-amino-3-carboxymuconate-6-semialdehyde_decarboxylase,_and_Epoxide_hydrolase-like


id: CL:1809
description: Mixed, incl. L-2-Haloacid dehalogenase, and Xenobiotic catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1809_Mixed,_incl._L-2-Haloacid_dehalogenase,_and_Xenobiotic_catabolic_process


id: CL:1820
description: Mixed, incl. Ether lipid metabolism, and DoxX-like family
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1820_Mixed,_incl._Ether_lipid_metabolism,_and_DoxX-like_family


id: CL:1830
description: Mixed, incl. L-2-Haloacid dehalogenase, and Serine aminopeptidase, S33
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1830_Mixed,_incl._L-2-Haloacid_dehalogenase,_and_Serine_aminopeptidase,_S33


id: CL:1842
description: Mixed, incl. Alcohol dehydrogenase, zinc-type, conserved site, and GroES-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1842_Mixed,_incl._Alcohol_dehydrogenase,_zinc-type,_conserved_site,_and_GroES-like_superfamily


id: CL:1843
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1843_Mixed,_incl._Alcohol_dehydrogenase,_zinc-type,_conserved_site,_and_Iron-type_alcohol_dehydrogenase-like

description:
  Mixed, incl. Alcohol dehydrogenase, zinc-type, conserved site, and Iron-type alcohol dehydrogenase-like


id: CL:1844
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1844_Mixed,_incl._Alcohol_dehydrogenase,_zinc-type,_conserved_site,_and_Iron-type_alcohol_dehydrogenase-like

description:
  Mixed, incl. Alcohol dehydrogenase, zinc-type, conserved site, and Iron-type alcohol dehydrogenase-like


id: CL:1845
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1845_Mixed,_incl._Alcohol_dehydrogenase,_zinc-type,_conserved_site,_and_Iron-type_alcohol_dehydrogenase-like

description:
  Mixed, incl. Alcohol dehydrogenase, zinc-type, conserved site, and Iron-type alcohol dehydrogenase-like


id: CL:1848
description: Zinc-binding dehydrogenase, and Naphthalene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1848_Zinc-binding_dehydrogenase,_and_Naphthalene_degradation


id: CL:1851
description: Zinc-binding dehydrogenase, and Alcohol dehydrogenase (NAD+) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1851_Zinc-binding_dehydrogenase,_and_Alcohol_dehydrogenase_(NAD+)_activity


id: CL:1854
description: Zinc-binding dehydrogenase, and Alcohol dehydrogenase (NAD+) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1854_Zinc-binding_dehydrogenase,_and_Alcohol_dehydrogenase_(NAD+)_activity


id: CL:1875
description: Iron-type alcohol dehydrogenase-like, and Cellular response to aldehyde
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1875_Iron-type_alcohol_dehydrogenase-like,_and_Cellular_response_to_aldehyde


id: CL:1900
description: Mixed, incl. Flavodoxin-like fold, and Sulfuric ester hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1900_Mixed,_incl._Flavodoxin-like_fold,_and_Sulfuric_ester_hydrolase_activity


id: CL:1910
description: Mixed, incl. Putative cyclase, and CdaR, GGDEF-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1910_Mixed,_incl._Putative_cyclase,_and_CdaR,_GGDEF-like_domain


id: CL:1926
description: Mixed, incl. Flavin reductase like domain, and Zinc-binding dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1926_Mixed,_incl._Flavin_reductase_like_domain,_and_Zinc-binding_dehydrogenase


id: CL:194
description: Synthesis and degradation of ketone bodies, and Acetoacetyl-CoA synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:194_Synthesis_and_degradation_of_ketone_bodies,_and_Acetoacetyl-CoA_synthase


id: CL:1941
description: Mixed, incl. Dioxygenase, and Toluene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1941_Mixed,_incl._Dioxygenase,_and_Toluene_degradation


id: CL:1942
description: Mixed, incl. Dioxygenase, and Toluene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1942_Mixed,_incl._Dioxygenase,_and_Toluene_degradation


id: CL:1943
description: Mixed, incl. Coenzyme A transferase, and Protocatechuate 3,4-dioxygenase, alpha subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1943_Mixed,_incl._Coenzyme_A_transferase,_and_Protocatechuate_3,4-dioxygenase,_alpha_subunit


id: CL:1945
description: Protocatechuate 3,4-dioxygenase, alpha subunit, and Intramolecular lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1945_Protocatechuate_3,4-dioxygenase,_alpha_subunit,_and_Intramolecular_lyase_activity


id: CL:1964
description: Dienelactone hydrolase, and Catechol dioxygenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1964_Dienelactone_hydrolase,_and_Catechol_dioxygenase_activity


id: CL:197
description: Synthesis and degradation of ketone bodies
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:197_Synthesis_and_degradation_of_ketone_bodies


id: CL:1977
description: Mixed, incl. CocE/Serine esterase, and Catechol dioxygenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1977_Mixed,_incl._CocE/Serine_esterase,_and_Catechol_dioxygenase_activity


id: CL:1991
description: Mixed, incl. Xylene degradation, and Aldolase/RraA
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1991_Mixed,_incl._Xylene_degradation,_and_Aldolase/RraA


id: CL:1992
description: Mixed, incl. Xylene degradation, and Fumarylacetoacetase-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1992_Mixed,_incl._Xylene_degradation,_and_Fumarylacetoacetase-like,_C-terminal


id: CL:1993
description: Mixed, incl. Xylene degradation, and Tautomerase enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1993_Mixed,_incl._Xylene_degradation,_and_Tautomerase_enzyme


id: CL:1995
description: Mixed, incl. Dioxin degradation, and Catechol 2,3 dioxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1995_Mixed,_incl._Dioxin_degradation,_and_Catechol_2,3_dioxygenase


id: CL:1998
description: Dioxin degradation, and Catechol 2,3 dioxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:1998_Dioxin_degradation,_and_Catechol_2,3_dioxygenase


id: CL:2025
description: Mixed, incl. Fumarylacetoacetase-like, C-terminal, and Imidazolonepropionase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2025_Mixed,_incl._Fumarylacetoacetase-like,_C-terminal,_and_Imidazolonepropionase_activity


id: CL:2036
description: Mixed, incl. Protein of unknown function DUF485, and Sodium/solute symporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2036_Mixed,_incl._Protein_of_unknown_function_DUF485,_and_Sodium/solute_symporter


id: CL:2052
description: Mixed, incl. Aldolase/RraA, and Deoxyribonuclease, TatD-related, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2052_Mixed,_incl._Aldolase/RraA,_and_Deoxyribonuclease,_TatD-related,_conserved_site


id: CL:2054
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2054_Mixed,_incl._Deoxyribonuclease,_TatD-related,_conserved_site,_and_Extradiol_ring-cleavage_dioxygenase,_class_III_enzyme,_subunit_B

description:
  Mixed, incl. Deoxyribonuclease, TatD-related, conserved site, and Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B


id: CL:2076
description: Mixed, incl. Lipid biosynthetic process, and Cytochrome P450 superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2076_Mixed,_incl._Lipid_biosynthetic_process,_and_Cytochrome_P450_superfamily


id: CL:2077
description: Mixed, incl. ANL, N-terminal domain, and Cytochrome P450 superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2077_Mixed,_incl._ANL,_N-terminal_domain,_and_Cytochrome_P450_superfamily


id: CL:2078
description: Mixed, incl. ANL, N-terminal domain, and Cytochrome P450 superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2078_Mixed,_incl._ANL,_N-terminal_domain,_and_Cytochrome_P450_superfamily


id: CL:2079
description: Mixed, incl. ANL, N-terminal domain, and Cytochrome P450 superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2079_Mixed,_incl._ANL,_N-terminal_domain,_and_Cytochrome_P450_superfamily


id: CL:2080
description: Mixed, incl. ANL, N-terminal domain, and Cytochrome P450 superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2080_Mixed,_incl._ANL,_N-terminal_domain,_and_Cytochrome_P450_superfamily


id: CL:2081
description: Mixed, incl. ANL, N-terminal domain, and Cytochrome P450 superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2081_Mixed,_incl._ANL,_N-terminal_domain,_and_Cytochrome_P450_superfamily


id: CL:2083
description: Mixed, incl. AMP-binding enzyme C-terminal domain, and Cytochrome P450, B-class
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2083_Mixed,_incl._AMP-binding_enzyme_C-terminal_domain,_and_Cytochrome_P450,_B-class


id: CL:2085
description: Mixed, incl. AMP-binding enzyme C-terminal domain, and Cytochrome P450, B-class
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2085_Mixed,_incl._AMP-binding_enzyme_C-terminal_domain,_and_Cytochrome_P450,_B-class


id: CL:2088
description: Cytochrome P450, B-class, and AMP-binding enzyme C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2088_Cytochrome_P450,_B-class,_and_AMP-binding_enzyme_C-terminal_domain


id: CL:2090
description: Cytochrome P450, B-class, and AMP-binding enzyme C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2090_Cytochrome_P450,_B-class,_and_AMP-binding_enzyme_C-terminal_domain


id: CL:2094
description: Cytochrome P450, B-class, and Acid phosphatase homologues
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2094_Cytochrome_P450,_B-class,_and_Acid_phosphatase_homologues


id: CL:2097
description: Cytochrome P450, B-class, and Acid phosphatase homologues
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2097_Cytochrome_P450,_B-class,_and_Acid_phosphatase_homologues


id: CL:2143
description: Mixed, incl. Acetyltransferase complex, and Helicase XPB/Ssl2, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2143_Mixed,_incl._Acetyltransferase_complex,_and_Helicase_XPB/Ssl2,_N-terminal_domain


id: CL:215
description: DUF35 OB-fold domain, acyl-CoA-associated, and Lipid oxidation
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:215_DUF35_OB-fold_domain,_acyl-CoA-associated,_and_Lipid_oxidation


id: CL:2163
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2163_Mixed,_incl._Biosynthesis_of_siderophore_group_nonribosomal_peptides,_and_Amino_acid_adenylation_domain

description:
  Mixed, incl. Biosynthesis of siderophore group nonribosomal peptides, and Amino acid adenylation domain


id: CL:2166
description: Biosynthesis of siderophore group nonribosomal peptides, and Amino acid adenylation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2166_Biosynthesis_of_siderophore_group_nonribosomal_peptides,_and_Amino_acid_adenylation_domain


id: CL:2169
description: ACP-like superfamily, and Siderophore biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2169_ACP-like_superfamily,_and_Siderophore_biosynthetic_process


id: CL:2214
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2214_Mixed,_incl._3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III,_and_Steroid_dehydrogenase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor

description:
  Mixed, incl. 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, and Steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor


id: CL:2216
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2216_Mixed,_incl._3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III,_and_Steroid_dehydrogenase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor

description:
  Mixed, incl. 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, and Steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor


id: CL:2234
description: Mixed, incl. FAD-binding domain, and Steroid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2234_Mixed,_incl._FAD-binding_domain,_and_Steroid_biosynthesis


id: CL:2235
description: Mixed, incl. Phenazine biosynthesis, and Steroid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2235_Mixed,_incl._Phenazine_biosynthesis,_and_Steroid_biosynthesis


id: CL:2237
description: Mixed, incl. Steroid biosynthesis, and Diacylglycerol kinase catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2237_Mixed,_incl._Steroid_biosynthesis,_and_Diacylglycerol_kinase_catalytic_domain


id: CL:2254
description: Mixed, incl. Acyltransferase family, and Ferrous iron binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2254_Mixed,_incl._Acyltransferase_family,_and_Ferrous_iron_binding


id: CL:2270
description: Mixed, incl. Capsule organization, and GtrA-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2270_Mixed,_incl._Capsule_organization,_and_GtrA-like_protein


id: CL:2272
description: Mixed, incl. GtrA-like protein, and UbiA prenyltransferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2272_Mixed,_incl._GtrA-like_protein,_and_UbiA_prenyltransferase_family


id: CL:2295
description: Mostly uncharacterized, incl. SWIM zinc finger, and Terpene metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2295_Mostly_uncharacterized,_incl._SWIM_zinc_finger,_and_Terpene_metabolic_process


id: CL:2299
description: Mixed, incl. SWIM zinc finger, and AAA domain (dynein-related subfamily)
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2299_Mixed,_incl._SWIM_zinc_finger,_and_AAA_domain_(dynein-related_subfamily)


id: CL:230
description: Electron transfer flavoprotein domain, and Acyl-CoA dehydrogenase/oxidase C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:230_Electron_transfer_flavoprotein_domain,_and_Acyl-CoA_dehydrogenase/oxidase_C-terminal


id: CL:2312
description: Mixed, incl. Terpene metabolic process, and Biosynthesis of enediyne antibiotics
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2312_Mixed,_incl._Terpene_metabolic_process,_and_Biosynthesis_of_enediyne_antibiotics


id: CL:232
description: Mixed, incl. Electron transfer flavoprotein domain, and Acyl-CoA dehydrogenase, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:232_Mixed,_incl._Electron_transfer_flavoprotein_domain,_and_Acyl-CoA_dehydrogenase,_C-terminal_domain


