# geneInfo

ensembl_gene_id: BKK55_00010
symbol: glpE
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide.


ensembl_gene_id: BKK55_00015
symbol: OOF59806.1
gene_biotype: protein_coding
description:
  Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00020
symbol: OOF59807.1
gene_biotype: protein_coding
description:
  Transcriptional regulator IlvY; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: BKK55_00025
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: BKK55_00030
symbol: OOF59809.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00035
symbol: OOF59810.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00045
symbol: OOF59812.1
gene_biotype: protein_coding
description:
  Autotransporter outer membrane beta-barrel domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00050
symbol: purT
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase 2; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family.


ensembl_gene_id: BKK55_00055
symbol: luxS
gene_biotype: protein_coding
description:
  S-ribosylhomocysteine lyase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family.


ensembl_gene_id: BKK55_00065
symbol: OOF59816.1
gene_biotype: protein_coding
description:
  Galactoside O-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00080
symbol: OOF59819.1
gene_biotype: protein_coding
description:
  Exopolyphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GppA/Ppx family.


ensembl_gene_id: BKK55_00085
symbol: OOF59820.1
gene_biotype: protein_coding
description:
  DUF490 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00095
symbol: OOF59835.1
gene_biotype: protein_coding
description:
  sigma-E factor regulatory protein RseB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00100
symbol: OOF59821.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish d [...]


ensembl_gene_id: BKK55_00105
symbol: OOF59822.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor RpoE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: BKK55_00115
symbol: OOF59824.1
gene_biotype: protein_coding
description:
  PTS fructose transporter subunit EIIBC; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00120
symbol: OOF59825.1
gene_biotype: protein_coding
description:
  1-phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: BKK55_00125
symbol: OOF59826.1
gene_biotype: protein_coding
description:
  Bifunctional PTS fructose transporter subunit IIA/HPr protein; Phosphoenolpyruvate (PEP)-dependent, sugar transporting phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIA is phosphorylated by phospho-HP which then transfers the phosphoryl group to the IIB componentr; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00145
symbol: OOF59830.1
gene_biotype: protein_coding
description:
  Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00150
symbol: OOF59831.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00155
symbol: tmk
gene_biotype: protein_coding
description:
  dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: BKK55_00160
symbol: mltG
gene_biotype: protein_coding
description:
  Cell division protein YceG; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: BKK55_00165
symbol: OOF59567.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: BKK55_00200
symbol: OOF59633.1
gene_biotype: protein_coding
description:
  Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: BKK55_00205
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: BKK55_00210
symbol: OOF59575.1
gene_biotype: protein_coding
description:
  Sulfur transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00215
symbol: OOF59576.1
gene_biotype: protein_coding
description:
  Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: BKK55_00225
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: BKK55_00235
symbol: deaD
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.


ensembl_gene_id: BKK55_00240
symbol: mltF
gene_biotype: protein_coding
description:
  Lytic transglycosylase F; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella.


ensembl_gene_id: BKK55_00245
symbol: bamD
gene_biotype: protein_coding
description:
  Outer membrane protein assembly factor BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: BKK55_00250
symbol: OOF59583.1
gene_biotype: protein_coding
description:
  23S rRNA pseudouridine(1911/1915/1917) synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: BKK55_00255
symbol: OOF59584.1
gene_biotype: protein_coding
description:
  Multi-copper polyphenol oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the multicopper oxidase YfiH/RL5 family.


ensembl_gene_id: BKK55_00260
symbol: OOF59585.1
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvA; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: BKK55_00265
symbol: OOF59586.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0301 (AlgH) family.


ensembl_gene_id: BKK55_00270
symbol: OOF59587.1
gene_biotype: protein_coding
description:
  16S rRNA (uracil(1498)-N(3))-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: BKK55_00280
symbol: nhaB
gene_biotype: protein_coding
description:
  Na+/H+ antiporter NhaB; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaB Na(+)/H(+) (TC 2.A.34) antiporter family.


ensembl_gene_id: BKK55_00285
symbol: dsbB
gene_biotype: protein_coding
description:
  Disulfide bond formation protein B; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family.


ensembl_gene_id: BKK55_00295
symbol: OOF59592.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the P(II) protein family.


ensembl_gene_id: BKK55_00300
symbol: OOF59593.1
gene_biotype: protein_coding
description:
  Molybdopterin adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00305
symbol: OOF59594.1
gene_biotype: protein_coding
description:
  SLC13 family permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00315
symbol: lpxB
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: BKK55_00320
symbol: lpxA
gene_biotype: protein_coding
description:
  acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: BKK55_00325
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: BKK55_00330
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: BKK55_00335
symbol: OOF59599.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the skp family.


ensembl_gene_id: BKK55_00340
symbol: bamA
gene_biotype: protein_coding
description:
  Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: BKK55_00345
symbol: OOF59601.1
gene_biotype: protein_coding
description:
  RIP metalloprotease RseP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00350
symbol: OOF59602.1
gene_biotype: protein_coding
description:
  Phosphatidate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDS family.


ensembl_gene_id: BKK55_00355
symbol: uppS
gene_biotype: protein_coding
description:
  Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di- trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide.


ensembl_gene_id: BKK55_00360
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: BKK55_00365
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: BKK55_00380
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: BKK55_00385
symbol: rpsB
gene_biotype: protein_coding
description:
  30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family.


ensembl_gene_id: BKK55_00390
symbol: anmK
gene_biotype: protein_coding
description:
  anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.


ensembl_gene_id: BKK55_00400
symbol: OOF59612.1
gene_biotype: protein_coding
description:
  YicC family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00405
symbol: OOF59613.1
gene_biotype: protein_coding
description:
  Tyrosine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00410
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: BKK55_00415
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: BKK55_00420
symbol: rpsU
gene_biotype: protein_coding
description:
  30S ribosomal protein S21; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS21 family.


ensembl_gene_id: BKK55_00425
symbol: tsaD
gene_biotype: protein_coding
description:
  tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: BKK55_00435
symbol: tdk
gene_biotype: protein_coding
description:
  Thymidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00445
symbol: OOF59620.1
gene_biotype: protein_coding
description:
  MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00450
symbol: OOF59621.1
gene_biotype: protein_coding
description:
  Co/Zn/Cd efflux system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00460
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase (NAD(+)) LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: BKK55_00465
symbol: zipA
gene_biotype: protein_coding
description:
  Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.


ensembl_gene_id: BKK55_00470
symbol: cysZ
gene_biotype: protein_coding
description:
  Sulfate transporter CysZ; High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway; Belongs to the CysZ family.


ensembl_gene_id: BKK55_00475
symbol: OOF59626.1
gene_biotype: protein_coding
description:
  Cysteine synthase A; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family.


ensembl_gene_id: BKK55_00490
symbol: OOF59628.1
gene_biotype: protein_coding
description:
  Arabinose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00495
symbol: OOF59629.1
gene_biotype: protein_coding
description:
  LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: BKK55_00500
symbol: OOF59630.1
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen III oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: BKK55_00510
symbol: yihI
gene_biotype: protein_coding
description:
  GTPase-activating protein; A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function. May play a role in ribosome biogenesis. Belongs to the YihI family.


ensembl_gene_id: BKK55_00520
symbol: BKK55_00520
gene_biotype: protein_coding
description:
  Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: BKK55_00525
symbol: OOF59415.1
gene_biotype: protein_coding
description:
  HugZ family heme oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00530
symbol: pdxH
gene_biotype: protein_coding
description:
  Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).


ensembl_gene_id: BKK55_00535
symbol: OOF59417.1
gene_biotype: protein_coding
description:
  Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the alkaline phosphatase family.


ensembl_gene_id: BKK55_00540
symbol: OOF59418.1
gene_biotype: protein_coding
description:
  Nucleoside transporter NupC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family.


ensembl_gene_id: BKK55_00545
symbol: deoD
gene_biotype: protein_coding
description:
  Purine-nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00550
symbol: OOF59420.1
gene_biotype: protein_coding
description:
  D-hexose-6-phosphate mutarotase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glucose-6-phosphate 1-epimerase family.


ensembl_gene_id: BKK55_00555
symbol: OOF59421.1
gene_biotype: protein_coding
description:
  Anaerobic sulfatase maturase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00560
symbol: OOF59422.1
gene_biotype: protein_coding
description:
  Cyclic nucleotide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00565
symbol: OOF59423.1
gene_biotype: protein_coding
description:
  Arylsulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00570
symbol: OOF59424.1
gene_biotype: protein_coding
description:
  Solute:sodium symporter family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: BKK55_00580
symbol: OOF59426.1
gene_biotype: protein_coding
description:
  acyl-[ACP]--phospholipid O-acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00630
symbol: surE
gene_biotype: protein_coding
description:
  5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: BKK55_00635
symbol: truD
gene_biotype: protein_coding
description:
  tRNA pseudouridine(13) synthase TruD; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.


ensembl_gene_id: BKK55_00640
symbol: rraB
gene_biotype: protein_coding
description:
  Ribonuclease E inhibitor B; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome.


ensembl_gene_id: BKK55_00650
symbol: OOF59438.1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00660
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.


ensembl_gene_id: BKK55_00665
symbol: OOF59441.1
gene_biotype: protein_coding
description:
  Oligopeptide ABC transporter substrate-binding protein OppA; Is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00670
symbol: oppB
gene_biotype: protein_coding
description:
  Oligopeptide transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00675
symbol: OOF59443.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter permease; With OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00680
symbol: OOF59444.1
gene_biotype: protein_coding
description:
  Oligopeptide ABC transporter ATP-binding protein OppD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: BKK55_00685
symbol: OOF59445.1
gene_biotype: protein_coding
description:
  Oligopeptide ABC transporter ATP-binding protein OppF; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: BKK55_00690
symbol: mscL
gene_biotype: protein_coding
description:
  Large-conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: BKK55_00695
symbol: OOF59447.1
gene_biotype: protein_coding
description:
  Trk system potassium transport protein TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00700
symbol: OOF59448.1
gene_biotype: protein_coding
description:
  Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00705
symbol: OOF59459.1
gene_biotype: protein_coding
description:
  16S rRNA (cytosine(967)-C(5))-methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: BKK55_00710
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: BKK55_00715
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: BKK55_00720
symbol: OOF59451.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00725
symbol: OOF59452.1
gene_biotype: protein_coding
description:
  ADP-ribosylglycohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00735
symbol: BKK55_00735
gene_biotype: protein_coding
description:
  ADP-ribosylglycohydrolase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00745
symbol: gpt
gene_biotype: protein_coding
description:
  Xanthine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.


ensembl_gene_id: BKK55_00750
symbol: OOF59456.1
gene_biotype: protein_coding
description:
  Cytosol nonspecific dipeptidase; Catalyzes the hydrolysis of Xaa-His dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00760
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.


ensembl_gene_id: BKK55_00765
symbol: OOF59190.1
gene_biotype: protein_coding
description:
  Aminoimidazole riboside kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: BKK55_00770
symbol: OOF59118.1
gene_biotype: protein_coding
description:
  Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00775
symbol: OOF59119.1
gene_biotype: protein_coding
description:
  Fructosidase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.


ensembl_gene_id: BKK55_00780
symbol: OOF59120.1
gene_biotype: protein_coding
description:
  NAD(P)H-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00785
symbol: OOF59121.1
gene_biotype: protein_coding
description:
  TIGR01619 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00790
symbol: OOF59122.1
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00795
symbol: OOF59123.1
gene_biotype: protein_coding
description:
  N-6 DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00800
symbol: OOF59124.1
gene_biotype: protein_coding
description:
  Restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00805
symbol: OOF59191.1
gene_biotype: protein_coding
description:
  Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00810
symbol: OOF59192.1
gene_biotype: protein_coding
description:
  RNA pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00815
symbol: clsA
gene_biotype: protein_coding
description:
  Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.


ensembl_gene_id: BKK55_00825
symbol: BKK55_00825
gene_biotype: protein_coding
description:
  Hypothetical protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00830
symbol: OOF59127.1
gene_biotype: protein_coding
description:
  MmcQ protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00835
symbol: OOF59128.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00845
symbol: BKK55_00845
gene_biotype: protein_coding
description:
  Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00850
symbol: OOF59130.1
gene_biotype: protein_coding
description:
  Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00855
symbol: OOF59131.1
gene_biotype: protein_coding
description:
  Fe3+-hydroxamate ABC transporter permease FhuB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: BKK55_00860
symbol: OOF59132.1
gene_biotype: protein_coding
description:
  TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00865
symbol: OOF59133.1
gene_biotype: protein_coding
description:
  TIGR01620 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00880
symbol: OOF59136.1
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00885
symbol: OOF59137.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00895
symbol: OOF59139.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter ATP-binding protein; Involved in resistance to antimibial peptides; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: BKK55_00900
symbol: OOF59140.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00905
symbol: OOF59141.1
gene_biotype: protein_coding
description:
  Sodium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00910
symbol: OOF59193.1
gene_biotype: protein_coding
description:
  Signal peptide peptidase SppA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00915
symbol: OOF59142.1
gene_biotype: protein_coding
description:
  Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00920
symbol: metXA
gene_biotype: protein_coding
description:
  Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.


ensembl_gene_id: BKK55_00930
symbol: OOF59144.1
gene_biotype: protein_coding
description:
  Lysine-sensitive aspartokinase 3; Catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; functions in amino acid biosynthesis; lysine sensitive; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family.


ensembl_gene_id: BKK55_00940
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: BKK55_00945
symbol: OOF59147.1
gene_biotype: protein_coding
description:
  DUF484 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00950
symbol: fbp
gene_biotype: protein_coding
description:
  Fructose-bisphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FBPase class 1 family.


ensembl_gene_id: BKK55_00955
symbol: OOF59149.1
gene_biotype: protein_coding
description:
  Lipopolysaccharide ABC transporter permease LptG; With LptABCF is involved in the transport of lipopolysaccharides; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00960
symbol: OOF59150.1
gene_biotype: protein_coding
description:
  LPS export ABC transporter permease LptF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00965
symbol: pepA
gene_biotype: protein_coding
description:
  Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: BKK55_00970
symbol: OOF59152.1
gene_biotype: protein_coding
description:
  Cobalt ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00975
symbol: OOF59153.1
gene_biotype: protein_coding
description:
  ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_00980
symbol: OOF59154.1
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CbiM; Catalyzes the ATP-dependent transport of cobalt; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01000
symbol: OOF59158.1
gene_biotype: protein_coding
description:
  NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.


ensembl_gene_id: BKK55_01005
symbol: OOF59159.1
gene_biotype: protein_coding
description:
  NAD(P) transhydrogenase subunit alpha; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the AlaDH/PNT family.


ensembl_gene_id: BKK55_01015
symbol: OOF59161.1
gene_biotype: protein_coding
description:
  Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01025
symbol: BKK55_01025
gene_biotype: protein_coding
description:
  Hypothetical protein; Frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01045
symbol: OOF59166.1
gene_biotype: protein_coding
description:
  Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01075
symbol: OOF59172.1
gene_biotype: protein_coding
description:
  Serine peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family.


ensembl_gene_id: BKK55_01080
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: BKK55_01085
symbol: queC
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine synthase QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.


ensembl_gene_id: BKK55_01090
symbol: OOF59175.1
gene_biotype: protein_coding
description:
  6-carboxytetrahydropterin synthase QueD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01095
symbol: queE
gene_biotype: protein_coding
description:
  Radical SAM protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: BKK55_01100
symbol: OOF59177.1
gene_biotype: protein_coding
description:
  Nif3-like dinuclear metal center hexameric protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01105
symbol: OOF59178.1
gene_biotype: protein_coding
description:
  Enoyl-[acyl-carrier-protein] reductase; Catalyzes a key regulatory step in fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01110
symbol: rnb
gene_biotype: protein_coding
description:
  Exoribonuclease II; Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction.


ensembl_gene_id: BKK55_01115
symbol: OOF59180.1
gene_biotype: protein_coding
description:
  5'-deoxynucleotidase; Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates.


ensembl_gene_id: BKK55_01120
symbol: OOF59181.1
gene_biotype: protein_coding
description:
  Outer membrane-stress sensor serine endopeptidase DegS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01125
symbol: OOF59182.1
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: BKK55_01130
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional regulator NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: BKK55_01135
symbol: recC
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V subunit gamma; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and re [...]


ensembl_gene_id: BKK55_01155
symbol: OOF59188.1
gene_biotype: protein_coding
description:
  Prepilin-type N-terminal cleavage/methylation domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01160
symbol: OOF59195.1
gene_biotype: protein_coding
description:
  Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the inositol monophosphatase superfamily.


ensembl_gene_id: BKK55_01165
symbol: OOF59189.1
gene_biotype: protein_coding
description:
  Cytochrome-c peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01175
symbol: OOF58869.1
gene_biotype: protein_coding
description:
  DDE transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01225
symbol: BKK55_01225
gene_biotype: protein_coding
description:
  Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: BKK55_01230
symbol: OOF58839.1
gene_biotype: protein_coding
description:
  Class II glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01235
symbol: OOF58840.1
gene_biotype: protein_coding
description:
  Glutathione-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01260
symbol: OOF58844.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: BKK55_01265
symbol: OOF58845.1
gene_biotype: protein_coding
description:
  Recombination-associated protein RdgC; May be involved in recombination. Belongs to the RdgC family.


ensembl_gene_id: BKK55_01270
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: BKK55_01275
symbol: OOF58847.1
gene_biotype: protein_coding
description:
  3-phenylpropionic acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01280
symbol: xerD
gene_biotype: protein_coding
description:
  Site-specific tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: BKK55_01285
symbol: OOF58849.1
gene_biotype: protein_coding
description:
  Glycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycerate kinase type-1 family.


ensembl_gene_id: BKK55_01290
symbol: OOF58850.1
gene_biotype: protein_coding
description:
  Gluconate:proton symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01335
symbol: pepE
gene_biotype: protein_coding
description:
  Type VI secretion protein; Hydrolyzes dipeptides containing N-terminal aspartate residues. May play a role in allowing the cell to use peptide aspartate to spare carbon otherwise required for the synthesis of the aspartate family of amino acids.


ensembl_gene_id: BKK55_01340
symbol: OOF58794.1
gene_biotype: protein_coding
description:
  C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01345
symbol: OOF58795.1
gene_biotype: protein_coding
description:
  Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01350
symbol: OOF58796.1
gene_biotype: protein_coding
description:
  Tagatose-bisphosphate aldolase; Catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in Streptococcus pyogenes there are two paralogs of tagatose-bisphosphate aldolase, encoded by lacD1 and lacD2; expression of lacD1 is highly regulated by environmental conditions while lacD2 specializes in an efficient utilization of carbohydrate sources; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01355
symbol: OOF58797.1
gene_biotype: protein_coding
description:
  D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01360
symbol: OOF58798.1
gene_biotype: protein_coding
description:
  PTS galactitol transporter subunit IIA; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01365
symbol: OOF58799.1
gene_biotype: protein_coding
description:
  PTS galactitol transporter subunit IIB; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01370
symbol: OOF58800.1
gene_biotype: protein_coding
description:
  PTS galactitol transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01375
symbol: OOF58801.1
gene_biotype: protein_coding
description:
  Galactitol-1-phosphate 5-dehydrogenase; Zn-dependent; NAD(P)-binding; catalyzes the formation of tagatose-6-phosphate from galactitol-1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01385
symbol: OOF58803.1
gene_biotype: protein_coding
description:
  2',3'-cyclic-nucleotide 2'-phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5'-nucleotidase family.


