# geneInfo

ensembl_gene_id: Noca_0001
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: Noca_0002
symbol: Noca_0002
gene_biotype: protein_coding
description:
  DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]


ensembl_gene_id: Noca_0003
symbol: Noca_0003
gene_biotype: protein_coding
description:
  TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: sco:SCO3877 putative 6-phosphogluconate dehydrogenase.


ensembl_gene_id: Noca_0004
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP.


ensembl_gene_id: Noca_0006
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: Noca_0007
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: Noca_0011
symbol: Noca_0011
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: mmc:Mmcs_2727 regulatory protein GntR, HTH.


ensembl_gene_id: Noca_0015
symbol: Noca_0015
gene_biotype: protein_coding
description:
  PFAM: phospholipid/glycerol acyltransferase; KEGG: fal:FRAAL0743 hypothetical protein; putative signal peptide; putative acyltransferase domain.


ensembl_gene_id: Noca_0016
symbol: Noca_0016
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: aor:AO090120000081 predicted protein Pfam: IncA TolA PROSITE: ALA_RICH ARG_RICH GLU_RICH GLY_RICH.


ensembl_gene_id: Noca_0017
symbol: Noca_0017
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: Noca_0022
symbol: Noca_0022
gene_biotype: protein_coding
description:
  PFAM: protein kinase; PASTA domain containing protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: tfu:Tfu_3066 tyrosine protein kinase:serine/threonine protein kinase:PASTA.


ensembl_gene_id: Noca_0023
symbol: Noca_0023
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function RIO1; protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: tfu:Tfu_3065 tyrosine protein kinase:serine/threonine protein kinase.


ensembl_gene_id: Noca_0024
symbol: Noca_0024
gene_biotype: protein_coding
description:
  Cell elongation-specific peptidoglycan D,D-transpeptidase; PFAM: penicillin-binding protein, transpeptidase; KEGG: fal:FRAAL6753 putative penicillin-binding protein PbpA.


ensembl_gene_id: Noca_0025
symbol: Noca_0025
gene_biotype: protein_coding
description:
  Cell elongation-specific peptidoglycan biosynthesis regulator RodA; PFAM: cell cycle protein; KEGG: fal:FRAAL6752 putative cell division protein FtsW; Belongs to the SEDS family.


ensembl_gene_id: Noca_0031
symbol: Noca_0031
gene_biotype: protein_coding
description:
  PFAM: MaoC domain protein dehydratase; KEGG: bja:bll6394 putative monoamine oxidase regulatory protein.


ensembl_gene_id: Noca_0032
symbol: Noca_0032
gene_biotype: protein_coding
description:
  PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; KEGG: mka:MK0828 succinate dehydrogenase/fumarate reductase, flavoprotein subunit.


ensembl_gene_id: Noca_0033
symbol: Noca_0033
gene_biotype: protein_coding
description:
  PFAM: dihydrodipicolinate synthetase; KEGG: sco:SCO1889 dihydropicolinate synthase; Belongs to the DapA family.


ensembl_gene_id: Noca_0034
symbol: Noca_0034
gene_biotype: protein_coding
description:
  PFAM: FAD dependent oxidoreductase; KEGG: fal:FRAAL3119 conserved hypothetical protein; putative cyclic nucleotide-binding domain.


ensembl_gene_id: Noca_0035
symbol: Noca_0035
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: sco:SCO6565 transcriptional regulator.


ensembl_gene_id: Noca_0036
symbol: Noca_0036
gene_biotype: protein_coding
description:
  PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: rxy:Rxyl_2477 thiamine pyrophosphate enzyme-like TPP binding region; Belongs to the TPP enzyme family.


ensembl_gene_id: Noca_0038
symbol: Noca_0038
gene_biotype: protein_coding
description:
  PFAM: Dimethylmenaquinone methyltransferase; KEGG: pol:Bpro_2296 dimethylmenaquinone methyltransferase.


ensembl_gene_id: Noca_0039
symbol: Noca_0039
gene_biotype: protein_coding
description:
  Formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mes:Meso_2971 L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.


ensembl_gene_id: Noca_0041
symbol: Noca_0041
gene_biotype: protein_coding
description:
  Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: extracellular solute-binding protein, family 1; KEGG: mes:Meso_4520 extracellular solute-binding protein, family 1; TC 3.A.1.1.-.


ensembl_gene_id: Noca_0042
symbol: Noca_0042
gene_biotype: protein_coding
description:
  Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lin:lin0218 similar to sugar ABC transporters, permease proteins; TC 3.A.1.1.-.


ensembl_gene_id: Noca_0043
symbol: Noca_0043
gene_biotype: protein_coding
description:
  Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tte:TTE1936 sugar permeases; TC 3.A.1.1.-.


ensembl_gene_id: Noca_0044
symbol: Noca_0044
gene_biotype: protein_coding
description:
  PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ape:APE1484 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Noca_0046
symbol: Noca_0046
gene_biotype: protein_coding
description:
  PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: ppu:PP_3725 acyl-CoA dehydrogenase, putative.


ensembl_gene_id: Noca_0056
symbol: Noca_0056
gene_biotype: protein_coding
description:
  PFAM: Glycosyl hydrolase family 32, N terminal domain protein; SMART: glycoside hydrolase, family 32; KEGG: hma:rrnAC1479 sucrose-6-phosphate hydrolase.


ensembl_gene_id: Noca_0058
symbol: Noca_0058
gene_biotype: protein_coding
description:
  Transcriptional regulator, LacI family; PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sma:SAV6288 LacI-family transcriptional regulator.


ensembl_gene_id: Noca_0059
symbol: Noca_0059
gene_biotype: protein_coding
description:
  PFAM: extracellular solute-binding protein, family 1; KEGG: oih:OB0774 sugar ABC transporter sugar-binding protein; TC 3.A.1.1.-.


ensembl_gene_id: Noca_0060
symbol: Noca_0060
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB0775 sugar ABC transporter permease; TC 3.A.1.1.-.


ensembl_gene_id: Noca_0061
symbol: Noca_0061
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB0776 sugar ABC transporter permease; TC 3.A.1.1.-.


ensembl_gene_id: Noca_0071
symbol: Noca_0071
gene_biotype: protein_coding
description:
  PFAM: regulatory protein, AsnC/Lrp family; KEGG: rha:RHA1_ro03337 probable leucine-responsive regulator.


ensembl_gene_id: Noca_0072
symbol: Noca_0072
gene_biotype: protein_coding
description:
  PFAM: ornithine cyclodeaminase/mu-crystallin; Shikimate/quinate 5-dehydrogenase; KEGG: bcz:BCZK0803 ornithine cyclodeaminase.


ensembl_gene_id: Noca_0075
symbol: Noca_0075
gene_biotype: protein_coding
description:
  Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: cgb:cg1413 secreted sugar-binding protein; TC 3.A.1.2.-.


ensembl_gene_id: Noca_0076
symbol: Noca_0076
gene_biotype: protein_coding
description:
  Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO0811 putative ABC transporter ATP-binding protein; TC 3.A.1.2.-.


ensembl_gene_id: Noca_0077
symbol: Noca_0077
gene_biotype: protein_coding
description:
  Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: sha:SH0178 ribose ABC transporter permease; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Noca_0078
symbol: Noca_0078
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: bpm:BURPS1710b_3485 short chain dehydrogenase.


ensembl_gene_id: Noca_0079
symbol: Noca_0079
gene_biotype: protein_coding
description:
  5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: mta:Moth_1967 5-oxoprolinase (ATP-hydrolyzing).


ensembl_gene_id: Noca_0080
symbol: Noca_0080
gene_biotype: protein_coding
description:
  5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase B/oxoprolinase; KEGG: gka:GK2893 N-methylhydantoinase B (ATP-hydrolyzing).


ensembl_gene_id: Noca_0084
symbol: Noca_0084
gene_biotype: protein_coding
description:
  FAD-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sco:SCO6291 secreted oxidase.


ensembl_gene_id: Noca_0085
symbol: Noca_0085
gene_biotype: protein_coding
description:
  PFAM: dihydrodipicolinate synthetase; KEGG: sma:SAV1731 putative dihydrodipicolinate synthase; Belongs to the DapA family.


ensembl_gene_id: Noca_0089
symbol: Noca_0089
gene_biotype: protein_coding
description:
  TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: tfu:Tfu_0433 delta-1-pyrroline-5-carboxylate dehydrogenase 1.


ensembl_gene_id: Noca_0092
symbol: Noca_0092
gene_biotype: protein_coding
description:
  TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: tfu:Tfu_1968 allophanate hydrolase subunit 2.


ensembl_gene_id: Noca_0093
symbol: Noca_0093
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF1445; KEGG: pst:PSPTO_5379 hypothetical protein; Belongs to the D-glutamate cyclase family.


ensembl_gene_id: Noca_0095
symbol: Noca_0095
gene_biotype: protein_coding
description:
  PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: mlo:mll9131 hydantoinase.


ensembl_gene_id: Noca_0099
symbol: Noca_0099
gene_biotype: protein_coding
description:
  Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: rha:RHA1_ro02908 possible ABC sugar transporter, substrate binding component; TC 3.A.1.2.-.


ensembl_gene_id: Noca_0100
symbol: Noca_0100
gene_biotype: protein_coding
description:
  Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rha:RHA1_ro09082 ABC sugar transporter, ATP-binding component; TC 3.A.1.2.-.


ensembl_gene_id: Noca_0101
symbol: Noca_0101
gene_biotype: protein_coding
description:
  Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: rha:RHA1_ro11174 ABC sugar transporter, permease component; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Noca_0102
symbol: Noca_0102
gene_biotype: protein_coding
description:
  Dipeptidase, Metallo peptidase, MEROPS family M19; PFAM: peptidase M19, renal dipeptidase; KEGG: dsy:DSY1937 hypothetical protein.


ensembl_gene_id: Noca_0106
symbol: Noca_0106
gene_biotype: protein_coding
description:
  PFAM: peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins; KEGG: mmc:Mmcs_0342 peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins.


ensembl_gene_id: Noca_0108
symbol: Noca_0108
gene_biotype: protein_coding
description:
  PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: dge:Dgeo_2864 alcohol dehydrogenase GroES-like.


ensembl_gene_id: Noca_0113
symbol: Noca_0113
gene_biotype: protein_coding
description:
  Malate dehydrogenase (oxaloacetate-decarboxylating); PFAM: amino acid-binding ACT domain protein; malic enzyme domain protein; malic enzyme, NAD-binding; KEGG: tfu:Tfu_2390 malate dehydrogenase (oxaloacetate decarboxylating).


ensembl_gene_id: Noca_0117
symbol: Noca_0117
gene_biotype: protein_coding
description:
  PFAM: transcriptional regulator PadR family protein; KEGG: nfa:nfa31300 putative transcriptional regulator.


ensembl_gene_id: Noca_0120
symbol: Noca_0120
gene_biotype: protein_coding
description:
  KEGG: tfu:Tfu_1447 ABC-type multidrug transport system ATPase component; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.


ensembl_gene_id: Noca_0121
symbol: Noca_0121
gene_biotype: protein_coding
description:
  PFAM: ABC-2 type transporter; KEGG: sco:SCO5382 putative ABC transporter, integral membrane subunit.


ensembl_gene_id: Noca_0122
symbol: Noca_0122
gene_biotype: protein_coding
description:
  Alkane 1-monooxygenase; PFAM: Rubredoxin-type Fe(Cys)4 protein; fatty acid desaturase; KEGG: nfa:nfa46180 putative alkane-1-monooxygenase.


ensembl_gene_id: Noca_0124
symbol: Noca_0124
gene_biotype: protein_coding
description:
  TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: sma:SAV4524 transmembrane efflux protein.


ensembl_gene_id: Noca_0127
symbol: purU
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).


ensembl_gene_id: Noca_0130
symbol: Noca_0130
gene_biotype: protein_coding
description:
  PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_1554 alcohol dehydrogenase, zinc-binding protein.


ensembl_gene_id: Noca_0131
symbol: Noca_0131
gene_biotype: protein_coding
description:
  Endothelin-converting enzyme, Metallo peptidase, MEROPS family M13; PFAM: peptidase M13, neprilysin; peptidase M13; KEGG: fal:FRAAL4107 zinc metalloendopeptidase.


ensembl_gene_id: Noca_0133
symbol: Noca_0133
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase, RecQ-like protein; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: sma:SAV2450 putative ATP-dependent DNA helicase.


ensembl_gene_id: Noca_0136
symbol: Noca_0136
gene_biotype: protein_coding
description:
  TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro01949 multidrug resistance transporter, MFS superfamily.


ensembl_gene_id: Noca_0137
symbol: Noca_0137
gene_biotype: protein_coding
description:
  PFAM: glutathione peroxidase; KEGG: nfa:nfa46650 putative glutathione peroxidase; Belongs to the glutathione peroxidase family.