id: CL:2324
description: Mixed, incl. Isoprenoid biosynthetic process, and Menaquinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2324_Mixed,_incl._Isoprenoid_biosynthetic_process,_and_Menaquinone_metabolic_process


id: CL:2325
description: Isoprenoid biosynthetic process, and Menaquinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2325_Isoprenoid_biosynthetic_process,_and_Menaquinone_metabolic_process


id: CL:2329
description: Carotenoid biosynthetic process, and Polyprenyl synthetase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2329_Carotenoid_biosynthetic_process,_and_Polyprenyl_synthetase


id: CL:234
description: Electron transfer flavoprotein domain, and NADH:flavin oxidoreductase / NADH oxidase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:234_Electron_transfer_flavoprotein_domain,_and_NADH:flavin_oxidoreductase_/_NADH_oxidase_family


id: CL:2365
description: Mixed, incl. Menaquinone biosynthesis, and UbiE/COQ5 methyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2365_Mixed,_incl._Menaquinone_biosynthesis,_and_UbiE/COQ5_methyltransferase


id: CL:2367
description: Menaquinone biosynthesis, and 1,4-dihydroxy-2-naphthoyl-CoA thioesterase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2367_Menaquinone_biosynthesis,_and_1,4-dihydroxy-2-naphthoyl-CoA_thioesterase_activity


id: CL:2387
description: Mixed, incl. Biotin metabolic process, and ubiE/COQ5 methyltransferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2387_Mixed,_incl._Biotin_metabolic_process,_and_ubiE/COQ5_methyltransferase_family


id: CL:2421
description: Translation, and RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2421_Translation,_and_RNA_metabolic_process


id: CL:2422
description: Mixed, incl. Translation, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2422_Mixed,_incl._Translation,_and_Protein_transport


id: CL:2423
description: Translation, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2423_Translation,_and_Protein_transport


id: CL:2424
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2424_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:2426
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2426_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:2429
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2429_Ribosome,_and_Regulation_of_translation


id: CL:2430
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2430_Ribosome,_and_Regulation_of_translation


id: CL:2432
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2432_Ribosome,_and_Regulation_of_translation


id: CL:2435
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2435_Ribosome,_and_Translation_regulator_activity


id: CL:2438
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2438_Ribosome,_and_Translation_regulator_activity


id: CL:2441
description: Structural constituent of ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2441_Structural_constituent_of_ribosome,_and_Translation_regulator_activity


id: CL:2443
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2443_Structural_constituent_of_ribosome


id: CL:2447
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2447_Structural_constituent_of_ribosome


id: CL:2450
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2450_Structural_constituent_of_ribosome


id: CL:2451
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2451_Structural_constituent_of_ribosome


id: CL:2453
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2453_Structural_constituent_of_ribosome


id: CL:2454
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2454_Structural_constituent_of_ribosome


id: CL:2455
description: Small ribosomal subunit, and Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2455_Small_ribosomal_subunit,_and_Structural_constituent_of_ribosome


id: CL:2457
description: Small ribosomal subunit, and tRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2457_Small_ribosomal_subunit,_and_tRNA-binding


id: CL:246
description: Acyl-CoA dehydrogenase, C-terminal domain, and Acyl-CoA dehydrogenase, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:246_Acyl-CoA_dehydrogenase,_C-terminal_domain,_and_Acyl-CoA_dehydrogenase,_C-terminal_domain


id: CL:2480
description: Mixed, incl. Translation protein SH3-like domain superfamily, and Translation regulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2480_Mixed,_incl._Translation_protein_SH3-like_domain_superfamily,_and_Translation_regulation


id: CL:2498
description: Mixed, incl. Large ribosomal subunit, and KOW (Kyprides, Ouzounis, Woese) motif.
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2498_Mixed,_incl._Large_ribosomal_subunit,_and_KOW_(Kyprides,_Ouzounis,_Woese)_motif.


id: CL:2537
description: Mixed, incl. Zinc-binding ribosomal protein, and L28p-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2537_Mixed,_incl._Zinc-binding_ribosomal_protein,_and_L28p-like


id: CL:2623
description: Mixed, incl. RNA polymerase, and DNA-templated transcription, termination
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2623_Mixed,_incl._RNA_polymerase,_and_DNA-templated_transcription,_termination


id: CL:2624
description: RNA polymerase, and Sigma-70 factor, region 1.2
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2624_RNA_polymerase,_and_Sigma-70_factor,_region_1.2


id: CL:263
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:263_Acyl-CoA_dehydrogenase_family_member_10/11,_N-terminal,_and_Acyl-CoA_dehydrogenase/oxidase,_N-terminal

description:
  Acyl-CoA dehydrogenase family member 10/11, N-terminal, and Acyl-CoA dehydrogenase/oxidase, N-terminal


id: CL:2643
description: DNA-templated transcription, termination
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2643_DNA-templated_transcription,_termination


id: CL:265
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:265_Acyl-CoA_dehydrogenase_family_member_10/11,_N-terminal,_and_Acyl-CoA_dehydrogenase,_C-terminal_domain

description:
  Acyl-CoA dehydrogenase family member 10/11, N-terminal, and Acyl-CoA dehydrogenase, C-terminal domain


id: CL:2655
description: Ribosomal small subunit biogenesis, and PUA domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2655_Ribosomal_small_subunit_biogenesis,_and_PUA_domain_superfamily


id: CL:2671
description: Aminoacyl-tRNA synthetase, class II, and phenylalanyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2671_Aminoacyl-tRNA_synthetase,_class_II,_and_phenylalanyl-tRNA_aminoacylation


id: CL:2691
description: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2691_Aminoacyl-tRNA_synthetase,_class_Ia,_anticodon-binding


id: CL:2708
description: Protein targeting to ER, and Translocation
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2708_Protein_targeting_to_ER,_and_Translocation


id: CL:2728
description: Mixed, incl. Ribosome biogenesis, and Peptidyl-proline modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2728_Mixed,_incl._Ribosome_biogenesis,_and_Peptidyl-proline_modification


id: CL:2729
description: Mixed, incl. RNA catabolic process, and Peptidyl-proline modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2729_Mixed,_incl._RNA_catabolic_process,_and_Peptidyl-proline_modification


id: CL:2732
description: Mixed, incl. 3-5 exonuclease, and Helicase-associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2732_Mixed,_incl._3-5_exonuclease,_and_Helicase-associated_domain


id: CL:2748
description: Exoribonuclease activity, producing 5-phosphomonoesters, and S1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2748_Exoribonuclease_activity,_producing_5-phosphomonoesters,_and_S1_domain


id: CL:2765
description: Pseudouridine synthase, RluA-like, conserved site, and SpoU rRNA Methylase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2765_Pseudouridine_synthase,_RluA-like,_conserved_site,_and_SpoU_rRNA_Methylase_family


id: CL:2780
description: Mixed, incl. Methyltransferase HemK-like, and TGS-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2780_Mixed,_incl._Methyltransferase_HemK-like,_and_TGS-like


id: CL:279
description: Mixed, incl. Thiolase, N-terminal domain, and Acyl-CoA dehydrogenase, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:279_Mixed,_incl._Thiolase,_N-terminal_domain,_and_Acyl-CoA_dehydrogenase,_C-terminal_domain


id: CL:2792
description: Mixed, incl. Protein folding, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2792_Mixed,_incl._Protein_folding,_and_ATP-dependent_peptidase_activity


id: CL:2793
description: Mixed, incl. Protein folding, and Type 1 protein exporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2793_Mixed,_incl._Protein_folding,_and_Type_1_protein_exporter


id: CL:2795
description: Protein folding, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2795_Protein_folding,_and_ATP-dependent_peptidase_activity


id: CL:2817
description: Hsp70 protein, and Stress response
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2817_Hsp70_protein,_and_Stress_response


id: CL:2837
description: Clp protease, and HslUV protease complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2837_Clp_protease,_and_HslUV_protease_complex


id: CL:2859
description: Mixed, incl. Type 1 protein exporter, and YqgF/RNase H-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2859_Mixed,_incl._Type_1_protein_exporter,_and_YqgF/RNase_H-like_domain


id: CL:2861
description: Mixed, incl. Type 1 protein exporter, and YqgF/RNase H-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2861_Mixed,_incl._Type_1_protein_exporter,_and_YqgF/RNase_H-like_domain


id: CL:2863
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2863_Mixed,_incl._AAA_ATPase,_AAA+_lid_domain,_and_Concanavalin_A-like_lectin/glucanase_domain_superfamily

description:
  Mixed, incl. AAA ATPase, AAA+ lid domain, and Concanavalin A-like lectin/glucanase domain superfamily


id: CL:290
description: Geraniol degradation, and Acyl-CoA dehydrogenase, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:290_Geraniol_degradation,_and_Acyl-CoA_dehydrogenase,_C-terminal_domain


id: CL:2911
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2911_Mixed,_incl._Ribosomal_RNA_adenine_dimethylases,_and_Deoxyribonuclease,_TatD-related,_conserved_site

description:
  Mixed, incl. Ribosomal RNA adenine dimethylases, and Deoxyribonuclease, TatD-related, conserved site


id: CL:2926
description: Catalytic activity, acting on DNA, and DNA repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2926_Catalytic_activity,_acting_on_DNA,_and_DNA_repair


id: CL:2927
description: Catalytic activity, acting on DNA, and DNA repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2927_Catalytic_activity,_acting_on_DNA,_and_DNA_repair


id: CL:2928
description: Catalytic activity, acting on DNA, and DNA repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2928_Catalytic_activity,_acting_on_DNA,_and_DNA_repair


id: CL:2929
description: Catalytic activity, acting on DNA, and DNA repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2929_Catalytic_activity,_acting_on_DNA,_and_DNA_repair


id: CL:2932
description: DNA repair, and DNA repair complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2932_DNA_repair,_and_DNA_repair_complex


id: CL:2933
description: DNA repair, and DNA repair complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2933_DNA_repair,_and_DNA_repair_complex


id: CL:2934
description: Mixed, incl. Exonuclease, and DNA helicase, ATP-dependent, RecQ type
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2934_Mixed,_incl._Exonuclease,_and_DNA_helicase,_ATP-dependent,_RecQ_type


id: CL:2936
description: Mixed, incl. 5-3 exonuclease, and DNA helicase, ATP-dependent, RecQ type
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2936_Mixed,_incl._5-3_exonuclease,_and_DNA_helicase,_ATP-dependent,_RecQ_type


id: CL:2938
description: DNA helicase, ATP-dependent, RecQ type, and Topoisomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2938_DNA_helicase,_ATP-dependent,_RecQ_type,_and_Topoisomerase


id: CL:2970
description: SOS response, and DNA damage sensor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:2970_SOS_response,_and_DNA_damage_sensor_activity


id: CL:3009
description: DNA negative supercoiling activity, and DNA clamp superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3009_DNA_negative_supercoiling_activity,_and_DNA_clamp_superfamily


id: CL:3024
description: DNA polymerase complex, and GIY-YIG endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3024_DNA_polymerase_complex,_and_GIY-YIG_endonuclease


id: CL:3072
description: Mixed, incl. DNA dealkylation, and Endonuclease III
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3072_Mixed,_incl._DNA_dealkylation,_and_Endonuclease_III


id: CL:308
description: Mixed, incl. AMP-dependent ligase, C-terminal, and Phenylacetate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:308_Mixed,_incl._AMP-dependent_ligase,_C-terminal,_and_Phenylacetate_catabolic_process


id: CL:3104
description: Mixed, incl. HNH nuclease, and MerR HTH family regulatory protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3104_Mixed,_incl._HNH_nuclease,_and_MerR_HTH_family_regulatory_protein


id: CL:3113
description: Mixed, incl. Chromosome partition, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3113_Mixed,_incl._Chromosome_partition,_and_AAA_domain


id: CL:3115
description: Mixed, incl. Chromosome partition, and CMP kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3115_Mixed,_incl._Chromosome_partition,_and_CMP_kinase_activity


id: CL:313
description: Phenylacetic acid catabolic protein, and MIP18 family-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:313_Phenylacetic_acid_catabolic_protein,_and_MIP18_family-like


id: CL:3135
description: Mixed, incl. Outer membrane, and HAD-hyrolase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3135_Mixed,_incl._Outer_membrane,_and_HAD-hyrolase-like


id: CL:3138
description: Mixed, incl. HAD-hyrolase-like, and Ribosomal RNA methyltransferase, FtsJ domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3138_Mixed,_incl._HAD-hyrolase-like,_and_Ribosomal_RNA_methyltransferase,_FtsJ_domain


id: CL:3154
description: Mixed, incl. Cell cycle, and ncRNA processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3154_Mixed,_incl._Cell_cycle,_and_ncRNA_processing


id: CL:3155
description: Mixed, incl. Cell cycle, and ncRNA processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3155_Mixed,_incl._Cell_cycle,_and_ncRNA_processing


id: CL:3156
description: Mixed, incl. Cell cycle, and Peptidase M23
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3156_Mixed,_incl._Cell_cycle,_and_Peptidase_M23


id: CL:3157
description: Mixed, incl. Cell cycle, and Transglycosylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3157_Mixed,_incl._Cell_cycle,_and_Transglycosylase