ensembl_gene_id: BKK55_01390
symbol: OOF58804.1
gene_biotype: protein_coding
description:
  Carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01405
symbol: OOF58807.1
gene_biotype: protein_coding
description:
  Sodium-dependent transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.


ensembl_gene_id: BKK55_01410
symbol: OOF58808.1
gene_biotype: protein_coding
description:
  3-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01415
symbol: OOF58809.1
gene_biotype: protein_coding
description:
  Acetolactate synthase 2 catalytic subunit; Catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01420
symbol: OOF58810.1
gene_biotype: protein_coding
description:
  Acetolactate synthase 2 small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01425
symbol: ilvD
gene_biotype: protein_coding
description:
  Dihydroxy-acid dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IlvD/Edd family.


ensembl_gene_id: BKK55_01430
symbol: ilvA
gene_biotype: protein_coding
description:
  PLP-dependent threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: BKK55_01440
symbol: OOF58814.1
gene_biotype: protein_coding
description:
  C4-dicarboxylate ABC transporter; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.


ensembl_gene_id: BKK55_01445
symbol: OOF58815.1
gene_biotype: protein_coding
description:
  L-asparaginase 2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the asparaginase 1 family.


ensembl_gene_id: BKK55_01450
symbol: OOF58816.1
gene_biotype: protein_coding
description:
  Rhodanese-like domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01455
symbol: secB
gene_biotype: protein_coding
description:
  Protein-export chaperone SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.


ensembl_gene_id: BKK55_01460
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: BKK55_01465
symbol: OOF58819.1
gene_biotype: protein_coding
description:
  Serine O-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01470
symbol: OOF58820.1
gene_biotype: protein_coding
description:
  Shikimate 5-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01475
symbol: OOF58821.1
gene_biotype: protein_coding
description:
  Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the PNP/UDP phosphorylase family.


ensembl_gene_id: BKK55_01480
symbol: OOF58822.1
gene_biotype: protein_coding
description:
  ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01485
symbol: OOF58823.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor sulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01490
symbol: OOF58824.1
gene_biotype: protein_coding
description:
  SEC-C motif-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0225 family.


ensembl_gene_id: BKK55_01500
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: BKK55_01505
symbol: OOF58827.1
gene_biotype: protein_coding
description:
  [citrate (pro-3S)-lyase] ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.


ensembl_gene_id: BKK55_01510
symbol: coaA
gene_biotype: protein_coding
description:
  Type I pantothenate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01550
symbol: OOF58667.1
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase HrpA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01560
symbol: nudF
gene_biotype: protein_coding
description:
  ADP-ribose diphosphatase; ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01565
symbol: cpdA
gene_biotype: protein_coding
description:
  3',5'-cyclic-AMP phosphodiesterase; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.


ensembl_gene_id: BKK55_01570
symbol: miaB
gene_biotype: protein_coding
description:
  tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: BKK55_01575
symbol: OOF58672.1
gene_biotype: protein_coding
description:
  DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01580
symbol: gmhA
gene_biotype: protein_coding
description:
  Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.


ensembl_gene_id: BKK55_01585
symbol: OOF58674.1
gene_biotype: protein_coding
description:
  Arginine ABC transporter ATP-binding protein ArtP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01590
symbol: OOF58675.1
gene_biotype: protein_coding
description:
  Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: BKK55_01595
symbol: OOF58676.1
gene_biotype: protein_coding
description:
  ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01600
symbol: artM
gene_biotype: protein_coding
description:
  Arginine transporter permease subunit ArtM; With ArtPQJI acts to transport arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01610
symbol: OOF58679.1
gene_biotype: protein_coding
description:
  Carbon starvation protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01615
symbol: mraZ
gene_biotype: protein_coding
description:
  Cell division/cell wall cluster transcriptional repressor MraZ; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MraZ family.


ensembl_gene_id: BKK55_01620
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA (cytosine(1402)-N(4))-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: BKK55_01625
symbol: ftsL
gene_biotype: protein_coding
description:
  Cell division protein FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: BKK55_01630
symbol: ftsI
gene_biotype: protein_coding
description:
  Peptidoglycan synthase; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum.


ensembl_gene_id: BKK55_01635
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: BKK55_01640
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: BKK55_01645
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: BKK55_01650
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: BKK55_01655
symbol: ftsW
gene_biotype: protein_coding
description:
  Cell division protein FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily.


ensembl_gene_id: BKK55_01660
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: BKK55_01670
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: BKK55_01675
symbol: ftsQ
gene_biotype: protein_coding
description:
  Cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly.


ensembl_gene_id: BKK55_01680
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: BKK55_01685
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: BKK55_01690
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: BKK55_01695
symbol: ushA
gene_biotype: protein_coding
description:
  Bifunctional UDP-sugar hydrolase/5'-nucleotidase; Catalyzes the degradation of periplasmic UDP-glucose to uridine, glucose-1-phosphate and inorganic phosphate; specific for uridine nucleotides; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5'-nucleotidase family.


ensembl_gene_id: BKK55_01700
symbol: OOF58697.1
gene_biotype: protein_coding
description:
  Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01710
symbol: OOF58699.1
gene_biotype: protein_coding
description:
  GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01715
symbol: OOF58700.1
gene_biotype: protein_coding
description:
  Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 31 family.


ensembl_gene_id: BKK55_01725
symbol: OOF58702.1
gene_biotype: protein_coding
description:
  C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01735
symbol: OOF58704.1
gene_biotype: protein_coding
description:
  Ketodeoxygluconokinase; Catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate-6-phosphate from 2-dehydro-3-deoxy-D-gluconate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01740
symbol: OOF58705.1
gene_biotype: protein_coding
description:
  Converts D-mannonate to D-mannuronate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: BKK55_01745
symbol: uxaC
gene_biotype: protein_coding
description:
  Glucuronate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01750
symbol: OOF58707.1
gene_biotype: protein_coding
description:
  2-dehydro-3-deoxyphosphogluconate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01760
symbol: OOF58709.1
gene_biotype: protein_coding
description:
  Lactate utilization protein C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01765
symbol: OOF58710.1
gene_biotype: protein_coding
description:
  Iron-sulfur cluster-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01775
symbol: OOF58712.1
gene_biotype: protein_coding
description:
  Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: BKK55_01780
symbol: cysS
gene_biotype: protein_coding
description:
  cysteine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: BKK55_01785
symbol: OOF58714.1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: BKK55_01790
symbol: OOF58715.1
gene_biotype: protein_coding
description:
  Deoxyribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01795
symbol: OOF58716.1
gene_biotype: protein_coding
description:
  Hemocin immunity protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01800
symbol: eno
gene_biotype: protein_coding
description:
  Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.


ensembl_gene_id: BKK55_01810
symbol: OOF58543.1
gene_biotype: protein_coding
description:
  HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01825
symbol: OOF58546.1
gene_biotype: protein_coding
description:
  Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01830
symbol: OOF58547.1
gene_biotype: protein_coding
description:
  AcrR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01835
symbol: OOF58548.1
gene_biotype: protein_coding
description:
  HlyD family secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01840
symbol: OOF58549.1
gene_biotype: protein_coding
description:
  Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01850
symbol: OOF58551.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.


ensembl_gene_id: BKK55_01865
symbol: murQ
gene_biotype: protein_coding
description:
  N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. Together with AnmK, is also required for the utilization of anhydro-N-acetylmuramic acid (anhMurNAc) either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling.


ensembl_gene_id: BKK55_01885
symbol: OOF58382.1
gene_biotype: protein_coding
description:
  Chain length determination protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01890
symbol: OOF58383.1
gene_biotype: protein_coding
description:
  Type I glutamate--ammonia ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01895
symbol: OOF58384.1
gene_biotype: protein_coding
description:
  GTP-binding protein TypA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01900
symbol: OOF58385.1
gene_biotype: protein_coding
description:
  Orotate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01905
symbol: OOF58386.1
gene_biotype: protein_coding
description:
  Aminotransferase; Broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01915
symbol: menD
gene_biotype: protein_coding
description:
  2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily.


ensembl_gene_id: BKK55_01920
symbol: menH
gene_biotype: protein_coding
description:
  2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase; Catalyzes a proton abstraction reaction that results in 2,5- elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6- hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC).


ensembl_gene_id: BKK55_01925
symbol: OOF58390.1
gene_biotype: protein_coding
description:
  Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01935
symbol: BKK55_01935
gene_biotype: protein_coding
description:
  IS200/IS605 family transposase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01950
symbol: OOF58394.1
gene_biotype: protein_coding
description:
  NADH-dependent flavin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01955
symbol: OOF58395.1
gene_biotype: protein_coding
description:
  Flavin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01960
symbol: OOF58396.1
gene_biotype: protein_coding
description:
  Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.


ensembl_gene_id: BKK55_01965
symbol: OOF58397.1
gene_biotype: protein_coding
description:
  Hemolysin regulation protein AhpA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01970
symbol: OOF58398.1
gene_biotype: protein_coding
description:
  Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01975
symbol: OOF58399.1
gene_biotype: protein_coding
description:
  YajQ family cyclic di-GMP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0234 family.


ensembl_gene_id: BKK55_01980
symbol: argH
gene_biotype: protein_coding
description:
  Argininosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_01995
symbol: rho
gene_biotype: protein_coding
description:
  AraC family transcriptional regulator; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: BKK55_02000
symbol: OOF58403.1
gene_biotype: protein_coding
description:
  Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family.


ensembl_gene_id: BKK55_02005
symbol: OOF58404.1
gene_biotype: protein_coding
description:
  Rod shape-determining protein MreC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02010
symbol: OOF58405.1
gene_biotype: protein_coding
description:
  Rod shape-determining protein; Functions in MreBCD complex in some organisms; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02015
symbol: OOF58406.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02025
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: BKK55_02030
symbol: lipB
gene_biotype: protein_coding
description:
  Octanoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: BKK55_02035
symbol: OOF58410.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0250 family.


ensembl_gene_id: BKK55_02040
symbol: OOF58411.1
gene_biotype: protein_coding
description:
  Serine-type D-Ala-D-Ala carboxypeptidase; Penicillin-binding protein 5; removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family.


ensembl_gene_id: BKK55_02045
symbol: rlpA
gene_biotype: protein_coding
description:
  Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: BKK55_02050
symbol: mrdB
gene_biotype: protein_coding
description:
  Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: BKK55_02055
symbol: mrdA
gene_biotype: protein_coding
description:
  Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.


ensembl_gene_id: BKK55_02060
symbol: rlmH
gene_biotype: protein_coding
description:
  23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: BKK55_02065
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosome silencing factor; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: BKK55_02075
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: BKK55_02080
symbol: OOF58419.1
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: BKK55_02085
symbol: dld
gene_biotype: protein_coding
description:
  D-lactate dehydrogenase; Catalyzes the oxidation of D-lactate to pyruvate. Belongs to the quinone-dependent D-lactate dehydrogenase family.


ensembl_gene_id: BKK55_02090
symbol: OOF58421.1
gene_biotype: protein_coding
description:
  UDP-glucose 4-epimerase GalE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family.


ensembl_gene_id: BKK55_02095
symbol: OOF58422.1
gene_biotype: protein_coding
description:
  AmpG family muropeptide MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02100
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: BKK55_02110
symbol: OOF58425.1
gene_biotype: protein_coding
description:
  U32 family peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02115
symbol: OOF58426.1
gene_biotype: protein_coding
description:
  Hemin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02125
symbol: OOF58428.1
gene_biotype: protein_coding
description:
  Anaerobic C4-dicarboxylate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02135
symbol: fabG
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP reductase; Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02140
symbol: OOF58431.1
gene_biotype: protein_coding
description:
  [acyl-carrier-protein] S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02145
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: BKK55_02150
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: BKK55_02155
symbol: rpmF
gene_biotype: protein_coding
description:
  50S ribosomal protein L32; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL32 family.


ensembl_gene_id: BKK55_02165
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: BKK55_02175
symbol: OOF58437.1
gene_biotype: protein_coding
description:
  Peroxide stress protein YaaA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0246 family.


ensembl_gene_id: BKK55_02180
symbol: OOF58438.1
gene_biotype: protein_coding
description:
  DNA protecting protein DprA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02185
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: BKK55_02190
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: BKK55_02195
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: BKK55_02200
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: BKK55_02205
symbol: OOF58443.1
gene_biotype: protein_coding
description:
  Superoxide dismutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02210
symbol: plsB
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate 1-O-acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GPAT/DAPAT family.


ensembl_gene_id: BKK55_02215
symbol: lexA
gene_biotype: protein_coding
description:
  Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: BKK55_02220
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: BKK55_02225
symbol: dusC
gene_biotype: protein_coding
description:
  tRNA dihydrouridine(16) synthase DusC; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs. Belongs to the Dus family. DusC subfamily.


ensembl_gene_id: BKK55_02230
symbol: djlA
gene_biotype: protein_coding
description:
  Molecular chaperone DjlA; Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB/RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host.


ensembl_gene_id: BKK55_02235
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: BKK55_02240
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: BKK55_02245
symbol: OOF58503.1
gene_biotype: protein_coding
description:
  C4-dicarboxylic acid transporter DauA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02265
symbol: folD
gene_biotype: protein_coding
description:
  Bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: BKK55_02270
symbol: OOF58452.1
gene_biotype: protein_coding
description:
  FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02280
symbol: apaH
gene_biotype: protein_coding
description:
  Bis(5'-nucleosyl)-tetraphosphatase (symmetrical); Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.


ensembl_gene_id: BKK55_02285
symbol: rsmA
gene_biotype: protein_coding
description:
  16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: BKK55_02290
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: BKK55_02300
symbol: priB
gene_biotype: protein_coding
description:
  Primosomal replication protein N; Binds single-stranded DNA at the primosome assembly site (PAS); Belongs to the PriB family.


ensembl_gene_id: BKK55_02305
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: BKK55_02315
symbol: OOF58461.1
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: BKK55_02320
symbol: plsY
gene_biotype: protein_coding
description:
  Acyl-phosphate--glycerol-3-phosphate O-acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: BKK55_02325
symbol: rpoH
gene_biotype: protein_coding
description:
  RNA polymerase factor sigma-32; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.


ensembl_gene_id: BKK55_02340
symbol: OOF58466.1
gene_biotype: protein_coding
description:
  Two-component system sensor histidine kinase NarQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02345
symbol: OOF58467.1
gene_biotype: protein_coding
description:
  MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02350
symbol: glmS
gene_biotype: protein_coding
description:
  Glutamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: BKK55_02355
symbol: OOF58469.1
gene_biotype: protein_coding
description:
  XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02360
symbol: OOF58470.1
gene_biotype: protein_coding
description:
  DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: BKK55_02370
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: BKK55_02375
symbol: nudC
gene_biotype: protein_coding
description:
  NADH pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family. NudC subfamily.


ensembl_gene_id: BKK55_02380
symbol: OOF58474.1
gene_biotype: protein_coding
description:
  Quercetin 2,3-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pirin family.


ensembl_gene_id: BKK55_02385
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: BKK55_02390
symbol: OOF58476.1
gene_biotype: protein_coding
description:
  L-fucose:H+ symporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02395
symbol: fucA
gene_biotype: protein_coding
description:
  L-fuculose phosphate aldolase; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde.


ensembl_gene_id: BKK55_02415
symbol: OOF58481.1
gene_biotype: protein_coding
description:
  DeoR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02420
symbol: glmU
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: BKK55_02430
symbol: lacY
gene_biotype: protein_coding
description:
  MFS transporter; Lactose/proton symporter; mediates lactose/proton symport through the membrane by utilizing the proton gradient to drive transport of galactosides; member of major facilitator superfamily; functions as a monomer with 12 transmembrane segments; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02435
symbol: OOF58485.1
gene_biotype: protein_coding
description:
  Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02440
symbol: OOF58486.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: BKK55_02445
symbol: OOF58487.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: BKK55_02450
symbol: aroQ
gene_biotype: protein_coding
description:
  Type II 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: BKK55_02455
symbol: menC
gene_biotype: protein_coding
description:
  O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).


ensembl_gene_id: BKK55_02460
symbol: menB
gene_biotype: protein_coding
description:
  1,4-dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA).


ensembl_gene_id: BKK55_02470
symbol: OOF58492.1
gene_biotype: protein_coding
description:
  alpha-D-phosphohexomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02475
symbol: OOF58493.1
gene_biotype: protein_coding
description:
  QacE family quaternary ammonium compound efflux SMR transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02485
symbol: OOF58504.1
gene_biotype: protein_coding
description:
  rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: BKK55_02490
symbol: pssA
gene_biotype: protein_coding
description:
  Catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02495
symbol: queA
gene_biotype: protein_coding
description:
  tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: BKK55_02500
symbol: tgt
gene_biotype: protein_coding
description:
  tRNA guanosine(34) transglycosylase Tgt; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose t [...]


ensembl_gene_id: BKK55_02510
symbol: OOF58499.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0324 family.


ensembl_gene_id: BKK55_02515
symbol: OOF58500.1
gene_biotype: protein_coding
description:
  Type IV secretion protein Rhs; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02540
symbol: OOF58272.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0263 family.


ensembl_gene_id: BKK55_02550
symbol: BKK55_02550
gene_biotype: protein_coding
description:
  Iron ABC transporter substrate-binding protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02560
symbol: ppc
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family.


ensembl_gene_id: BKK55_02565
symbol: purR
gene_biotype: protein_coding
description:
  Transcriptional repressor PurR; Is the main repressor of the genes involved in the de novo synthesis of purine nucleotides, regulating purB, purC, purEK, purF, purHD, purL, purMN and guaBA expression. PurR is allosterically activated to bind its cognate DNA by binding the purine corepressors, hypoxanthine or guanine, thereby effecting transcription repression.


ensembl_gene_id: BKK55_02570
symbol: dapD
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transferase hexapeptide repeat family.


ensembl_gene_id: BKK55_02575
symbol: OOF58278.1
gene_biotype: protein_coding
description:
  With TehA confers resistance to tellurite; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02580
symbol: OOF58279.1
gene_biotype: protein_coding
description:
  Multicopper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02585
symbol: metG
gene_biotype: protein_coding
description:
  methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: BKK55_02590
symbol: OOF58281.1
gene_biotype: protein_coding
description:
  Fe-S-binding ATPase; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: BKK55_02595
symbol: OOF58282.1
gene_biotype: protein_coding
description:
  Adenosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02605
symbol: BKK55_02605
gene_biotype: protein_coding
description:
  Antibiotic biosynthesis monooxygenase; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family.