ensembl_gene_id: Noca_0138
symbol: Noca_0138
gene_biotype: protein_coding
description:
  PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases-like; KEGG: sco:SCO1167 helicase.


ensembl_gene_id: Noca_0143
symbol: Noca_0143
gene_biotype: protein_coding
description:
  TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: nfa:nfa18780 putative thioredoxin; Belongs to the thioredoxin family.


ensembl_gene_id: Noca_0147
symbol: Noca_0147
gene_biotype: protein_coding
description:
  Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: sco:SCO2776 acetyl/propionyl CoA carboxylase, beta subunit.


ensembl_gene_id: Noca_0148
symbol: Noca_0148
gene_biotype: protein_coding
description:
  Carbamoyl-phosphate synthase L chain, ATP-binding protein; PFAM: biotin/lipoyl attachment domain-containing protein; phosphoribosylglycinamide synthetase; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: rso:RSc0265 probable acyl-CoA carboxylase alpha chain protein.


ensembl_gene_id: Noca_0149
symbol: Noca_0149
gene_biotype: protein_coding
description:
  hydroxymethylglutaryl-CoA lyase; PFAM: pyruvate carboxyltransferase; KEGG: sma:SAV5276 putative hydroxymethylglutaryl-CoA lyase.


ensembl_gene_id: Noca_0154
symbol: aat
gene_biotype: protein_coding
description:
  Leucyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: Noca_0157
symbol: Noca_0157
gene_biotype: protein_coding
description:
  DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycolase; KEGG: lxx:Lxx00140 formamidopyrimidine-DNA glycosylase; Belongs to the FPG family.


ensembl_gene_id: Noca_0160
symbol: Noca_0160
gene_biotype: protein_coding
description:
  methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mlo:mlr1095 hypothetical protein.


ensembl_gene_id: Noca_0164
symbol: Noca_0164
gene_biotype: protein_coding
description:
  PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: rha:RHA1_ro05084 probable adenylate cyclase.


ensembl_gene_id: Noca_0168
symbol: larC
gene_biotype: protein_coding
description:
  Protein of unknown function DUF111; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family.


ensembl_gene_id: Noca_0173
symbol: Noca_0173
gene_biotype: protein_coding
description:
  PFAM: phosphoesterase, PA-phosphatase related; diacylglycerol kinase, catalytic region; KEGG: lxx:Lxx21980 hypothetical protein.


ensembl_gene_id: Noca_0174
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: Noca_0175
symbol: Noca_0175
gene_biotype: protein_coding
description:
  TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: pac:PPA2205 hydrolase (HAD superfamily).


ensembl_gene_id: Noca_0177
symbol: Noca_0177
gene_biotype: protein_coding
description:
  TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: sco:SCO3950 hypothetical protein.


ensembl_gene_id: Noca_0180
symbol: Noca_0180
gene_biotype: protein_coding
description:
  PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sma:SAV4368 quinone oxidoreductase.


ensembl_gene_id: Noca_0183
symbol: Noca_0183
gene_biotype: protein_coding
description:
  PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: nfa:nfa46820 putative hydrolase.


ensembl_gene_id: Noca_0185
symbol: Noca_0185
gene_biotype: protein_coding
description:
  PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: fra:Francci3_3765 biotin/lipoyl attachment.


ensembl_gene_id: Noca_0188
symbol: Noca_0188
gene_biotype: protein_coding
description:
  PFAM: regulatory protein, LuxR; Helix-turn-helix, type 11 domain protein; Sigma-70, region 4 type 2; KEGG: sma:SAV86 erythropoiesis-stimulating protein.


ensembl_gene_id: Noca_0190
symbol: pckG
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase (GTP); Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family.


ensembl_gene_id: Noca_0191
symbol: Noca_0191
gene_biotype: protein_coding
description:
  PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: mbu:Mbur_0510 external sensor signal transduction histidine kinase.


ensembl_gene_id: Noca_0192
symbol: Noca_0192
gene_biotype: protein_coding
description:
  Phosphate ABC transporter substrate-binding protein, PhoT family; TIGRFAM: phosphate binding protein; KEGG: tth:TTC1726 phosphate-binding protein; TC 3.A.1.7.1.


ensembl_gene_id: Noca_0194
symbol: Noca_0194
gene_biotype: protein_coding
description:
  PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: sth:STH749 two-component sensor kinase, probably involved in phosphate sensing.


ensembl_gene_id: Noca_0196
symbol: Noca_0196
gene_biotype: protein_coding
description:
  Transcriptional regulator, LacI family; PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: dge:Dgeo_2243 transcriptional regulator, LacI family.


ensembl_gene_id: Noca_0197
symbol: Noca_0197
gene_biotype: protein_coding
description:
  PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: sco:SCO2226 bi-functional protein (secreted alpha-amylase/dextrinase).


ensembl_gene_id: Noca_0198
symbol: Noca_0198
gene_biotype: protein_coding
description:
  PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: sil:SPO1469 3-ketosteroid dehydrogenase, putative.


ensembl_gene_id: Noca_0200
symbol: Noca_0200
gene_biotype: protein_coding
description:
  PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: bxe:Bxe_B1003 putative succinate dehydrogenase/fumarate reductase, flavoprotein subunit.


ensembl_gene_id: Noca_0202
symbol: Noca_0202
gene_biotype: protein_coding
description:
  PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: sil:SPO0595 gluconate 5-dehydrogenase.


ensembl_gene_id: Noca_0203
symbol: Noca_0203
gene_biotype: protein_coding
description:
  PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: bbr:BB3064 hypothetical protein.


ensembl_gene_id: Noca_0207
symbol: Noca_0207
gene_biotype: protein_coding
description:
  PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_1630 glyoxalase/bleomycin resistance protein/dioxygenase.


ensembl_gene_id: Noca_0209
symbol: Noca_0209
gene_biotype: protein_coding
description:
  PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: bur:Bcep18194_B1413 acyl-CoA dehydrogenase-like.


ensembl_gene_id: Noca_0211
symbol: Noca_0211
gene_biotype: protein_coding
description:
  5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase; PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rha:RHA1_ro04906 hypothetical protein.


ensembl_gene_id: Noca_0215
symbol: Noca_0215
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc02358 putative high-affinity branched-chain amino acid transport ATP-binding ABC transporter protein; TC 3.A.1.4.-.


ensembl_gene_id: Noca_0216
symbol: Noca_0216
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport system permease protein; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: dra:DRA0261 branched-chain amino acid transport system ATP-binding protein; TC 3.A.1.4.-; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Noca_0217
symbol: Noca_0217
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; KEGG: gka:GK2979 branched-chain amino acid ABC transporter (permease); TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Noca_0218
symbol: Noca_0218
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter substrate-binding protein, HAAT family; KEGG: nfa:nfa52540 hypothetical protein; TC 3.A.1.4.-.


ensembl_gene_id: Noca_0219
symbol: Noca_0219
gene_biotype: protein_coding
description:
  Transcriptional regulator, TetR family; PFAM: regulatory protein, TetR; KEGG: mpa:MAP1732c hypothetical protein.


ensembl_gene_id: Noca_0221
symbol: Noca_0221
gene_biotype: protein_coding
description:
  PFAM: flavin reductase domain protein, FMN-binding; KEGG: nar:Saro_1462 flavin reductase-like, FMN-binding.


ensembl_gene_id: Noca_0222
symbol: Noca_0222
gene_biotype: protein_coding
description:
  PFAM: molybdopterin dehydrogenase, FAD-binding; KEGG: mtc:MT0390 carbon monoxide dehydrogenase, medium subunit, putative.


ensembl_gene_id: Noca_0223
symbol: Noca_0223
gene_biotype: protein_coding
description:
  PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rha:RHA1_ro05231 possible carbon monoxide dehydrogenase.


ensembl_gene_id: Noca_0224
symbol: Noca_0224
gene_biotype: protein_coding
description:
  TIGRFAM: carbon-monoxide dehydrogenase, large subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: mmc:Mmcs_0491 carbon-monoxide dehydrogenase, large subunit.


ensembl_gene_id: Noca_0226
symbol: Noca_0226
gene_biotype: protein_coding
description:
  PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: mbo:Mb0384 probable transcriptional regulatory protein (probably LysR-family).


ensembl_gene_id: Noca_0228
symbol: Noca_0228
gene_biotype: protein_coding
description:
  PFAM: molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: mmc:Mmcs_0489 carbon-monoxide dehydrogenase.


ensembl_gene_id: Noca_0229
symbol: Noca_0229
gene_biotype: protein_coding
description:
  Carbon monoxide dehydrogenase, small subunit; PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rxy:Rxyl_0111 (2Fe-2S)-binding protein.


ensembl_gene_id: Noca_0230
symbol: Noca_0230
gene_biotype: protein_coding
description:
  Xanthine dehydrogenase, molybdenum binding subunit apoprotein; KEGG: rha:RHA1_ro05232 possible carbon monoxide dehydrogenase; TIGRFAM: carbon-monoxide dehydrogenase, large subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding.


ensembl_gene_id: Noca_0231
symbol: Noca_0231
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF182; YHS domain protein; SMART: TRASH domain protein; KEGG: rha:RHA1_ro05233 hypothetical protein.


ensembl_gene_id: Noca_0238
symbol: Noca_0238
gene_biotype: protein_coding
description:
  PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor, type A; KEGG: rxy:Rxyl_0115 VWA containing CoxE-like protein.


ensembl_gene_id: Noca_0239
symbol: Noca_0239
gene_biotype: protein_coding
description:
  PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rxy:Rxyl_0114 ATPase associated with various cellular activities, AAA_5.


ensembl_gene_id: Noca_0241
symbol: Noca_0241
gene_biotype: protein_coding
description:
  PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: tfu:Tfu_0068 putative acyl-CoA dehydrogenase.


ensembl_gene_id: Noca_0243
symbol: Noca_0243
gene_biotype: protein_coding
description:
  TIGRFAM: NADPH-dependent F420 reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; KEGG: tfu:Tfu_0970 NADPH-dependent F420 reductase.


ensembl_gene_id: Noca_0247
symbol: Noca_0247
gene_biotype: protein_coding
description:
  PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: sth:STH843 two-component sensor histidine kinase.


ensembl_gene_id: Noca_0249
symbol: Noca_0249
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO6360 ABC transporter ATP-binding protein.


ensembl_gene_id: Noca_0251
symbol: recC
gene_biotype: protein_coding
description:
  DNA helicase/exodeoxyribonuclease V, gamma subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recomb [...]


ensembl_gene_id: Noca_0252
symbol: recB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V, beta subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and re [...]


ensembl_gene_id: Noca_0253
symbol: recD
gene_biotype: protein_coding
description:
  DNA helicase/exodeoxyribonuclease V, alpha subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recomb [...]


ensembl_gene_id: Noca_0258
symbol: menB
gene_biotype: protein_coding
description:
  1,4-Dihydroxy-2-naphthoate synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.


ensembl_gene_id: Noca_0260
symbol: Noca_0260
gene_biotype: protein_coding
description:
  TIGRFAM: NAD(P) transhydrogenase, alpha subunit; PFAM: alanine dehydrogenase/PNT domain protein; KEGG: rha:RHA1_ro02720 NAD(P) transhydrogenase alpha subunit.


ensembl_gene_id: Noca_0261
symbol: Noca_0261
gene_biotype: protein_coding
description:
  NAD(P) transhydrogenase, beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.


ensembl_gene_id: Noca_0265
symbol: cobB
gene_biotype: protein_coding
description:
  PFAM: Silent information regulator protein Sir2; KEGG: sal:Sala_2748 silent information regulator protein Sir2; Belongs to the sirtuin family. Class III subfamily.


ensembl_gene_id: Noca_0267
symbol: Noca_0267
gene_biotype: protein_coding
description:
  Maltooligosyl trehalose hydrolase; KEGG: nfa:nfa18050 putative glycosyl hydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain.


ensembl_gene_id: Noca_0268
symbol: Noca_0268
gene_biotype: protein_coding
description:
  KEGG: lxx:Lxx02190 malto-oligosyl trehalose synthase; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain.


ensembl_gene_id: Noca_0269
symbol: Noca_0269
gene_biotype: protein_coding
description:
  Isoamylase; KEGG: mpa:MAP3262c GlgX_2; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: Noca_0270
symbol: Noca_0270
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro04813 multidrug resistance transporter, MFS superfamily.


ensembl_gene_id: Noca_0271
symbol: Noca_0271
gene_biotype: protein_coding
description:
  PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rha:RHA1_ro08138 long-chain-acyl-CoA dehydrogenase.


ensembl_gene_id: Noca_0273
symbol: Noca_0273
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: Noca_0275
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: Noca_0277
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA-adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: Noca_0279
symbol: Noca_0279
gene_biotype: protein_coding
description:
  PFAM: ferredoxin-dependent glutamate synthase; KEGG: mmc:Mmcs_5268 ferredoxin-dependent glutamate synthase; Belongs to the glutamate synthase family.