id: CL:3158
description: Mixed, incl. Cell cycle, and Transglycosylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3158_Mixed,_incl._Cell_cycle,_and_Transglycosylase


id: CL:3164
description: Cell shape, and Penicillin-binding Protein dimerisation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3164_Cell_shape,_and_Penicillin-binding_Protein_dimerisation_domain


id: CL:3168
description: Mur ligase, central, and Glycosyl transferase family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3168_Mur_ligase,_central,_and_Glycosyl_transferase_family_4


id: CL:3206
description: Penicillin binding protein transpeptidase domain, and DivIVA family
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3206_Penicillin_binding_protein_transpeptidase_domain,_and_DivIVA_family


id: CL:3224
description: tRNA threonylcarbamoyladenosine modification, and N-terminal protein amino acid acetylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3224_tRNA_threonylcarbamoyladenosine_modification,_and_N-terminal_protein_amino_acid_acetylation


id: CL:3235
description: Mixed, incl. Anion:anion antiporter activity, and Aspartic-type peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3235_Mixed,_incl._Anion:anion_antiporter_activity,_and_Aspartic-type_peptidase_activity


id: CL:3244
description: Mixed, incl. Peptidase M23, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3244_Mixed,_incl._Peptidase_M23,_and_DNA_integration


id: CL:3246
description: Mixed, incl. DNA integration, and Magnesium-chelatase subunit ChlI-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3246_Mixed,_incl._DNA_integration,_and_Magnesium-chelatase_subunit_ChlI-like


id: CL:3268
description: Mixed, incl. Cell pole, and RNA 5-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3268_Mixed,_incl._Cell_pole,_and_RNA_5-end_processing


id: CL:3282
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3282_Mixed,_incl._ABC3_transporter_permease_protein_domain,_and_ABC_transporter,_lipoprotein_release,_LolD-like

description:
  Mixed, incl. ABC3 transporter permease protein domain, and ABC transporter, lipoprotein release, LolD-like


id: CL:3294
description: Mixed, incl. RNA 5-end processing, and Lytic endotransglycosylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3294_Mixed,_incl._RNA_5-end_processing,_and_Lytic_endotransglycosylase_activity


id: CL:3305
description: Mixed, incl. Elp3/MiaA/NifB-like, radical SAM core domain, and Cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3305_Mixed,_incl._Elp3/MiaA/NifB-like,_radical_SAM_core_domain,_and_Cyclase_activity


id: CL:3307
description: Mixed, incl. Methylthiotransferase, and Catalytic LigB subunit of aromatic ring-opening dioxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3307_Mixed,_incl._Methylthiotransferase,_and_Catalytic_LigB_subunit_of_aromatic_ring-opening_dioxygenase


id: CL:3335
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3335_Mixed,_incl._Nucleoside_monophosphate_metabolic_process,_and_Folic_acid-containing_compound_metabolic_process

description:
  Mixed, incl. Nucleoside monophosphate metabolic process, and Folic acid-containing compound metabolic process


id: CL:3336
description: Mixed, incl. Nucleoside monophosphate metabolic process, and Tetrahydrofolate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3336_Mixed,_incl._Nucleoside_monophosphate_metabolic_process,_and_Tetrahydrofolate_metabolic_process


id: CL:3337
description: Ribonucleoside monophosphate metabolic process, and CBS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3337_Ribonucleoside_monophosphate_metabolic_process,_and_CBS_domain


id: CL:3338
description: Ribonucleoside monophosphate metabolic process, and CBS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3338_Ribonucleoside_monophosphate_metabolic_process,_and_CBS_domain


id: CL:3339
description: Ribonucleoside monophosphate metabolic process, and Nucleoside metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3339_Ribonucleoside_monophosphate_metabolic_process,_and_Nucleoside_metabolic_process


id: CL:3340
description: Ribonucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3340_Ribonucleoside_monophosphate_metabolic_process


id: CL:3341
description: Purine biosynthesis, and IMP dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3341_Purine_biosynthesis,_and_IMP_dehydrogenase_activity


id: CL:3345
description: Phosphoribosylformylglycinamidine synthase activity, and Purine nucleobase biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3345_Phosphoribosylformylglycinamidine_synthase_activity,_and_Purine_nucleobase_biosynthetic_process


id: CL:3367
description: Mixed, incl. GMP biosynthesis, and Ribonucleotide catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3367_Mixed,_incl._GMP_biosynthesis,_and_Ribonucleotide_catabolic_process


id: CL:338
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:338_Mixed,_incl._Carbon_monoxide_dehydrogenase_subunit_G,_and_Enoyl-CoA_hydratase/isomerase,_conserved_site

description:
  Mixed, incl. Carbon monoxide dehydrogenase subunit G, and Enoyl-CoA hydratase/isomerase, conserved site


id: CL:3382
description: De novo UMP biosynthetic process, and Globin
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3382_De_novo_UMP_biosynthetic_process,_and_Globin


id: CL:3404
description: Mixed, incl. UMP salvage, and Nucleoside metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3404_Mixed,_incl._UMP_salvage,_and_Nucleoside_metabolic_process


id: CL:3405
description: UMP salvage, and Nucleoside catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3405_UMP_salvage,_and_Nucleoside_catabolic_process


id: CL:3416
description: Adenosine deaminase activity, and Carbohydrate/purine kinase, PfkB, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3416_Adenosine_deaminase_activity,_and_Carbohydrate/purine_kinase,_PfkB,_conserved_site


id: CL:3432
description: CBS domain, and Asp/Glu/Hydantoin racemase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3432_CBS_domain,_and_Asp/Glu/Hydantoin_racemase


id: CL:3447
description: Mixed, incl. Nucleotide catabolic process, and Short chain dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3447_Mixed,_incl._Nucleotide_catabolic_process,_and_Short_chain_dehydrogenase


id: CL:3458
description: One carbon pool by folate, and Deoxyribonucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3458_One_carbon_pool_by_folate,_and_Deoxyribonucleoside_monophosphate_metabolic_process


id: CL:3459
description: Dihydrofolate reductase activity, and Deoxyribonucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3459_Dihydrofolate_reductase_activity,_and_Deoxyribonucleoside_monophosphate_metabolic_process


id: CL:3461
description: Deoxyribonucleoside monophosphate metabolic process, and Thymidylate kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3461_Deoxyribonucleoside_monophosphate_metabolic_process,_and_Thymidylate_kinase


id: CL:3484
description: Formyl transferase, and Tetrahydrofolate interconversion
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3484_Formyl_transferase,_and_Tetrahydrofolate_interconversion


id: CL:3505
description: Mixed, incl. Riboflavin metabolic process, and Cellular modified amino acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3505_Mixed,_incl._Riboflavin_metabolic_process,_and_Cellular_modified_amino_acid_biosynthetic_process


id: CL:3506
description: Riboflavin metabolic process, and Acyl-CoA dehydrogenase, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3506_Riboflavin_metabolic_process,_and_Acyl-CoA_dehydrogenase,_C-terminal_domain


id: CL:3508
description: Riboflavin metabolic process, and TGS-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3508_Riboflavin_metabolic_process,_and_TGS-like


id: CL:3543
description: Acyl-CoA dehydrogenase, C-terminal domain, and Flavin reductase like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3543_Acyl-CoA_dehydrogenase,_C-terminal_domain,_and_Flavin_reductase_like_domain


id: CL:3557
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3557_Mixed,_incl._Pantothenate_metabolic_process,_and_Folic_acid-containing_compound_biosynthetic_process

description:
  Mixed, incl. Pantothenate metabolic process, and Folic acid-containing compound biosynthetic process


id: CL:3558
description: Pantothenate metabolic process, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3558_Pantothenate_metabolic_process,_and_Coenzyme_A_biosynthesis


id: CL:3579
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3579_Folate_biosynthesis,_and_GTP_cyclohydrolase_I,_C-terminal/NADPH-dependent_7-cyano-7-deazaguanine_reductase

description:
  Folate biosynthesis, and GTP cyclohydrolase I, C-terminal/NADPH-dependent 7-cyano-7-deazaguanine reductase


id: CL:358
description: Mixed, incl. alpha-Linolenic acid metabolism, and FAD dependent oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:358_Mixed,_incl._alpha-Linolenic_acid_metabolism,_and_FAD_dependent_oxidoreductase


id: CL:3594
description: Biosynthesis of amino acids, and One-carbon metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3594_Biosynthesis_of_amino_acids,_and_One-carbon_metabolic_process


id: CL:3597
description: Branched-chain amino acid metabolic process, and Cysteine and methionine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3597_Branched-chain_amino_acid_metabolic_process,_and_Cysteine_and_methionine_metabolism


id: CL:3598
description: Branched-chain amino acid metabolic process, and L-serine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3598_Branched-chain_amino_acid_metabolic_process,_and_L-serine_metabolic_process


id: CL:3599
description: Branched-chain amino acid metabolic process, and Threonine synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3599_Branched-chain_amino_acid_metabolic_process,_and_Threonine_synthase_activity


id: CL:3601
description: Branched-chain amino acid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3601_Branched-chain_amino_acid_biosynthesis


id: CL:3604
description: Leucine biosynthesis, and Valine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3604_Leucine_biosynthesis,_and_Valine_metabolic_process


id: CL:3645
description: L-serine biosynthetic process, and Serine hydroxymethyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3645_L-serine_biosynthetic_process,_and_Serine_hydroxymethyltransferase


id: CL:3661
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3661_Mixed,_incl._Methionine_metabolic_process,_and_Cys/Met_metabolism,_pyridoxal_phosphate-dependent_enzyme

description:
  Mixed, incl. Methionine metabolic process, and Cys/Met metabolism, pyridoxal phosphate-dependent enzyme


id: CL:3662
description: Methionine biosynthetic process, and Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3662_Methionine_biosynthetic_process,_and_Cys/Met_metabolism,_pyridoxal_phosphate-dependent_enzyme


id: CL:3663
description: S-methyltransferase activity, and Methylenetetrahydrofolate reductase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3663_S-methyltransferase_activity,_and_Methylenetetrahydrofolate_reductase-like


id: CL:3664
description: B12 binding domain, and Methylenetetrahydrofolate reductase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3664_B12_binding_domain,_and_Methylenetetrahydrofolate_reductase-like


id: CL:3673
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3673_Cobalamin-independent_methionine_synthase_MetE,_C-terminal/archaeal,_and_S-adenosylmethionine_synthetase

description:
  Cobalamin-independent methionine synthase MetE, C-terminal/archaeal, and S-adenosylmethionine synthetase


id: CL:3682
description: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme, and O-acetyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3682_Cys/Met_metabolism,_pyridoxal_phosphate-dependent_enzyme,_and_O-acetyltransferase_activity


id: CL:3684
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3684_Cys/Met_metabolism,_pyridoxal_phosphate-dependent_enzyme,_and_Cysteine_synthase/cystathionine_beta-synthase,_pyridoxal-phosphate_attachment_site

description:
  Cys/Met metabolism, pyridoxal phosphate-dependent enzyme, and Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site


id: CL:3703
description: Mixed, incl. S-adenosylmethionine synthetase, and Formyltetrahydrofolate deformylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3703_Mixed,_incl._S-adenosylmethionine_synthetase,_and_Formyltetrahydrofolate_deformylase


id: CL:3719
description: Amino-acid biosynthesis, and Aminotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3719_Amino-acid_biosynthesis,_and_Aminotransferase


id: CL:372
description: Mixed, incl. Ketone body metabolic process, and Alcohol dehydrogenase, zinc-type, actinomycetes
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:372_Mixed,_incl._Ketone_body_metabolic_process,_and_Alcohol_dehydrogenase,_zinc-type,_actinomycetes


id: CL:3720
description: Aromatic amino acid family biosynthetic process, and Histidine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3720_Aromatic_amino_acid_family_biosynthetic_process,_and_Histidine_biosynthetic_process


id: CL:3721
description: Aromatic amino acid family biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3721_Aromatic_amino_acid_family_biosynthetic_process


id: CL:3722
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3722_Chorismate_metabolic_process,_and_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway

description:
  Chorismate metabolic process, and Aromatic amino acid family biosynthetic process, prephenate pathway


id: CL:3781
description: Mixed, incl. Arginine biosynthetic process, and Lysine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3781_Mixed,_incl._Arginine_biosynthetic_process,_and_Lysine_biosynthesis


id: CL:3782
description: Arginine biosynthetic process, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3782_Arginine_biosynthetic_process,_and_Acetyltransferase_(GNAT)_domain


id: CL:3784
description: Arginine biosynthesis, and Argininosuccinate lyase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3784_Arginine_biosynthesis,_and_Argininosuccinate_lyase


id: CL:3814
description: Lysine biosynthesis, and ACT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3814_Lysine_biosynthesis,_and_ACT_domain


id: CL:3841
description: Mixed, incl. Lrp/AsnC ligand binding domain, and Novobiocin biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3841_Mixed,_incl._Lrp/AsnC_ligand_binding_domain,_and_Novobiocin_biosynthesis


id: CL:3851
description: Mixed, incl. Pyridine nucleotide metabolic process, and AraR-like, winged helix DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3851_Mixed,_incl._Pyridine_nucleotide_metabolic_process,_and_AraR-like,_winged_helix_DNA-binding_domain