ensembl_gene_id: BKK55_02610
symbol: OOF58284.1
gene_biotype: protein_coding
description:
  Arabinose-5-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02615
symbol: OOF58285.1
gene_biotype: protein_coding
description:
  Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.


ensembl_gene_id: BKK55_02640
symbol: BKK55_02640
gene_biotype: protein_coding
description:
  DNA (cytosine-5-)-methyltransferase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02685
symbol: OOF58295.1
gene_biotype: protein_coding
description:
  Translocation protein TolB precursor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02710
symbol: BKK55_02710
gene_biotype: protein_coding
description:
  Hypothetical protein; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02725
symbol: BKK55_02725
gene_biotype: protein_coding
description:
  Hypothetical protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02760
symbol: OOF58307.1
gene_biotype: protein_coding
description:
  DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02785
symbol: OOF58312.1
gene_biotype: protein_coding
description:
  Phage N-6-adenine-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02795
symbol: OOF58314.1
gene_biotype: protein_coding
description:
  Protein NinG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02800
symbol: OOF58315.1
gene_biotype: protein_coding
description:
  Antitermination protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02815
symbol: OOF58256.1
gene_biotype: protein_coding
description:
  Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02820
symbol: OOF58216.1
gene_biotype: protein_coding
description:
  Adenylosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.


ensembl_gene_id: BKK55_02825
symbol: hflD
gene_biotype: protein_coding
description:
  Lysogenization regulator HflD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02830
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophan--tRNA ligase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: BKK55_02840
symbol: OOF58258.1
gene_biotype: protein_coding
description:
  DUF1232 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02845
symbol: OOF58219.1
gene_biotype: protein_coding
description:
  Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02850
symbol: OOF58220.1
gene_biotype: protein_coding
description:
  Ribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RNase T2 family.


ensembl_gene_id: BKK55_02855
symbol: pgk
gene_biotype: protein_coding
description:
  Phosphoglycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphoglycerate kinase family.


ensembl_gene_id: BKK55_02860
symbol: OOF58222.1
gene_biotype: protein_coding
description:
  Class II fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.


ensembl_gene_id: BKK55_02865
symbol: OOF58223.1
gene_biotype: protein_coding
description:
  RfaL protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02875
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase I; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: BKK55_02880
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: BKK55_02885
symbol: OOF58227.1
gene_biotype: protein_coding
description:
  DNA adenine methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_02900
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family.


ensembl_gene_id: BKK55_02905
symbol: OOF58259.1
gene_biotype: protein_coding
description:
  8-oxo-dGTP diphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family.


ensembl_gene_id: BKK55_02915
symbol: lptE
gene_biotype: protein_coding
description:
  Hypothetical protein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane.


ensembl_gene_id: BKK55_02920
symbol: leuS
gene_biotype: protein_coding
description:
  leucine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: BKK55_02925
symbol: OOF58260.1
gene_biotype: protein_coding
description:
  YggU family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0235 family.


ensembl_gene_id: BKK55_02935
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: BKK55_02945
symbol: OOF58237.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BolA/IbaG family.


ensembl_gene_id: BKK55_02950
symbol: nqrA
gene_biotype: protein_coding
description:
  NADH:ubiquinone reductase (Na(+)-transporting) subunit A; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.


ensembl_gene_id: BKK55_02955
symbol: nqrB
gene_biotype: protein_coding
description:
  NADH:ubiquinone reductase (Na(+)-transporting) subunit B; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.


ensembl_gene_id: BKK55_02960
symbol: nqrC
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit C; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.


ensembl_gene_id: BKK55_02965
symbol: nqrD
gene_biotype: protein_coding
description:
  NADH:ubiquinone reductase (Na(+)-transporting) subunit D; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family.


ensembl_gene_id: BKK55_02970
symbol: nqrE
gene_biotype: protein_coding
description:
  NADH:ubiquinone reductase (Na(+)-transporting) subunit E; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family.


ensembl_gene_id: BKK55_02975
symbol: nqrF
gene_biotype: protein_coding
description:
  NADH:ubiquinone reductase (Na(+)-transporting) subunit F; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway.


ensembl_gene_id: BKK55_02980
symbol: OOF58244.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.


ensembl_gene_id: BKK55_02990
symbol: OOF58246.1
gene_biotype: protein_coding
description:
  Tautomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family.


ensembl_gene_id: BKK55_02995
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA 2-thiouridine(34) synthase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: BKK55_03000
symbol: OOF58248.1
gene_biotype: protein_coding
description:
  Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BCCT transporter (TC 2.A.15) family.


ensembl_gene_id: BKK55_03050
symbol: OOF58119.1
gene_biotype: protein_coding
description:
  Ornithine decarboxylase SpeF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03055
symbol: potE
gene_biotype: protein_coding
description:
  Putrescine-ornithine antiporter; Catalyzes both the uptake and excretion of putrescine. The uptake of putrescine is dependent on the membrane potential and the excretion involves putrescine-ornithine antiporter activity. Belongs to the amino acid-polyamine-organocation (APC) superfamily. Basic amino acid/polyamine antiporter (APA) (TC 2.A.3.2) family.


ensembl_gene_id: BKK55_03075
symbol: rbsA
gene_biotype: protein_coding
description:
  Ribose ABC transporter ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.


ensembl_gene_id: BKK55_03080
symbol: OOF58125.1
gene_biotype: protein_coding
description:
  Ribose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: BKK55_03085
symbol: OOF58126.1
gene_biotype: protein_coding
description:
  D-ribose ABC transporter substrate-binding protein RbsB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03090
symbol: rbsK
gene_biotype: protein_coding
description:
  Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.


ensembl_gene_id: BKK55_03095
symbol: OOF58128.1
gene_biotype: protein_coding
description:
  Transcriptional repressor PurR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03100
symbol: tnaA
gene_biotype: protein_coding
description:
  Tryptophanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the beta-eliminating lyase family.


ensembl_gene_id: BKK55_03105
symbol: OOF58130.1
gene_biotype: protein_coding
description:
  Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03110
symbol: OOF58131.1
gene_biotype: protein_coding
description:
  Thiol reductant ABC exporter subunit CydC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03120
symbol: OOF58133.1
gene_biotype: protein_coding
description:
  Ligand-gated channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03125
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: BKK55_03130
symbol: hisI
gene_biotype: protein_coding
description:
  Bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase; Catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; In the N-terminal section; belongs to the PRA-CH family.


ensembl_gene_id: BKK55_03135
symbol: OOF58135.1
gene_biotype: protein_coding
description:
  Peptidase S51; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S51 family.


ensembl_gene_id: BKK55_03140
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: BKK55_03145
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03150
symbol: OOF58138.1
gene_biotype: protein_coding
description:
  GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03155
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: BKK55_03165
symbol: hisB
gene_biotype: protein_coding
description:
  Bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; In the N-terminal section; belongs to the histidinol- phosphatase family.


ensembl_gene_id: BKK55_03170
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: BKK55_03180
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: BKK55_03185
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily.


ensembl_gene_id: BKK55_03195
symbol: BKK55_03195
gene_biotype: protein_coding
description:
  Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03200
symbol: OOF58011.1
gene_biotype: protein_coding
description:
  Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03215
symbol: purC
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazolesuccinocarboxamide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SAICAR synthetase family.


ensembl_gene_id: BKK55_03220
symbol: argG
gene_biotype: protein_coding
description:
  Argininosuccinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the argininosuccinate synthase family. Type 2 subfamily.


ensembl_gene_id: BKK55_03225
symbol: ribA
gene_biotype: protein_coding
description:
  GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: BKK55_03230
symbol: OOF57966.1
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03235
symbol: nagK
gene_biotype: protein_coding
description:
  N-acetylglucosamine kinase; Catalyzes the phosphorylation of N-acetyl-D-glucosamine (GlcNAc) derived from cell-wall degradation, yielding GlcNAc-6-P.


ensembl_gene_id: BKK55_03240
symbol: OOF57968.1
gene_biotype: protein_coding
description:
  Sodium:alanine symporter family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03245
symbol: OOF57969.1
gene_biotype: protein_coding
description:
  Bcr/CflA family drug resistance efflux transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03250
symbol: OOF57970.1
gene_biotype: protein_coding
description:
  16S rRNA pseudouridine(516) synthase; Catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: BKK55_03260
symbol: OOF57972.1
gene_biotype: protein_coding
description:
  NADP-dependent malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03265
symbol: cmoB
gene_biotype: protein_coding
description:
  tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs.


ensembl_gene_id: BKK55_03270
symbol: OOF57974.1
gene_biotype: protein_coding
description:
  Ribonuclease E/G; Involved in the processing of the 5'end of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03285
symbol: OOF57977.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M16 family.


ensembl_gene_id: BKK55_03290
symbol: OOF58013.1
gene_biotype: protein_coding
description:
  Hexose phosphate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03295
symbol: OOF57978.1
gene_biotype: protein_coding
description:
  Response regulator in two-component regulatory system wtih UhpB; phosphorylated UhpA is a positive activator uhpT, a hexose phosphates transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03300
symbol: OOF57979.1
gene_biotype: protein_coding
description:
  Two-component system sensor histidine kinase UhpB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03305
symbol: OOF57980.1
gene_biotype: protein_coding
description:
  Regulatory protein UhpC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03310
symbol: OOF57981.1
gene_biotype: protein_coding
description:
  Phosphatidylethanolamine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03315
symbol: OOF57982.1
gene_biotype: protein_coding
description:
  Alpha,alpha-phosphotrehalase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03320
symbol: OOF57983.1
gene_biotype: protein_coding
description:
  PTS trehalose transporter subunit IIBC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03325
symbol: OOF57984.1
gene_biotype: protein_coding
description:
  Trehalose operon repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03330
symbol: rsmC
gene_biotype: protein_coding
description:
  16S rRNA (guanine(1207)-N(2))-methyltransferase; Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle; Belongs to the methyltransferase superfamily. RsmC family.


ensembl_gene_id: BKK55_03340
symbol: OOF57987.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit psi; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown.


ensembl_gene_id: BKK55_03345
symbol: OOF57988.1
gene_biotype: protein_coding
description:
  Ribosomal-protein-alanine N-acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.


ensembl_gene_id: BKK55_03350
symbol: fdhE
gene_biotype: protein_coding
description:
  Formate dehydrogenase accessory protein FdhE; Necessary for formate dehydrogenase activity. Belongs to the FdhE family.


ensembl_gene_id: BKK55_03355
symbol: OOF57990.1
gene_biotype: protein_coding
description:
  Formate dehydrogenase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03360
symbol: OOF57991.1
gene_biotype: protein_coding
description:
  Formate dehydrogenase subunit beta; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers.


ensembl_gene_id: BKK55_03365
symbol: OOF57992.1
gene_biotype: protein_coding
description:
  Formate dehydrogenase-N subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: BKK55_03370
symbol: OOF57993.1
gene_biotype: protein_coding
description:
  Sulfate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03375
symbol: fdhD
gene_biotype: protein_coding
description:
  Sulfurtransferase FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.


ensembl_gene_id: BKK55_03385
symbol: OOF57996.1
gene_biotype: protein_coding
description:
  DNA helicase II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03390
symbol: OOF57997.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter permease; Transports peptides consisting of two or three amino acids; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03395
symbol: OOF57998.1
gene_biotype: protein_coding
description:
  Dipeptide ABC transporter permease DppC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03400
symbol: OOF57999.1
gene_biotype: protein_coding
description:
  Dipeptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: BKK55_03405
symbol: dppF
gene_biotype: protein_coding
description:
  Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03410
symbol: sotB
gene_biotype: protein_coding
description:
  Sugar transporter; Involved in the efflux of sugars. The physiological role may be the reduction of the intracellular concentration of toxic sugars or sugar metabolites; Belongs to the major facilitator superfamily. SotB (TC 2.A.1.2) family.


ensembl_gene_id: BKK55_03425
symbol: udk
gene_biotype: protein_coding
description:
  Uridine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03440
symbol: OOF58006.1
gene_biotype: protein_coding
description:
  Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03445
symbol: fbpC
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.


ensembl_gene_id: BKK55_03450
symbol: OOF58008.1
gene_biotype: protein_coding
description:
  Anaerobic ribonucleoside-triphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03455
symbol: grpE
gene_biotype: protein_coding
description:
  Nucleotide exchange factor GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds [...]


ensembl_gene_id: BKK55_03460
symbol: ppnK
gene_biotype: protein_coding
description:
  NAD(+) kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: BKK55_03480
symbol: ybeY
gene_biotype: protein_coding
description:
  rRNA maturation RNase YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: BKK55_03485
symbol: OOF57766.1
gene_biotype: protein_coding
description:
  Nucleoside triphosphate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03490
symbol: gshAB
gene_biotype: protein_coding
description:
  Bifunctional glutamate--cysteine ligase/glutathione synthetase; Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine; In the N-terminal section; belongs to the glutamate--cysteine ligase type 1 family. Type 2 subfamily.


ensembl_gene_id: BKK55_03500
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: BKK55_03505
symbol: kdsB
gene_biotype: protein_coding
description:
  3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: BKK55_03515
symbol: lpxK
gene_biotype: protein_coding
description:
  Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: BKK55_03520
symbol: msbA
gene_biotype: protein_coding
description:
  Lipid ABC transporter permease/ATP-binding protein; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.


ensembl_gene_id: BKK55_03525
symbol: OOF57773.1
gene_biotype: protein_coding
description:
  DNA internalization-related competence protein ComEC/Rec2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03530
symbol: dksA
gene_biotype: protein_coding
description:
  RNA polymerase-binding protein DksA; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression.


ensembl_gene_id: BKK55_03535
symbol: pcnB
gene_biotype: protein_coding
description:
  poly(A) polymerase; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: BKK55_03540
symbol: OOF57776.1
gene_biotype: protein_coding
description:
  2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03545
symbol: OOF57777.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0265 family.


ensembl_gene_id: BKK55_03550
symbol: serC
gene_biotype: protein_coding
description:
  Phosphoserine transaminase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.


ensembl_gene_id: BKK55_03560
symbol: tpx
gene_biotype: protein_coding
description:
  Lipid hydroperoxide peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.


ensembl_gene_id: BKK55_03565
symbol: serS
gene_biotype: protein_coding
description:
  serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: BKK55_03590
symbol: msrB
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: BKK55_03595
symbol: OOF57787.1
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03610
symbol: OOF57790.1
gene_biotype: protein_coding
description:
  RNA polymerase subunit sigma; Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: BKK55_03615
symbol: OOF57791.1
gene_biotype: protein_coding
description:
  dsDNA-mimic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03625
symbol: proA
gene_biotype: protein_coding
description:
  Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: BKK55_03635
symbol: OOF57795.1
gene_biotype: protein_coding
description:
  Catalase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the catalase family.


ensembl_gene_id: BKK55_03640
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: BKK55_03645
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: BKK55_03650
symbol: OOF57798.1
gene_biotype: protein_coding
description:
  Endopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03655
symbol: OOF57799.1
gene_biotype: protein_coding
description:
  Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03660
symbol: aceF
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: BKK55_03665
symbol: OOF57801.1
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase (acetyl-transferring), homodimeric type; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: BKK55_03685
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: BKK55_03690
symbol: OOF57806.1
gene_biotype: protein_coding
description:
  L-cystine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: BKK55_03695
symbol: modC
gene_biotype: protein_coding
description:
  Molybdenum ABC transporter ATP-binding protein; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family.


ensembl_gene_id: BKK55_03700
symbol: modB
gene_biotype: protein_coding
description:
  Molybdate ABC transporter permease; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: BKK55_03705
symbol: OOF57809.1
gene_biotype: protein_coding
description:
  Molybdate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03710
symbol: OOF57810.1
gene_biotype: protein_coding
description:
  Molybdenum-dependent transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03715
symbol: sfsA
gene_biotype: protein_coding
description:
  Sugar fermentation stimulation protein SfsA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SfsA family.


ensembl_gene_id: BKK55_03720
symbol: OOF57617.1
gene_biotype: protein_coding
description:
  Transcriptional regulator MelR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03725
symbol: OOF57618.1
gene_biotype: protein_coding
description:
  Melibiose:sodium transporter MelB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03730
symbol: OOF57619.1
gene_biotype: protein_coding
description:
  Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03735
symbol: OOF57620.1
gene_biotype: protein_coding
description:
  Redox protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: BKK55_03745
symbol: ppk
gene_biotype: protein_coding
description:
  RNA degradosome polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: BKK55_03760
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: BKK55_03765
symbol: rpmI
gene_biotype: protein_coding
description:
  50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL35 family.


ensembl_gene_id: BKK55_03770
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: BKK55_03785
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: BKK55_03790
symbol: rnfE
gene_biotype: protein_coding
description:
  Electron transport complex subunit RsxE; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: BKK55_03795
symbol: rnfG
gene_biotype: protein_coding
description:
  Electron transport complex subunit RsxG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.


ensembl_gene_id: BKK55_03800
symbol: rnfD
gene_biotype: protein_coding
description:
  Electron transport complex subunit RsxD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: BKK55_03805
symbol: rnfC
gene_biotype: protein_coding
description:
  Electron transport complex subunit RsxC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.


ensembl_gene_id: BKK55_03810
symbol: rnfB
gene_biotype: protein_coding
description:
  Electron transport complex subunit RsxB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.


ensembl_gene_id: BKK55_03815
symbol: rnfA
gene_biotype: protein_coding
description:
  Electron transport complex subunit RsxA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: BKK55_03820
symbol: OOF57637.1
gene_biotype: protein_coding
description:
  TIGR01666 family membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03825
symbol: OOF57638.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0319 family.


ensembl_gene_id: BKK55_03830
symbol: OOF57639.1
gene_biotype: protein_coding
description:
  PTS transporter subunit IICB; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03835
symbol: OOF57640.1
gene_biotype: protein_coding
description:
  Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03840
symbol: OOF57692.1
gene_biotype: protein_coding
description:
  Maltose phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: BKK55_03850
symbol: OOF57642.1
gene_biotype: protein_coding
description:
  Acylphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03855
symbol: OOF57643.1
gene_biotype: protein_coding
description:
  anhydro-N-acetylmuramic acid kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03860
symbol: OOF57644.1
gene_biotype: protein_coding
description:
  tRNA pseudouridine(65) synthase TruC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03865
symbol: OOF57645.1
gene_biotype: protein_coding
description:
  Cold shock domain protein CspD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03875
symbol: BKK55_03875
gene_biotype: protein_coding
description:
  Integrase; Frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03890
symbol: OOF57649.1
gene_biotype: protein_coding
description:
  Abortive phage infection protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03895
symbol: OOF57650.1
gene_biotype: protein_coding
description:
  DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03925
symbol: OOF57655.1
gene_biotype: protein_coding
description:
  Antirepressor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03975
symbol: OOF57693.1
gene_biotype: protein_coding
description:
  Cell filamentation protein Fic; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_03995
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: BKK55_04000
symbol: OOF57668.1
gene_biotype: protein_coding
description:
  Elongation factor P hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04005
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: BKK55_04015
symbol: prmC
gene_biotype: protein_coding
description:
  protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: BKK55_04025
symbol: kdsA
gene_biotype: protein_coding
description:
  3-deoxy-8-phosphooctulonate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the KdsA family.