ensembl_gene_id: Noca_0280
symbol: Noca_0280
gene_biotype: protein_coding
description:
  (S)-2-hydroxy-acid oxidase; PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: nfa:nfa32960 putative L-lactate dehydrogenase.


ensembl_gene_id: Noca_0288
symbol: Noca_0288
gene_biotype: protein_coding
description:
  PFAM: Enoyl-CoA hydratase/isomerase; KEGG: nfa:nfa50130 putative enoyl-CoA hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Noca_0291
symbol: Noca_0291
gene_biotype: protein_coding
description:
  PFAM: ATPase associated with various cellular activities, AAA_5; KEGG: fal:FRAAL1932 hypothetical protein.


ensembl_gene_id: Noca_0296
symbol: Noca_0296
gene_biotype: protein_coding
description:
  PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: mbo:Mb1848 hypothetical protein.


ensembl_gene_id: Noca_0297
symbol: Noca_0297
gene_biotype: protein_coding
description:
  PFAM: Redoxin domain protein; KEGG: fal:FRAAL5492 hypothetical protein; putative thiol:disulfide interchange protein.


ensembl_gene_id: Noca_0298
symbol: Noca_0298
gene_biotype: protein_coding
description:
  Potassium/proton antiporter, CPA1 family; PFAM: TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: sco:SCO3185 putative Na+/H+ antiporter; TC 2.A.36.


ensembl_gene_id: Noca_0303
symbol: Noca_0303
gene_biotype: protein_coding
description:
  PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: sco:SCO5734 ATP/GTP binding protein (membrane protein).


ensembl_gene_id: Noca_0306
symbol: Noca_0306
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF909; KEGG: cgb:cg0672 hypothetical protein; Belongs to the WXG100 family.


ensembl_gene_id: Noca_0309
symbol: Noca_0309
gene_biotype: protein_coding
description:
  PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: mmc:Mmcs_0380 peptidase S8 and S53, subtilisin, kexin, sedolisin.


ensembl_gene_id: Noca_0310
symbol: Noca_0310
gene_biotype: protein_coding
description:
  PFAM: multicopper oxidase, type 1; multicopper oxidase, type 2; multicopper oxidase, type 3; KEGG: nfa:pnf1230 putative multicopper oxidase.


ensembl_gene_id: Noca_0312
symbol: Noca_0312
gene_biotype: protein_coding
description:
  PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rha:RHA1_ro11203 response regulator, two-component system.


ensembl_gene_id: Noca_0313
symbol: Noca_0313
gene_biotype: protein_coding
description:
  PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rha:RHA1_ro11204 histidine kinase.


ensembl_gene_id: Noca_0314
symbol: Noca_0314
gene_biotype: protein_coding
description:
  Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: rha:RHA1_ro11210 probable copper-exporting ATPase.


ensembl_gene_id: Noca_0317
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: Noca_0318
symbol: Noca_0318
gene_biotype: protein_coding
description:
  Conserved hypothetical protein 103; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: Noca_0319
symbol: recR
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: Noca_0321
symbol: Noca_0321
gene_biotype: protein_coding
description:
  KEGG: tfu:Tfu_0043 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; Belongs to the aspartokinase family.


ensembl_gene_id: Noca_0322
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: Noca_0326
symbol: Noca_0326
gene_biotype: protein_coding
description:
  PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; PASTA domain containing protein; KEGG: tfu:Tfu_0109 PASTA.


ensembl_gene_id: Noca_0327
symbol: whiB
gene_biotype: protein_coding
description:
  Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.


ensembl_gene_id: Noca_0328
symbol: Noca_0328
gene_biotype: protein_coding
description:
  Arsenite efflux ATP-binding protein ArsA; PFAM: Anion-transporting ATPase; KEGG: tfu:Tfu_0111 putative ion-transporting ATPase; TC 3.A.4.1.1.


ensembl_gene_id: Noca_0329
symbol: Noca_0329
gene_biotype: protein_coding
description:
  Arsenite efflux ATP-binding protein ArsA; PFAM: Anion-transporting ATPase; KEGG: sco:SCO3577 ion-transporting ATPase; TC 3.A.4.1.1.


ensembl_gene_id: Noca_0330
symbol: Noca_0330
gene_biotype: protein_coding
description:
  3-oxoacid CoA-transferase, A subunit; KEGG: fal:FRAAL3148 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (succinyl CoA:3-oxoacid CoA-transferase) (OXCT A); TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase.


ensembl_gene_id: Noca_0331
symbol: Noca_0331
gene_biotype: protein_coding
description:
  KEGG: fra:Francci3_2503 3-oxoacid CoA-transferase, subunit B; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase.


ensembl_gene_id: Noca_0332
symbol: Noca_0332
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: lxx:Lxx06230 RNA polymerase, sigma factor.


ensembl_gene_id: Noca_0334
symbol: Noca_0334
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: lxx:Lxx06230 RNA polymerase, sigma factor.


ensembl_gene_id: Noca_0339
symbol: Noca_0339
gene_biotype: protein_coding
description:
  PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: tfu:Tfu_0117 cyclic nucleotide-binding:bacterial regulatory protein, Crp.


ensembl_gene_id: Noca_0340
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III / DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: Noca_0343
symbol: Noca_0343
gene_biotype: protein_coding
description:
  PFAM: peptidase S1 and S6, chymotrypsin/Hap; Colicin V production protein; KEGG: fra:Francci3_4292 colicin V production protein.


ensembl_gene_id: Noca_0345
symbol: nhaA1
gene_biotype: protein_coding
description:
  Sodium/proton antiporter, NhaA family; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.


ensembl_gene_id: Noca_0346
symbol: acsA
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: Noca_0347
symbol: Noca_0347
gene_biotype: protein_coding
description:
  TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: sco:SCO1822 putative transmembrane transport protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: Noca_0350
symbol: Noca_0350
gene_biotype: protein_coding
description:
  Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: fra:Francci3_0863 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: Noca_0351
symbol: Noca_0351
gene_biotype: protein_coding
description:
  Assimilatory nitrate reductase (NADH) beta subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: mmc:Mmcs_3231 nitrite reductase (NAD(P)H) large subunit, NirB.


ensembl_gene_id: Noca_0352
symbol: Noca_0352
gene_biotype: protein_coding
description:
  TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: fal:FRAAL1355 nitrite reductase, large subunit, nucleotide-binding.


ensembl_gene_id: Noca_0353
symbol: Noca_0353
gene_biotype: protein_coding
description:
  TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: fra:Francci3_0795 nitrite reductase (NAD(P)H) large subunit, NirD.


ensembl_gene_id: Noca_0354
symbol: Noca_0354
gene_biotype: protein_coding
description:
  PFAM: transcriptional regulator domain protein; Uroporphyrinogen III synthase HEM4; KEGG: sco:SCO2958 uroporphyrinogen-III synthetase.


ensembl_gene_id: Noca_0355
symbol: Noca_0355
gene_biotype: protein_coding
description:
  PFAM: Na+/solute symporter; KEGG: sma:SAV7117 transmembrane transport protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: Noca_0358
symbol: Noca_0358
gene_biotype: protein_coding
description:
  Histidine kinase internal region; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase internal region; KEGG: sma:SAV7118 putative two-component system sensor kinase.


ensembl_gene_id: Noca_0360
symbol: Noca_0360
gene_biotype: protein_coding
description:
  PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mpa:MAP3459 putative methyltransferase.


ensembl_gene_id: Noca_0362
symbol: Noca_0362
gene_biotype: protein_coding
description:
  TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; KEGG: sco:SCO3558 morphological differentiation-associated protein.


ensembl_gene_id: Noca_0370
symbol: Noca_0370
gene_biotype: protein_coding
description:
  PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: sco:SCO3550 putative helicase.


ensembl_gene_id: Noca_0371
symbol: Noca_0371
gene_biotype: protein_coding
description:
  TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: fal:FRAAL6574 anti-sigma-B factor antagonist (anti-anti-sigma-B factor); Belongs to the anti-sigma-factor antagonist family.


ensembl_gene_id: Noca_0372
symbol: hppA
gene_biotype: protein_coding
description:
  V-type H(+)-translocating pyrophosphatase; Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force.


ensembl_gene_id: Noca_0374
symbol: Noca_0374
gene_biotype: protein_coding
description:
  PFAM: methyltransferase small; Methyltransferase type 12; KEGG: sma:SAV4618 rRNA or tRNA methyltransferase; Belongs to the methyltransferase superfamily.


ensembl_gene_id: Noca_0377
symbol: Noca_0377
gene_biotype: protein_coding
description:
  Sigma-70, region 4 type 2; PFAM: regulatory protein, LuxR; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: sma:SAV6340 RNA polymerase ECF-subfamily sigma factor.


ensembl_gene_id: Noca_0378
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: Noca_0379
symbol: Noca_0379
gene_biotype: protein_coding
description:
  Transcriptional regulator, LacI family; PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sco:SCO6349 transcriptional regulator.


ensembl_gene_id: Noca_0381
symbol: Noca_0381
gene_biotype: protein_coding
description:
  L-ribulose 5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein; KEGG: blo:BL0273 L-ribulose-5-phosphate 4-epimerase.


ensembl_gene_id: Noca_0383
symbol: Noca_0383
gene_biotype: protein_coding
description:
  Multiple monosaccharide-binding protein; KEGG: ret:RHE_CH03165 xylose ABC transporter, substrate-binding protein.


ensembl_gene_id: Noca_0384
symbol: Noca_0384
gene_biotype: protein_coding
description:
  Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lxx:Lxx00320 multiple sugar (arabinose, xylose, galactose, glucose, fucose) putative porter; TC 3.A.1.2.-.


ensembl_gene_id: Noca_0385
symbol: Noca_0385
gene_biotype: protein_coding
description:
  Multiple monosaccharide ABC transporter membrane protein; PFAM: inner-membrane translocator; KEGG: sco:SCO2406 putative sugar transport permease; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Noca_0386
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: Noca_0387
symbol: Noca_0387
gene_biotype: protein_coding
description:
  TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: pac:PPA0244 DNA polymerase III delta' subunit.


ensembl_gene_id: Noca_0388
symbol: Noca_0388
gene_biotype: protein_coding
description:
  Tripeptidyl-peptidase B, Serine peptidase, MEROPS family S33; PFAM: alpha/beta hydrolase fold; TAP domain protein; KEGG: sco:SCO3540 proteinase (secreted protein).


ensembl_gene_id: Noca_0392
symbol: Noca_0392
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: csa:Csal_1417 transcriptional regulator, LysR family.


ensembl_gene_id: Noca_0399
symbol: Noca_0399
gene_biotype: protein_coding
description:
  PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: cch:Cag_1641 hypothetical protein.


ensembl_gene_id: Noca_0400
symbol: Noca_0400
gene_biotype: protein_coding
description:
  PFAM: Cupin 2, conserved barrel domain protein; KEGG: btk:BT9727_2719 conserved hypothetical protein, possible polyketide synthesis domain protein.


ensembl_gene_id: Noca_0401
symbol: Noca_0401
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase/reductase SDR; PFAM: class II aldolase/adducin family protein; short-chain dehydrogenase/reductase SDR; KEGG: syn:slr1208 short-chain alcohol dehydrogenase family.


ensembl_gene_id: Noca_0402
symbol: Noca_0402
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: tte:TTE0461 Transcriptional regulator.


ensembl_gene_id: Noca_0403
symbol: mtnA
gene_biotype: protein_coding
description:
  Translation initiation factor 2B subunit I family (IF-2BI); Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: Noca_0404
symbol: Noca_0404
gene_biotype: protein_coding
description:
  Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: ret:RHE_PB00122 probable sugar ABC transporter, substrate-binding protein; TC 3.A.1.2.-.


ensembl_gene_id: Noca_0405
symbol: Noca_0405
gene_biotype: protein_coding
description:
  Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: psp:PSPPH_2279 ABC transporter protein, ATP binding component; TC 3.A.1.2.-.


ensembl_gene_id: Noca_0406
symbol: Noca_0406
gene_biotype: protein_coding
description:
  Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: mlo:mlr7287 ABC transporter, permease protein; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Noca_0407
symbol: mtnK
gene_biotype: protein_coding
description:
  5'-methylthioribose kinase; Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.


ensembl_gene_id: Noca_0409
symbol: Noca_0409
gene_biotype: protein_coding
description:
  PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: rxy:Rxyl_0706 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Noca_0411
symbol: Noca_0411
gene_biotype: protein_coding
description:
  PFAM: Vitamin K epoxide reductase; KEGG: blo:BL0088 narrowly conserved hypothetical transmembrane protein.


ensembl_gene_id: Noca_0414
symbol: Noca_0414
gene_biotype: protein_coding
description:
  PFAM: peptidase S15; X-Pro dipeptidyl-peptidase C-terminal domain protein; KEGG: nfa:nfa43000 putative esterase.