id: CL:3852
description: Mixed, incl. Pyridine nucleotide metabolic process, and AraR-like, winged helix DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3852_Mixed,_incl._Pyridine_nucleotide_metabolic_process,_and_AraR-like,_winged_helix_DNA-binding_domain


id: CL:3854
description: Mixed, incl. Pyridine nucleotide metabolic process, and AraR-like, winged helix DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3854_Mixed,_incl._Pyridine_nucleotide_metabolic_process,_and_AraR-like,_winged_helix_DNA-binding_domain


id: CL:3855
description: Pyridine nucleotide metabolic process, and AraR-like, winged helix DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3855_Pyridine_nucleotide_metabolic_process,_and_AraR-like,_winged_helix_DNA-binding_domain


id: CL:3856
description: Pyridine nucleotide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3856_Pyridine_nucleotide_metabolic_process


id: CL:3859
description: Pyridine nucleotide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3859_Pyridine_nucleotide_metabolic_process


id: CL:3875
description: AraR-like, winged helix DNA-binding domain, and NAD biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3875_AraR-like,_winged_helix_DNA-binding_domain,_and_NAD_biosynthetic_process


id: CL:388
description: Mixed, incl. Thiolase, N-terminal domain, and Asp/Glu/hydantoin racemase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:388_Mixed,_incl._Thiolase,_N-terminal_domain,_and_Asp/Glu/hydantoin_racemase


id: CL:3887
description: Mixed, incl. Alanine dehydrogenase/PNT, N-terminal domain, and Sir2 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3887_Mixed,_incl._Alanine_dehydrogenase/PNT,_N-terminal_domain,_and_Sir2_family


id: CL:3904
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3904_Mixed,_incl._UTP_metabolic_process,_and_Ribosomal_RNA_large_subunit_methyltransferase_K/L-like,_FLD_domain

description:
  Mixed, incl. UTP metabolic process, and Ribosomal RNA large subunit methyltransferase K/L-like, FLD domain


id: CL:3913
description: CMP kinase activity, and Haloacid dehalogenase-like hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3913_CMP_kinase_activity,_and_Haloacid_dehalogenase-like_hydrolase


id: CL:3922
description: Mixed, incl. Glycerophospholipid metabolism, and CNNM, transmembrane domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3922_Mixed,_incl._Glycerophospholipid_metabolism,_and_CNNM,_transmembrane_domain


id: CL:3923
description: Glycerophospholipid metabolism, and Inositol monophosphatase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3923_Glycerophospholipid_metabolism,_and_Inositol_monophosphatase-like


id: CL:3925
description: Phosphate acyltransferases, and glycerol-3-phosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3925_Phosphate_acyltransferases,_and_glycerol-3-phosphate_metabolic_process


id: CL:3928
description: Phosphatidic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3928_Phosphatidic_acid_metabolic_process


id: CL:3951
description: CDP-alcohol phosphatidyltransferase, and CDP-diacylglycerol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3951_CDP-alcohol_phosphatidyltransferase,_and_CDP-diacylglycerol_metabolic_process


id: CL:3969
description: Inositol monophosphatase-like, and Polyol biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3969_Inositol_monophosphatase-like,_and_Polyol_biosynthetic_process


id: CL:3980
description: Mixed, incl. CNNM, transmembrane domain, and dGTPase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3980_Mixed,_incl._CNNM,_transmembrane_domain,_and_dGTPase_activity


id: CL:3981
description: Mixed, incl. Ion transporter-like, CBS domain, and Ribosome biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3981_Mixed,_incl._Ion_transporter-like,_CBS_domain,_and_Ribosome_biogenesis


id: CL:3983
description: Ribosome biogenesis, and PhoH-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:3983_Ribosome_biogenesis,_and_PhoH-like_protein


id: CL:4004
description: CNNM, transmembrane domain, and Mycothiol maleylpyruvate isomerase N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4004_CNNM,_transmembrane_domain,_and_Mycothiol_maleylpyruvate_isomerase_N-terminal_domain


id: CL:4019
description: Mixed, incl. Pentose phosphate pathway, and Amino sugar and nucleotide sugar metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4019_Mixed,_incl._Pentose_phosphate_pathway,_and_Amino_sugar_and_nucleotide_sugar_metabolism


id: CL:4020
description: Mixed, incl. Pentose phosphate pathway, and Amino sugar and nucleotide sugar metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4020_Mixed,_incl._Pentose_phosphate_pathway,_and_Amino_sugar_and_nucleotide_sugar_metabolism


id: CL:4021
description: Mixed, incl. Pentose phosphate pathway, and Amino sugar and nucleotide sugar metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4021_Mixed,_incl._Pentose_phosphate_pathway,_and_Amino_sugar_and_nucleotide_sugar_metabolism


id: CL:4022
description: Mixed, incl. Pentose phosphate pathway, and Amino sugar and nucleotide sugar metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4022_Mixed,_incl._Pentose_phosphate_pathway,_and_Amino_sugar_and_nucleotide_sugar_metabolism


id: CL:4023
description: Pentose phosphate pathway, and Glycolysis / Gluconeogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4023_Pentose_phosphate_pathway,_and_Glycolysis_/_Gluconeogenesis


id: CL:4024
description: Pentose phosphate pathway, and Glycolysis / Gluconeogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4024_Pentose_phosphate_pathway,_and_Glycolysis_/_Gluconeogenesis


id: CL:4027
description: Pentose phosphate pathway, and ROK family
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4027_Pentose_phosphate_pathway,_and_ROK_family


id: CL:4028
description: Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4028_Pentose_phosphate_pathway,_and_Glycolysis


id: CL:4029
description: Carbon fixation in photosynthetic organisms, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4029_Carbon_fixation_in_photosynthetic_organisms,_and_Glycolysis


id: CL:4031
description: Glycolysis, and Glyceraldehyde-3-phosphate dehydrogenase, type I
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4031_Glycolysis,_and_Glyceraldehyde-3-phosphate_dehydrogenase,_type_I


id: CL:4064
description: Ribulose-phosphate 3-epimerase, and Transketolase, thiamine diphosphate binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4064_Ribulose-phosphate_3-epimerase,_and_Transketolase,_thiamine_diphosphate_binding_domain


id: CL:4081
description: D-gluconate metabolic process, and Glucose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4081_D-gluconate_metabolic_process,_and_Glucose_metabolism


id: CL:4097
description: Mixed, incl. ROK family, and Xylose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4097_Mixed,_incl._ROK_family,_and_Xylose_metabolism


id: CL:412
description: Mixed, incl. Dihydroorotate dehydrogenase, and Transcription regulator Rrf2-type, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:412_Mixed,_incl._Dihydroorotate_dehydrogenase,_and_Transcription_regulator_Rrf2-type,_conserved_site


id: CL:4128
description: Mixed, incl. Phosphoenolpyruvate synthase, and PEP-utilising enzyme, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4128_Mixed,_incl._Phosphoenolpyruvate_synthase,_and_PEP-utilising_enzyme,_C-terminal


id: CL:4141
description: Mixed, incl. Cation efflux family, and Alpha-D-phosphohexomutase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4141_Mixed,_incl._Cation_efflux_family,_and_Alpha-D-phosphohexomutase_superfamily


id: CL:4156
description: Mixed, incl. SIS domain, and Glycoside hydrolase, family 3, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4156_Mixed,_incl._SIS_domain,_and_Glycoside_hydrolase,_family_3,_N-terminal


id: CL:4158
description: Amino sugar metabolic process, and GlmS/FrlB, SIS domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4158_Amino_sugar_metabolic_process,_and_GlmS/FrlB,_SIS_domain_2


id: CL:4174
description: Glycoside hydrolase, family 3, N-terminal, and UbiC transcription regulator-associated
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4174_Glycoside_hydrolase,_family_3,_N-terminal,_and_UbiC_transcription_regulator-associated


id: CL:4186
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4186_Mixed,_incl._Ribonuclease_H_domain,_and_Nitrogen_regulatory_protein_PII/ATP_phosphoribosyltransferase,_C-terminal

description:
  Mixed, incl. Ribonuclease H domain, and Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal


id: CL:4204
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4204_Mixed,_incl._N6-(Delta2-isopentenyl)-adenosine_5-monophosphate_phosphoribohydrolase_activity,_and_Periplasmic_binding_protein-like_domain

description:
  Mixed, incl. N6-(Delta2-isopentenyl)-adenosine 5-monophosphate phosphoribohydrolase activity, and Periplasmic binding protein-like domain


id: CL:4215
description: Mixed, incl. Carbohydrate transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4215_Mixed,_incl._Carbohydrate_transport,_and_ABC_transporter,_permease


id: CL:4216
description: Carbohydrate transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4216_Carbohydrate_transport,_and_ABC_transporter,_permease


id: CL:4218
description: Carbohydrate transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4218_Carbohydrate_transport,_and_ABC_transporter,_permease


id: CL:4219
description: Carbohydrate transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4219_Carbohydrate_transport,_and_ABC_transporter,_permease


id: CL:4221
description: D-ribose transmembrane transport, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4221_D-ribose_transmembrane_transport,_and_Periplasmic_binding_protein


id: CL:4246
description: Mixed, incl. Creatinase, N-terminal, and D-ribose transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4246_Mixed,_incl._Creatinase,_N-terminal,_and_D-ribose_transmembrane_transport


id: CL:4261
description: Mixed, incl. ABC transporter substrate-binding protein PnrA-like, and Sugar transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4261_Mixed,_incl._ABC_transporter_substrate-binding_protein_PnrA-like,_and_Sugar_transport


id: CL:4283
description: Mixed, incl. Inositol phosphate metabolism, and Methylmalonate-semialdehyde dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4283_Mixed,_incl._Inositol_phosphate_metabolism,_and_Methylmalonate-semialdehyde_dehydrogenase


id: CL:4286
description: Inositol phosphate metabolism, and Fructose-bisphosphate aldolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4286_Inositol_phosphate_metabolism,_and_Fructose-bisphosphate_aldolase_activity


id: CL:4308
description: Mixed, incl. Rieske iron-sulphur protein, C-terminal, and Ectoine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4308_Mixed,_incl._Rieske_iron-sulphur_protein,_C-terminal,_and_Ectoine_catabolic_process


id: CL:4319
description: Mixed, incl. Bacterial microcompartment, and Carbonate dehydratase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4319_Mixed,_incl._Bacterial_microcompartment,_and_Carbonate_dehydratase_activity


id: CL:4320
description: Mixed, incl. Carbonate dehydratase activity, and Photosynthesis, dark reaction
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4320_Mixed,_incl._Carbonate_dehydratase_activity,_and_Photosynthesis,_dark_reaction


id: CL:4321
description: Mixed, incl. Carbonate dehydratase activity, and Photosynthesis, dark reaction
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4321_Mixed,_incl._Carbonate_dehydratase_activity,_and_Photosynthesis,_dark_reaction


id: CL:4323
description: Photosynthesis, dark reaction, and Phosphoribulokinase/uridine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4323_Photosynthesis,_dark_reaction,_and_Phosphoribulokinase/uridine_kinase


id: CL:433
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:433_Mixed,_incl._2-amino-3-carboxymuconate-6-semialdehyde_decarboxylase,_and_Rubredoxin-like_zinc_ribbon_domain_(DUF35_N)

description:
  Mixed, incl. 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase, and Rubredoxin-like zinc ribbon domain (DUF35_N)


id: CL:4344
description: Mixed, incl. Biosynthesis of various secondary metabolites - part 3, and RNA 3-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4344_Mixed,_incl._Biosynthesis_of_various_secondary_metabolites_-_part_3,_and_RNA_3-end_processing


id: CL:4358
description: CcmK-like superfamily, and Primary amino compound metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4358_CcmK-like_superfamily,_and_Primary_amino_compound_metabolic_process


id: CL:4371
description: Mostly uncharacterized, incl. Styrene degradation, and Nicotinate and nicotinamide metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4371_Mostly_uncharacterized,_incl._Styrene_degradation,_and_Nicotinate_and_nicotinamide_metabolism


id: CL:4372
description: Mixed, incl. Amidase, and Styrene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4372_Mixed,_incl._Amidase,_and_Styrene_degradation


id: CL:4374
description: Mixed, incl. Oxoprolinase family, and Nicotinate and nicotinamide metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4374_Mixed,_incl._Oxoprolinase_family,_and_Nicotinate_and_nicotinamide_metabolism


id: CL:4375
description: Mixed, incl. Oxoprolinase family, and Nitrogen utilization
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4375_Mixed,_incl._Oxoprolinase_family,_and_Nitrogen_utilization


id: CL:4377
description: Mixed, incl. Oxoprolinase family, and Nitrogen utilization
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4377_Mixed,_incl._Oxoprolinase_family,_and_Nitrogen_utilization


id: CL:4378
description: Mixed, incl. Nitrogen utilization, and Maleate isomerase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4378_Mixed,_incl._Nitrogen_utilization,_and_Maleate_isomerase_activity