ensembl_gene_id: BKK55_04030
symbol: OOF57674.1
gene_biotype: protein_coding
description:
  Glycerate dehydrogenase; Catalyzes the reduction of hydroxypyruvate to form D-glycerate, using NADH as an electron donor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: BKK55_04040
symbol: bioA
gene_biotype: protein_coding
description:
  Adenosylmethionine--8-amino-7-oxononanoate transaminase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.


ensembl_gene_id: BKK55_04045
symbol: OOF57677.1
gene_biotype: protein_coding
description:
  8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.


ensembl_gene_id: BKK55_04055
symbol: bioC
gene_biotype: protein_coding
description:
  Malonyl-[acyl-carrier protein] O-methyltransferase BioC; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway.


ensembl_gene_id: BKK55_04060
symbol: bioD
gene_biotype: protein_coding
description:
  Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: BKK55_04065
symbol: lolD
gene_biotype: protein_coding
description:
  Lipoprotein releasing system, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.


ensembl_gene_id: BKK55_04070
symbol: OOF57682.1
gene_biotype: protein_coding
description:
  Lipoprotein transporter subunit LolE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04075
symbol: OOF57683.1
gene_biotype: protein_coding
description:
  3-deoxy-7-phosphoheptulonate synthase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).


ensembl_gene_id: BKK55_04080
symbol: OOF57684.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional regulator AraC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04085
symbol: OOF57685.1
gene_biotype: protein_coding
description:
  LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04095
symbol: OOF57687.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: BKK55_04110
symbol: OOF57690.1
gene_biotype: protein_coding
description:
  Restriction endonuclease subunit R; Subunit R is required for both nuclease and ATPase activities, but not for modification.


ensembl_gene_id: BKK55_04125
symbol: OOF57455.1
gene_biotype: protein_coding
description:
  Diacylglycerol kinase; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.


ensembl_gene_id: BKK55_04130
symbol: OOF57456.1
gene_biotype: protein_coding
description:
  Quinol dehydrogenase ferredoxin subunit NapH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04135
symbol: OOF57457.1
gene_biotype: protein_coding
description:
  Ferredoxin-type protein NapG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04140
symbol: napA
gene_biotype: protein_coding
description:
  Nitrate reductase catalytic subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.


ensembl_gene_id: BKK55_04145
symbol: napD
gene_biotype: protein_coding
description:
  Nitrate reductase; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.


ensembl_gene_id: BKK55_04150
symbol: napF
gene_biotype: protein_coding
description:
  Ferredoxin-type protein NapF; Could be involved in the maturation of NapA, the catalytic subunit of the periplasmic nitrate reductase, before its export into the periplasm; Belongs to the NapF family.


ensembl_gene_id: BKK55_04165
symbol: OOF57463.1
gene_biotype: protein_coding
description:
  ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: BKK55_04175
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanosine(46)-N7)-methyltransferase TrmB; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: BKK55_04180
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: BKK55_04185
symbol: OOF57467.1
gene_biotype: protein_coding
description:
  Cell division protein FtsN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04190
symbol: OOF57468.1
gene_biotype: protein_coding
description:
  TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04195
symbol: OOF57469.1
gene_biotype: protein_coding
description:
  Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: BKK55_04200
symbol: OOF57470.1
gene_biotype: protein_coding
description:
  Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: BKK55_04205
symbol: OOF57471.1
gene_biotype: protein_coding
description:
  Deoxyribonuclease HsdR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04210
symbol: OOF57472.1
gene_biotype: protein_coding
description:
  Tryptophan transporter of high affinity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04230
symbol: OOF57474.1
gene_biotype: protein_coding
description:
  Chromosome partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04235
symbol: OOF57475.1
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: BKK55_04240
symbol: OOF57476.1
gene_biotype: protein_coding
description:
  Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04255
symbol: OOF57479.1
gene_biotype: protein_coding
description:
  Integrating conjugative element protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04275
symbol: OOF57483.1
gene_biotype: protein_coding
description:
  Single-stranded DNA-binding protein; Binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04290
symbol: OOF57485.1
gene_biotype: protein_coding
description:
  DNA topoisomerase III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04370
symbol: OOF57500.1
gene_biotype: protein_coding
description:
  Conjugative coupling factor TraD, PFGI-1 class; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04380
symbol: OOF57502.1
gene_biotype: protein_coding
description:
  Integrating conjugative element membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04420
symbol: OOF57510.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04425
symbol: OOF57511.1
gene_biotype: protein_coding
description:
  Conjugative transfer ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04440
symbol: OOF57514.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04450
symbol: OOF57534.1
gene_biotype: protein_coding
description:
  Putative toxin-antitoxin system toxin component, PIN family; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04515
symbol: OOF57527.1
gene_biotype: protein_coding
description:
  Antirestriction protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04525
symbol: OOF57529.1
gene_biotype: protein_coding
description:
  Restriction endonuclease subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04540
symbol: OOF57406.1
gene_biotype: protein_coding
description:
  Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04550
symbol: OOF57408.1
gene_biotype: protein_coding
description:
  Phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.


ensembl_gene_id: BKK55_04565
symbol: OOF57411.1
gene_biotype: protein_coding
description:
  Ribulose-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribulose-phosphate 3-epimerase family.


ensembl_gene_id: BKK55_04570
symbol: OOF57412.1
gene_biotype: protein_coding
description:
  Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.


ensembl_gene_id: BKK55_04575
symbol: lon
gene_biotype: protein_coding
description:
  Endopeptidase La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: BKK55_04580
symbol: OOF57414.1
gene_biotype: protein_coding
description:
  Aminobenzoyl-glutamate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04585
symbol: OOF57415.1
gene_biotype: protein_coding
description:
  YggW family oxidoreductase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: BKK55_04590
symbol: rpiA
gene_biotype: protein_coding
description:
  Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.


ensembl_gene_id: BKK55_04595
symbol: OOF57417.1
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: BKK55_04600
symbol: asnA
gene_biotype: protein_coding
description:
  Aspartate--ammonia ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04605
symbol: OOF57419.1
gene_biotype: protein_coding
description:
  Transcriptional regulator AsnC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04610
symbol: OOF57420.1
gene_biotype: protein_coding
description:
  Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04615
symbol: OOF57421.1
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.


ensembl_gene_id: BKK55_04640
symbol: OOF57203.1
gene_biotype: protein_coding
description:
  Galactoside ABC transporter permease MglC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: BKK55_04645
symbol: OOF57204.1
gene_biotype: protein_coding
description:
  Galactose/methyl galactoside ABC transporter ATP-binding protein MglA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04650
symbol: OOF57205.1
gene_biotype: protein_coding
description:
  Methyl-galactoside ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04655
symbol: OOF57206.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional regulator GalS; Controls transcription of galETKM; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04660
symbol: OOF57207.1
gene_biotype: protein_coding
description:
  Galactose-1-phosphate uridylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04665
symbol: galK
gene_biotype: protein_coding
description:
  Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.


ensembl_gene_id: BKK55_04675
symbol: OOF57210.1
gene_biotype: protein_coding
description:
  Magnesium/cobalt efflux protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04680
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: BKK55_04695
symbol: OOF57214.1
gene_biotype: protein_coding
description:
  Outer membrane lipid asymmetry maintenance protein MlaD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04705
symbol: OOF57216.1
gene_biotype: protein_coding
description:
  NTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04710
symbol: OOF57217.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BolA/IbaG family.


ensembl_gene_id: BKK55_04715
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: BKK55_04725
symbol: OOF57220.1
gene_biotype: protein_coding
description:
  acyl-CoA thioesterase II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04730
symbol: OOF57221.1
gene_biotype: protein_coding
description:
  Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04735
symbol: OOF57222.1
gene_biotype: protein_coding
description:
  Ktr system potassium transporter B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04750
symbol: OOF57225.1
gene_biotype: protein_coding
description:
  Azaleucine resistance protein AzlC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04755
symbol: OOF57226.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04765
symbol: OOF57228.1
gene_biotype: protein_coding
description:
  Autotransporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04775
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual componen [...]


ensembl_gene_id: BKK55_04800
symbol: OOF57233.1
gene_biotype: protein_coding
description:
  Purine permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04805
symbol: OOF57234.1
gene_biotype: protein_coding
description:
  uracil-DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04810
symbol: ychF
gene_biotype: protein_coding
description:
  Redox-regulated ATPase YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: BKK55_04815
symbol: pth
gene_biotype: protein_coding
description:
  aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: BKK55_04825
symbol: OOF57238.1
gene_biotype: protein_coding
description:
  RnfH family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0125 (RnfH) family.


ensembl_gene_id: BKK55_04830
symbol: OOF57239.1
gene_biotype: protein_coding
description:
  Ribosomal oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04835
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: BKK55_04855
symbol: OOF57243.1
gene_biotype: protein_coding
description:
  Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04860
symbol: OOF57130.1
gene_biotype: protein_coding
description:
  Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04875
symbol: OOF57027.1
gene_biotype: protein_coding
description:
  Metal ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: BKK55_04895
symbol: rlmC
gene_biotype: protein_coding
description:
  23S rRNA (uracil(747)-C(5))-methyltransferase; Catalyzes the formation of 5-methyl-uridine at position 747 (m5U747) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmC subfamily.


ensembl_gene_id: BKK55_04900
symbol: nagZ
gene_biotype: protein_coding
description:
  beta-N-acetylhexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.


ensembl_gene_id: BKK55_04910
symbol: OOF57034.1
gene_biotype: protein_coding
description:
  Histidine triad nucleotide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04920
symbol: mntP
gene_biotype: protein_coding
description:
  Hypothetical protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.


ensembl_gene_id: BKK55_04925
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: BKK55_04930
symbol: yidC
gene_biotype: protein_coding
description:
  Membrane protein insertase YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: BKK55_04935
symbol: OOF57039.1
gene_biotype: protein_coding
description:
  Membrane protein insertion efficiency factor YidD; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: BKK55_04940
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: BKK55_04945
symbol: rpmH
gene_biotype: protein_coding
description:
  50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL34 family.


ensembl_gene_id: BKK55_04950
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiation protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: BKK55_04955
symbol: OOF57043.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of  [...]


ensembl_gene_id: BKK55_04960
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication/repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: BKK55_04965
symbol: OOF57045.1
gene_biotype: protein_coding
description:
  Fe-S assembly protein IscX; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04970
symbol: OOF57046.1
gene_biotype: protein_coding
description:
  Ferredoxin, 2Fe-2S type, ISC system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_04975
symbol: hscA
gene_biotype: protein_coding
description:
  Fe-S protein assembly chaperone HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB.


ensembl_gene_id: BKK55_04985
symbol: hscB
gene_biotype: protein_coding
description:
  Fe-S protein assembly co-chaperone HscB; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family.


ensembl_gene_id: BKK55_04990
symbol: OOF57050.1
gene_biotype: protein_coding
description:
  Iron-sulfur cluster assembly protein IscA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HesB/IscA family.


ensembl_gene_id: BKK55_04995
symbol: OOF57051.1
gene_biotype: protein_coding
description:
  Fe-S cluster assembly scaffold IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.


ensembl_gene_id: BKK55_05000
symbol: iscS
gene_biotype: protein_coding
description:
  IscS subfamily cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins.


ensembl_gene_id: BKK55_05005
symbol: OOF57053.1
gene_biotype: protein_coding
description:
  Fe-S cluster assembly transcriptional regulator IscR; Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins.


ensembl_gene_id: BKK55_05010
symbol: trmJ
gene_biotype: protein_coding
description:
  tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.


ensembl_gene_id: BKK55_05025
symbol: pal
gene_biotype: protein_coding
description:
  Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: BKK55_05030
symbol: tolB
gene_biotype: protein_coding
description:
  Tol-Pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: BKK55_05035
symbol: OOF57057.1
gene_biotype: protein_coding
description:
  Protein TolA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05040
symbol: tolR
gene_biotype: protein_coding
description:
  Protein TolR; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: BKK55_05045
symbol: tolQ
gene_biotype: protein_coding
description:
  Protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: BKK55_05050
symbol: OOF57060.1
gene_biotype: protein_coding
description:
  Tol-pal system-associated acyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05055
symbol: OOF57061.1
gene_biotype: protein_coding
description:
  Cyd operon protein YbgE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05060
symbol: OOF57062.1
gene_biotype: protein_coding
description:
  Cytochrome d ubiquinol oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05065
symbol: OOF57063.1
gene_biotype: protein_coding
description:
  Cytochrome d terminal oxidase subunit 1; Part of the aerobic respiratory chain; catalyzes the ubiquinol to ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05070
symbol: OOF57064.1
gene_biotype: protein_coding
description:
  Recombinase XerD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05075
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: BKK55_05080
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: BKK55_05085
symbol: ruvC
gene_biotype: protein_coding
description:
  Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: BKK55_05095
symbol: OOF57069.1
gene_biotype: protein_coding
description:
  Dihydroneopterin triphosphate diphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05100
symbol: OOF57070.1
gene_biotype: protein_coding
description:
  Rossman fold protein, TIGR00730 family; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05110
symbol: aspS
gene_biotype: protein_coding
description:
  aspartate--tRNA ligase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: BKK55_05115
symbol: cmoA
gene_biotype: protein_coding
description:
  carboxy-S-adenosyl-L-methionine synthase CmoA; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM).


ensembl_gene_id: BKK55_05120
symbol: OOF57074.1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05125
symbol: OOF57075.1
gene_biotype: protein_coding
description:
  Lactoylglutathione lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05130
symbol: rnt
gene_biotype: protein_coding
description:
  Ribonuclease T; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis.


ensembl_gene_id: BKK55_05140
symbol: OOF57078.1
gene_biotype: protein_coding
description:
  Primosomal replication protein N; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05150
symbol: rne
gene_biotype: protein_coding
description:
  Ribonuclease E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily.


ensembl_gene_id: BKK55_05155
symbol: OOF57080.1
gene_biotype: protein_coding
description:
  23S rRNA pseudouridine(955/2504/2580) synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: BKK55_05160
symbol: hfq
gene_biotype: protein_coding
description:
  RNA chaperone Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: BKK55_05165
symbol: hflX
gene_biotype: protein_coding
description:
  GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: BKK55_05180
symbol: OOF57085.1
gene_biotype: protein_coding
description:
  Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05185
symbol: OOF57086.1
gene_biotype: protein_coding
description:
  Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: BKK55_05195
symbol: OOF57088.1
gene_biotype: protein_coding
description:
  Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05200
symbol: znuC
gene_biotype: protein_coding
description:
  Zinc ABC transporter ATP-binding protein ZnuC; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.


ensembl_gene_id: BKK55_05205
symbol: znuB
gene_biotype: protein_coding
description:
  Zinc ABC transporter permease; Involved in transport of zinc(II) with ZnuA and C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05210
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: BKK55_05215
symbol: pdxY
gene_biotype: protein_coding
description:
  Pyridoxal kinase; Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP.


ensembl_gene_id: BKK55_05220
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA lysidine(34) synthetase TilS; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: BKK55_05225
symbol: OOF57094.1
gene_biotype: protein_coding
description:
  MarC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05230
symbol: mutH
gene_biotype: protein_coding
description:
  DNA mismatch repair endonuclease MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences. It is involved in DNA mismatch repair. Belongs to the MutH family.


ensembl_gene_id: BKK55_05235
symbol: OOF57096.1
gene_biotype: protein_coding
description:
  Cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: BKK55_05250
symbol: purM
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine cyclo-ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05255
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: BKK55_05270
symbol: OOF57103.1
gene_biotype: protein_coding
description:
  Septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.


ensembl_gene_id: BKK55_05275
symbol: OOF57104.1
gene_biotype: protein_coding
description:
  acyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05285
symbol: OOF57106.1
gene_biotype: protein_coding
description:
  Lytic murein transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05290
symbol: trpR
gene_biotype: protein_coding
description:
  Trp operon repressor; This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription.


ensembl_gene_id: BKK55_05295
symbol: mtgA
gene_biotype: protein_coding
description:
  Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.


ensembl_gene_id: BKK55_05300
symbol: OOF57108.1
gene_biotype: protein_coding
description:
  PTS maltose transporter subunit IIBC; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05310
symbol: OOF57109.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: BKK55_05315
symbol: topB
gene_biotype: protein_coding
description:
  DNA topoisomerase III; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA su [...]


ensembl_gene_id: BKK55_05320
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: BKK55_05325
symbol: OOF57112.1
gene_biotype: protein_coding
description:
  YbaB/EbfC family nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: BKK55_05330
symbol: OOF57113.1
gene_biotype: protein_coding
description:
  Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05350
symbol: OOF57117.1
gene_biotype: protein_coding
description:
  Carbamate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbamate kinase family.


ensembl_gene_id: BKK55_05355
symbol: OOF57118.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: BKK55_05360
symbol: OOF57119.1
gene_biotype: protein_coding
description:
  L-serine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron-sulfur dependent L-serine dehydratase family.


ensembl_gene_id: BKK55_05365
symbol: OOF57128.1
gene_biotype: protein_coding
description:
  Serine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05370
symbol: epmA
gene_biotype: protein_coding
description:
  Elongation factor P lysine(34) lysyltransferase; With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF- P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta-lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P; Belongs to the class-II aminoacyl-tRNA synthetase family. EpmA subfamily.


ensembl_gene_id: BKK55_05375
symbol: OOF57121.1
gene_biotype: protein_coding
description:
  Fumarate reductase (quinol) flavoprotein subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05380
symbol: OOF57122.1
gene_biotype: protein_coding
description:
  Succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.


ensembl_gene_id: BKK55_05385
symbol: frdC
gene_biotype: protein_coding
description:
  Fumarate reductase subunit C; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane.


ensembl_gene_id: BKK55_05390
symbol: frdD
gene_biotype: protein_coding
description:
  Fumarate reductase subunit D; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane.


ensembl_gene_id: BKK55_05395
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: BKK55_05405
symbol: OOF57126.1
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: BKK55_05415
symbol: infB
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: BKK55_05420
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription termination/antitermination protein NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: BKK55_05425
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: BKK55_05450
symbol: OOF56879.1
gene_biotype: protein_coding
description:
  Two-component system sensor histidine kinase QseC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05455
symbol: OOF56880.1
gene_biotype: protein_coding
description:
  Response regulator in two-component regulatory system with QseC; regulates FlhCD which is the master regulator for flagella and motility genes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05465
symbol: BKK55_05465
gene_biotype: protein_coding
description:
  TIGR00156 family protein; Frameshifted; incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05470
symbol: thrS
gene_biotype: protein_coding
description:
  threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: BKK55_05475
symbol: azoR
gene_biotype: protein_coding
description:
  FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.