ensembl_gene_id: Noca_0422
symbol: Noca_0422
gene_biotype: protein_coding
description:
  TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: fra:Francci3_0236 modification methylase, HemK family.


ensembl_gene_id: Noca_0425
symbol: Noca_0425
gene_biotype: protein_coding
description:
  PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: rha:RHA1_ro03045 probable NADH-dependent flavin oxidoreductase.


ensembl_gene_id: Noca_0427
symbol: Noca_0427
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4362 short-chain dehydrogenase/reductase SDR.


ensembl_gene_id: Noca_0431
symbol: Noca_0431
gene_biotype: protein_coding
description:
  TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: sma:SAV1635 hypothetical protein.


ensembl_gene_id: Noca_0432
symbol: Noca_0432
gene_biotype: protein_coding
description:
  RNA polymerase, sigma subunit, ECF family; PFAM: DNA gyrase C-terminal repeat, beta-propeller; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: sco:SCO2742 putative sigma factor.


ensembl_gene_id: Noca_0433
symbol: Noca_0433
gene_biotype: protein_coding
description:
  TIGRFAM: ABC transporter, periplasmic binding protein, thiB subfamily; PFAM: extracellular solute-binding protein, family 1; KEGG: sco:SCO5646 putative solute binding lipoprotein.


ensembl_gene_id: Noca_0434
symbol: Noca_0434
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO5647 ABC transporter integral membrane protein.


ensembl_gene_id: Noca_0435
symbol: Noca_0435
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO5648 ABC transporter ATP binding protein.


ensembl_gene_id: Noca_0437
symbol: Noca_0437
gene_biotype: protein_coding
description:
  PFAM: acyl-CoA oxidase domain protein; acyl-CoA dehydrogenase domain protein; KEGG: tfu:Tfu_2239 hypothetical protein.


ensembl_gene_id: Noca_0438
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic diphosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: Noca_0439
symbol: Noca_0439
gene_biotype: protein_coding
description:
  TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13, D-Ala-D-Ala carboxypeptidase C; KEGG: sma:SAV4662 D-alanyl-D-alanine carboxypeptidase.


ensembl_gene_id: Noca_0441
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: Noca_0443
symbol: Noca_0443
gene_biotype: protein_coding
description:
  KEGG: sco:SCO3405 putative hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: Noca_0444
symbol: ftsH
gene_biotype: protein_coding
description:
  Membrane protease FtsH catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: Noca_0446
symbol: Noca_0446
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: Noca_0447
symbol: Noca_0447
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: Noca_0448
symbol: Noca_0448
gene_biotype: protein_coding
description:
  KEGG: sco:SCO3401 putative hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK.


ensembl_gene_id: Noca_0452
symbol: Noca_0452
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV7409 putative ABC transporter ATP-binding protein.


ensembl_gene_id: Noca_0453
symbol: Noca_0453
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV7406 putative ABC transporter permease protein.


ensembl_gene_id: Noca_0454
symbol: Noca_0454
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fal:FRAAL6728 putative ABC transporter permease protein.


ensembl_gene_id: Noca_0455
symbol: Noca_0455
gene_biotype: protein_coding
description:
  PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: fal:FRAAL6729 putative amino acid ABC transporter amino acid-binding protein.


ensembl_gene_id: Noca_0460
symbol: panC
gene_biotype: protein_coding
description:
  Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: Noca_0461
symbol: panD
gene_biotype: protein_coding
description:
  L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: Noca_0463
symbol: Noca_0463
gene_biotype: protein_coding
description:
  KEGG: fra:Francci3_4378 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; Belongs to the NadC/ModD family.


ensembl_gene_id: Noca_0464
symbol: coaX
gene_biotype: protein_coding
description:
  Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis; Belongs to the type III pantothenate kinase family.


ensembl_gene_id: Noca_0466
symbol: Noca_0466
gene_biotype: protein_coding
description:
  PFAM: UvrB/UvrC protein; AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: sma:SAV4697 putative ATP-dependent Clp protease; Belongs to the ClpA/ClpB family.


ensembl_gene_id: Noca_0467
symbol: Noca_0467
gene_biotype: protein_coding
description:
  HhH-GPD family protein; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; KEGG: sco:SCO3355 putative adenine glycosylase.


ensembl_gene_id: Noca_0469
symbol: disA
gene_biotype: protein_coding
description:
  Protein of unknown function DUF147; Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP likely acts as a signaling molecule that may couple DNA integrity with a cellular process.


ensembl_gene_id: Noca_0470
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: Noca_0471
symbol: Noca_0471
gene_biotype: protein_coding
description:
  Transcriptional regulator, LacI family; PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sth:STH770 LacI family transcriptional repressor.


ensembl_gene_id: Noca_0472
symbol: Noca_0472
gene_biotype: protein_coding
description:
  PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rha:RHA1_ro06583 hypothetical protein.


ensembl_gene_id: Noca_0478
symbol: Noca_0478
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nfa:nfa19890 putative ABC transporter ATP-binding protein.


ensembl_gene_id: Noca_0481
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: Noca_0482
symbol: Noca_0482
gene_biotype: protein_coding
description:
  KEGG: sma:SAV4725 putative tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase, class Ib.


ensembl_gene_id: Noca_0484
symbol: Noca_0484
gene_biotype: protein_coding
description:
  TIGRFAM: DNA binding domain, excisionase family; PFAM: Prophage CP4-57 regulatory; KEGG: cef:CE0431 hypothetical protein.


ensembl_gene_id: Noca_0486
symbol: Noca_0486
gene_biotype: protein_coding
description:
  PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: fra:Francci3_0479 NAD-dependent epimerase/dehydratase.


ensembl_gene_id: Noca_0489
symbol: Noca_0489
gene_biotype: protein_coding
description:
  PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: sma:SAV4735 RNA polymerase ECF-subfamily sigma factor.


ensembl_gene_id: Noca_0490
symbol: Noca_0490
gene_biotype: protein_coding
description:
  TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sma:SAV4736 3-phosphoserine phosphatase.


ensembl_gene_id: Noca_0493
symbol: rex
gene_biotype: protein_coding
description:
  CoA-binding domain protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: Noca_0494
symbol: hemA1
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: Noca_0495
symbol: hemC
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: Noca_0496
symbol: Noca_0496
gene_biotype: protein_coding
description:
  uroporphyrinogen-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; KEGG: sco:SCO3317 putative uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase.


ensembl_gene_id: Noca_0497
symbol: Noca_0497
gene_biotype: protein_coding
description:
  Porphobilinogen synthase; PFAM: delta-aminolevulinic acid dehydratase; KEGG: sma:SAV4742 putative 5-aminolevulinic acid dehydratase; Belongs to the ALAD family.


ensembl_gene_id: Noca_0499
symbol: hemL
gene_biotype: protein_coding
description:
  TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; KEGG: sma:SAV4795 putative glutamate-1-semialdehyde 2,1-aminotransferase.


ensembl_gene_id: Noca_0502
symbol: Noca_0502
gene_biotype: protein_coding
description:
  PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: sco:SCO4473 putative cytochrome biogenesis related protein.


ensembl_gene_id: Noca_0507
symbol: menA
gene_biotype: protein_coding
description:
  1,4-dihydroxy-2-naphtoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.


ensembl_gene_id: Noca_0508
symbol: Noca_0508
gene_biotype: protein_coding
description:
  PFAM: AMP-dependent synthetase and ligase; KEGG: tfu:Tfu_1408 putative ortho-succinylbenzoate-CoA synthetase.


ensembl_gene_id: Noca_0509
symbol: menC
gene_biotype: protein_coding
description:
  Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).


ensembl_gene_id: Noca_0510
symbol: menD
gene_biotype: protein_coding
description:
  2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC).


ensembl_gene_id: Noca_0511
symbol: Noca_0511
gene_biotype: protein_coding
description:
  Sodium/proton antiporter, CPA1 family; TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: mmc:Mmcs_0521 Na+/H+ antiporter; TC 2.A.36.


ensembl_gene_id: Noca_0513
symbol: Noca_0513
gene_biotype: protein_coding
description:
  PFAM: GCN5-related N-acetyltransferase; KEGG: nfa:nfa41970 putative enoyl-CoA hydratase/isomerase family protein.


ensembl_gene_id: Noca_0516
symbol: Noca_0516
gene_biotype: protein_coding
description:
  TIGRFAM: isochorismate synthases; PFAM: Anthranilate synthase component I and chorismate binding protein; KEGG: tfu:Tfu_1413 isochorismate synthase.


ensembl_gene_id: Noca_0518
symbol: Noca_0518
gene_biotype: protein_coding
description:
  PFAM: Peptidoglycan-binding domain 1 protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: sma:SAV3383 lipoprotein.


ensembl_gene_id: Noca_0519
symbol: menG
gene_biotype: protein_coding
description:
  Demethylmenaquinone methyltransferase / 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).


ensembl_gene_id: Noca_0520
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: Noca_0521
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: Noca_0522
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: Noca_0523
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: Noca_0524
symbol: Noca_0524
gene_biotype: protein_coding
description:
  TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; KEGG: pac:PPA1932 NADH dehydrogenase I chain E.


ensembl_gene_id: Noca_0525
symbol: Noca_0525
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.


ensembl_gene_id: Noca_0526
symbol: Noca_0526
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.


ensembl_gene_id: Noca_0527
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: Noca_0528
symbol: nuoI
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: Noca_0529
symbol: Noca_0529
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: Noca_0530
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: Noca_0531
symbol: Noca_0531
gene_biotype: protein_coding
description:
  KEGG: nfa:nfa26570 putative NADH dehydrogenase I chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I).


ensembl_gene_id: Noca_0532
symbol: Noca_0532
gene_biotype: protein_coding
description:
  KEGG: rha:RHA1_ro05921 probable NADH dehydrogenase subunit M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I).


ensembl_gene_id: Noca_0533
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: Noca_0534
symbol: Noca_0534
gene_biotype: protein_coding
description:
  Trans-hexaprenyltranstransferase; PFAM: Polyprenyl synthetase; KEGG: sco:SCO4583 putative polyprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: Noca_0535
symbol: Noca_0535
gene_biotype: protein_coding
description:
  TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6, transmembrane; KEGG: sma:SAV4873 RarD protein.


ensembl_gene_id: Noca_0536
symbol: Noca_0536
gene_biotype: protein_coding
description:
  PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; KEGG: sma:SAV4876 2-oxoglutarate ferredoxin oxidoreductase, beta subunit.


ensembl_gene_id: Noca_0537
symbol: Noca_0537
gene_biotype: protein_coding
description:
  PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: tfu:Tfu_2674 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit.


ensembl_gene_id: Noca_0538
symbol: Noca_0538
gene_biotype: protein_coding
description:
  TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: mmc:Mmcs_3482 thiosulphate-binding protein.


ensembl_gene_id: Noca_0539
symbol: Noca_0539
gene_biotype: protein_coding
description:
  Sulfate ABC transporter, inner membrane subunit CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import.


ensembl_gene_id: Noca_0540
symbol: Noca_0540
gene_biotype: protein_coding
description:
  TIGRFAM: sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mtc:MT2469 sulfate ABC transporter, permease protein.


ensembl_gene_id: Noca_0541
symbol: cysA
gene_biotype: protein_coding
description:
  Sulfate ABC transporter, ATPase subunit; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.


ensembl_gene_id: Noca_0542
symbol: Noca_0542
gene_biotype: protein_coding
description:
  PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: ccr:CC1928 inosine-uridine preferring nucleoside hydrolase.


ensembl_gene_id: Noca_0543
symbol: Noca_0543
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: rxy:Rxyl_1898 transcriptional regulator, GntR family.


ensembl_gene_id: Noca_0544
symbol: Noca_0544
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: Noca_0545
symbol: rbsK
gene_biotype: protein_coding
description:
  PfkB domain protein; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.


ensembl_gene_id: Noca_0563
symbol: Noca_0563
gene_biotype: protein_coding
description:
  PFAM: phage integrase family protein; KEGG: mmc:Mmcs_4828 phage integrase; Belongs to the 'phage' integrase family.


ensembl_gene_id: Noca_0564
symbol: Noca_0564
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF520; KEGG: mpa:MAP4063c hypothetical protein; Belongs to the UPF0234 family.


ensembl_gene_id: Noca_0574
symbol: moaA
gene_biotype: protein_coding
description:
  GTP cyclohydrolase subunit MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: Noca_0575
symbol: Noca_0575
gene_biotype: protein_coding
description:
  PFAM: oxidoreductase domain protein; NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: mxa:MXAN_2154 NADP oxidoreductase, coenzyme F420-dependent.


ensembl_gene_id: Noca_0576
symbol: Noca_0576
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1486; PFAM: NAD-dependent epimerase/dehydratase; NmrA family protein; protein of unknown function DUF1486; KEGG: nfa:nfa29880 hypothetical protein.