id: CL:4380
description: Maleate isomerase activity, and Nitrogen utilization
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4380_Maleate_isomerase_activity,_and_Nitrogen_utilization


id: CL:4426
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4426_Mixed,_incl._Ectoine_metabolic_process,_and_Peptidase_M24B,_X-Pro_dipeptidase/aminopeptidase_P,_conserved_site

description:
  Mixed, incl. Ectoine metabolic process, and Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site


id: CL:4427
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4427_Mixed,_incl._Ectoine_metabolic_process,_and_Peptidase_M24B,_X-Pro_dipeptidase/aminopeptidase_P,_conserved_site

description:
  Mixed, incl. Ectoine metabolic process, and Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site


id: CL:4429
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4429_Ectoine_biosynthetic_process,_and_Peptidase_M24B,_X-Pro_dipeptidase/aminopeptidase_P,_conserved_site

description:
  Ectoine biosynthetic process, and Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site


id: CL:4440
description: Maleate isomerase activity, and Cyclophilin-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4440_Maleate_isomerase_activity,_and_Cyclophilin-like_domain_superfamily


id: CL:4450
description: Mixed, incl. Peptidase M48, and Glycerolipid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4450_Mixed,_incl._Peptidase_M48,_and_Glycerolipid_catabolic_process


id: CL:4468
description: Amidase, and Nitrile metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4468_Amidase,_and_Nitrile_metabolic_process


id: CL:4470
description: Amidase, and Nitrile metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4470_Amidase,_and_Nitrile_metabolic_process


id: CL:4472
description: Amidase, and asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4472_Amidase,_and_asparaginyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: CL:4474
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, and Amidase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4474_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity,_and_Amidase,_conserved_site


id: CL:4484
description: Amidase, conserved site, and Acylphosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4484_Amidase,_conserved_site,_and_Acylphosphatase


id: CL:4494
description: Nitrile metabolic process, and Nitrile hydratase accessory protein, putative
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4494_Nitrile_metabolic_process,_and_Nitrile_hydratase_accessory_protein,_putative


id: CL:450
description: Mixed, incl. Poly-hydroxybutyrate metabolic process, and N-terminal half of MaoC dehydratase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:450_Mixed,_incl._Poly-hydroxybutyrate_metabolic_process,_and_N-terminal_half_of_MaoC_dehydratase


id: CL:452
description: Mixed, incl. X-Pro dipeptidyl-peptidase (S15 family), and N-terminal of MaoC-like dehydratase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:452_Mixed,_incl._X-Pro_dipeptidyl-peptidase_(S15_family),_and_N-terminal_of_MaoC-like_dehydratase


id: CL:4521
description: Mixed, incl. Tyrosine metabolic process, and FAD dependent oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4521_Mixed,_incl._Tyrosine_metabolic_process,_and_FAD_dependent_oxidoreductase


id: CL:4533
description: Mixed, incl. DNA binding HTH domain, Fis-type, and Toluene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4533_Mixed,_incl._DNA_binding_HTH_domain,_Fis-type,_and_Toluene_degradation


id: CL:4534
description: Mixed, incl. DNA binding HTH domain, Fis-type, and Methane/Phenol/Toluene Hydroxylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4534_Mixed,_incl._DNA_binding_HTH_domain,_Fis-type,_and_Methane/Phenol/Toluene_Hydroxylase


id: CL:4536
description: Mixed, incl. Methane/Phenol/Toluene Hydroxylase, and DNA binding HTH domain, Fis-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4536_Mixed,_incl._Methane/Phenol/Toluene_Hydroxylase,_and_DNA_binding_HTH_domain,_Fis-type


id: CL:4538
description: Mixed, incl. Methane/Phenol/Toluene Hydroxylase, and DNA binding HTH domain, Fis-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4538_Mixed,_incl._Methane/Phenol/Toluene_Hydroxylase,_and_DNA_binding_HTH_domain,_Fis-type


id: CL:4540
description: Mixed, incl. Methane/Phenol/Toluene Hydroxylase, and DNA binding HTH domain, Fis-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4540_Mixed,_incl._Methane/Phenol/Toluene_Hydroxylase,_and_DNA_binding_HTH_domain,_Fis-type


id: CL:4544
description: Methane/Phenol/Toluene Hydroxylase, and MmoB/DmpM family
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4544_Methane/Phenol/Toluene_Hydroxylase,_and_MmoB/DmpM_family


id: CL:4586
description: Mixed, incl. GAF domain, and Acetamidase/Formamidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4586_Mixed,_incl._GAF_domain,_and_Acetamidase/Formamidase


id: CL:4587
description: Mixed, incl. GAF domain, and Nitrogen utilization
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4587_Mixed,_incl._GAF_domain,_and_Nitrogen_utilization


id: CL:4596
description: Mixed, incl. Acetamidase/Formamidase, and GAF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4596_Mixed,_incl._Acetamidase/Formamidase,_and_GAF_domain


id: CL:4606
description: Mixed, incl. Nucleobase transport, and Adenosine to inosine editing
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4606_Mixed,_incl._Nucleobase_transport,_and_Adenosine_to_inosine_editing


id: CL:4622
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4622_Mixed,_incl._Aromatic_amino_acid_beta-eliminating_lyase/threonine_aldolase,_and_Sodium/solute_symporter

description:
  Mixed, incl. Aromatic amino acid beta-eliminating lyase/threonine aldolase, and Sodium/solute symporter


id: CL:4623
description: Mixed, incl. Sodium/solute symporter, and Monocarboxylic acid transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4623_Mixed,_incl._Sodium/solute_symporter,_and_Monocarboxylic_acid_transmembrane_transporter_activity


id: CL:4625
description: Mixed, incl. Monocarboxylic acid transmembrane transporter activity, and Sodium/solute symporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4625_Mixed,_incl._Monocarboxylic_acid_transmembrane_transporter_activity,_and_Sodium/solute_symporter


id: CL:4643
description: Mixed, incl. Aromatic amino acid beta-eliminating lyase/threonine aldolase, and NlpC/P60 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4643_Mixed,_incl._Aromatic_amino_acid_beta-eliminating_lyase/threonine_aldolase,_and_NlpC/P60_family


id: CL:4659
description: Mixed, incl. CoA-transferase family III domain 1 superfamily, and Citrate lyase beta subunit-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4659_Mixed,_incl._CoA-transferase_family_III_domain_1_superfamily,_and_Citrate_lyase_beta_subunit-like


id: CL:4660
description: Mixed, incl. CoA-transferase family III domain 1 superfamily, and Citrate lyase beta subunit-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4660_Mixed,_incl._CoA-transferase_family_III_domain_1_superfamily,_and_Citrate_lyase_beta_subunit-like


id: CL:4662
description: CoA-transferase family III domain 1 superfamily, and Citrate lyase beta subunit-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4662_CoA-transferase_family_III_domain_1_superfamily,_and_Citrate_lyase_beta_subunit-like


id: CL:4664
description: Citrate lyase beta subunit-like, and CoA-transferase family III domain 1 superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4664_Citrate_lyase_beta_subunit-like,_and_CoA-transferase_family_III_domain_1_superfamily


id: CL:4666
description: Mixed, incl. Oxaloacetate metabolic process, and Carbon fixation
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4666_Mixed,_incl._Oxaloacetate_metabolic_process,_and_Carbon_fixation


id: CL:4680
description: CoA-transferase family III domain 1 superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4680_CoA-transferase_family_III_domain_1_superfamily


id: CL:4704
description: Mixed, incl. Class II aldolase/adducin N-terminal, and Vancomycin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4704_Mixed,_incl._Class_II_aldolase/adducin_N-terminal,_and_Vancomycin_metabolic_process


id: CL:4705
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4705_Mostly_uncharacterized,_incl._Ring_hydroxylating_beta_subunit,_and_Aromatic-ring-hydroxylating_dioxygenase,_2Fe-2S-binding_site

description:
  Mostly uncharacterized, incl. Ring hydroxylating beta subunit, and Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site


id: CL:4706
description: Mixed, incl. RmlD substrate binding domain, and AMP-dependent ligase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4706_Mixed,_incl._RmlD_substrate_binding_domain,_and_AMP-dependent_ligase,_C-terminal


id: CL:4719
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4719_Mixed,_incl._Ring_hydroxylating_beta_subunit,_and_Aromatic-ring-hydroxylating_dioxygenase,_2Fe-2S-binding_site

description:
  Mixed, incl. Ring hydroxylating beta subunit, and Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site


id: CL:4729
description: Class II aldolase/adducin N-terminal, and Cytoplasmic vesicle
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4729_Class_II_aldolase/adducin_N-terminal,_and_Cytoplasmic_vesicle


id: CL:4745
description: Mixed, incl. Domain of unknown function DUF418, and Siderophore transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4745_Mixed,_incl._Domain_of_unknown_function_DUF418,_and_Siderophore_transport


id: CL:4757
description: Mixed, incl. Carbohydrate metabolic process, and Hexosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4757_Mixed,_incl._Carbohydrate_metabolic_process,_and_Hexosyltransferase_activity


id: CL:4758
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4758_Mixed,_incl._Carbohydrate_metabolic_process,_and_Glycosyltransferase_subfamily_4-like,_N-terminal_domain

description:
  Mixed, incl. Carbohydrate metabolic process, and Glycosyltransferase subfamily 4-like, N-terminal domain


id: CL:4759
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4759_Mixed,_incl._Carbohydrate_metabolic_process,_and_Glycosyltransferase_subfamily_4-like,_N-terminal_domain

description:
  Mixed, incl. Carbohydrate metabolic process, and Glycosyltransferase subfamily 4-like, N-terminal domain


id: CL:476
description: Mixed, incl. MftR, C-terminal, and Alpha/beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:476_Mixed,_incl._MftR,_C-terminal,_and_Alpha/beta_hydrolase_fold


id: CL:4760
description: Mixed, incl. Polysaccharide metabolic process, and Hexosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4760_Mixed,_incl._Polysaccharide_metabolic_process,_and_Hexosyltransferase_activity


id: CL:4761
description: Mixed, incl. Polysaccharide metabolic process, and Hexosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4761_Mixed,_incl._Polysaccharide_metabolic_process,_and_Hexosyltransferase_activity


id: CL:4762
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4762_Mixed,_incl._Polysaccharide_metabolic_process,_and_Glycosyltransferase_subfamily_4-like,_N-terminal_domain

description:
  Mixed, incl. Polysaccharide metabolic process, and Glycosyltransferase subfamily 4-like, N-terminal domain


id: CL:4764
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4764_Mixed,_incl._Polysaccharide_metabolic_process,_and_Glycosyltransferase_subfamily_4-like,_N-terminal_domain

description:
  Mixed, incl. Polysaccharide metabolic process, and Glycosyltransferase subfamily 4-like, N-terminal domain


id: CL:4765
description: Mixed, incl. Polysaccharide biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4765_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:4766
description: Mixed, incl. Polysaccharide biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4766_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:4767
description: Mixed, incl. Polysaccharide biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4767_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:4768
description: Polysaccharide biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4768_Polysaccharide_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:4770
description: Polysaccharide biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4770_Polysaccharide_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:4772
description: Polysaccharide biosynthetic process, and NAD dependent epimerase/dehydratase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4772_Polysaccharide_biosynthetic_process,_and_NAD_dependent_epimerase/dehydratase_family


id: CL:4774
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Bacterial sugar transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4774_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Bacterial_sugar_transferase


id: CL:4777
description: Bacterial sugar transferase, and Protein tyrosine kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4777_Bacterial_sugar_transferase,_and_Protein_tyrosine_kinase_activity


id: CL:4779
description: Protein tyrosine kinase activity, and CoA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4779_Protein_tyrosine_kinase_activity,_and_CoA-binding_domain


id: CL:478
description: Mixed, incl. Alpha/beta hydrolase fold, and FAD binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:478_Mixed,_incl._Alpha/beta_hydrolase_fold,_and_FAD_binding_domain


id: CL:4803
description: Nucleotide-sugar metabolic process, and Nucleotidyl transferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4803_Nucleotide-sugar_metabolic_process,_and_Nucleotidyl_transferase_domain


id: CL:4805
description: Polyketide sugar unit biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4805_Polyketide_sugar_unit_biosynthesis


id: CL:4830
description: Mixed, incl. Galactofuranosyltransferase-2, C-terminal, and ABC-2 type transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4830_Mixed,_incl._Galactofuranosyltransferase-2,_C-terminal,_and_ABC-2_type_transporter


id: CL:4849
description: DegT/DnrJ/EryC1/StrS aminotransferase, and UDP-glucose 4-epimerase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4849_DegT/DnrJ/EryC1/StrS_aminotransferase,_and_UDP-glucose_4-epimerase_activity


id: CL:4872
description: Glycosyltransferase Family 4, and Glycosyl transferase 4-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4872_Glycosyltransferase_Family_4,_and_Glycosyl_transferase_4-like


id: CL:4884
description: Galactose metabolic process, and Beta-galactosidase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4884_Galactose_metabolic_process,_and_Beta-galactosidase_complex


id: CL:4893
description: Mixed, incl. C-methyltransferase, and Asparagine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4893_Mixed,_incl._C-methyltransferase,_and_Asparagine_biosynthesis