ensembl_gene_id: BKK55_05480
symbol: OOF56884.1
gene_biotype: protein_coding
description:
  Anthranilate synthase component I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05485
symbol: OOF56885.1
gene_biotype: protein_coding
description:
  Anthranilate synthase component II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05495
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: BKK55_05500
symbol: trpF
gene_biotype: protein_coding
description:
  Bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase; Monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TrpC family.


ensembl_gene_id: BKK55_05505
symbol: OOF56889.1
gene_biotype: protein_coding
description:
  NADP-dependent 3-hydroxy acid dehydrogenase; NADP(+)-dependent; catalyzes the formation of 3-hydroxypropionate from the toxic malonic semialdehyde, catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine; can also use 3-hydroxybutyrate, 3-hydroxy-isobutyrate, D-threonine, L-allo-threonine,D-serine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: BKK55_05510
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: BKK55_05515
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: BKK55_05520
symbol: OOF56892.1
gene_biotype: protein_coding
description:
  ClpXP protease specificity-enhancing factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05525
symbol: sspA
gene_biotype: protein_coding
description:
  Stringent starvation protein A; Transcriptional activator; required for activation of bacteriophage P1 late promoter; induced by starvation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GST superfamily.


ensembl_gene_id: BKK55_05530
symbol: OOF56796.1
gene_biotype: protein_coding
description:
  Na+/H+ antiporter NhaC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05535
symbol: OOF56797.1
gene_biotype: protein_coding
description:
  Ornithine cyclodeaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05540
symbol: OOF56823.1
gene_biotype: protein_coding
description:
  AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05545
symbol: OOF56798.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: BKK55_05550
symbol: OOF56799.1
gene_biotype: protein_coding
description:
  Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05555
symbol: OOF56800.1
gene_biotype: protein_coding
description:
  Cystathionine beta-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05560
symbol: mpl
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate. Belongs to the MurCDEF family. Mpl subfamily.


ensembl_gene_id: BKK55_05570
symbol: gltS
gene_biotype: protein_coding
description:
  Sodium/glutamate symporter; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family.


ensembl_gene_id: BKK55_05575
symbol: parC
gene_biotype: protein_coding
description:
  DNA topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.


ensembl_gene_id: BKK55_05580
symbol: parE
gene_biotype: protein_coding
description:
  DNA topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily.


ensembl_gene_id: BKK55_05585
symbol: lpxL
gene_biotype: protein_coding
description:
  Lipid A biosynthesis lauroyl acyltransferase; Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)-(lauroyl)-lipid IV(A).


ensembl_gene_id: BKK55_05590
symbol: hldE
gene_biotype: protein_coding
description:
  Bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: BKK55_05610
symbol: OOF56810.1
gene_biotype: protein_coding
description:
  ModD protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NadC/ModD family.


ensembl_gene_id: BKK55_05620
symbol: OOF56825.1
gene_biotype: protein_coding
description:
  ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: BKK55_05635
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: BKK55_05645
symbol: BKK55_05645
gene_biotype: protein_coding
description:
  MmcQ protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.


ensembl_gene_id: BKK55_05650
symbol: OOF56816.1
gene_biotype: protein_coding
description:
  Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits).


ensembl_gene_id: BKK55_05655
symbol: OOF56817.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0231 family.


ensembl_gene_id: BKK55_05660
symbol: erpA
gene_biotype: protein_coding
description:
  Iron-sulfur cluster insertion protein ErpA; Required for insertion of 4Fe-4S clusters for at least IspG.


ensembl_gene_id: BKK55_05665
symbol: map
gene_biotype: protein_coding
description:
  Type I methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: BKK55_05670
symbol: glnD
gene_biotype: protein_coding
description:
  [protein-PII] uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.


ensembl_gene_id: BKK55_05675
symbol: hemL
gene_biotype: protein_coding
description:
  Glutamate-1-semialdehyde-2,1-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05680
symbol: wecA
gene_biotype: protein_coding
description:
  Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase; Catalyzes the transfer of the GlcNAc-1-phosphate moiety from UDP-GlcNAc onto the carrier lipid undecaprenyl phosphate (C55-P), yielding GlcNAc-pyrophosphoryl-undecaprenyl (GlcNAc-PP-C55). Belongs to the glycosyltransferase 4 family. WecA subfamily.


ensembl_gene_id: BKK55_05705
symbol: BKK55_05705
gene_biotype: protein_coding
description:
  ABC transporter; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05715
symbol: OOF56624.1
gene_biotype: protein_coding
description:
  Translation initiation factor; Involved in start site selection during the initiation of translation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05720
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: BKK55_05725
symbol: lapB
gene_biotype: protein_coding
description:
  Lipopolysaccharide assembly protein LapB; Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane; Belongs to the LapB family.


ensembl_gene_id: BKK55_05730
symbol: lapA
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS). Belongs to the LapA family.


ensembl_gene_id: BKK55_05735
symbol: ihfB
gene_biotype: protein_coding
description:
  Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: BKK55_05740
symbol: OOF56629.1
gene_biotype: protein_coding
description:
  30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.


ensembl_gene_id: BKK55_05745
symbol: cmk
gene_biotype: protein_coding
description:
  Cytidylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05750
symbol: mtnN
gene_biotype: protein_coding
description:
  5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.


ensembl_gene_id: BKK55_05760
symbol: OOF56633.1
gene_biotype: protein_coding
description:
  single-stranded-DNA-specific exonuclease RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05765
symbol: OOF56634.1
gene_biotype: protein_coding
description:
  Bifunctional protein-disulfide isomerase/oxidoreductase DsbC; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.


ensembl_gene_id: BKK55_05770
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: BKK55_05775
symbol: OOF56636.1
gene_biotype: protein_coding
description:
  Transcriptional regulator ArgP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: BKK55_05780
symbol: OOF56637.1
gene_biotype: protein_coding
description:
  Lysine decarboxylase LdcC; Constitutive; catalyzes the formation of cadaverine from lysine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05785
symbol: cadB
gene_biotype: protein_coding
description:
  Antiporter protein responsible for lysine import and cadaverine export; member of the lysine-dependent acid resistance system 4 (AR4); inner membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05790
symbol: lysS
gene_biotype: protein_coding
description:
  lysine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: BKK55_05795
symbol: OOF56640.1
gene_biotype: protein_coding
description:
  Acetolactate synthase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05800
symbol: OOF56641.1
gene_biotype: protein_coding
description:
  Acetolactate synthase, large subunit, biosynthetic type; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05805
symbol: OOF56642.1
gene_biotype: protein_coding
description:
  Na+/H+ antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05810
symbol: OOF56643.1
gene_biotype: protein_coding
description:
  DNA-binding protein H-NS-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the histone-like protein H-NS family.


ensembl_gene_id: BKK55_05815
symbol: purU
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).


ensembl_gene_id: BKK55_05820
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: BKK55_05835
symbol: OOF56647.1
gene_biotype: protein_coding
description:
  Metalloprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05840
symbol: argS
gene_biotype: protein_coding
description:
  arginine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05845
symbol: OOF56649.1
gene_biotype: protein_coding
description:
  MBL fold metallo-hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05855
symbol: OOF56651.1
gene_biotype: protein_coding
description:
  L,D-transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05860
symbol: OOF56652.1
gene_biotype: protein_coding
description:
  C-terminal processing peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family.


ensembl_gene_id: BKK55_05865
symbol: proQ
gene_biotype: protein_coding
description:
  RNA chaperone ProQ; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family.


ensembl_gene_id: BKK55_05880
symbol: OOF56656.1
gene_biotype: protein_coding
description:
  Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05925
symbol: BKK55_05925
gene_biotype: protein_coding
description:
  NADH-dependent flavin oxidoreductase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: BKK55_05930
symbol: OOF56664.1
gene_biotype: protein_coding
description:
  Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flavin oxidoreductase frp family.


ensembl_gene_id: BKK55_05935
symbol: OOF56665.1
gene_biotype: protein_coding
description:
  Organic hydroperoxide resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05940
symbol: OOF56666.1
gene_biotype: protein_coding
description:
  AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05950
symbol: potA
gene_biotype: protein_coding
description:
  Peptidase T; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.


ensembl_gene_id: BKK55_05955
symbol: OOF56668.1
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter permease PotB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05960
symbol: OOF56669.1
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter permease PotC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_05980
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: BKK55_05985
symbol: OOF56574.1
gene_biotype: protein_coding
description:
  Bifunctional GTP diphosphokinase/guanosine-3',5'-bis(diphosphate) 3'-diphosphatase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: BKK55_05990
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: BKK55_06000
symbol: OOF56577.1
gene_biotype: protein_coding
description:
  Type I glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: BKK55_06005
symbol: OOF56578.1
gene_biotype: protein_coding
description:
  Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06015
symbol: BKK55_06015
gene_biotype: protein_coding
description:
  IS200/IS605 family transposase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: BKK55_06025
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: BKK55_06030
symbol: OOF56582.1
gene_biotype: protein_coding
description:
  Glycogen debranching enzyme GlgX; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: BKK55_06035
symbol: glgB
gene_biotype: protein_coding
description:
  1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: BKK55_06040
symbol: OOF56584.1
gene_biotype: protein_coding
description:
  4-alpha-glucanotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06045
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: BKK55_06050
symbol: OOF56586.1
gene_biotype: protein_coding
description:
  Uracil permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06055
symbol: OOF56587.1
gene_biotype: protein_coding
description:
  DnaA regulatory inactivator Hda; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DnaA family. HdA subfamily.


ensembl_gene_id: BKK55_06060
symbol: der
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: BKK55_06080
symbol: clpB
gene_biotype: protein_coding
description:
  ATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: BKK55_06085
symbol: OOF56426.1
gene_biotype: protein_coding
description:
  5-formyltetrahydrofolate cyclo-ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.


ensembl_gene_id: BKK55_06095
symbol: OOF56387.1
gene_biotype: protein_coding
description:
  Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: BKK55_06100
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: BKK55_06110
symbol: OOF56390.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0597 family.


ensembl_gene_id: BKK55_06120
symbol: OOF56392.1
gene_biotype: protein_coding
description:
  D-beta-hydroxybutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06125
symbol: OOF56393.1
gene_biotype: protein_coding
description:
  acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: BKK55_06130
symbol: OOF56394.1
gene_biotype: protein_coding
description:
  TIGR00366 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06135
symbol: OOF56395.1
gene_biotype: protein_coding
description:
  succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06140
symbol: OOF56396.1
gene_biotype: protein_coding
description:
  acetyl-CoA--acetoacetyl-CoA transferase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06165
symbol: OOF56401.1
gene_biotype: protein_coding
description:
  Vi polysaccharide biosynthesis protein VipA/TviB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: BKK55_06175
symbol: OOF56427.1
gene_biotype: protein_coding
description:
  N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06180
symbol: OOF56403.1
gene_biotype: protein_coding
description:
  Aminotransferase DegT; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: BKK55_06185
symbol: OOF56404.1
gene_biotype: protein_coding
description:
  RfaG protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06195
symbol: OOF56406.1
gene_biotype: protein_coding
description:
  RfbX protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06200
symbol: OOF56407.1
gene_biotype: protein_coding
description:
  Glycosyltransferase WbuB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06205
symbol: OOF56408.1
gene_biotype: protein_coding
description:
  Polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06210
symbol: OOF56409.1
gene_biotype: protein_coding
description:
  Sugar transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06215
symbol: OOF56410.1
gene_biotype: protein_coding
description:
  Carbamoyl phosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06225
symbol: OOF56412.1
gene_biotype: protein_coding
description:
  Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: BKK55_06230
symbol: OOF56428.1
gene_biotype: protein_coding
description:
  Polysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06235
symbol: OOF56413.1
gene_biotype: protein_coding
description:
  Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06240
symbol: OOF56414.1
gene_biotype: protein_coding
description:
  Polysaccharide biosynthesis protein GumC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06245
symbol: nhaA
gene_biotype: protein_coding
description:
  Na(+)/H(+) antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.


ensembl_gene_id: BKK55_06250
symbol: OOF56416.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport system II carrier protein; Component of the transport system for branched-chain amino acids.


ensembl_gene_id: BKK55_06255
symbol: rlmB
gene_biotype: protein_coding
description:
  23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB; Specifically methylates the ribose of guanosine 2251 in 23S rRNA.


ensembl_gene_id: BKK55_06260
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: BKK55_06270
symbol: OOF56420.1
gene_biotype: protein_coding
description:
  D-ribose transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06285
symbol: OOF56423.1
gene_biotype: protein_coding
description:
  Myo-inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06290
symbol: OOF56424.1
gene_biotype: protein_coding
description:
  Methylmalonate-semialdehyde dehydrogenase (acylating); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06295
symbol: OOF56425.1
gene_biotype: protein_coding
description:
  5-deoxy-glucuronate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06305
symbol: sspA-2
gene_biotype: protein_coding
description:
  Stringent starvation protein A; Transcriptional activator; required for activation of bacteriophage P1 late promoter; induced by starvation; incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06315
symbol: BKK55_06315
gene_biotype: protein_coding
description:
  Group II intron reverse transcriptase/maturase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06320
symbol: rpsI
gene_biotype: protein_coding
description:
  30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family.


ensembl_gene_id: BKK55_06325
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: BKK55_06330
symbol: OOF56314.1
gene_biotype: protein_coding
description:
  Methylenetetrahydrofolate reductase [NAD(P)H]; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: BKK55_06340
symbol: ihfA
gene_biotype: protein_coding
description:
  Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: BKK55_06345
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: BKK55_06350
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanine--tRNA ligase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: BKK55_06355
symbol: OOF56319.1
gene_biotype: protein_coding
description:
  Plastocyanin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06360
symbol: OOF56320.1
gene_biotype: protein_coding
description:
  Protease SohB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06365
symbol: asnS
gene_biotype: protein_coding
description:
  asparagine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06370
symbol: OOF56322.1
gene_biotype: protein_coding
description:
  Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.


ensembl_gene_id: BKK55_06380
symbol: OOF56324.1
gene_biotype: protein_coding
description:
  Histone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06385
symbol: OOF56325.1
gene_biotype: protein_coding
description:
  Phosphohistidine phosphatase SixA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06390
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: BKK55_06395
symbol: OOF56327.1
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: BKK55_06400
symbol: hflB
gene_biotype: protein_coding
description:
  ATP-dependent metalloprotease; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: BKK55_06405
symbol: rlmE
gene_biotype: protein_coding
description:
  23S rRNA (uridine(2552)-2'-O)-methyltransferase; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.


ensembl_gene_id: BKK55_06410
symbol: OOF56330.1
gene_biotype: protein_coding
description:
  RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06415
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: BKK55_06420
symbol: OOF56332.1
gene_biotype: protein_coding
description:
  Serine-type D-Ala-D-Ala carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06450
symbol: OOF55924.1
gene_biotype: protein_coding
description:
  D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06455
symbol: metN
gene_biotype: protein_coding
description:
  D-methionine ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: BKK55_06460
symbol: OOF55926.1
gene_biotype: protein_coding
description:
  Methionine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06465
symbol: metQ
gene_biotype: protein_coding
description:
  Methionine ABC transporter substrate-binding protein MetQ; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nlpA lipoprotein family.


ensembl_gene_id: BKK55_06470
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: BKK55_06475
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: BKK55_06480
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription termination/antitermination protein NusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: BKK55_06485
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family.


ensembl_gene_id: BKK55_06490
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: BKK55_06495
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp endopeptidase, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: BKK55_06500
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: BKK55_06505
symbol: OOF55935.1
gene_biotype: protein_coding
description:
  Peptidoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06515
symbol: hslU
gene_biotype: protein_coding
description:
  HslU--HslV peptidase ATPase subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: BKK55_06520
symbol: hslV
gene_biotype: protein_coding
description:
  HslU--HslV peptidase proteolytic subunit; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: BKK55_06525
symbol: OOF55939.1
gene_biotype: protein_coding
description:
  Recombinase RmuC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06535
symbol: recA
gene_biotype: protein_coding
description:
  Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: BKK55_06545
symbol: OOF55943.1
gene_biotype: protein_coding
description:
  Phosphate regulon sensor histidine kinase PhoR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06550
symbol: OOF55944.1
gene_biotype: protein_coding
description:
  Phosphate regulon transcriptional regulatory protein PhoB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06555
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: BKK55_06560
symbol: OOF55946.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, permease protein PstA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06565
symbol: OOF55947.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter permease subunit PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: BKK55_06570
symbol: OOF55948.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter substrate-binding protein PstS; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.


ensembl_gene_id: BKK55_06575
symbol: OOF55949.1
gene_biotype: protein_coding
description:
  Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake.


ensembl_gene_id: BKK55_06585
symbol: gpmA
gene_biotype: protein_coding
description:
  Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.


ensembl_gene_id: BKK55_06600
symbol: OOF56010.1
gene_biotype: protein_coding
description:
  DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06605
symbol: OOF55954.1
gene_biotype: protein_coding
description:
  Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06620
symbol: OOF55957.1
gene_biotype: protein_coding
description:
  Protein deglycase HchA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06635
symbol: greB
gene_biotype: protein_coding
description:
  Transcription elongation factor GreB; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length.


ensembl_gene_id: BKK55_06640
symbol: OOF55961.1
gene_biotype: protein_coding
description:
  RNA-binding transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06645
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.


ensembl_gene_id: BKK55_06650
symbol: OOF55963.1
gene_biotype: protein_coding
description:
  Aspartate ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06655
symbol: groES
gene_biotype: protein_coding
description:
  Co-chaperone GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: BKK55_06660
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: BKK55_06665
symbol: OOF55966.1
gene_biotype: protein_coding
description:
  Hypothetical protein; The crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers; function unknown; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0149 family.


ensembl_gene_id: BKK55_06670
symbol: OOF55967.1
gene_biotype: protein_coding
description:
  Xaa-Pro aminopeptidase; Exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue; substrate can be as short as a dipeptide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06675
symbol: OOF55968.1
gene_biotype: protein_coding
description:
  Universal stress protein; Required for resistance to DNA-damaging agents. Belongs to the universal stress protein A family.


ensembl_gene_id: BKK55_06680
symbol: alaS
gene_biotype: protein_coding
description:
  alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: BKK55_06685
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s).


ensembl_gene_id: BKK55_06690
symbol: OOF55971.1
gene_biotype: protein_coding
description:
  UTP--glucose-1-phosphate uridylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06695
symbol: rplQ
gene_biotype: protein_coding
description:
  50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06700
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: BKK55_06705
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: BKK55_06710
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: BKK55_06715
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: BKK55_06720
symbol: rpmJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L36; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL36 family.