ensembl_gene_id: Noca_0579
symbol: Noca_0579
gene_biotype: protein_coding
description:
  PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: sme:SMa0257 probable methylamine.


ensembl_gene_id: Noca_0582
symbol: Noca_0582
gene_biotype: protein_coding
description:
  PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: rha:RHA1_ro06982 possible insertion sequence ATP-binding protein.


ensembl_gene_id: Noca_0586
symbol: Noca_0586
gene_biotype: protein_coding
description:
  PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: aor:AO090020000701 monoamine oxidase Pfam: FAD_binding_3 HI0933_like FAD_binding_2 GIDA DAO Amino_oxidase.


ensembl_gene_id: Noca_0588
symbol: Noca_0588
gene_biotype: protein_coding
description:
  Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: fal:FRAAL2528 hypothetical protein; TC 3.A.1.2.-.


ensembl_gene_id: Noca_0593
symbol: Noca_0593
gene_biotype: protein_coding
description:
  PFAM: carbon monoxide dehydrogenase subunit G; KEGG: mmc:Mmcs_4601 carbon monoxide dehydrogenase subunit G.


ensembl_gene_id: Noca_0594
symbol: Noca_0594
gene_biotype: protein_coding
description:
  PFAM: molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: rpb:RPB_3113 molybdopterin dehydrogenase, FAD-binding.


ensembl_gene_id: Noca_0596
symbol: Noca_0596
gene_biotype: protein_coding
description:
  Xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: rxy:Rxyl_1872 carbon-monoxide dehydrogenase.


ensembl_gene_id: Noca_0597
symbol: Noca_0597
gene_biotype: protein_coding
description:
  PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: sma:SAV4383 hydrolase.


ensembl_gene_id: Noca_0600
symbol: Noca_0600
gene_biotype: protein_coding
description:
  PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: eba:p2A227 putative integrase; Belongs to the 'phage' integrase family.


ensembl_gene_id: Noca_0606
symbol: Noca_0606
gene_biotype: protein_coding
description:
  PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: gka:GKP18 carbon monoxide dehydrogenase small chain.


ensembl_gene_id: Noca_0610
symbol: Noca_0610
gene_biotype: protein_coding
description:
  Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: fal:FRAAL2526 putative ribose transport system permease protein; putative membrane protein; TC 3.A.1.2.-.


ensembl_gene_id: Noca_0611
symbol: Noca_0611
gene_biotype: protein_coding
description:
  Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fal:FRAAL2527 putative ATP-binding protein of sugar ABC transporter; TC 3.A.1.2.-.


ensembl_gene_id: Noca_0612
symbol: Noca_0612
gene_biotype: protein_coding
description:
  Xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: rxy:Rxyl_1874 carbon-monoxide dehydrogenase.


ensembl_gene_id: Noca_0613
symbol: Noca_0613
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF1100, hydrolase family protein; KEGG: ppu:PP_3195 hypothetical protein; Belongs to the UPF0255 family.


ensembl_gene_id: Noca_0614
symbol: Noca_0614
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF861, cupin_3; Cupin 2, conserved barrel domain protein; KEGG: sma:SAV6269 hypothetical protein.


ensembl_gene_id: Noca_0618
symbol: Noca_0618
gene_biotype: protein_coding
description:
  PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sme:SMa0257 probable methylamine.


ensembl_gene_id: Noca_0620
symbol: Noca_0620
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: sma:SAV4790 LysR-family transcriptional regulator.


ensembl_gene_id: Noca_0622
symbol: Noca_0622
gene_biotype: protein_coding
description:
  PFAM: FAD dependent oxidoreductase; KEGG: fal:FRAAL6023 hypothetical protein; putative signal peptide.


ensembl_gene_id: Noca_0627
symbol: Noca_0627
gene_biotype: protein_coding
description:
  PFAM: small multidrug resistance protein; KEGG: nfa:nfa19760 putative multi-drug efflux transporter.


ensembl_gene_id: Noca_0632
symbol: Noca_0632
gene_biotype: protein_coding
description:
  PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rha:RHA1_ro04979 probable ATPase, MoxR family.


ensembl_gene_id: Noca_0635
symbol: Noca_0635
gene_biotype: protein_coding
description:
  PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: nfa:nfa50890 putative ferredoxin reductase.


ensembl_gene_id: Noca_0636
symbol: Noca_0636
gene_biotype: protein_coding
description:
  PFAM: NADPH-dependent FMN reductase; flavodoxin/nitric oxide synthase; KEGG: mpa:MAP3035 putative Trp repressor binding protein.


ensembl_gene_id: Noca_0637
symbol: Noca_0637
gene_biotype: protein_coding
description:
  PFAM: purine catabolism PurC domain protein; KEGG: mmc:Mmcs_3284 purine catabolism PurC-like protein.


ensembl_gene_id: Noca_0639
symbol: Noca_0639
gene_biotype: protein_coding
description:
  PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; KEGG: sco:SCO1081 putative electron transfer flavoprotein, alpha subunit.


ensembl_gene_id: Noca_0640
symbol: Noca_0640
gene_biotype: protein_coding
description:
  PFAM: electron transfer flavoprotein beta-subunit; KEGG: sco:SCO1082 putative electron transfer flavoprotein, beta subunit.


ensembl_gene_id: Noca_0641
symbol: folD1
gene_biotype: protein_coding
description:
  Methenyltetrahydrofolate cyclohydrolase / 5,10-methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: Noca_0642
symbol: Noca_0642
gene_biotype: protein_coding
description:
  PFAM: FAD dependent oxidoreductase; glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein, C-terminal barrel; KEGG: jan:Jann_2849 FAD dependent oxidoreductase; Belongs to the GcvT family.


ensembl_gene_id: Noca_0644
symbol: Noca_0644
gene_biotype: protein_coding
description:
  PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: mmc:Mmcs_3012 transcriptional regulator, LysR family.


ensembl_gene_id: Noca_0645
symbol: Noca_0645
gene_biotype: protein_coding
description:
  TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; KEGG: mmc:Mmcs_2274 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: Noca_0646
symbol: Noca_0646
gene_biotype: protein_coding
description:
  PFAM: aldehyde dehydrogenase; KEGG: mlo:mll5719 succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: Noca_0647
symbol: Noca_0647
gene_biotype: protein_coding
description:
  D-amino-acid dehydrogenase; PFAM: FAD dependent oxidoreductase; KEGG: rxy:Rxyl_1818 D-amino-acid dehydrogenase.


ensembl_gene_id: Noca_0651
symbol: cpdA
gene_biotype: protein_coding
description:
  Metallophosphoesterase; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.


ensembl_gene_id: Noca_0655
symbol: Noca_0655
gene_biotype: protein_coding
description:
  Fumarylacetoacetate hydrolase; KEGG: rha:RHA1_ro02309 probable fumarylacetoacetase; TIGRFAM: fumarylacetoacetase; PFAM: fumarylacetoacetate (FAA) hydrolase.


ensembl_gene_id: Noca_0657
symbol: Noca_0657
gene_biotype: protein_coding
description:
  PFAM: homogentisate 1,2-dioxygenase; Cupin 2, conserved barrel domain protein; KEGG: rha:RHA1_ro02311 homogentisate 1,2-dioxygenase.


ensembl_gene_id: Noca_0662
symbol: Noca_0662
gene_biotype: protein_coding
description:
  TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: rha:RHA1_ro03039 formate dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: Noca_0663
symbol: Noca_0663
gene_biotype: protein_coding
description:
  PFAM: Pirin domain protein domain protein; Pirin domain protein; KEGG: sco:SCO0468 hypothetical protein; Belongs to the pirin family.


ensembl_gene_id: Noca_0668
symbol: rpmG
gene_biotype: protein_coding
description:
  PFAM: ribosomal protein L33; KEGG: pac:PPA1897 50S ribosomal protein L33 type 2; Belongs to the bacterial ribosomal protein bL33 family.


ensembl_gene_id: Noca_0674
symbol: Noca_0674
gene_biotype: protein_coding
description:
  KEGG: tfu:Tfu_2662 adenosine deaminase; TIGRFAM: adenosine deaminase; PFAM: adenosine/AMP deaminase.


ensembl_gene_id: Noca_0677
symbol: Noca_0677
gene_biotype: protein_coding
description:
  PFAM: amidohydrolase; Amidohydrolase 3; KEGG: rde:RD1_2007 hydroxydechloroatrazine ethylaminohydrolase, putative.


ensembl_gene_id: Noca_0678
symbol: Noca_0678
gene_biotype: protein_coding
description:
  Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpm:BURPS1710b_A1655 ribose ABC transporter, ATP-binding protein; TC 3.A.1.2.-.


ensembl_gene_id: Noca_0679
symbol: Noca_0679
gene_biotype: protein_coding
description:
  Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: hso:HS_0765 ABC-type sugar-binding periplasmic protein; TC 3.A.1.2.-.


ensembl_gene_id: Noca_0680
symbol: Noca_0680
gene_biotype: protein_coding
description:
  Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: rha:RHA1_ro09081 ABC sugar transporter, permease component; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Noca_0681
symbol: Noca_0681
gene_biotype: protein_coding
description:
  Transcriptional regulator, IclR family; PFAM: regulatory proteins, IclR; KEGG: mpa:MAP2738c hypothetical protein.


ensembl_gene_id: Noca_0683
symbol: Noca_0683
gene_biotype: protein_coding
description:
  Rieske (2Fe-2S) domain protein; PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_5458 ring hydroxylating dioxygenase, alpha subunit.


ensembl_gene_id: Noca_0684
symbol: Noca_0684
gene_biotype: protein_coding
description:
  PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1690 aromatic-ring-hydroxylating dioxygenase, beta subunit.


ensembl_gene_id: Noca_0686
symbol: Noca_0686
gene_biotype: protein_coding
description:
  Phthalate 3,4-dioxygenase, ferredoxin reductase subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sma:SAV1609 ferredoxin reductase.


ensembl_gene_id: Noca_0689
symbol: Noca_0689
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dar:Daro_3244 short-chain dehydrogenase/reductase SDR.


ensembl_gene_id: Noca_0690
symbol: Noca_0690
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase/N-acetylneuraminate lyase-like protein; KEGG: jan:Jann_1453 dihydrodipicolinate synthetase.


ensembl_gene_id: Noca_0691
symbol: Noca_0691
gene_biotype: protein_coding
description:
  PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: reu:Reut_B3761 ornithine cyclodeaminase/mu-crystallin.


ensembl_gene_id: Noca_0692
symbol: Noca_0692
gene_biotype: protein_coding
description:
  PFAM: aldehyde dehydrogenase; KEGG: sme:SMa0260 GabD3 succinate-semialdehyde dehdyrogenase; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: Noca_0693
symbol: Noca_0693
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: sco:SCO6309 LysR-family transcriptional regulator.


ensembl_gene_id: Noca_0694
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: Noca_0695
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: Noca_0696
symbol: rplK
gene_biotype: protein_coding
description:
  LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: Noca_0697
symbol: rplA
gene_biotype: protein_coding
description:
  LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: Noca_0698
symbol: rplJ
gene_biotype: protein_coding
description:
  LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: Noca_0699
symbol: rplL
gene_biotype: protein_coding
description:
  LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: Noca_0700
symbol: Noca_0700
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rha:RHA1_ro02744 ABC superfamily, ATP-binding component.


ensembl_gene_id: Noca_0701
symbol: Noca_0701
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF140; KEGG: sma:SAV5901 putative ABC-transporter integral membrane protein.


ensembl_gene_id: Noca_0703
symbol: Noca_0703
gene_biotype: protein_coding
description:
  TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: sma:SAV5899 mce-related protein.


ensembl_gene_id: Noca_0704
symbol: Noca_0704
gene_biotype: protein_coding
description:
  TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: sma:SAV5898 putative secreted protein.


ensembl_gene_id: Noca_0705
symbol: Noca_0705
gene_biotype: protein_coding
description:
  TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: sma:SAV5897 putative secreted protein.


ensembl_gene_id: Noca_0706
symbol: Noca_0706
gene_biotype: protein_coding
description:
  TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: sma:SAV5896 mce-related protein.


ensembl_gene_id: Noca_0707
symbol: Noca_0707
gene_biotype: protein_coding
description:
  TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: sma:SAV5895 putative secreted protein.


ensembl_gene_id: Noca_0708
symbol: Noca_0708
gene_biotype: protein_coding
description:
  TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: sma:SAV5894 putative secreted protein.


ensembl_gene_id: Noca_0711
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: Noca_0714
symbol: Noca_0714
gene_biotype: protein_coding
description:
  TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; tryptophan halogenase; KEGG: rha:RHA1_ro01992 possible dehydrogenase.


ensembl_gene_id: Noca_0717
symbol: Noca_0717
gene_biotype: protein_coding
description:
  Phosphate ABC transporter substrate-binding protein, PhoT family; KEGG: gvi:glr0014 phosphate ABC transporter periplasmic phosphate-binding protein; TC 3.A.1.7.1.