id: CL:4895
description: Mixed, incl. Asparagine biosynthesis, and Glycosyl transferase 4-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4895_Mixed,_incl._Asparagine_biosynthesis,_and_Glycosyl_transferase_4-like_domain


id: CL:4920
description: Starch and sucrose metabolism, and Glycosyl transferase, family 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4920_Starch_and_sucrose_metabolism,_and_Glycosyl_transferase,_family_1


id: CL:4921
description: Mixed, incl. Glycosyl hydrolase, family 13, catalytic domain, and Trehalose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4921_Mixed,_incl._Glycosyl_hydrolase,_family_13,_catalytic_domain,_and_Trehalose_metabolic_process


id: CL:4924
description: Glycosyl hydrolase, family 13, catalytic domain, and Trehalose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4924_Glycosyl_hydrolase,_family_13,_catalytic_domain,_and_Trehalose_metabolic_process


id: CL:4925
description: Alpha amylase, catalytic domain, and Trehalose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4925_Alpha_amylase,_catalytic_domain,_and_Trehalose_metabolic_process


id: CL:4927
description: Trehalose metabolic process, and Glycosyl hydrolase, all-beta
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4927_Trehalose_metabolic_process,_and_Glycosyl_hydrolase,_all-beta


id: CL:4946
description: Nucleotidyl transferase domain, and 1,4-alpha-oligoglucan phosphorylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4946_Nucleotidyl_transferase_domain,_and_1,4-alpha-oligoglucan_phosphorylase_activity


id: CL:495
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:495_Mixed,_incl._N-terminal_half_of_MaoC_dehydratase,_and_Tetracycline_resistance_protein_TetA/multidrug_resistance_protein_MdtG

description:
  Mixed, incl. N-terminal half of MaoC dehydratase, and Tetracycline resistance protein TetA/multidrug resistance protein MdtG


id: CL:4959
description: Alpha-amylase domain, and Amino acid permease/ SLC12A domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4959_Alpha-amylase_domain,_and_Amino_acid_permease/_SLC12A_domain


id: CL:4970
description: Mixed, incl. Glycosyl transferase 4-like, and Protein of unknown function DUF998
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4970_Mixed,_incl._Glycosyl_transferase_4-like,_and_Protein_of_unknown_function_DUF998


id: CL:4991
description: Mixed, incl. F420H(2)-dependent quinone reductase, and Domain of unknown function DUF4440
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4991_Mixed,_incl._F420H(2)-dependent_quinone_reductase,_and_Domain_of_unknown_function_DUF4440


id: CL:4993
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:4993_Mixed,_incl._Ubiquitin-like_protein_transferase_activity,_and_Scavenger_mRNA_decapping_enzyme_C-term_binding

description:
  Mixed, incl. Ubiquitin-like protein transferase activity, and Scavenger mRNA decapping enzyme C-term binding


id: CL:5014
description: Mostly uncharacterized, incl. Metallo-dependent phosphatase-like, and Outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5014_Mostly_uncharacterized,_incl._Metallo-dependent_phosphatase-like,_and_Outer_membrane


id: CL:5016
description: Mostly uncharacterized, incl. Alkaline phosphatase activity, and Aminoacyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5016_Mostly_uncharacterized,_incl._Alkaline_phosphatase_activity,_and_Aminoacyltransferase_activity


id: CL:5020
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5020_Mixed,_incl._Alkaline-phosphatase-like,_core_domain_superfamily,_and_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity

description:
  Mixed, incl. Alkaline-phosphatase-like, core domain superfamily, and CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity


id: CL:5048
description: Mixed, incl. Mannosidase activity, and Galactose mutarotase-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5048_Mixed,_incl._Mannosidase_activity,_and_Galactose_mutarotase-like_domain_superfamily


id: CL:5050
description: Mannosidase activity, and NTF2-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5050_Mannosidase_activity,_and_NTF2-like_domain_superfamily


id: CL:5072
description: Response to virus, and Amidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5072_Response_to_virus,_and_Amidase_activity


id: CL:5092
description: Mixed, incl. Host cell surface binding, and Glycosyltransferase 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5092_Mixed,_incl._Host_cell_surface_binding,_and_Glycosyltransferase_2-like


id: CL:5101
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5101_Mixed,_incl._Mannose_type_O-glycan_biosynthesis,_and_Alkaline-phosphatase-like,_core_domain_superfamily

description:
  Mixed, incl. Mannose type O-glycan biosynthesis, and Alkaline-phosphatase-like, core domain superfamily


id: CL:5110
description: Mixed, incl. Polysaccharide degradation, and SGNH hydrolase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5110_Mixed,_incl._Polysaccharide_degradation,_and_SGNH_hydrolase_superfamily


id: CL:5112
description: Mixed, incl. Polysaccharide degradation, and SGNH hydrolase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5112_Mixed,_incl._Polysaccharide_degradation,_and_SGNH_hydrolase_superfamily


id: CL:5114
description: Mixed, incl. Polysaccharide degradation, and SGNH hydrolase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5114_Mixed,_incl._Polysaccharide_degradation,_and_SGNH_hydrolase_superfamily


id: CL:5115
description: Mixed, incl. Polysaccharide degradation, and SGNH hydrolase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5115_Mixed,_incl._Polysaccharide_degradation,_and_SGNH_hydrolase_superfamily


id: CL:5117
description: SGNH hydrolase superfamily, and Polysaccharide degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5117_SGNH_hydrolase_superfamily,_and_Polysaccharide_degradation


id: CL:5120
description: Antitoxin Rv0909/MT0933, and Glycosyl hydrolase family 12
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5120_Antitoxin_Rv0909/MT0933,_and_Glycosyl_hydrolase_family_12


id: CL:5135
description: Cellulose degradation, and Cell killing
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5135_Cellulose_degradation,_and_Cell_killing


id: CL:5149
description: Mixed, incl. NodB homology domain, and Polysaccharide degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5149_Mixed,_incl._NodB_homology_domain,_and_Polysaccharide_degradation


id: CL:515
description: Mixed, incl. Flavin reductase like domain, and Enoyl-CoA hydratase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:515_Mixed,_incl._Flavin_reductase_like_domain,_and_Enoyl-CoA_hydratase,_C-terminal


id: CL:5160
description: Mixed, incl. Pectin lyase fold, and Cellulose biosynthesis protein BcsQ
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5160_Mixed,_incl._Pectin_lyase_fold,_and_Cellulose_biosynthesis_protein_BcsQ


id: CL:5191
description: Molecular transducer activity, and Ferric iron reductase FhuF-like transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5191_Molecular_transducer_activity,_and_Ferric_iron_reductase_FhuF-like_transporter


id: CL:5203
description: Mixed, incl. Ferric reductase like transmembrane component, and Geranylgeranyl reductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5203_Mixed,_incl._Ferric_reductase_like_transmembrane_component,_and_Geranylgeranyl_reductase_family


id: CL:5204
description: Mixed, incl. Ferric reductase like transmembrane component, and Cold-shock protein, DNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5204_Mixed,_incl._Ferric_reductase_like_transmembrane_component,_and_Cold-shock_protein,_DNA-binding


id: CL:5215
description: Mixed, incl. Geranylgeranyl reductase family, and Ferric reductase like transmembrane component
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5215_Mixed,_incl._Geranylgeranyl_reductase_family,_and_Ferric_reductase_like_transmembrane_component


id: CL:524
description: Mixed, incl. Peptidase S1C, and HotDog domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:524_Mixed,_incl._Peptidase_S1C,_and_HotDog_domain_superfamily


id: CL:5242
description: Mixed, incl. Transmembrane, and Response to abiotic stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5242_Mixed,_incl._Transmembrane,_and_Response_to_abiotic_stimulus


id: CL:5243
description: Mixed, incl. Transmembrane, and Response to abiotic stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5243_Mixed,_incl._Transmembrane,_and_Response_to_abiotic_stimulus


id: CL:5245
description: Mixed, incl. Transmembrane, and Response to abiotic stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5245_Mixed,_incl._Transmembrane,_and_Response_to_abiotic_stimulus


id: CL:5246
description: Mixed, incl. Transmembrane, and Response to abiotic stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5246_Mixed,_incl._Transmembrane,_and_Response_to_abiotic_stimulus


id: CL:5247
description: Mixed, incl. Transmembrane, and Response to abiotic stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5247_Mixed,_incl._Transmembrane,_and_Response_to_abiotic_stimulus


id: CL:5248
description: Mixed, incl. Transmembrane, and Response to abiotic stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5248_Mixed,_incl._Transmembrane,_and_Response_to_abiotic_stimulus


id: CL:5249
description: Mixed, incl. Transmembrane, and Response to abiotic stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5249_Mixed,_incl._Transmembrane,_and_Response_to_abiotic_stimulus


id: CL:525
description: Mixed, incl. Peptidase S1C, and N-terminal half of MaoC dehydratase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:525_Mixed,_incl._Peptidase_S1C,_and_N-terminal_half_of_MaoC_dehydratase


id: CL:5251
description: Mixed, incl. Transmembrane, and Response to abiotic stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5251_Mixed,_incl._Transmembrane,_and_Response_to_abiotic_stimulus


id: CL:5252
description: Mixed, incl. Transmembrane, and Response to abiotic stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5252_Mixed,_incl._Transmembrane,_and_Response_to_abiotic_stimulus


id: CL:5253
description: Mixed, incl. Transmembrane, and Response to abiotic stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5253_Mixed,_incl._Transmembrane,_and_Response_to_abiotic_stimulus


id: CL:5254
description: Mixed, incl. Sigma factor activity, and Transmembrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5254_Mixed,_incl._Sigma_factor_activity,_and_Transmembrane


id: CL:5256
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5256_Mostly_uncharacterized,_incl._Modulation_by_symbiont_of_host_immune_response,_and_Sigma_factor_activity

description:
  Mostly uncharacterized, incl. Modulation by symbiont of host immune response, and Sigma factor activity


id: CL:5258
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5258_Mostly_uncharacterized,_incl._Modulation_by_symbiont_of_host_immune_response,_and_Sigma_factor_activity

description:
  Mostly uncharacterized, incl. Modulation by symbiont of host immune response, and Sigma factor activity


id: CL:5260
description: Mixed, incl. Sigma factor activity, and Transmembrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5260_Mixed,_incl._Sigma_factor_activity,_and_Transmembrane


id: CL:5262
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5262_Mostly_uncharacterized,_incl._Modulation_by_symbiont_of_host_immune_response,_and_WD40/YVTN_repeat-like-containing_domain_superfamily

description:
  Mostly uncharacterized, incl. Modulation by symbiont of host immune response, and WD40/YVTN repeat-like-containing domain superfamily


id: CL:5263
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5263_Mostly_uncharacterized,_incl._Modulation_by_symbiont_of_host_immune_response,_and_RNA_polymerase_sigma-70_like

description:
  Mostly uncharacterized, incl. Modulation by symbiont of host immune response, and RNA polymerase sigma-70 like


id: CL:5265
description: Mostly uncharacterized, incl. Modulation by symbiont of host immune response, and Membrane assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5265_Mostly_uncharacterized,_incl._Modulation_by_symbiont_of_host_immune_response,_and_Membrane_assembly


id: CL:5267
description: Mostly uncharacterized, incl. Membrane assembly, and FomD-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5267_Mostly_uncharacterized,_incl._Membrane_assembly,_and_FomD-like_superfamily


id: CL:527
description: Peptidase S1C, and N-terminal half of MaoC dehydratase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:527_Peptidase_S1C,_and_N-terminal_half_of_MaoC_dehydratase


id: CL:5271
description: Mostly uncharacterized, incl. Membrane assembly, and FomD-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5271_Mostly_uncharacterized,_incl._Membrane_assembly,_and_FomD-like_superfamily


id: CL:5273
description: Mostly uncharacterized, incl. Membrane assembly, and FomD-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5273_Mostly_uncharacterized,_incl._Membrane_assembly,_and_FomD-like_superfamily


id: CL:5276
description: Mixed, incl. Membrane assembly, and Homoserine kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5276_Mixed,_incl._Membrane_assembly,_and_Homoserine_kinase_activity


id: CL:529
description: N-terminal half of MaoC dehydratase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:529_N-terminal_half_of_MaoC_dehydratase


id: CL:5328
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5328_Mixed,_incl._Quinoprotein_amine_dehydrogenase,_beta_chain-like,_and_Histidine_kinase/HSP90-like_ATPase_superfamily

description:
  Mixed, incl. Quinoprotein amine dehydrogenase, beta chain-like, and Histidine kinase/HSP90-like ATPase superfamily


id: CL:5342
description: Mostly uncharacterized, incl. AAA-like domain, and Protein of unknown function DUF5313
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5342_Mostly_uncharacterized,_incl._AAA-like_domain,_and_Protein_of_unknown_function_DUF5313


id: CL:5343
description: Mostly uncharacterized, incl. AAA-like domain, and Protein of unknown function DUF5313
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5343_Mostly_uncharacterized,_incl._AAA-like_domain,_and_Protein_of_unknown_function_DUF5313