ensembl_gene_id: BKK55_06725
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: BKK55_06730
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: BKK55_06735
symbol: rpmD
gene_biotype: protein_coding
description:
  50S ribosomal protein L30; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06740
symbol: rpsE
gene_biotype: protein_coding
description:
  30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: BKK55_06745
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: BKK55_06750
symbol: rplF
gene_biotype: protein_coding
description:
  50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: BKK55_06755
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: BKK55_06760
symbol: rpsN
gene_biotype: protein_coding
description:
  30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.


ensembl_gene_id: BKK55_06765
symbol: rplE
gene_biotype: protein_coding
description:
  50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: BKK55_06770
symbol: rplX
gene_biotype: protein_coding
description:
  50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: BKK55_06775
symbol: rplN
gene_biotype: protein_coding
description:
  50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: BKK55_06785
symbol: OOF55990.1
gene_biotype: protein_coding
description:
  Sulfurtransferase TusC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DsrF/TusC family.


ensembl_gene_id: BKK55_06790
symbol: OOF55991.1
gene_biotype: protein_coding
description:
  Sulfurtransferase TusD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06805
symbol: slyX
gene_biotype: protein_coding
description:
  SlyX protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SlyX family.


ensembl_gene_id: BKK55_06810
symbol: ftsP
gene_biotype: protein_coding
description:
  Cell division protein FtsQ; Cell division protein that is required for growth during stress conditions. May be involved in protecting or stabilizing the divisomal assembly under conditions of stress; Belongs to the FtsP family.


ensembl_gene_id: BKK55_06815
symbol: OOF55995.1
gene_biotype: protein_coding
description:
  1-acyl-sn-glycerol-3-phosphate acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.


ensembl_gene_id: BKK55_06820
symbol: lpxH
gene_biotype: protein_coding
description:
  UDP-2,3-diacylglucosamine diphosphatase; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: BKK55_06825
symbol: OOF55997.1
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: BKK55_06840
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.


ensembl_gene_id: BKK55_06845
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: BKK55_06850
symbol: OOF56002.1
gene_biotype: protein_coding
description:
  Lysophospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06855
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: BKK55_06860
symbol: OOF56004.1
gene_biotype: protein_coding
description:
  Adhesin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06865
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: BKK55_06880
symbol: OOF56007.1
gene_biotype: protein_coding
description:
  Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M16 family.


ensembl_gene_id: BKK55_06885
symbol: proS
gene_biotype: protein_coding
description:
  proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacy [...]


ensembl_gene_id: BKK55_06890
symbol: OOF56009.1
gene_biotype: protein_coding
description:
  ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06895
symbol: OOF56013.1
gene_biotype: protein_coding
description:
  Type III restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06905
symbol: OOF55856.1
gene_biotype: protein_coding
description:
  Selenocysteine-specific translation elongation factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06910
symbol: selA
gene_biotype: protein_coding
description:
  L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.


ensembl_gene_id: BKK55_06920
symbol: oadG
gene_biotype: protein_coding
description:
  Oxaloacetate decarboxylase gamma chain; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation.


ensembl_gene_id: BKK55_06925
symbol: OOF55859.1
gene_biotype: protein_coding
description:
  Oxaloacetate decarboxylase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06930
symbol: OOF55860.1
gene_biotype: protein_coding
description:
  Oxaloacetate decarboxylase subunit beta; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the GcdB/MmdB/OadB family.


ensembl_gene_id: BKK55_06945
symbol: OOF55862.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: BKK55_06950
symbol: OOF55863.1
gene_biotype: protein_coding
description:
  Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06965
symbol: OOF55866.1
gene_biotype: protein_coding
description:
  Acetolactate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06970
symbol: OOF55867.1
gene_biotype: protein_coding
description:
  Glutathione peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06975
symbol: OOF55868.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional regulator OxyR; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: BKK55_06980
symbol: OOF55869.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional regulator FabR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06985
symbol: OOF55870.1
gene_biotype: protein_coding
description:
  5'-nucleotidase, lipoprotein e(P4) family; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_06990
symbol: ftsB
gene_biotype: protein_coding
description:
  Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: BKK55_06995
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: BKK55_07000
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: BKK55_07005
symbol: OOF55874.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07015
symbol: BKK55_07015
gene_biotype: protein_coding
description:
  Bacteriocin; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07030
symbol: OOF55758.1
gene_biotype: protein_coding
description:
  Phage minor tail protein L; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07035
symbol: OOF55777.1
gene_biotype: protein_coding
description:
  Phage tail tape measure protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07110
symbol: OOF55772.1
gene_biotype: protein_coding
description:
  Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07125
symbol: OOF55775.1
gene_biotype: protein_coding
description:
  Muraminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07130
symbol: OOF55779.1
gene_biotype: protein_coding
description:
  Phage holin, lambda family; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07135
symbol: OOF55776.1
gene_biotype: protein_coding
description:
  HNH endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07155
symbol: moaE
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MoaE; Catalyzes the conversion of molybdopterin precursor Z into molybdopterin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07160
symbol: OOF55572.1
gene_biotype: protein_coding
description:
  Molybdopterin synthase sulfur carrier subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07165
symbol: moaC
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: BKK55_07170
symbol: moaA
gene_biotype: protein_coding
description:
  Cyclic pyranopterin phosphate synthase; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: BKK55_07175
symbol: OOF55575.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.


ensembl_gene_id: BKK55_07180
symbol: thiI
gene_biotype: protein_coding
description:
  tRNA 4-thiouridine(8) synthase ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.


ensembl_gene_id: BKK55_07185
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: BKK55_07190
symbol: OOF55578.1
gene_biotype: protein_coding
description:
  Geranyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: BKK55_07195
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: BKK55_07200
symbol: OOF55580.1
gene_biotype: protein_coding
description:
  dGTPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the dGTPase family. Type 2 subfamily.


ensembl_gene_id: BKK55_07205
symbol: OOF55581.1
gene_biotype: protein_coding
description:
  CidB/LrgB family autolysis modulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07215
symbol: OOF55583.1
gene_biotype: protein_coding
description:
  Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07220
symbol: OOF55584.1
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07235
symbol: queF
gene_biotype: protein_coding
description:
  NADPH-dependent 7-cyano-7-deazaguanine reductase QueF; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).


ensembl_gene_id: BKK55_07240
symbol: OOF55588.1
gene_biotype: protein_coding
description:
  LOG family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07245
symbol: OOF55589.1
gene_biotype: protein_coding
description:
  TonB-dependent siderophore receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07250
symbol: OOF55590.1
gene_biotype: protein_coding
description:
  Fructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07270
symbol: rbsA-2
gene_biotype: protein_coding
description:
  D-xylose ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.


ensembl_gene_id: BKK55_07275
symbol: OOF55600.1
gene_biotype: protein_coding
description:
  Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07280
symbol: acsA
gene_biotype: protein_coding
description:
  acetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: BKK55_07285
symbol: OOF55596.1
gene_biotype: protein_coding
description:
  Bifunctional chorismate mutase/prephenate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07290
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine(55) synthase TruB; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: BKK55_07295
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: BKK55_07310
symbol: BKK55_07310
gene_biotype: protein_coding
description:
  Site-specific DNA-methyltransferase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07315
symbol: OOF55534.1
gene_biotype: protein_coding
description:
  Gluconate permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07325
symbol: OOF55536.1
gene_biotype: protein_coding
description:
  Hydroxypyruvate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the hyi family.


ensembl_gene_id: BKK55_07330
symbol: OOF55537.1
gene_biotype: protein_coding
description:
  Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07350
symbol: OOF55541.1
gene_biotype: protein_coding
description:
  Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.


ensembl_gene_id: BKK55_07355
symbol: relA
gene_biotype: protein_coding
description:
  GTP diphosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: BKK55_07360
symbol: rlmD
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily.


ensembl_gene_id: BKK55_07370
symbol: OOF55545.1
gene_biotype: protein_coding
description:
  Opacity-associated protein OapB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07375
symbol: OOF55548.1
gene_biotype: protein_coding
description:
  Acetylglucosamine transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07380
symbol: OOF55546.1
gene_biotype: protein_coding
description:
  EF-P beta-lysylation protein EpmB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07385
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family.


ensembl_gene_id: BKK55_07400
symbol: BKK55_07400
gene_biotype: protein_coding
description:
  Type IV secretion protein Rhs; Incomplete; too short partial abutting assembly gap; missing start and stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: BKK55_07405
symbol: OOF55348.1
gene_biotype: protein_coding
description:
  PTS ascorbate transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07410
symbol: OOF55349.1
gene_biotype: protein_coding
description:
  Ferredoxin-type protein NapF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07415
symbol: dmsD
gene_biotype: protein_coding
description:
  DMSO reductase maturation protein DsmD; Required for biogenesis/assembly of DMSO reductase, but not for the interaction of the DmsA signal peptide with the Tat system. May be part of a chaperone cascade complex that facilitates a folding- maturation pathway for the substrate protein.


ensembl_gene_id: BKK55_07420
symbol: OOF55351.1
gene_biotype: protein_coding
description:
  Dimethyl sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07425
symbol: OOF55352.1
gene_biotype: protein_coding
description:
  Dimethylsulfoxide reductase, chain B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07430
symbol: OOF55353.1
gene_biotype: protein_coding
description:
  Dimethyl sulfoxide reductase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: BKK55_07445
symbol: OOF55356.1
gene_biotype: protein_coding
description:
  Phosphonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07460
symbol: OOF55284.1
gene_biotype: protein_coding
description:
  C-type cytochrome biogenesis protein CcmI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07470
symbol: OOF55286.1
gene_biotype: protein_coding
description:
  Thiol:disulfide interchange protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07475
symbol: OOF55287.1
gene_biotype: protein_coding
description:
  Cytochrome c-type biogenesis protein; required for the transfer of heme to apocytochrome c; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07480
symbol: ccmE
gene_biotype: protein_coding
description:
  Cytochrome c biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.


ensembl_gene_id: BKK55_07485
symbol: OOF55289.1
gene_biotype: protein_coding
description:
  Heme exporter protein CcmD; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family.


ensembl_gene_id: BKK55_07490
symbol: ccmC
gene_biotype: protein_coding
description:
  Heme ABC transporter permease; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.


ensembl_gene_id: BKK55_07495
symbol: OOF55291.1
gene_biotype: protein_coding
description:
  Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family.


ensembl_gene_id: BKK55_07500
symbol: ccmA
gene_biotype: protein_coding
description:
  Heme ABC transporter ATP-binding protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.


ensembl_gene_id: BKK55_07505
symbol: OOF55293.1
gene_biotype: protein_coding
description:
  Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: BKK55_07515
symbol: BKK55_07515
gene_biotype: protein_coding
description:
  Isoprenylcysteine carboxyl methyltransferase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07520
symbol: hisS
gene_biotype: protein_coding
description:
  histidine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07525
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: BKK55_07535
symbol: OOF55297.1
gene_biotype: protein_coding
description:
  Type IV pilus biogenesis/stability protein PilW; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07540
symbol: rlmN
gene_biotype: protein_coding
description:
  Dual-specificity RNA methyltransferase RlmN; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: BKK55_07550
symbol: OOF55300.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine endopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family.


ensembl_gene_id: BKK55_07555
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: BKK55_07560
symbol: rpmC
gene_biotype: protein_coding
description:
  50S ribosomal protein L29; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL29 family.


ensembl_gene_id: BKK55_07565
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: BKK55_07570
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: BKK55_07575
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: BKK55_07580
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: BKK55_07585
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: BKK55_07590
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: BKK55_07600
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.


ensembl_gene_id: BKK55_07605
symbol: rpsJ
gene_biotype: protein_coding
description:
  30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: BKK55_07610
symbol: OOF55244.1
gene_biotype: protein_coding
description:
  Autoinducer-2 kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07615
symbol: OOF55245.1
gene_biotype: protein_coding
description:
  Transcriptional regulator LsrR; Regulates the transcription of lsr genes; involved in autoinducer 2 uptake, biofilm formation and stress responses; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07620
symbol: OOF55246.1
gene_biotype: protein_coding
description:
  Autoinducer 2 ABC transporter ATP-binding protein LsrA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07625
symbol: OOF55247.1
gene_biotype: protein_coding
description:
  Autoinducer 2 ABC transporter permease LsrC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: BKK55_07630
symbol: OOF55248.1
gene_biotype: protein_coding
description:
  With IsrABC is involved with autoinducer 2 import; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: BKK55_07635
symbol: OOF55249.1
gene_biotype: protein_coding
description:
  Autoinducer 2 ABC transporter substrate-binding protein; With lsrACD is involved in the transport of autoinducer 2 into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07640
symbol: OOF55250.1
gene_biotype: protein_coding
description:
  Involved in autoinducer 2 transport and processing; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07645
symbol: OOF55251.1
gene_biotype: protein_coding
description:
  Autoinducer-2 (AI-2) modifying protein LsrG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07650
symbol: OOF55252.1
gene_biotype: protein_coding
description:
  Ribulose phosphate epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07655
symbol: OOF55253.1
gene_biotype: protein_coding
description:
  Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: BKK55_07660
symbol: ftsE
gene_biotype: protein_coding
description:
  Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: BKK55_07665
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.


ensembl_gene_id: BKK55_07670
symbol: OOF55256.1
gene_biotype: protein_coding
description:
  16S rRNA (guanine(966)-N(2))-methyltransferase RsmD; Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle; Belongs to the methyltransferase superfamily. RsmD family.


ensembl_gene_id: BKK55_07675
symbol: trmL
gene_biotype: protein_coding
description:
  tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.


ensembl_gene_id: BKK55_07680
symbol: xylB
gene_biotype: protein_coding
description:
  Xylulokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07685
symbol: xylA
gene_biotype: protein_coding
description:
  Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the xylose isomerase family.


ensembl_gene_id: BKK55_07690
symbol: OOF55260.1
gene_biotype: protein_coding
description:
  D-xylose ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07695
symbol: xylG
gene_biotype: protein_coding
description:
  Xylose ABC transporter ATP-binding protein; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.


ensembl_gene_id: BKK55_07705
symbol: OOF55263.1
gene_biotype: protein_coding
description:
  XylR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07715
symbol: OOF55265.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional repressor DeoR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07720
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: BKK55_07735
symbol: OOF55269.1
gene_biotype: protein_coding
description:
  DUF4432 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07740
symbol: ribB
gene_biotype: protein_coding
description:
  3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.


ensembl_gene_id: BKK55_07750
symbol: BKK55_07750
gene_biotype: protein_coding
description:
  Metallophos domain-containing protein; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07770
symbol: rep
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase Rep; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction.


ensembl_gene_id: BKK55_07780
symbol: coaD
gene_biotype: protein_coding
description:
  Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: BKK55_07785
symbol: OOF55274.1
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonic acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: BKK55_07795
symbol: tpiA
gene_biotype: protein_coding
description:
  Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: BKK55_07805
symbol: xerC
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: BKK55_07810
symbol: OOF55121.1
gene_biotype: protein_coding
description:
  Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TorC/TorY family.


ensembl_gene_id: BKK55_07815
symbol: OOF55122.1
gene_biotype: protein_coding
description:
  Catalyzes the reduction of trimethylamine-N-oxide to form trimethylamine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: BKK55_07825
symbol: OOF55124.1
gene_biotype: protein_coding
description:
  L-ribulose-5-phosphate 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07830
symbol: OOF55125.1
gene_biotype: protein_coding
description:
  L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated; may be involved in the utilization of 2,3-diketo-L-gulonate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07840
symbol: OOF55127.1
gene_biotype: protein_coding
description:
  L-ascorbate 6-phosphate lactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07845
symbol: OOF55128.1
gene_biotype: protein_coding
description:
  PTS ascorbate-specific subunit IIBC; Functions with enzymes IIB and IIC, enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07850
symbol: OOF55129.1
gene_biotype: protein_coding
description:
  PTS ascorbate-specific transporter subunit IIA; Involved in the phosphorylation and transport of sugars across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07855
symbol: ulaD
gene_biotype: protein_coding
description:
  Catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate in anaerobic L-ascorbate utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07860
symbol: OOF55131.1
gene_biotype: protein_coding
description:
  Protein TldD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07865
symbol: rsmI
gene_biotype: protein_coding
description:
  16S rRNA (cytidine(1402)-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: BKK55_07870
symbol: lpoA
gene_biotype: protein_coding
description:
  Penicillin-binding protein activator; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1A (PBP1a). Belongs to the LpoA family.


ensembl_gene_id: BKK55_07875
symbol: OOF55134.1
gene_biotype: protein_coding
description:
  YraN family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0102 family.


ensembl_gene_id: BKK55_07880
symbol: OOF55135.1
gene_biotype: protein_coding
description:
  SIS domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07885
symbol: OOF55136.1
gene_biotype: protein_coding
description:
  Osmotically-inducible protein OsmY; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07890
symbol: OOF55137.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: BKK55_07895
symbol: OOF55138.1
gene_biotype: protein_coding
description:
  Ribonucleotide-diphosphate reductase subunit beta; B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07915
symbol: OOF55141.1
gene_biotype: protein_coding
description:
  NADPH quinone reductase MdaB; Involved in drug resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07930
symbol: OOF55087.1
gene_biotype: protein_coding
description:
  NAD(P)H oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07940
symbol: OOF55089.1
gene_biotype: protein_coding
description:
  Paraslipin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07945
symbol: sstT
gene_biotype: protein_coding
description:
  Serine/threonine transporter SstT; Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system). Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: BKK55_07950
symbol: OOF55118.1
gene_biotype: protein_coding
description:
  Type VI secretion protein ImpA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_07960
symbol: OOF55092.1
gene_biotype: protein_coding
description:
  Aspartate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartate/glutamate racemases family.


ensembl_gene_id: BKK55_07970
symbol: lpxM
gene_biotype: protein_coding
description:
  Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Catalyzes the transfer of myristate from myristoyl-acyl carrier protein (ACP) to Kdo(2)-(lauroyl)-lipid IV(A) to form Kdo(2)- lipid A.


ensembl_gene_id: BKK55_07980
symbol: OOF55096.1
gene_biotype: protein_coding
description:
  Penicillin-insensitive murein endopeptidase; Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus.


ensembl_gene_id: BKK55_07985
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: BKK55_07995
symbol: OOF55099.1
gene_biotype: protein_coding
description:
  o-succinylbenzoate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08000
symbol: seqA
gene_biotype: protein_coding
description:
  Replication initiation regulator SeqA; Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated.


ensembl_gene_id: BKK55_08010
symbol: OOF55102.1
gene_biotype: protein_coding
description:
  Flavodoxin; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family.


ensembl_gene_id: BKK55_08015
symbol: fur
gene_biotype: protein_coding
description:
  Transcriptional repressor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family.