ensembl_gene_id: Noca_0721
symbol: Noca_0721
gene_biotype: protein_coding
description:
  PFAM: glycosyl transferase, family 2; General secretory system II, protein E domain protein; KEGG: ttj:TTHA0743 glycosyltransferase related protein.


ensembl_gene_id: Noca_0723
symbol: Noca_0723
gene_biotype: protein_coding
description:
  PFAM: glycoside hydrolase, family 5; KEGG: sma:SAV1854 endo-1,4-beta-glucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.


ensembl_gene_id: Noca_0724
symbol: Noca_0724
gene_biotype: protein_coding
description:
  PFAM: iron-containing alcohol dehydrogenase; KEGG: rxy:Rxyl_2381 iron-containing alcohol dehydrogenase.


ensembl_gene_id: Noca_0725
symbol: Noca_0725
gene_biotype: protein_coding
description:
  FAD linked oxidase domain protein; PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: rha:RHA1_ro00345 possible oxidoreductase, N-termminal.


ensembl_gene_id: Noca_0730
symbol: serC
gene_biotype: protein_coding
description:
  Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.


ensembl_gene_id: Noca_0733
symbol: Noca_0733
gene_biotype: protein_coding
description:
  PFAM: Citrate synthase; KEGG: sma:SAV3859 putative citrate synthase; Belongs to the citrate synthase family.


ensembl_gene_id: Noca_0734
symbol: pdxH
gene_biotype: protein_coding
description:
  Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).


ensembl_gene_id: Noca_0736
symbol: Noca_0736
gene_biotype: protein_coding
description:
  PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: fal:FRAAL0788 putative ABC phosphate-transporting ATPase.


ensembl_gene_id: Noca_0737
symbol: Noca_0737
gene_biotype: protein_coding
description:
  PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rha:RHA1_ro04170 bifunctional ABC lipid A exporter.


ensembl_gene_id: Noca_0739
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: Noca_0741
symbol: Noca_0741
gene_biotype: protein_coding
description:
  TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: tbd:Tbd_1612 flagellar biosynthesis protein FliR.


ensembl_gene_id: Noca_0742
symbol: fliQ
gene_biotype: protein_coding
description:
  Export protein FliQ, family 3; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: Noca_0743
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: Noca_0745
symbol: Noca_0745
gene_biotype: protein_coding
description:
  TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: tma:TM0680a chemotaxis protein.


ensembl_gene_id: Noca_0746
symbol: Noca_0746
gene_biotype: protein_coding
description:
  PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: tde:TDE2763 flagellar motor switch protein FliM.


ensembl_gene_id: Noca_0747
symbol: Noca_0747
gene_biotype: protein_coding
description:
  Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: Noca_0751
symbol: Noca_0751
gene_biotype: protein_coding
description:
  PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: bha:BH2449 flagellar hook protein.


ensembl_gene_id: Noca_0756
symbol: Noca_0756
gene_biotype: protein_coding
description:
  Type III secretion system ATPase, FliI/YscN; KEGG: lxx:Lxx06360 flagellum-like ATP synthase; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; SMART: AAA ATPase.


ensembl_gene_id: Noca_0759
symbol: Noca_0759
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: Noca_0760
symbol: fliE
gene_biotype: protein_coding
description:
  TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: lxx:Lxx06330 flagellar basal-body protein.


ensembl_gene_id: Noca_0761
symbol: Noca_0761
gene_biotype: protein_coding
description:
  KEGG: lxx:Lxx06310 flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: Noca_0762
symbol: Noca_0762
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: Noca_0765
symbol: Noca_0765
gene_biotype: protein_coding
description:
  Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: Noca_0766
symbol: Noca_0766
gene_biotype: protein_coding
description:
  Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: Noca_0767
symbol: Noca_0767
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: xac:XAC1933 RNA polymerase sigma factor for flagellar operon FliA.


ensembl_gene_id: Noca_0769
symbol: Noca_0769
gene_biotype: protein_coding
description:
  TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: mta:Moth_0746 flagellar hook-associated protein; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: Noca_0770
symbol: Noca_0770
gene_biotype: protein_coding
description:
  TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: mta:Moth_0747 flagellin-like.


ensembl_gene_id: Noca_0771
symbol: fliW
gene_biotype: protein_coding
description:
  Protein of unknown function DUF180; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.


ensembl_gene_id: Noca_0772
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.


ensembl_gene_id: Noca_0775
symbol: Noca_0775
gene_biotype: protein_coding
description:
  PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: tfu:Tfu_0833 alpha amylase, catalytic subdomain.


ensembl_gene_id: Noca_0778
symbol: Noca_0778
gene_biotype: protein_coding
description:
  Deoxyribodipyrimidine photo-lyase type I; PFAM: DNA photolyase, FAD-binding; DNA photolyase domain protein; KEGG: fal:FRAAL0101 deoxyribodipyrimidine photolyase (DNA photolyase) (photoreactivating enzyme).


ensembl_gene_id: Noca_0784
symbol: Noca_0784
gene_biotype: protein_coding
description:
  TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: sma:SAV2240 transcriptional regulator.


ensembl_gene_id: Noca_0785
symbol: Noca_0785
gene_biotype: protein_coding
description:
  PFAM: large-conductance mechanosensitive channel; KEGG: pac:PPA0491 large conductance mechanosensitive channel.


ensembl_gene_id: Noca_0787
symbol: Noca_0787
gene_biotype: protein_coding
description:
  TIGRFAM: putative regulatory protein, FmdB family; KEGG: mmc:Mmcs_4292 putative regulatory protein, FmdB.


ensembl_gene_id: Noca_0790
symbol: Noca_0790
gene_biotype: protein_coding
description:
  PFAM: UTP--glucose-1-phosphate uridylyltransferase; KEGG: pac:PPA0489 UTP--glucose-1-phosphate uridylyltransferase.


ensembl_gene_id: Noca_0791
symbol: Noca_0791
gene_biotype: protein_coding
description:
  Molybdopterin molybdochelatase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: Noca_0792
symbol: moaC
gene_biotype: protein_coding
description:
  GTP cyclohydrolase subunit MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: Noca_0793
symbol: Noca_0793
gene_biotype: protein_coding
description:
  TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; KEGG: sco:SCO3179 molybdenum cofactor biosynthesis protein (putative secreted protein).


ensembl_gene_id: Noca_0794
symbol: Noca_0794
gene_biotype: protein_coding
description:
  PFAM: GCN5-related N-acetyltransferase; KEGG: tfu:Tfu_0377 ribosomal-protein-alanine N-acetyltransferase.


ensembl_gene_id: Noca_0796
symbol: Noca_0796
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rha:RHA1_ro02334 possible 3-oxoacyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Noca_0797
symbol: Noca_0797
gene_biotype: protein_coding
description:
  PFAM: nitroreductase; KEGG: fal:FRAAL2433 putative NADH dehydrogenase (H(2)O(2) forming NADH oxidase) (NADH:oxygen oxidoreductase).


ensembl_gene_id: Noca_0798
symbol: Noca_0798
gene_biotype: protein_coding
description:
  KEGG: sus:Acid_6472 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase.


ensembl_gene_id: Noca_0799
symbol: Noca_0799
gene_biotype: protein_coding
description:
  PFAM: cobalamin B12-binding domain protein; KEGG: pfu:PF1946 methylmalonyl-CoAmutase, subunit alpha.


ensembl_gene_id: Noca_0801
symbol: Noca_0801
gene_biotype: protein_coding
description:
  TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; KEGG: sma:SAV2855 lysine arginine ornithine transport system kinase.


ensembl_gene_id: Noca_0802
symbol: Noca_0802
gene_biotype: protein_coding
description:
  PFAM: Enoyl-CoA hydratase/isomerase; KEGG: fal:FRAAL4766 putative enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Noca_0804
symbol: Noca_0804
gene_biotype: protein_coding
description:
  PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_5189 acyl-CoA dehydrogenase-like protein.


ensembl_gene_id: Noca_0806
symbol: Noca_0806
gene_biotype: protein_coding
description:
  Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: ret:RHE_PC00149 putative sugar ABC transporter, substrate-binding protein; TC 3.A.1.2.-.


ensembl_gene_id: Noca_0807
symbol: Noca_0807
gene_biotype: protein_coding
description:
  Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_L_2027 ABC transporter protein, ATP binding component; TC 3.A.1.2.-.


ensembl_gene_id: Noca_0808
symbol: Noca_0808
gene_biotype: protein_coding
description:
  Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: rha:RHA1_ro08440 probable monosaccharide-transporting ATPase; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Noca_0811
symbol: Noca_0811
gene_biotype: protein_coding
description:
  PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bbr:BB0763 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Noca_0812
symbol: Noca_0812
gene_biotype: protein_coding
description:
  PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bxe:Bxe_C0282 alpha-methylacyl-CoA racemase; Belongs to the CoA-transferase III family.


ensembl_gene_id: Noca_0814
symbol: Noca_0814
gene_biotype: protein_coding
description:
  FO synthase subunit 1; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: nfa:nfa47520 hypothetical protein.


ensembl_gene_id: Noca_0818
symbol: Noca_0818
gene_biotype: protein_coding
description:
  PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rha:RHA1_ro02345 long-chain-acyl-CoA dehydrogenase.


ensembl_gene_id: Noca_0825
symbol: Noca_0825
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase like protein, AhpD family; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: Noca_0826
symbol: Noca_0826
gene_biotype: protein_coding
description:
  Rieske (2Fe-2S) domain protein; PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: rha:RHA1_ro02842 large subunit of ring-hydroxylating dioxygenase.


ensembl_gene_id: Noca_0827
symbol: Noca_0827
gene_biotype: protein_coding
description:
  PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: fal:FRAAL3401 putative dioxygenase component, beta subunit.


ensembl_gene_id: Noca_0832
symbol: Noca_0832
gene_biotype: protein_coding
description:
  PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rfr:Rfer_0300 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.


ensembl_gene_id: Noca_0833
symbol: Noca_0833
gene_biotype: protein_coding
description:
  3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_1701 4-carboxymuconolactone decarboxylase.


ensembl_gene_id: Noca_0834
symbol: Noca_0834
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: mmc:Mmcs_1374 transcriptional regulator, LysR family.


ensembl_gene_id: Noca_0835
symbol: Noca_0835
gene_biotype: protein_coding
description:
  PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: nfa:nfa35210 putative muconate cycloisomerase.


ensembl_gene_id: Noca_0836
symbol: Noca_0836
gene_biotype: protein_coding
description:
  TIGRFAM: catechol 1,2-dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase, N-terminal domain protein; KEGG: mmc:Mmcs_1376 catechol 1,2-dioxygenase.


ensembl_gene_id: Noca_0839
symbol: Noca_0839
gene_biotype: protein_coding
description:
  PFAM: ferric-uptake regulator; KEGG: nfa:nfa3250 putative ferric uptake regulator; Belongs to the Fur family.


ensembl_gene_id: Noca_0841
symbol: Noca_0841
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: bha:BH3167 transcriptional regulator (GntR family).


ensembl_gene_id: Noca_0845
symbol: Noca_0845
gene_biotype: protein_coding
description:
  PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: mes:Meso_4533 mandelate racemase/muconate lactonizing enzyme-like.


ensembl_gene_id: Noca_0846
symbol: Noca_0846
gene_biotype: protein_coding
description:
  PFAM: aldehyde dehydrogenase; KEGG: bxe:Bxe_A3599 betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: Noca_0848
symbol: Noca_0848
gene_biotype: protein_coding
description:
  PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rha:RHA1_ro00742 hypothetical protein.


ensembl_gene_id: Noca_0850
symbol: Noca_0850
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: sco:SCO7702 GntR-family transcriptional regulator.


ensembl_gene_id: Noca_0851
symbol: Noca_0851
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: rxy:Rxyl_0193 extracellular ligand-binding receptor; TC 3.A.1.4.-.


ensembl_gene_id: Noca_0852
symbol: Noca_0852
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; KEGG: mag:amb2873 branched-chain amino acid ABC-type transport system; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Noca_0853
symbol: Noca_0853
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: inner-membrane translocator; KEGG: rxy:Rxyl_0195 inner-membrane translocator; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Noca_0854
symbol: Noca_0854
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpa:BPP2198 putative ABC transport system, ATP-bidning protein; TC 3.A.1.4.-.


ensembl_gene_id: Noca_0855
symbol: Noca_0855
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbr:BB2905 high-affinity branched-chain amino acid transport, ATP-binding protein; TC 3.A.1.4.-.


ensembl_gene_id: Noca_0857
symbol: Noca_0857
gene_biotype: protein_coding
description:
  PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rpb:RPB_0555 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Noca_0858
symbol: Noca_0858
gene_biotype: protein_coding
description:
  PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: reu:Reut_A1835 acyl-CoA dehydrogenase, C-terminal:acyl-CoA dehydrogenase, central region:acyl-CoA dehydrogenase, N-terminal.