id: CL:5346
description: Mostly uncharacterized, incl. AAA-like domain, and Protein of unknown function DUF5313
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5346_Mostly_uncharacterized,_incl._AAA-like_domain,_and_Protein_of_unknown_function_DUF5313


id: CL:5347
description: Mostly uncharacterized, incl. AAA-like domain, and Ribbon-helix-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5347_Mostly_uncharacterized,_incl._AAA-like_domain,_and_Ribbon-helix-helix


id: CL:5350
description: Mixed, incl. AAA-like domain, and Ribbon-helix-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5350_Mixed,_incl._AAA-like_domain,_and_Ribbon-helix-helix


id: CL:5352
description: Mixed, incl. AAA-like domain, and Sister chromatid cohesion
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5352_Mixed,_incl._AAA-like_domain,_and_Sister_chromatid_cohesion


id: CL:5368
description: Mixed, incl. AAA-like domain, and RNA degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5368_Mixed,_incl._AAA-like_domain,_and_RNA_degradation


id: CL:5386
description: Protein of unknown function DUF5313, and Ada-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5386_Protein_of_unknown_function_DUF5313,_and_Ada-like_domain_superfamily


id: CL:5402
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5402_Mixed,_incl._Gamma-glutamyl_cyclotransferase,_AIG2-like,_and_Uncharacterised_conserved_protein_UCP010361,_membrane

description:
  Mixed, incl. Gamma-glutamyl cyclotransferase, AIG2-like, and Uncharacterised conserved protein UCP010361, membrane


id: CL:543
description: Mixed, incl. Peptidase S1C, and Endonuclease III
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:543_Mixed,_incl._Peptidase_S1C,_and_Endonuclease_III


id: CL:5441
description: Lipid-linked peptidoglycan transporter activity, and NUDIX hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5441_Lipid-linked_peptidoglycan_transporter_activity,_and_NUDIX_hydrolase


id: CL:5454
description: Mixed, incl. Zincin-like metallopeptidase, and Spermidine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5454_Mixed,_incl._Zincin-like_metallopeptidase,_and_Spermidine_metabolic_process


id: CL:5468
description: Mixed, incl. Methyltransferase type 11, and Alpha-glucan metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5468_Mixed,_incl._Methyltransferase_type_11,_and_Alpha-glucan_metabolic_process


id: CL:5470
description: Alpha-glucan metabolic process, and Methyltransferase type 11
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5470_Alpha-glucan_metabolic_process,_and_Methyltransferase_type_11


id: CL:5492
description: Mixed, incl. Glycosyl hydrolase family 12, and NlpC/P60 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5492_Mixed,_incl._Glycosyl_hydrolase_family_12,_and_NlpC/P60_family


id: CL:5511
description: Biosynthesis of type II polyketide backbone, and Arsenical pump ATPase, ArsA/GET3
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5511_Biosynthesis_of_type_II_polyketide_backbone,_and_Arsenical_pump_ATPase,_ArsA/GET3


id: CL:5525
description: Mixed, incl. Fluoride transmembrane transport, and Regulation of transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5525_Mixed,_incl._Fluoride_transmembrane_transport,_and_Regulation_of_transport


id: CL:5537
description: Mixed, incl. ESAT-6-like superfamily, and FtsK domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5537_Mixed,_incl._ESAT-6-like_superfamily,_and_FtsK_domain


id: CL:5540
description: Mixed, incl. ESAT-6-like superfamily, and FtsK domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5540_Mixed,_incl._ESAT-6-like_superfamily,_and_FtsK_domain


id: CL:556
description: Mixed, incl. EthD domain, and Xenobiotic catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:556_Mixed,_incl._EthD_domain,_and_Xenobiotic_catabolic_process


id: CL:5560
description: Mixed, incl. Protein of unknown function DUF1707, and PspC domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5560_Mixed,_incl._Protein_of_unknown_function_DUF1707,_and_PspC_domain


id: CL:5561
description: Protein of unknown function DUF1707, and PspC domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5561_Protein_of_unknown_function_DUF1707,_and_PspC_domain


id: CL:5562
description: PspC domain, and Protein of unknown function DUF1707
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5562_PspC_domain,_and_Protein_of_unknown_function_DUF1707


id: CL:5564
description: PspC domain, and Identical protein binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5564_PspC_domain,_and_Identical_protein_binding


id: CL:5581
description: Mixed, incl. Protein of unknown function DUF1707
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5581_Mixed,_incl._Protein_of_unknown_function_DUF1707


id: CL:5590
description: Mixed, incl. Coenzyme A pyrophosphatase, and Guanosine tetraphosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5590_Mixed,_incl._Coenzyme_A_pyrophosphatase,_and_Guanosine_tetraphosphate_metabolic_process


id: CL:5599
description: Mixed, incl. Domain of unknown function DUF4162, and Type II CAAX prenyl endopeptidase Rce1-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5599_Mixed,_incl._Domain_of_unknown_function_DUF4162,_and_Type_II_CAAX_prenyl_endopeptidase_Rce1-like


id: CL:5615
description: Mixed, incl. Structural constituent of chromatin, and DNA glycosylase AlkZ-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5615_Mixed,_incl._Structural_constituent_of_chromatin,_and_DNA_glycosylase_AlkZ-like


id: CL:5630
description: Mixed, incl. Peptidyl-lysine acetylation, and Lipoprotein localisation LolA/LolB/LppX
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5630_Mixed,_incl._Peptidyl-lysine_acetylation,_and_Lipoprotein_localisation_LolA/LolB/LppX


id: CL:5640
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5640_Mixed,_incl._Putative_neutral_zinc_metallopeptidase,_and_Ribonucleoside-diphosphate_reductase_activity

description:
  Mixed, incl. Putative neutral zinc metallopeptidase, and Ribonucleoside-diphosphate reductase activity


id: CL:5661
description: Mixed, incl. RNA polymerase sigma-70 like, and Putative zinc-finger
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5661_Mixed,_incl._RNA_polymerase_sigma-70_like,_and_Putative_zinc-finger


id: CL:5662
description: Mixed, incl. RNA polymerase sigma-70 like, and Putative zinc-finger
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5662_Mixed,_incl._RNA_polymerase_sigma-70_like,_and_Putative_zinc-finger


id: CL:5664
description: RNA polymerase sigma factor 70, region 4 type 2, and Putative zinc-finger
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5664_RNA_polymerase_sigma_factor_70,_region_4_type_2,_and_Putative_zinc-finger


id: CL:5665
description: RNA polymerase sigma-70 like, and Putative zinc-finger
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5665_RNA_polymerase_sigma-70_like,_and_Putative_zinc-finger


id: CL:5667
description: Mixed, incl. Putative zinc-finger, and Aminoacyl-tRNA editing domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5667_Mixed,_incl._Putative_zinc-finger,_and_Aminoacyl-tRNA_editing_domain


id: CL:568
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:568_Mixed,_incl._Acyl-CoA_dehydrogenase,_C-terminal_domain,_and_Lipase,_GDXG,_putative_histidine_active_site

description:
  Mixed, incl. Acyl-CoA dehydrogenase, C-terminal domain, and Lipase, GDXG, putative histidine active site


id: CL:5690
description: Pectin lyase fold, and Glycosyltransferase family 87
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5690_Pectin_lyase_fold,_and_Glycosyltransferase_family_87


id: CL:570
description: Mixed, incl. N-terminal of MaoC-like dehydratase, and MaoC like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:570_Mixed,_incl._N-terminal_of_MaoC-like_dehydratase,_and_MaoC_like_domain


id: CL:5707
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5707_Mixed,_incl._Class_I-like_SAM-dependent_O-methyltransferase,_and_Anti-sigma_factor,_zinc-finger_domain_superfamily

description:
  Mixed, incl. Class I-like SAM-dependent O-methyltransferase, and Anti-sigma factor, zinc-finger domain superfamily


id: CL:5718
description: Mostly uncharacterized, incl. Ion channel, and APOBEC/CMP deaminase, zinc-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5718_Mostly_uncharacterized,_incl._Ion_channel,_and_APOBEC/CMP_deaminase,_zinc-binding


id: CL:5720
description: Mixed, incl. Modulation by symbiont of host cellular process, and Secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5720_Mixed,_incl._Modulation_by_symbiont_of_host_cellular_process,_and_Secretion


id: CL:5743
description: Mixed, incl. Virulence factor BrkB, and Amino acid permease/ SLC12A domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5743_Mixed,_incl._Virulence_factor_BrkB,_and_Amino_acid_permease/_SLC12A_domain


id: CL:5754
description: Mixed, incl. Thioesterase domain, and Dienelactone hydrolase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5754_Mixed,_incl._Thioesterase_domain,_and_Dienelactone_hydrolase_family


id: CL:5769
description: Mixed, incl. PmbA/TldA metallopeptidase domain 1, and NYN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5769_Mixed,_incl._PmbA/TldA_metallopeptidase_domain_1,_and_NYN_domain


id: CL:5771
description: PmbA/TldA metallopeptidase domain 1, and Protein of unknown function (DUF664)
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5771_PmbA/TldA_metallopeptidase_domain_1,_and_Protein_of_unknown_function_(DUF664)


id: CL:5790
description: Mixed, incl. DivIVA family, and UDP-glucose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5790_Mixed,_incl._DivIVA_family,_and_UDP-glucose_metabolic_process


id: CL:5806
description: Mixed, incl. Extracellular vesicle, and Type II protein secretion system complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5806_Mixed,_incl._Extracellular_vesicle,_and_Type_II_protein_secretion_system_complex


id: CL:5808
description: Alditol metabolic process, and Octanoyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5808_Alditol_metabolic_process,_and_Octanoyltransferase_activity


id: CL:5824
description: Extracellular vesicle, and Ribosomal RNA adenine dimethylases
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5824_Extracellular_vesicle,_and_Ribosomal_RNA_adenine_dimethylases


id: CL:5838
description: Mostly uncharacterized, incl. Response to nitric oxide, and Arsenical pump ATPase, ArsA/GET3
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5838_Mostly_uncharacterized,_incl._Response_to_nitric_oxide,_and_Arsenical_pump_ATPase,_ArsA/GET3


id: CL:584
description: Mixed, incl. Lipase, GDXG, putative histidine active site, and Alkaloid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:584_Mixed,_incl._Lipase,_GDXG,_putative_histidine_active_site,_and_Alkaloid_catabolic_process


id: CL:5840
description: Mixed, incl. Response to nitric oxide, and Arsenical pump ATPase, ArsA/GET3
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5840_Mixed,_incl._Response_to_nitric_oxide,_and_Arsenical_pump_ATPase,_ArsA/GET3


id: CL:5841
description: Mixed, incl. Response to nitric oxide, and Arsenical pump ATPase, ArsA/GET3
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5841_Mixed,_incl._Response_to_nitric_oxide,_and_Arsenical_pump_ATPase,_ArsA/GET3


id: CL:5843
description: Arsenical pump ATPase, ArsA/GET3, and 3-beta hydroxysteroid dehydrogenase/isomerase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5843_Arsenical_pump_ATPase,_ArsA/GET3,_and_3-beta_hydroxysteroid_dehydrogenase/isomerase_family


id: CL:5860
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5860_Mixed,_incl._Acetylglucosaminyltransferase_activity,_and_Bacterial_Ig_domain,_transpeptidase-associated

description:
  Mixed, incl. Acetylglucosaminyltransferase activity, and Bacterial Ig domain, transpeptidase-associated


id: CL:5878
description: Mixed, incl. Ppx/GppA phosphatase, and Helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5878_Mixed,_incl._Ppx/GppA_phosphatase,_and_Helix-turn-helix_domain


id: CL:5893
description: Mixed, incl. Bacterial PH domain, and CorA, cytoplasmic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5893_Mixed,_incl._Bacterial_PH_domain,_and_CorA,_cytoplasmic_domain


id: CL:5895
description: Mixed, incl. Phosphonate and phosphinate metabolism, and Bacterial PH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5895_Mixed,_incl._Phosphonate_and_phosphinate_metabolism,_and_Bacterial_PH_domain


id: CL:5907
description: Mixed, incl. Bacterial PH domain, and Alkaline phosphatase PhoX
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5907_Mixed,_incl._Bacterial_PH_domain,_and_Alkaline_phosphatase_PhoX


id: CL:5918
description: Mixed, incl. WD40-like beta propeller, and L,D-transpeptidase catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5918_Mixed,_incl._WD40-like_beta_propeller,_and_L,D-transpeptidase_catalytic_domain


id: CL:5931
description: Mostly uncharacterized, incl. Macromolecule catabolic process, and Transcription factor WhiB
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5931_Mostly_uncharacterized,_incl._Macromolecule_catabolic_process,_and_Transcription_factor_WhiB


id: CL:5932
description: Mostly uncharacterized, incl. Protein catabolic process, and Transcription factor WhiB
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5932_Mostly_uncharacterized,_incl._Protein_catabolic_process,_and_Transcription_factor_WhiB


id: CL:5933
description: Mostly uncharacterized, incl. Protein catabolic process, and Regulation of catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5933_Mostly_uncharacterized,_incl._Protein_catabolic_process,_and_Regulation_of_catabolic_process