ensembl_gene_id: BKK55_08040
symbol: OOF55108.1
gene_biotype: protein_coding
description:
  Beta-ketoacyl-[acyl-carrier-protein] synthase I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: BKK55_08045
symbol: mnmC
gene_biotype: protein_coding
description:
  tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.


ensembl_gene_id: BKK55_08065
symbol: OOF55113.1
gene_biotype: protein_coding
description:
  L-arabinose ABC transporter permease AraH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: BKK55_08070
symbol: araG
gene_biotype: protein_coding
description:
  L-arabinose ABC transporter ATP-binding protein AraG; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family.


ensembl_gene_id: BKK55_08075
symbol: OOF55115.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter substrate-binding protein; With AraGH is involved in the transport of arabinose into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08080
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: BKK55_08085
symbol: tmcA
gene_biotype: protein_coding
description:
  tRNA(Met) cytidine acetyltransferase; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP).


ensembl_gene_id: BKK55_08090
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: BKK55_08095
symbol: cysQ
gene_biotype: protein_coding
description:
  3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.


ensembl_gene_id: BKK55_08105
symbol: OOF54867.1
gene_biotype: protein_coding
description:
  Oligopeptide transporter, OPT family; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08110
symbol: OOF54868.1
gene_biotype: protein_coding
description:
  ADP compounds hydrolase NudE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family.


ensembl_gene_id: BKK55_08115
symbol: OOF54869.1
gene_biotype: protein_coding
description:
  Heat-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HSP15 family.


ensembl_gene_id: BKK55_08120
symbol: OOF54870.1
gene_biotype: protein_coding
description:
  Dialkylrecorsinol condensing enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08135
symbol: OOF54872.1
gene_biotype: protein_coding
description:
  Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08165
symbol: OOF54877.1
gene_biotype: protein_coding
description:
  Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08170
symbol: OOF54878.1
gene_biotype: protein_coding
description:
  Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: BKK55_08180
symbol: OOF54880.1
gene_biotype: protein_coding
description:
  beta-ketoacyl-ACP synthase II; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: BKK55_08185
symbol: OOF54881.1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08190
symbol: OOF54882.1
gene_biotype: protein_coding
description:
  Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08195
symbol: OOF54883.1
gene_biotype: protein_coding
description:
  Beta-ketoacyl-[acyl-carrier-protein] synthase II; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: BKK55_08215
symbol: OOF54929.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: BKK55_08220
symbol: OOF54886.1
gene_biotype: protein_coding
description:
  Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08225
symbol: OOF54887.1
gene_biotype: protein_coding
description:
  Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08230
symbol: OOF54888.1
gene_biotype: protein_coding
description:
  Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08235
symbol: OOF54889.1
gene_biotype: protein_coding
description:
  AMP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08260
symbol: OOF54893.1
gene_biotype: protein_coding
description:
  1-acyl-sn-glycerol-3-phosphate acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08275
symbol: OOF54896.1
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08280
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: BKK55_08285
symbol: cyaY
gene_biotype: protein_coding
description:
  Iron donor protein CyaY; Involved in iron-sulfur (Fe-S) cluster assembly. May act as a regulator of Fe-S biogenesis.


ensembl_gene_id: BKK55_08290
symbol: OOF54899.1
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08295
symbol: OOF54900.1
gene_biotype: protein_coding
description:
  Sn-glycerol-3-phosphate dehydrogenase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08300
symbol: glpB
gene_biotype: protein_coding
description:
  Anaerobic glycerol-3-phosphate dehydrogenase subunit B; Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor.


ensembl_gene_id: BKK55_08305
symbol: OOF54902.1
gene_biotype: protein_coding
description:
  Sn-glycerol-3-phosphate dehydrogenase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: BKK55_08320
symbol: OOF54905.1
gene_biotype: protein_coding
description:
  Aquaporin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MIP/aquaporin (TC 1.A.8) family.


ensembl_gene_id: BKK55_08325
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.


ensembl_gene_id: BKK55_08330
symbol: engB
gene_biotype: protein_coding
description:
  YihA family ribosome biogenesis GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: BKK55_08335
symbol: OOF54908.1
gene_biotype: protein_coding
description:
  Among the AAA+ ATPases, the YifB protease family belongs to the Helix 2 insert clade; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08340
symbol: nfuA
gene_biotype: protein_coding
description:
  Fe-S biogenesis protein NfuA; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.


ensembl_gene_id: BKK55_08345
symbol: OOF54910.1
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08350
symbol: OOF54911.1
gene_biotype: protein_coding
description:
  Secretin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08370
symbol: OOF54915.1
gene_biotype: protein_coding
description:
  Competence protein ComA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08375
symbol: OOF54916.1
gene_biotype: protein_coding
description:
  Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08380
symbol: rlmJ
gene_biotype: protein_coding
description:
  23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ; Specifically methylates the adenine in position 2030 of 23S rRNA.


ensembl_gene_id: BKK55_08385
symbol: hslO
gene_biotype: protein_coding
description:
  Hsp33 family molecular chaperone; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.


ensembl_gene_id: BKK55_08395
symbol: OOF54920.1
gene_biotype: protein_coding
description:
  Lipopolysaccharide heptosyltransferase 1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08400
symbol: OOF54921.1
gene_biotype: protein_coding
description:
  Lipopolysaccharide heptosyltransferase II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08405
symbol: hldD
gene_biotype: protein_coding
description:
  ADP-glyceromanno-heptose 6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily.


ensembl_gene_id: BKK55_08410
symbol: OOF54923.1
gene_biotype: protein_coding
description:
  Protein disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08420
symbol: OOF54925.1
gene_biotype: protein_coding
description:
  Nucleoside triphosphate pyrophosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08440
symbol: OOF54842.1
gene_biotype: protein_coding
description:
  TIGR00153 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08445
symbol: OOF54843.1
gene_biotype: protein_coding
description:
  Phosphate permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08455
symbol: cca
gene_biotype: protein_coding
description:
  2',3'-cyclic phosphodiesterase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases.


ensembl_gene_id: BKK55_08460
symbol: lolB
gene_biotype: protein_coding
description:
  Lipoprotein localization factor LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.


ensembl_gene_id: BKK55_08465
symbol: ispE
gene_biotype: protein_coding
description:
  4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: BKK55_08470
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: BKK55_08495
symbol: OOF54852.1
gene_biotype: protein_coding
description:
  Iron permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08500
symbol: OOF54853.1
gene_biotype: protein_coding
description:
  Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08525
symbol: OOF54858.1
gene_biotype: protein_coding
description:
  Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08530
symbol: OOF54859.1
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein CcsB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08535
symbol: OOF54860.1
gene_biotype: protein_coding
description:
  Lipoprotein HlpB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08540
symbol: OOF54861.1
gene_biotype: protein_coding
description:
  Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08555
symbol: OOF54718.1
gene_biotype: protein_coding
description:
  Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.


ensembl_gene_id: BKK55_08560
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: BKK55_08575
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: BKK55_08580
symbol: tatA
gene_biotype: protein_coding
description:
  Sec-independent protein translocase TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: BKK55_08585
symbol: tatB
gene_biotype: protein_coding
description:
  Twin arginine-targeting protein translocase TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.


ensembl_gene_id: BKK55_08590
symbol: tatC
gene_biotype: protein_coding
description:
  Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: BKK55_08595
symbol: OOF54726.1
gene_biotype: protein_coding
description:
  Delta-aminolevulinic acid dehydratase; Catalyzes the formation of porphobilinogen from 5-aminolevulinate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ALAD family.


ensembl_gene_id: BKK55_08600
symbol: OOF54727.1
gene_biotype: protein_coding
description:
  Glutamate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: BKK55_08605
symbol: rpsP
gene_biotype: protein_coding
description:
  30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family.


ensembl_gene_id: BKK55_08610
symbol: rimM
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: BKK55_08615
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanosine(37)-N1)-methyltransferase TrmD; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: BKK55_08620
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: BKK55_08625
symbol: OOF54732.1
gene_biotype: protein_coding
description:
  Formate transporter FocA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08630
symbol: OOF54733.1
gene_biotype: protein_coding
description:
  Formate C-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08635
symbol: pflA
gene_biotype: protein_coding
description:
  Pyruvate formate lyase-activating protein; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.


ensembl_gene_id: BKK55_08640
symbol: OOF54735.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Acts as a multifunctional adhesin involved in direct interactions with host epithelial cells and host proteins.


ensembl_gene_id: BKK55_08645
symbol: OOF54736.1
gene_biotype: protein_coding
description:
  Competence protein ComE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08650
symbol: OOF54741.1
gene_biotype: protein_coding
description:
  Helical backbone metal receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08660
symbol: OOF54738.1
gene_biotype: protein_coding
description:
  Branched-chain alpha-keto acid dehydrogenase subunit E2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: BKK55_08665
symbol: OOF54739.1
gene_biotype: protein_coding
description:
  Heme ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08680
symbol: pyrR
gene_biotype: protein_coding
description:
  Bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.


ensembl_gene_id: BKK55_08685
symbol: atpC
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: BKK55_08690
symbol: atpD
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: BKK55_08695
symbol: atpG
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: BKK55_08700
symbol: atpA
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: BKK55_08705
symbol: atpH
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: BKK55_08710
symbol: atpF
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: BKK55_08715
symbol: atpE
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: BKK55_08720
symbol: atpB
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: BKK55_08725
symbol: OOF54626.1
gene_biotype: protein_coding
description:
  ATP F0F1 synthase subunit I; Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08730
symbol: rsmG
gene_biotype: protein_coding
description:
  16S rRNA (guanine(527)-N(7))-methyltransferase RsmG; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.


ensembl_gene_id: BKK55_08740
symbol: OOF54629.1
gene_biotype: protein_coding
description:
  NAD(P)-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08745
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: BKK55_08750
symbol: OOF54631.1
gene_biotype: protein_coding
description:
  FMN-binding protein MioC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08755
symbol: zapB
gene_biotype: protein_coding
description:
  Cell division protein ZapB; Non-essential, abundant cell division factor that is required for proper Z-ring formation. It is recruited early to the divisome by direct interaction with FtsZ, stimulating Z-ring assembly and thereby promoting cell division earlier in the cell cycle. Its recruitment to the Z-ring requires functional FtsA or ZipA.


ensembl_gene_id: BKK55_08760
symbol: OOF54633.1
gene_biotype: protein_coding
description:
  Fructose-bisphosphatase, class II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08765
symbol: OOF54634.1
gene_biotype: protein_coding
description:
  Gamma-glutamyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08770
symbol: OOF54635.1
gene_biotype: protein_coding
description:
  Universal stress protein UspA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08780
symbol: OOF54637.1
gene_biotype: protein_coding
description:
  C4-dicarboxylate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08805
symbol: OOF54574.1
gene_biotype: protein_coding
description:
  ClpV1 family T6SS ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpA/ClpB family.


ensembl_gene_id: BKK55_08810
symbol: OOF54575.1
gene_biotype: protein_coding
description:
  PTS glucose transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08815
symbol: OOF54576.1
gene_biotype: protein_coding
description:
  Bifunctional tRNA pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase RluA; Catalyzes the synthesis of pseudouridine from uracil-746 in 23S ribosomal RNA and from uracil-32 in the anticodon stem and loop of transfer RNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08820
symbol: rapA
gene_biotype: protein_coding
description:
  RNA polymerase-binding ATPase; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily.


ensembl_gene_id: BKK55_08825
symbol: OOF54578.1
gene_biotype: protein_coding
description:
  Nicotinamide riboside transporter pnuC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08830
symbol: OOF54579.1
gene_biotype: protein_coding
description:
  tRNA (adenosine(37)-N6)-methyltransferase TrmM; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC).


ensembl_gene_id: BKK55_08835
symbol: srmB
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase SrmB; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit at low temperature. Exhibits RNA-stimulated ATP hydrolysis and RNA unwinding activity; Belongs to the DEAD box helicase family. SrmB subfamily.


ensembl_gene_id: BKK55_08845
symbol: murJ
gene_biotype: protein_coding
description:
  Murein biosynthesis integral membrane protein MurJ; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: BKK55_08850
symbol: OOF54583.1
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibF; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribF family.


ensembl_gene_id: BKK55_08855
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: BKK55_08860
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: BKK55_08865
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: BKK55_08870
symbol: OOF54587.1
gene_biotype: protein_coding
description:
  Cobalamin receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08875
symbol: glyQ
gene_biotype: protein_coding
description:
  glycine--tRNA ligase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08880
symbol: OOF54589.1
gene_biotype: protein_coding
description:
  FABP family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08890
symbol: glyS
gene_biotype: protein_coding
description:
  glycine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08900
symbol: OOF54591.1
gene_biotype: protein_coding
description:
  Preprotein translocase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.


ensembl_gene_id: BKK55_08930
symbol: rnd
gene_biotype: protein_coding
description:
  Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family.


ensembl_gene_id: BKK55_08935
symbol: OOF54447.1
gene_biotype: protein_coding
description:
  Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.


ensembl_gene_id: BKK55_08940
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: BKK55_08950
symbol: OOF54450.1
gene_biotype: protein_coding
description:
  Colicin V synthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08955
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: BKK55_08960
symbol: OOF54452.1
gene_biotype: protein_coding
description:
  Branched chain amino acid aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08965
symbol: OOF54453.1
gene_biotype: protein_coding
description:
  Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: BKK55_08970
symbol: rlmM
gene_biotype: protein_coding
description:
  23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM; Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily.


ensembl_gene_id: BKK55_08980
symbol: OOF54455.1
gene_biotype: protein_coding
description:
  Murein transglycosylase A; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division.


ensembl_gene_id: BKK55_08985
symbol: OOF54456.1
gene_biotype: protein_coding
description:
  tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA; Accepts sulfur from CsdA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08990
symbol: OOF54457.1
gene_biotype: protein_coding
description:
  Zinc ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_08995
symbol: rlmL
gene_biotype: protein_coding
description:
  23S rRNA (guanine(2445)-N(2))/(guanine(2069)-N(7))- methyltransferase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family.


ensembl_gene_id: BKK55_09000
symbol: OOF54459.1
gene_biotype: protein_coding
description:
  Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09010
symbol: OOF54460.1
gene_biotype: protein_coding
description:
  Aminodeoxychorismate synthase component I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09020
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: BKK55_09025
symbol: sprT
gene_biotype: protein_coding
description:
  SprT family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SprT family.


ensembl_gene_id: BKK55_09030
symbol: OOF54463.1
gene_biotype: protein_coding
description:
  Protein opa; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09040
symbol: OOF54465.1
gene_biotype: protein_coding
description:
  Arsenate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ArsC family.


ensembl_gene_id: BKK55_09045
symbol: dapE
gene_biotype: protein_coding
description:
  Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.


ensembl_gene_id: BKK55_09050
symbol: OOF54467.1
gene_biotype: protein_coding
description:
  Peptidase M15; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09060
symbol: OOF54469.1
gene_biotype: protein_coding
description:
  PTS IIA-like nitrogen-regulatory protein PtsN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09065
symbol: OOF54470.1
gene_biotype: protein_coding
description:
  LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09070
symbol: lptA
gene_biotype: protein_coding
description:
  Lipopolysaccharide transport periplasmic protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm.


ensembl_gene_id: BKK55_09075
symbol: lptC
gene_biotype: protein_coding
description:
  LPS export ABC transporter periplasmic protein LptC; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA. Belongs to the LptC family.


ensembl_gene_id: BKK55_09080
symbol: OOF54473.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0307 family.


ensembl_gene_id: BKK55_09085
symbol: OOF54474.1
gene_biotype: protein_coding
description:
  Metalloprotease PmbA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09090
symbol: OOF54475.1
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: BKK55_09105
symbol: OOF54478.1
gene_biotype: protein_coding
description:
  Molybdopterin-synthase adenylyltransferase MoeB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09110
symbol: OOF54479.1
gene_biotype: protein_coding
description:
  Molybdopterin molybdenumtransferase MoeA; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: BKK55_09115
symbol: folE
gene_biotype: protein_coding
description:
  GTP cyclohydrolase I FolE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09150
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: BKK55_09155
symbol: gloB
gene_biotype: protein_coding
description:
  Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.


ensembl_gene_id: BKK55_09160
symbol: OOF54485.1
gene_biotype: protein_coding
description:
  SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09165
symbol: OOF54486.1
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase accessory factor YcaO; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09170
symbol: OOF54487.1
gene_biotype: protein_coding
description:
  Phosphoethanolamine transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09180
symbol: dlgD
gene_biotype: protein_coding
description:
  3-dehydro-L-gulonate 2-dehydrogenase; Catalyzes the reduction of 2,3-diketo-L-gulonate in the presence of NADH, to form 3-keto-L-gulonate.


ensembl_gene_id: BKK55_09205
symbol: OOF54494.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09210
symbol: OOF54495.1
gene_biotype: protein_coding
description:
  ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: BKK55_09220
symbol: OOF54497.1
gene_biotype: protein_coding
description:
  Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09225
symbol: OOF54498.1
gene_biotype: protein_coding
description:
  Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FGGY kinase family.


ensembl_gene_id: BKK55_09250
symbol: OOF54508.1
gene_biotype: protein_coding
description:
  4'-phosphopantetheinyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the P-Pant transferase superfamily.


ensembl_gene_id: BKK55_09255
symbol: OOF54501.1
gene_biotype: protein_coding
description:
  Threonine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09265
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: BKK55_09270
symbol: OOF54504.1
gene_biotype: protein_coding
description:
  Bifunctional aspartate kinase/homoserine dehydrogenase I; Derived by automated computational analysis using gene prediction method: Protein Homology; In the C-terminal section; belongs to the homoserine dehydrogenase family.


ensembl_gene_id: BKK55_09275
symbol: OOF54505.1
gene_biotype: protein_coding
description:
  YggS family pyridoxal phosphate enzyme; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: BKK55_09290
symbol: BKK55_09290
gene_biotype: protein_coding
description:
  Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the major facilitator superfamily.


ensembl_gene_id: BKK55_09295
symbol: OOF54429.1
gene_biotype: protein_coding
description:
  Molybdopterin-guanine dinucleotide biosynthesis protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09315
symbol: trmA
gene_biotype: protein_coding
description:
  tRNA (uridine(54)-C5)-methyltransferase TrmA; Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA).


ensembl_gene_id: BKK55_09335
symbol: OOF54442.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor guanylyltransferase MobA; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.


ensembl_gene_id: BKK55_09340
symbol: OOF54436.1
gene_biotype: protein_coding
description:
  Rhomboid family intramembrane serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09345
symbol: OOF54437.1
gene_biotype: protein_coding
description:
  DeoR/GlpR family transcriptional regulator; Represses the glpD, glpFK, glpTQ, and glpACB operons involved in glycerol-3-phosphate metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09350
symbol: dusA
gene_biotype: protein_coding
description:
  tRNA dihydrouridine(20/20a) synthase DusA; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily.