ensembl_gene_id: Noca_0859
symbol: Noca_0859
gene_biotype: protein_coding
description:
  PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rxy:Rxyl_0244 L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.


ensembl_gene_id: Noca_0861
symbol: Noca_0861
gene_biotype: protein_coding
description:
  PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: gka:GK2036 3-hydroxybutyryl-CoA dehydrogenase.


ensembl_gene_id: Noca_0863
symbol: Noca_0863
gene_biotype: protein_coding
description:
  FO synthase subunit 1; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: fra:Francci3_0745 conserved hypothetical protein.


ensembl_gene_id: Noca_0864
symbol: Noca_0864
gene_biotype: protein_coding
description:
  TIGRFAM: NADPH-dependent F420 reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE, N-terminal domain protein; KEGG: tfu:Tfu_0970 NADPH-dependent F420 reductase.


ensembl_gene_id: Noca_0868
symbol: Noca_0868
gene_biotype: protein_coding
description:
  PFAM: ROK family protein; KEGG: ret:RHE_CH01552 probable transcriptional regulator protein, ROK family.


ensembl_gene_id: Noca_0869
symbol: Noca_0869
gene_biotype: protein_coding
description:
  PFAM: extracellular solute-binding protein, family 1; KEGG: sme:SMb21221 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor; TC 3.A.1.1.-.


ensembl_gene_id: Noca_0870
symbol: Noca_0870
gene_biotype: protein_coding
description:
  Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mxa:MXAN_7294 putative sugar ABC transporter, permease protein; TC 3.A.1.1.-.


ensembl_gene_id: Noca_0871
symbol: Noca_0871
gene_biotype: protein_coding
description:
  Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21219 putative sugar uptake ABC transporter permease protein; TC 3.A.1.1.-.


ensembl_gene_id: Noca_0874
symbol: Noca_0874
gene_biotype: protein_coding
description:
  PFAM: ferric-uptake regulator; KEGG: rha:RHA1_ro05274 Fe(3+) uptake regulator; Belongs to the Fur family.


ensembl_gene_id: Noca_0875
symbol: katG
gene_biotype: protein_coding
description:
  Catalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.


ensembl_gene_id: Noca_0878
symbol: Noca_0878
gene_biotype: protein_coding
description:
  PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: fal:FRAAL1971 conserved hypothetical protein; putative FMN-binding split barrel domain.


ensembl_gene_id: Noca_0882
symbol: Noca_0882
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV1878 ABC transporter ATP-binding protein.


ensembl_gene_id: Noca_0884
symbol: Noca_0884
gene_biotype: protein_coding
description:
  PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rha:RHA1_ro05624 possible serine protease, C-terminal.


ensembl_gene_id: Noca_0886
symbol: Noca_0886
gene_biotype: protein_coding
description:
  TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; KEGG: rpd:RPD_3003 outer membrane autotransporter barrel.


ensembl_gene_id: Noca_0887
symbol: Noca_0887
gene_biotype: protein_coding
description:
  TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: eli:ELI_10920 hydrolase, haloacid dehalogenase-like family protein.


ensembl_gene_id: Noca_0888
symbol: Noca_0888
gene_biotype: protein_coding
description:
  KEGG: rxy:Rxyl_1676 citrate synthase I; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; Belongs to the citrate synthase family.


ensembl_gene_id: Noca_0889
symbol: rplM
gene_biotype: protein_coding
description:
  LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: Noca_0890
symbol: rpsI
gene_biotype: protein_coding
description:
  PFAM: ribosomal protein S9; KEGG: pac:PPA1802 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.


ensembl_gene_id: Noca_0891
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: Noca_0892
symbol: Noca_0892
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO1742 putative ABC-transporter ATP-binding protein.


ensembl_gene_id: Noca_0896
symbol: glmS
gene_biotype: protein_coding
description:
  Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: Noca_0897
symbol: acpS
gene_biotype: protein_coding
description:
  Holo-acyl-carrier-protein synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: Noca_0899
symbol: nnrD
gene_biotype: protein_coding
description:
  Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...]


ensembl_gene_id: Noca_0900
symbol: Noca_0900
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: Noca_0907
symbol: Noca_0907
gene_biotype: protein_coding
description:
  PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: sma:SAV1697 putative DNA ligase.


ensembl_gene_id: Noca_0908
symbol: glmU
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: Noca_0909
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: Noca_0910
symbol: Noca_0910
gene_biotype: protein_coding
description:
  Membrane alanyl aminopeptidase, Metallo peptidase, MEROPS family M01; TIGRFAM: aminopeptidase N; PFAM: peptidase M1, membrane alanine aminopeptidase; KEGG: sco:SCO2018 putative aminopeptidase.


ensembl_gene_id: Noca_0911
symbol: rplY
gene_biotype: protein_coding
description:
  LSU ribosomal protein L25P; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: Noca_0912
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: Noca_0915
symbol: Noca_0915
gene_biotype: protein_coding
description:
  Phosphate ABC transporter membrane protein 1, PhoT family; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: Noca_0916
symbol: Noca_0916
gene_biotype: protein_coding
description:
  TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fal:FRAAL6533 phosphate ABC transporter permease protein; TC 3.A.1.7.1.


ensembl_gene_id: Noca_0917
symbol: Noca_0917
gene_biotype: protein_coding
description:
  Phosphate ABC transporter substrate-binding protein, PhoT family; TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; KEGG: fal:FRAAL6535 high-affinity phosphate transport protein (ABC superfamily); TC 3.A.1.7.1.


ensembl_gene_id: Noca_0919
symbol: Noca_0919
gene_biotype: protein_coding
description:
  PFAM: peptidase C60, sortase A and B; KEGG: fal:FRAAL2033 putative sortase (surface protein transpeptidase).


ensembl_gene_id: Noca_0920
symbol: Noca_0920
gene_biotype: protein_coding
description:
  KEGG: cya:CYA_1212 phosphate uptake transporter (PhoT) ABC transporter family, substrate-binding protein; TC 3.A.1.7.1.


ensembl_gene_id: Noca_0921
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: Noca_0924
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: Noca_0926
symbol: Noca_0926
gene_biotype: protein_coding
description:
  PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: sma:SAV3537 putative MazG-family transcriptional regulator.


ensembl_gene_id: Noca_0928
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: Noca_0929
symbol: Noca_0929
gene_biotype: protein_coding
description:
  PFAM: Septum formation initiator; KEGG: pac:PPA0546 conserved protein, putative septum formation initiator.


ensembl_gene_id: Noca_0939
symbol: Noca_0939
gene_biotype: protein_coding
description:
  KEGG: rha:RHA1_ro05843 probable cystathionine beta-synthase; TIGRFAM: cystathionine beta-synthase; PFAM: CBS domain containing protein; Pyridoxal-5'-phosphate-dependent enzyme, beta subunit.


ensembl_gene_id: Noca_0942
symbol: Noca_0942
gene_biotype: protein_coding
description:
  PFAM: cytochrome bd ubiquinol oxidase, subunit I; KEGG: lxx:Lxx12300 cytochrome D ubiquinol oxidase subunit I.


ensembl_gene_id: Noca_0943
symbol: Noca_0943
gene_biotype: protein_coding
description:
  TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase, subunit II; KEGG: sco:SCO3946 putative cytochrome oxidase subunit II.


ensembl_gene_id: Noca_0944
symbol: Noca_0944
gene_biotype: protein_coding
description:
  KEGG: sco:SCO3947 putative ABC transporter; TIGRFAM: ABC transporter, transmembrane region, type 1; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase.


ensembl_gene_id: Noca_0945
symbol: Noca_0945
gene_biotype: protein_coding
description:
  PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: fra:Francci3_3253 two component transcriptional regulator, LuxR family.


ensembl_gene_id: Noca_0946
symbol: Noca_0946
gene_biotype: protein_coding
description:
  PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: sco:SCO0203 two-component sensor.


ensembl_gene_id: Noca_0947
symbol: Noca_0947
gene_biotype: protein_coding
description:
  PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: sco:SCO0174 putative DNA-binding protein.


ensembl_gene_id: Noca_0954
symbol: Noca_0954
gene_biotype: protein_coding
description:
  PFAM: glycoside hydrolase, family 31; KEGG: tfu:Tfu_1613 putative alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.


ensembl_gene_id: Noca_0961
symbol: Noca_0961
gene_biotype: protein_coding
description:
  PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mpa:MAP3938c hypothetical protein.


ensembl_gene_id: Noca_0966
symbol: Noca_0966
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: cgb:cg1735 secreted cell wall-associated hydrolase (invasion-associated protein).


ensembl_gene_id: Noca_0968
symbol: Noca_0968
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fal:FRAAL1681 putative ABC transporter, ATP-binding protein.


ensembl_gene_id: Noca_0969
symbol: Noca_0969
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF214; KEGG: fal:FRAAL1680 hypothetical protein; putative membrane protein; putative HPr serine phosphorylation domain.


ensembl_gene_id: Noca_0971
symbol: Noca_0971
gene_biotype: protein_coding
description:
  PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ret:RHE_CH02466 hypothetical protein.


ensembl_gene_id: Noca_0974
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: Noca_0976
symbol: Noca_0976
gene_biotype: protein_coding
description:
  Cystathionine gamma-lyase; PFAM: aminotransferase, class V; Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: tfu:Tfu_0440 cystathionine gamma-synthase.


ensembl_gene_id: Noca_0979
symbol: Noca_0979
gene_biotype: protein_coding
description:
  L-threonine ammonia-lyase; TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; amino acid-binding ACT domain protein; KEGG: sco:SCO4962 threonine dehydratase.


ensembl_gene_id: Noca_0980
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: Noca_0981
symbol: mca
gene_biotype: protein_coding
description:
  LmbE family protein; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily.


ensembl_gene_id: Noca_0983
symbol: Noca_0983
gene_biotype: protein_coding
description:
  Methyltransferase type 12; PFAM: thiopurine S-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: fal:FRAAL2901 putative methyltransferase.


ensembl_gene_id: Noca_0987
symbol: Noca_0987
gene_biotype: protein_coding
description:
  KEGG: tfu:Tfu_0863 pyruvate phosphate dikinase; TIGRFAM: pyruvate, phosphate dikinase; PFAM: PEP-utilizing enzyme; pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile region; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: Noca_0991
symbol: Noca_0991
gene_biotype: protein_coding
description:
  PFAM: CBS domain containing protein; KEGG: mmc:Mmcs_5097 putative signal-transduction protein with CBS domains.


ensembl_gene_id: Noca_0994
symbol: Noca_0994
gene_biotype: protein_coding
description:
  PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: tfu:Tfu_3046 GAF:ATP-binding region, ATPase-like.


ensembl_gene_id: Noca_0998
symbol: Noca_0998
gene_biotype: protein_coding
description:
  TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: ade:Adeh_0468 cation transporting P-type ATPase.


ensembl_gene_id: Noca_1001
symbol: Noca_1001
gene_biotype: protein_coding
description:
  PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: mfa:Mfla_1382 beta-lactamase-like protein.


ensembl_gene_id: Noca_1004
symbol: Noca_1004
gene_biotype: protein_coding
description:
  PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: tfu:Tfu_1311 hypothetical protein.


ensembl_gene_id: Noca_1006
symbol: Noca_1006
gene_biotype: protein_coding
description:
  PFAM: PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: xcv:XCV1708 histidine kinase-response regulator hybrid protein.


ensembl_gene_id: Noca_1011
symbol: Noca_1011
gene_biotype: protein_coding
description:
  TIGRFAM: 4-carboxymuconolactone decarboxylase; PFAM: alpha/beta hydrolase fold; Carboxymuconolactone decarboxylase; KEGG: mmc:Mmcs_1701 4-carboxymuconolactone decarboxylase.


ensembl_gene_id: Noca_1012
symbol: Noca_1012
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: mmc:Mmcs_1366 transcriptional regulator, LysR family.


ensembl_gene_id: Noca_1013
symbol: Noca_1013
gene_biotype: protein_coding
description:
  acetyl-CoA acetyltransferase; KEGG: nfa:nfa35170 putative ayl-CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Noca_1014
symbol: Noca_1014
gene_biotype: protein_coding
description:
  KEGG: mmc:Mmcs_1702 3-oxoacid CoA-transferase, subunit A; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase.


ensembl_gene_id: Noca_1015
symbol: Noca_1015
gene_biotype: protein_coding
description:
  KEGG: mmc:Mmcs_1703 3-oxoacid CoA-transferase, subunit B; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase.


ensembl_gene_id: Noca_1016
symbol: Noca_1016
gene_biotype: protein_coding
description:
  Cysteine--tRNA ligase; PFAM: cysteinyl-tRNA synthetase, class Ia; KEGG: tfu:Tfu_1832 cysteine--tRNA ligase.