id: CL:5934
description: Mostly uncharacterized, incl. Protein catabolic process, and Regulation of catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5934_Mostly_uncharacterized,_incl._Protein_catabolic_process,_and_Regulation_of_catabolic_process


id: CL:5935
description: Mostly uncharacterized, incl. Protein catabolic process, and Regulation of catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5935_Mostly_uncharacterized,_incl._Protein_catabolic_process,_and_Regulation_of_catabolic_process


id: CL:5936
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5936_Mostly_uncharacterized,_incl._Transcription_factor_WhiB,_and_Positive_regulation_of_RNA_metabolic_process

description:
  Mostly uncharacterized, incl. Transcription factor WhiB, and Positive regulation of RNA metabolic process


id: CL:5938
description: Mostly uncharacterized, incl. Transcription factor WhiB, and Enzyme binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5938_Mostly_uncharacterized,_incl._Transcription_factor_WhiB,_and_Enzyme_binding


id: CL:5939
description: Mostly uncharacterized, incl. Transcription factor WhiB, and Enzyme binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5939_Mostly_uncharacterized,_incl._Transcription_factor_WhiB,_and_Enzyme_binding


id: CL:5940
description: Mostly uncharacterized, incl. Transcription factor WhiB, and Enzyme binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5940_Mostly_uncharacterized,_incl._Transcription_factor_WhiB,_and_Enzyme_binding


id: CL:5942
description: Mostly uncharacterized, incl. Transcription factor WhiB, and ANTAR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5942_Mostly_uncharacterized,_incl._Transcription_factor_WhiB,_and_ANTAR_domain


id: CL:5944
description: Mostly uncharacterized, incl. Transcription factor WhiB, and Bifunctional nuclease domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5944_Mostly_uncharacterized,_incl._Transcription_factor_WhiB,_and_Bifunctional_nuclease_domain


id: CL:5946
description: Mixed, incl. Evasion of host immune response, and Chromosome segregation
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5946_Mixed,_incl._Evasion_of_host_immune_response,_and_Chromosome_segregation


id: CL:5948
description: Mixed, incl. Evasion of host immune response, and Chromosome segregation
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5948_Mixed,_incl._Evasion_of_host_immune_response,_and_Chromosome_segregation


id: CL:595
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:595_Mixed,_incl._Carbon_metabolism,_and_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor

description:
  Mixed, incl. Carbon metabolism, and Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor


id: CL:596
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:596_Mixed,_incl._Carbon_metabolism,_and_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor

description:
  Mixed, incl. Carbon metabolism, and Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor


id: CL:597
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:597_Mixed,_incl._Carbon_metabolism,_and_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor

description:
  Mixed, incl. Carbon metabolism, and Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor


id: CL:5971
description: Transcription factor WhiB, and Transcription elongation factor GreA/GreB family
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:5971_Transcription_factor_WhiB,_and_Transcription_elongation_factor_GreA/GreB_family


id: CL:598
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:598_Mixed,_incl._Carbon_metabolism,_and_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor

description:
[cell repeats an earlier one in this file: 131 characters]


id: CL:599
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:599_Mixed,_incl._Citrate_cycle_(TCA_cycle),_and_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor

description:
  Mixed, incl. Citrate cycle (TCA cycle), and Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor


id: CL:600
description: Mixed, incl. Citrate cycle (TCA cycle), and Fatty acid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:600_Mixed,_incl._Citrate_cycle_(TCA_cycle),_and_Fatty_acid_biosynthesis


id: CL:6006
description: Mixed, incl. GtrA-like protein, and RDD family
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6006_Mixed,_incl._GtrA-like_protein,_and_RDD_family


id: CL:601
description: Mixed, incl. Citrate cycle (TCA cycle), and Fatty acid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:601_Mixed,_incl._Citrate_cycle_(TCA_cycle),_and_Fatty_acid_biosynthesis


id: CL:602
description: Citrate cycle (TCA cycle), and FAD-dependent oxidoreductase 2, FAD binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:602_Citrate_cycle_(TCA_cycle),_and_FAD-dependent_oxidoreductase_2,_FAD_binding_domain


id: CL:6022
description: Mixed, incl. Mannose type O-glycan biosynthesis, and rRNA (cytosine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6022_Mixed,_incl._Mannose_type_O-glycan_biosynthesis,_and_rRNA_(cytosine)_methyltransferase_activity


id: CL:6041
description: Mixed, incl. Proteasomal protein catabolic process, and Lsr2
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6041_Mixed,_incl._Proteasomal_protein_catabolic_process,_and_Lsr2


id: CL:6043
description: Proteasomal protein catabolic process, and Bacterial proteasome activator
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6043_Proteasomal_protein_catabolic_process,_and_Bacterial_proteasome_activator


id: CL:6048
description: Proteasomal protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6048_Proteasomal_protein_catabolic_process


id: CL:605
description: Citrate cycle (TCA cycle), and Aminoacid dehydrogenase-like, N-terminal domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:605_Citrate_cycle_(TCA_cycle),_and_Aminoacid_dehydrogenase-like,_N-terminal_domain_superfamily


id: CL:606
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:606_Mixed,_incl._Tricarboxylic_acid_cycle,_and_Aminoacid_dehydrogenase-like,_N-terminal_domain_superfamily

description:
  Mixed, incl. Tricarboxylic acid cycle, and Aminoacid dehydrogenase-like, N-terminal domain superfamily


id: CL:6061
description: Mixed, incl. Rv2714-like, and tRNA (m1A) methyltransferase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6061_Mixed,_incl._Rv2714-like,_and_tRNA_(m1A)_methyltransferase_complex


id: CL:607
description: Mixed, incl. Tricarboxylic acid cycle, and Malic oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:607_Mixed,_incl._Tricarboxylic_acid_cycle,_and_Malic_oxidoreductase


id: CL:6104
description: Mixed, incl. tRNA endonuclease-like domain superfamily, and Helix-turn-helix, type 11
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6104_Mixed,_incl._tRNA_endonuclease-like_domain_superfamily,_and_Helix-turn-helix,_type_11


id: CL:611
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:611_L-lactate/malate_dehydrogenase,_and_Acyltransferase_activity,_acyl_groups_converted_into_alkyl_on_transfer

description:
  L-lactate/malate dehydrogenase, and Acyltransferase activity, acyl groups converted into alkyl on transfer


id: CL:6115
description: Mixed, incl. Regulator of K+ conductance, N-terminal, and Amino acid permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6115_Mixed,_incl._Regulator_of_K+_conductance,_N-terminal,_and_Amino_acid_permease


id: CL:6117
description: Regulator of K+ conductance, N-terminal, and Amino acid permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6117_Regulator_of_K+_conductance,_N-terminal,_and_Amino_acid_permease


id: CL:6136
description: Mixed, incl. Alkali metal ion binding, and O-methyltransferase COMT-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6136_Mixed,_incl._Alkali_metal_ion_binding,_and_O-methyltransferase_COMT-type


id: CL:6146
description: Mixed, incl. Mycothiol metabolic process, and Pirin
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6146_Mixed,_incl._Mycothiol_metabolic_process,_and_Pirin


id: CL:6147
description: Mixed, incl. Mycothiol metabolic process, and DSBA-like thioredoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6147_Mixed,_incl._Mycothiol_metabolic_process,_and_DSBA-like_thioredoxin_domain


id: CL:6150
description: Mycothiol metabolic process, and DSBA-like thioredoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6150_Mycothiol_metabolic_process,_and_DSBA-like_thioredoxin_domain


id: CL:6175
description: Mixed, incl. Alkaline-phosphatase-like, core domain superfamily, and Aldo/keto reductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6175_Mixed,_incl._Alkaline-phosphatase-like,_core_domain_superfamily,_and_Aldo/keto_reductase_family


id: CL:6198
description: Mixed, incl. ABC transporters, and Bacterial regulatory proteins, tetR family
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6198_Mixed,_incl._ABC_transporters,_and_Bacterial_regulatory_proteins,_tetR_family


id: CL:6199
description: Mixed, incl. ABC transporter-like, conserved site, and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6199_Mixed,_incl._ABC_transporter-like,_conserved_site,_and_ABC-2_transporter


id: CL:6200
description: Mostly uncharacterized, incl. Type 1 protein exporter, and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6200_Mostly_uncharacterized,_incl._Type_1_protein_exporter,_and_ABC-2_transporter


id: CL:6201
description: Mixed, incl. Type 1 protein exporter, and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6201_Mixed,_incl._Type_1_protein_exporter,_and_ABC-2_transporter


id: CL:6202
description: Mixed, incl. Type 1 protein exporter, and ABC-2 type transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6202_Mixed,_incl._Type_1_protein_exporter,_and_ABC-2_type_transporter


id: CL:6203
description: Mixed, incl. Type 1 protein exporter, and ABC-2 type transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6203_Mixed,_incl._Type_1_protein_exporter,_and_ABC-2_type_transporter


id: CL:6205
description: Mixed, incl. Type 1 protein exporter, and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6205_Mixed,_incl._Type_1_protein_exporter,_and_ABC-2_transporter


id: CL:6207
description: Type 1 protein exporter, and ABC transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6207_Type_1_protein_exporter,_and_ABC_transporter


id: CL:6229
description: Mixed, incl. AAA domain, and TAP-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6229_Mixed,_incl._AAA_domain,_and_TAP-like_protein


id: CL:6239
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6239_Mixed,_incl._ABC-2_family_transporter_protein,_and_Calcineurin-like_phosphoesterase_domain,_lpxH-type

description:
  Mixed, incl. ABC-2 family transporter protein, and Calcineurin-like phosphoesterase domain, lpxH-type


id: CL:6251
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6251_Mixed,_incl._ABC-2_transporter,_and_Daunorubicin_resistance_ABC_transporter_ATP-binding_subunit_DrrA

description:
  Mixed, incl. ABC-2 transporter, and Daunorubicin resistance ABC transporter ATP-binding subunit DrrA


id: CL:6253
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6253_Mixed,_incl._Daunorubicin_resistance_ABC_transporter_ATP-binding_subunit_DrrA,_and_Glycoside_transport

description:
  Mixed, incl. Daunorubicin resistance ABC transporter ATP-binding subunit DrrA, and Glycoside transport


id: CL:6271
description: Mixed, incl. MftR, C-terminal, and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6271_Mixed,_incl._MftR,_C-terminal,_and_ABC-2_transporter


id: CL:6282
description: Mixed, incl. ABC-2 type transporter, and Sulfite exporter TauE/SafE
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6282_Mixed,_incl._ABC-2_type_transporter,_and_Sulfite_exporter_TauE/SafE


id: CL:6291
description: Mostly uncharacterized, incl. Diol metabolic process, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6291_Mostly_uncharacterized,_incl._Diol_metabolic_process,_and_ABC-2_family_transporter_protein


id: CL:6293
description: Mixed, incl. Diol metabolic process, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6293_Mixed,_incl._Diol_metabolic_process,_and_ABC-2_family_transporter_protein


id: CL:6303
description: Mixed, incl. N-acetylglucosaminylinositol deacetylase activity, and Elongation factor Tu domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6303_Mixed,_incl._N-acetylglucosaminylinositol_deacetylase_activity,_and_Elongation_factor_Tu_domain_2


id: CL:631
description: Pyruvate ferredoxin/flavodoxin oxidoreductase, and 7Fe ferredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:631_Pyruvate_ferredoxin/flavodoxin_oxidoreductase,_and_7Fe_ferredoxin


id: CL:6314
description: Mostly uncharacterized, incl. Zinc ion transport, and DTXR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6314_Mostly_uncharacterized,_incl._Zinc_ion_transport,_and_DTXR-type_HTH_domain


id: CL:6315
description: Mostly uncharacterized, incl. Zinc ion transport, and DTXR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6315_Mostly_uncharacterized,_incl._Zinc_ion_transport,_and_DTXR-type_HTH_domain


id: CL:6316
description: Mixed, incl. Zinc ion transport, and ABC transporter, TroCD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6316_Mixed,_incl._Zinc_ion_transport,_and_ABC_transporter,_TroCD-like


id: CL:6319
description: Zinc ion transport, and ABC transporter, TroCD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6319_Zinc_ion_transport,_and_ABC_transporter,_TroCD-like


id: CL:6344
description: Mixed, incl. HIT domain, and DTXR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6344_Mixed,_incl._HIT_domain,_and_DTXR-type_HTH_domain


id: CL:6356
description: Mixed, incl. D-amino acid catabolic process, and Aminomethyltransferase, folate-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6356_Mixed,_incl._D-amino_acid_catabolic_process,_and_Aminomethyltransferase,_folate-binding_domain


id: CL:6367
description: Mixed, incl. Thiamine diphosphate metabolic process, and Metallo-beta-lactamase
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6367_Mixed,_incl._Thiamine_diphosphate_metabolic_process,_and_Metallo-beta-lactamase


id: CL:6369
description: Mixed, incl. Metallo-beta-lactamase, and Blockage of phagosome acidification
name:
  Local Network Cluster (STRING).STRING_v12.0_1848_STRINGid_CL:6369_Mixed,_incl._Metallo-beta-lactamase,_and_Blockage_of_phagosome_acidification