ensembl_gene_id: BKK55_09355
symbol: rpsL
gene_biotype: protein_coding
description:
  30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: BKK55_09360
symbol: rpsG
gene_biotype: protein_coding
description:
  30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: BKK55_09365
symbol: fusA
gene_biotype: protein_coding
description:
  Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]


ensembl_gene_id: BKK55_09375
symbol: OOF54279.1
gene_biotype: protein_coding
description:
  Anaerobic ribonucleotide reductase-activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.


ensembl_gene_id: BKK55_09385
symbol: OOF54280.1
gene_biotype: protein_coding
description:
  In Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09390
symbol: OOF54281.1
gene_biotype: protein_coding
description:
  Thiol reductant ABC exporter subunit CydD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09395
symbol: OOF54282.1
gene_biotype: protein_coding
description:
  Thioredoxin-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09400
symbol: OOF54283.1
gene_biotype: protein_coding
description:
  Co-chaperone YbbN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09410
symbol: idnK
gene_biotype: protein_coding
description:
  Gluconate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09425
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: BKK55_09430
symbol: OOF54289.1
gene_biotype: protein_coding
description:
  Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09440
symbol: OOF54291.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.


ensembl_gene_id: BKK55_09445
symbol: OOF54292.1
gene_biotype: protein_coding
description:
  LemA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09455
symbol: OOF54294.1
gene_biotype: protein_coding
description:
  Methanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09460
symbol: OOF54295.1
gene_biotype: protein_coding
description:
  Monothiol glutaredoxin, Grx4 family; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutaredoxin family. Monothiol subfamily.


ensembl_gene_id: BKK55_09465
symbol: OOF54296.1
gene_biotype: protein_coding
description:
  Thiamine ABC transporter substrate binding subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09470
symbol: OOF54297.1
gene_biotype: protein_coding
description:
  Thiamine/thiamine pyrophosphate ABC transporter permease ThiP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09475
symbol: thiQ
gene_biotype: protein_coding
description:
  Thiamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family.


ensembl_gene_id: BKK55_09480
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase BioB; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: BKK55_09485
symbol: OOF54300.1
gene_biotype: protein_coding
description:
  Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: BKK55_09490
symbol: OOF54301.1
gene_biotype: protein_coding
description:
  Bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: BKK55_09495
symbol: OOF54302.1
gene_biotype: protein_coding
description:
  Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thioredoxin family.


ensembl_gene_id: BKK55_09500
symbol: OOF54303.1
gene_biotype: protein_coding
description:
  2-hydroxyacid dehydrogenase; Fermentative; catalyzes the formationof pyruvate from lactate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: BKK55_09505
symbol: OOF54304.1
gene_biotype: protein_coding
description:
  Catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09550
symbol: BKK55_09550
gene_biotype: protein_coding
description:
  Amidohydrolase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09560
symbol: BKK55_09560
gene_biotype: protein_coding
description:
  Peptide transporter; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09625
symbol: OOF54318.1
gene_biotype: protein_coding
description:
  Type VI secretion system-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09630
symbol: OOF54319.1
gene_biotype: protein_coding
description:
  Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09635
symbol: OOF54320.1
gene_biotype: protein_coding
description:
  Type VI secretion system lysozyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09645
symbol: BKK55_09645
gene_biotype: protein_coding
description:
  Type VI secretion protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09650
symbol: OOF54273.1
gene_biotype: protein_coding
description:
  tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09655
symbol: purK
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: BKK55_09660
symbol: OOF54215.1
gene_biotype: protein_coding
description:
  Aromatic amino acid aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09665
symbol: OOF54216.1
gene_biotype: protein_coding
description:
  Urea transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09670
symbol: ureA
gene_biotype: protein_coding
description:
  Urease subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the urease gamma subunit family.


ensembl_gene_id: BKK55_09675
symbol: ureB
gene_biotype: protein_coding
description:
  Urease subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the urease beta subunit family.


ensembl_gene_id: BKK55_09680
symbol: ureC
gene_biotype: protein_coding
description:
  Urease subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09685
symbol: ureE
gene_biotype: protein_coding
description:
  Urease accessory protein UreE; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.


ensembl_gene_id: BKK55_09690
symbol: ureF
gene_biotype: protein_coding
description:
  Urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.


ensembl_gene_id: BKK55_09695
symbol: ureG
gene_biotype: protein_coding
description:
  Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.


ensembl_gene_id: BKK55_09700
symbol: ureD
gene_biotype: protein_coding
description:
  Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.


ensembl_gene_id: BKK55_09705
symbol: cdd
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis.


ensembl_gene_id: BKK55_09710
symbol: OOF54225.1
gene_biotype: protein_coding
description:
  DNA starvation/stationary phase protection protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family.


ensembl_gene_id: BKK55_09715
symbol: OOF54226.1
gene_biotype: protein_coding
description:
  Glutaredoxin, GrxB family; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09720
symbol: recD
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V subunit alpha; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and re [...]


ensembl_gene_id: BKK55_09725
symbol: recB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V subunit beta; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and rep [...]


ensembl_gene_id: BKK55_09745
symbol: OOF54232.1
gene_biotype: protein_coding
description:
  Adenine permease PurP; Involved in the transport or adenine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09750
symbol: OOF54233.1
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09755
symbol: OOF54234.1
gene_biotype: protein_coding
description:
  aminoacyl-tRNA deacylase; Functions in trans to edit the amino acid from incorrectly charged Cys-tRNA(Pro) via a Cys-tRNA(Pro) deacylase activity. Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.


ensembl_gene_id: BKK55_09760
symbol: fabA
gene_biotype: protein_coding
description:
  3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length.


ensembl_gene_id: BKK55_09770
symbol: matP
gene_biotype: protein_coding
description:
  Ter macrodomain-binding protein MatP; Required for spatial organization of the terminus region of the chromosome (Ter macrodomain) during the cell cycle. Prevents early segregation of duplicated Ter macrodomains during cell division. Binds specifically to matS, which is a 13 bp signature motif repeated within the Ter macrodomain.


ensembl_gene_id: BKK55_09785
symbol: OOF54239.1
gene_biotype: protein_coding
description:
  Bifunctional folylpolyglutamate synthase/dihydrofolate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: BKK55_09790
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: BKK55_09795
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine(38-40) synthase TruA; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: BKK55_09800
symbol: rplY
gene_biotype: protein_coding
description:
  50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family.


ensembl_gene_id: BKK55_09805
symbol: OOF54242.1
gene_biotype: protein_coding
description:
  DedA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09810
symbol: OOF54243.1
gene_biotype: protein_coding
description:
  Riboflavin synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09815
symbol: OOF54244.1
gene_biotype: protein_coding
description:
  MATE family efflux transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09820
symbol: OOF54245.1
gene_biotype: protein_coding
description:
  Metabolite transport protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09825
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: BKK55_09830
symbol: OOF54247.1
gene_biotype: protein_coding
description:
  Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09835
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: BKK55_09840
symbol: OOF54249.1
gene_biotype: protein_coding
description:
  Thiaminase II; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family.


ensembl_gene_id: BKK55_09845
symbol: OOF54250.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09855
symbol: OOF54252.1
gene_biotype: protein_coding
description:
  Phosphonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09870
symbol: OOF54255.1
gene_biotype: protein_coding
description:
  Recombination factor protein RarA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09875
symbol: lolA
gene_biotype: protein_coding
description:
  Outer-membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: BKK55_09880
symbol: OOF54256.1
gene_biotype: protein_coding
description:
  Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09890
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: BKK55_09895
symbol: OOF54259.1
gene_biotype: protein_coding
description:
  CYTH domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09905
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase (quinone); Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: BKK55_09915
symbol: OOF54147.1
gene_biotype: protein_coding
description:
  Histidine phosphatase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09925
symbol: macB
gene_biotype: protein_coding
description:
  Macrolide ABC transporter permease/ATP-binding protein MacB; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.


ensembl_gene_id: BKK55_09935
symbol: glnS
gene_biotype: protein_coding
description:
  glutamine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_09945
symbol: pxpA
gene_biotype: protein_coding
description:
  Lactam utilization protein LamB; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.


ensembl_gene_id: BKK55_09960
symbol: OOF54187.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0260 family.


ensembl_gene_id: BKK55_09965
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family.


ensembl_gene_id: BKK55_09970
symbol: nusB
gene_biotype: protein_coding
description:
  N utilization substance protein B; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: BKK55_09975
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine-phosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: BKK55_09980
symbol: OOF54158.1
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphatase A; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).


ensembl_gene_id: BKK55_09990
symbol: dapB
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: BKK55_09995
symbol: OOF54188.1
gene_biotype: protein_coding
description:
  (2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_10000
symbol: OOF54161.1
gene_biotype: protein_coding
description:
  Arginine:ornithine antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_10015
symbol: OOF54163.1
gene_biotype: protein_coding
description:
  BAX inhibitor protein; Binds to the HflBKC complex which modulates FtsH activity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BI1 family.


ensembl_gene_id: BKK55_10020
symbol: OOF54164.1
gene_biotype: protein_coding
description:
  TIGR01777 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_10035
symbol: OOF54167.1
gene_biotype: protein_coding
description:
  Competence protein ComEA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_10040
symbol: OOF54168.1
gene_biotype: protein_coding
description:
  2-oxoglutarate dehydrogenase E1 component; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_10045
symbol: OOF54169.1
gene_biotype: protein_coding
description:
  Dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: BKK55_10050
symbol: sucC
gene_biotype: protein_coding
description:
  succinate--CoA ligase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: BKK55_10055
symbol: sucD
gene_biotype: protein_coding
description:
  succinate--CoA ligase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: BKK55_10060
symbol: OOF54172.1
gene_biotype: protein_coding
description:
  threonylcarbamoyl-AMP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SUA5 family.


ensembl_gene_id: BKK55_10065
symbol: OOF54189.1
gene_biotype: protein_coding
description:
  23S rRNA pseudouridylate synthase; Catalyzes the synthesis of pseudouridine from uracil-2605 in 23S ribosomal RNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: BKK55_10070
symbol: OOF54173.1
gene_biotype: protein_coding
description:
  Transcriptional regulator CysB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: BKK55_10100
symbol: prmB
gene_biotype: protein_coding
description:
  Ribosomal protein L3 N(5)-glutamine methyltransferase; Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue; Belongs to the protein N5-glutamine methyltransferase family. PrmB subfamily.


ensembl_gene_id: BKK55_10105
symbol: OOF54179.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0115 family.


ensembl_gene_id: BKK55_10115
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: BKK55_10125
symbol: OOF54183.1
gene_biotype: protein_coding
description:
  Universal stress protein UspE; With UspC and UspD is involved in resistance to UV irradiation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_10130
symbol: OOF54184.1
gene_biotype: protein_coding
description:
  Transcriptional regulator FNR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_10150
symbol: OOF54000.1
gene_biotype: protein_coding
description:
  Non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: BKK55_10155
symbol: kdkA
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonic acid kinase; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family.


ensembl_gene_id: BKK55_10160
symbol: OOF54002.1
gene_biotype: protein_coding
description:
  ADP-heptose--LPS heptosyltransferase I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_10165
symbol: OOF54003.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: BKK55_10185
symbol: rraA
gene_biotype: protein_coding
description:
  Ribonuclease E activity regulator RraA; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome. Modulates RNA-binding and helicase activities of the degradosome.


ensembl_gene_id: BKK55_10190
symbol: menA
gene_biotype: protein_coding
description:
  1,4-dihydroxy-2-naphthoate polyprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.


ensembl_gene_id: BKK55_10195
symbol: OOF54008.1
gene_biotype: protein_coding
description:
  tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_10200
symbol: OOF54067.1
gene_biotype: protein_coding
description:
  AI-2E family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_10205
symbol: OOF54009.1
gene_biotype: protein_coding
description:
  Arsenate reductase (glutaredoxin); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_10210
symbol: OOF54010.1
gene_biotype: protein_coding
description:
  Alternative ribosome-rescue factor A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_10215
symbol: OOF54011.1
gene_biotype: protein_coding
description:
  Dithiol-disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_10220
symbol: bamC
gene_biotype: protein_coding
description:
  Outer membrane assembly protein BamC; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: BKK55_10225
symbol: dapA
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: BKK55_10230
symbol: OOF54068.1
gene_biotype: protein_coding
description:
  Thioredoxin-dependent thiol peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_10235
symbol: OOF54014.1
gene_biotype: protein_coding
description:
  TonB-system energizer ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_10240
symbol: OOF54015.1
gene_biotype: protein_coding
description:
  TonB system transport protein ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_10245
symbol: OOF54016.1
gene_biotype: protein_coding
description:
  Energy transducer TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.


ensembl_gene_id: BKK55_10250
symbol: rhlB
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase RhlB; DEAD-box RNA helicase involved in RNA degradation. Has RNA- dependent ATPase activity and unwinds double-stranded RNA. Belongs to the DEAD box helicase family. RhlB subfamily.


ensembl_gene_id: BKK55_10260
symbol: yacG
gene_biotype: protein_coding
description:
  DNA gyrase inhibitor YacG; Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C- terminal domain of GyrB, which probably disrupts DNA binding by the gyrase.


ensembl_gene_id: BKK55_10265
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: BKK55_10270
symbol: OOF54021.1
gene_biotype: protein_coding
description:
  Prepilin peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_10275
symbol: OOF54022.1
gene_biotype: protein_coding
description:
  Type II secretion system protein F; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_10280
symbol: OOF54023.1
gene_biotype: protein_coding
description:
  Protein transporter HofB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_10290
symbol: OOF54025.1
gene_biotype: protein_coding
description:
  N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_10295
symbol: rppH
gene_biotype: protein_coding
description:
  RNA pyrophosphohydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.


ensembl_gene_id: BKK55_10305
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: BKK55_10310
symbol: thyA
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: BKK55_10315
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA adenosine(34) deaminase TadA; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: BKK55_10320
symbol: ung
gene_biotype: protein_coding
description:
  uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: BKK55_10325
symbol: grcA
gene_biotype: protein_coding
description:
  Autonomous glycyl radical cofactor GrcA; Acts as a radical domain for damaged PFL and possibly other radical proteins.


ensembl_gene_id: BKK55_10330
symbol: lepA
gene_biotype: protein_coding
description:
  Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: BKK55_10335
symbol: OOF54033.1
gene_biotype: protein_coding
description:
  Signal peptidase I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.


ensembl_gene_id: BKK55_10340
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: BKK55_10345
symbol: era
gene_biotype: protein_coding
description:
  GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: BKK55_10365
symbol: OOF54070.1
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein CcmF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_10370
symbol: OOF54039.1
gene_biotype: protein_coding
description:
  Cytochrome c nitrite reductase subunit NrfD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_10375
symbol: OOF54040.1
gene_biotype: protein_coding
description:
  Cytochrome c nitrite reductase Fe-S protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_10380
symbol: OOF54041.1
gene_biotype: protein_coding
description:
  Cytochrome c nitrite reductase pentaheme subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_10385
symbol: nrfA
gene_biotype: protein_coding
description:
  Ammonia-forming cytochrome c nitrite reductase subunit c552; Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process; Belongs to the cytochrome c-552 family.


ensembl_gene_id: BKK55_10395
symbol: mutM
gene_biotype: protein_coding
description:
  DNA-formamidopyrimidine glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: BKK55_10400
symbol: rpmG
gene_biotype: protein_coding
description:
  50S ribosomal protein L33; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL33 family.


ensembl_gene_id: BKK55_10405
symbol: rpmB
gene_biotype: protein_coding
description:
  50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family.


ensembl_gene_id: BKK55_10410
symbol: OOF54047.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0758 family.


ensembl_gene_id: BKK55_10415
symbol: OOF54048.1
gene_biotype: protein_coding
description:
  Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: BKK55_10420
symbol: dut
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: BKK55_10425
symbol: slmA
gene_biotype: protein_coding
description:
  Nucleoid occlusion factor SlmA; Required for nucleoid occlusion (NO) phenomenon, which prevents Z-ring formation and cell division over the nucleoid. Acts as a DNA-associated cell division inhibitor that binds simultaneously chromosomal DNA and FtsZ, and disrupts the assembly of FtsZ polymers. SlmA-DNA-binding sequences (SBS) are dispersed on non-Ter regions of the chromosome, preventing FtsZ polymerization at these regions.


ensembl_gene_id: BKK55_10430
symbol: OOF54051.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0270 family.


ensembl_gene_id: BKK55_10435
symbol: OOF54052.1
gene_biotype: protein_coding
description:
  Transcriptional regulator Crp; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_10440
symbol: OOF54053.1
gene_biotype: protein_coding
description:
  PTS glucose transporter subunit IIBC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_10445
symbol: nanM
gene_biotype: protein_coding
description:
  N-acetylneuraminic acid mutarotase; Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta- anomer, accelerating the equilibrium between the alpha- and beta- anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses; Belongs to the NanM family.


ensembl_gene_id: BKK55_10455
symbol: OOF54056.1
gene_biotype: protein_coding
description:
  Sialic acid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_10460
symbol: nanE
gene_biotype: protein_coding
description:
  N-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).


ensembl_gene_id: BKK55_10465
symbol: nanK
gene_biotype: protein_coding
description:
  N-acetylmannosamine kinase; Catalyzes the phosphorylation of N-acetylmannosamine (ManNAc) to ManNAc-6-P; Belongs to the ROK (NagC/XylR) family. NanK subfamily.


ensembl_gene_id: BKK55_10470
symbol: OOF54059.1
gene_biotype: protein_coding
description:
  N-acetylmannosamine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_10475
symbol: nanA
gene_biotype: protein_coding
description:
  N-acetylneuraminate lyase; Catalyzes the reversible aldol cleavage of N-acetylneuraminic acid (sialic acid; Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate.


ensembl_gene_id: BKK55_10480
symbol: nagB
gene_biotype: protein_coding
description:
  Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.


ensembl_gene_id: BKK55_10485
symbol: OOF54062.1
gene_biotype: protein_coding
description:
  N-acetylglucosamine-6-phosphate deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: BKK55_10525
symbol: mukB
gene_biotype: protein_coding
description:
  Cell division protein MukB; Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division; Belongs to the SMC family. MukB subfamily.


ensembl_gene_id: BKK55_10530
symbol: mukE
gene_biotype: protein_coding
description:
  Chromosome partitioning protein MukE; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF.


ensembl_gene_id: BKK55_10535
symbol: mukF
gene_biotype: protein_coding
description:
  Condensin subunit MukF; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity.


ensembl_gene_id: BKK55_10540
symbol: ttcA
gene_biotype: protein_coding
description:
  tRNA 2-thiocytidine(32) synthetase TtcA; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.


ensembl_gene_id: BKK55_10575
symbol: metE
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.


ensembl_gene_id: BKK55_10610
symbol: OOF53848.1
gene_biotype: protein_coding
description:
  DNA (cytosine-5-)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.


ensembl_gene_id: BKK55_10670
symbol: OOF53856.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC; Belongs to the rusA family.