ensembl_gene_id: Noca_1019
symbol: Noca_1019
gene_biotype: protein_coding
description:
  PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: sma:SAV4680 two-component system sensor kinase.


ensembl_gene_id: Noca_1020
symbol: Noca_1020
gene_biotype: protein_coding
description:
  PFAM: regulatory protein, LuxR; response regulator receiver; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: nfa:nfa42530 putative two-component system response regulator.


ensembl_gene_id: Noca_1021
symbol: Noca_1021
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tfu:Tfu_1436 ABC-type multidrug transport system ATPase component.


ensembl_gene_id: Noca_1028
symbol: Noca_1028
gene_biotype: protein_coding
description:
  PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: mbu:Mbur_1610 DegT/DnrJ/EryC1/StrS aminotransferase.


ensembl_gene_id: Noca_1033
symbol: Noca_1033
gene_biotype: protein_coding
description:
  PFAM: aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; KEGG: tac:Ta0575 probable aspartate carbamoyltransferase, catalytic chain.


ensembl_gene_id: Noca_1051
symbol: Noca_1051
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: pfl:PFL_4977 site-specific recombinase, phage integrase family; Belongs to the 'phage' integrase family.


ensembl_gene_id: Noca_1052
symbol: Noca_1052
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF255; KEGG: fra:Francci3_3900 protein of unknown function DUF255.


ensembl_gene_id: Noca_1053
symbol: Noca_1053
gene_biotype: protein_coding
description:
  PFAM: aldehyde dehydrogenase; KEGG: fal:FRAAL4279 putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: Noca_1056
symbol: Noca_1056
gene_biotype: protein_coding
description:
  Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: Noca_1057
symbol: Noca_1057
gene_biotype: protein_coding
description:
  PFAM: PhoH family protein; SMART: Nucleotide binding protein, PINc; KEGG: sma:SAV3236 putative ATP-binding protein.


ensembl_gene_id: Noca_1059
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: Noca_1061
symbol: Noca_1061
gene_biotype: protein_coding
description:
  Fumarase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.


ensembl_gene_id: Noca_1063
symbol: Noca_1063
gene_biotype: protein_coding
description:
  Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sco:SCO4240 ABC transporter ATP-binding protein; TC 3.A.1.1.-.


ensembl_gene_id: Noca_1066
symbol: Noca_1066
gene_biotype: protein_coding
description:
  TIGRFAM: fructose-1,6-bisphosphatase, class II; PFAM: GlpX family protein; KEGG: sma:SAV3215 putative glycerol-inducible protein.


ensembl_gene_id: Noca_1067
symbol: Noca_1067
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; KEGG: mmc:Mmcs_2797 ABC transporter related.


ensembl_gene_id: Noca_1068
symbol: Noca_1068
gene_biotype: protein_coding
description:
  NifC-like ABC-type porter; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: Noca_1069
symbol: Noca_1069
gene_biotype: protein_coding
description:
  TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: mmc:Mmcs_0045 molybdenum ABC transporter, periplasmic molybdate-binding protein.


ensembl_gene_id: Noca_1070
symbol: Noca_1070
gene_biotype: protein_coding
description:
  TIGRFAM: DNA binding domain, excisionase family; PFAM: regulatory protein, MerR; TOBE domain protein; KEGG: fal:FRAAL6311 molybdenum binding protein.


ensembl_gene_id: Noca_1073
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: Noca_1074
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: Noca_1075
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: Noca_1076
symbol: Noca_1076
gene_biotype: protein_coding
description:
  Translation factor SUA5; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC, N-terminal domain; KEGG: sco:SCO7360 hypothetical protein; Belongs to the SUA5 family.


ensembl_gene_id: Noca_1078
symbol: Noca_1078
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF195; KEGG: fal:FRAAL6141 hypothetical protein; putative signal peptide; putative DNA recombination protein protein (RmuC-like).


ensembl_gene_id: Noca_1079
symbol: Noca_1079
gene_biotype: protein_coding
description:
  TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: tfu:Tfu_0258 AP endonuclease, family 1:exodeoxyribonuclease III xth.


ensembl_gene_id: Noca_1080
symbol: ychF
gene_biotype: protein_coding
description:
  GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: Noca_1086
symbol: Noca_1086
gene_biotype: protein_coding
description:
  PFAM: type III restriction enzyme, res subunit; KEGG: pac:PPA1612 putative type III restriction enzyme.


ensembl_gene_id: Noca_1088
symbol: Noca_1088
gene_biotype: protein_coding
description:
  PFAM: Resolvase, N-terminal domain; KEGG: bcl:ABC2865 site-specific recombinase for integration and excision.


ensembl_gene_id: Noca_1097
symbol: Noca_1097
gene_biotype: protein_coding
description:
  preQ(0) biosynthesis protein QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.


ensembl_gene_id: Noca_1098
symbol: queE
gene_biotype: protein_coding
description:
  Radical SAM domain protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: Noca_1099
symbol: Noca_1099
gene_biotype: protein_coding
description:
  PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: tma:TM0038 6-pyruvoyltetrahydropterin synthase.


ensembl_gene_id: Noca_1101
symbol: Noca_1101
gene_biotype: protein_coding
description:
  PFAM: helix-turn-helix domain protein; KEGG: fra:Francci3_0807 transcriptional regulator, XRE family.


ensembl_gene_id: Noca_1102
symbol: Noca_1102
gene_biotype: protein_coding
description:
  KEGG: mmc:Mmcs_1430 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member-like protein.


ensembl_gene_id: Noca_1103
symbol: Noca_1103
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF262; protein of unknown function DUF1524 RloF; KEGG: nar:Saro_0260 protein of unknown function DUF1524 RloF.


ensembl_gene_id: Noca_1104
symbol: Noca_1104
gene_biotype: protein_coding
description:
  TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase; KEGG: xfa:XF2728 type I restriction-modification system DNA methylase.


ensembl_gene_id: Noca_1105
symbol: Noca_1105
gene_biotype: protein_coding
description:
  PFAM: restriction modification system DNA specificity domain; KEGG: xfa:XF2726 type I restriction-modification system specificity determinant.


ensembl_gene_id: Noca_1106
symbol: Noca_1106
gene_biotype: protein_coding
description:
  PFAM: restriction modification system DNA specificity domain; KEGG: hpa:HPAG1_0832 HP0790-like protein.


ensembl_gene_id: Noca_1107
symbol: Noca_1107
gene_biotype: protein_coding
description:
  Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.


ensembl_gene_id: Noca_1114
symbol: Noca_1114
gene_biotype: protein_coding
description:
  PFAM: permease for cytosine/purines, uracil, thiamine, allantoin; KEGG: pfl:PFL_5732 cytosine/purine/uracil/thiamine/allantoin permease family protein; Belongs to the purine-cytosine permease (2.A.39) family.


ensembl_gene_id: Noca_1115
symbol: Noca_1115
gene_biotype: protein_coding
description:
  PFAM: aldehyde dehydrogenase; KEGG: mlo:mlr4198 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: Noca_1116
symbol: Noca_1116
gene_biotype: protein_coding
description:
  Succinate semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: mes:Meso_4451 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: Noca_1117
symbol: Noca_1117
gene_biotype: protein_coding
description:
  PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: mca:MCA1204 sensory box histidine kinase/response regulator.


ensembl_gene_id: Noca_1118
symbol: Noca_1118
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: sco:SCO5621 RNA polymerase sigma factor WhiG.


ensembl_gene_id: Noca_1119
symbol: Noca_1119
gene_biotype: protein_coding
description:
  PFAM: peptidase M23B; peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins; KEGG: tfu:Tfu_0368 hypothetical protein.


ensembl_gene_id: Noca_1123
symbol: Noca_1123
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: bpm:BURPS1710b_2168 Hep_Hag family protein/haemagluttinin motif family protein/YadA-like domain protein.


ensembl_gene_id: Noca_1126
symbol: Noca_1126
gene_biotype: protein_coding
description:
  KEGG: rxy:Rxyl_1165 twitching motility protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase.


ensembl_gene_id: Noca_1128
symbol: Noca_1128
gene_biotype: protein_coding
description:
  PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; SMART: AAA ATPase; KEGG: tte:TTE1262 predicted ATPases involved in pili biogenesis, PilB homologs.


ensembl_gene_id: Noca_1130
symbol: Noca_1130
gene_biotype: protein_coding
description:
  KEGG: dra:DR0442 twitching motility protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase.


ensembl_gene_id: Noca_1131
symbol: Noca_1131
gene_biotype: protein_coding
description:
  TIGRFAM: type IV pilus assembly protein PilM; KEGG: ade:Adeh_0641 type IV pilus assembly protein PilM.


ensembl_gene_id: Noca_1136
symbol: Noca_1136
gene_biotype: protein_coding
description:
  PFAM: peptidase A24A, prepilin type IV; peptidase A24A domain protein; KEGG: rxy:Rxyl_1154 peptidase A24A-like protein.


ensembl_gene_id: Noca_1137
symbol: Noca_1137
gene_biotype: protein_coding
description:
  Diguanylate cyclase; KEGG: mag:amb2980 hypothetical 918 kDa protein Y4LL; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.


ensembl_gene_id: Noca_1138
symbol: Noca_1138
gene_biotype: protein_coding
description:
  KEGG: rxy:Rxyl_2783 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.


ensembl_gene_id: Noca_1139
symbol: Noca_1139
gene_biotype: protein_coding
description:
  KEGG: gme:Gmet_0700 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.


ensembl_gene_id: Noca_1140
symbol: Noca_1140
gene_biotype: protein_coding
description:
  PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: sma:SAV6621 hypothetical protein.


ensembl_gene_id: Noca_1142
symbol: Noca_1142
gene_biotype: protein_coding
description:
  Urate oxidase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.


ensembl_gene_id: Noca_1143
symbol: Noca_1143
gene_biotype: protein_coding
description:
  PFAM: Transthyretin; KEGG: nfa:nfa52430 hypothetical protein; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.


ensembl_gene_id: Noca_1154
symbol: Noca_1154
gene_biotype: protein_coding
description:
  PFAM: NUDIX hydrolase; KEGG: sma:SAV3187 putative mutT-like protein; Belongs to the Nudix hydrolase family.


ensembl_gene_id: Noca_1157
symbol: mshB
gene_biotype: protein_coding
description:
  LmbE family protein; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway.


ensembl_gene_id: Noca_1163
symbol: Noca_1163
gene_biotype: protein_coding
description:
  PFAM: glycerate kinase; KEGG: rha:RHA1_ro02573 glycerate kinase; Belongs to the glycerate kinase type-1 family.


ensembl_gene_id: Noca_1164
symbol: Noca_1164
gene_biotype: protein_coding
description:
  PFAM: transferase hexapeptide repeat containing protein; KEGG: rha:RHA1_ro05076 possible carbonic anhydrase.


ensembl_gene_id: Noca_1166
symbol: Noca_1166
gene_biotype: protein_coding
description:
  PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mta:Moth_2268 alcohol dehydrogenase superfamily, zinc-containing.


ensembl_gene_id: Noca_1168
symbol: Noca_1168
gene_biotype: protein_coding
description:
  PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: chy:CHY_0691 2Fe-2S iron-sulfur cluster binding domain.


ensembl_gene_id: Noca_1169
symbol: Noca_1169
gene_biotype: protein_coding
description:
  Xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: rpb:RPB_4416 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding.


ensembl_gene_id: Noca_1173
symbol: Noca_1173
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: mta:Moth_0073 transcriptional regulator, GntR family.


ensembl_gene_id: Noca_1174
symbol: Noca_1174
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: sma:SAV6021 GntR-family transcriptional regulator.


ensembl_gene_id: Noca_1176
symbol: Noca_1176
gene_biotype: protein_coding
description:
  PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rxy:Rxyl_1758 alcohol dehydrogenase, zinc-binding protein.


ensembl_gene_id: Noca_1177
symbol: Noca_1177
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: afu:AF1207 2-deoxy-D-gluconate 3-dehydrogenase (KduD).


ensembl_gene_id: Noca_1179
symbol: Noca_1179
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; KEGG: hma:rrnAC2468 branched chain amino acid transporter permease protein; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Noca_1180
symbol: Noca_1180
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: inner-membrane translocator; KEGG: csa:Csal_1419 inner-membrane translocator; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Noca_1181
symbol: Noca_1181
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tfu:Tfu_1184 branched-chain amino acid transport system ATP-binding protein; TC 3.A.1.4.-.


ensembl_gene_id: Noca_1182
symbol: Noca_1182
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_4428 ABC transporter related; TC 3.A.1.4.-.


ensembl_gene_id: Noca_1183
symbol: Noca_1183
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter substrate-binding protein, HAAT family; KEGG: bpa:BPP2107 putative ABC transport system, solute-binding protein; TC 3.A.1.4.-.


ensembl_gene_id: Noca_1185
symbol: Noca_1185
gene_biotype: protein_coding
description:
  Pyruvate, water dikinase; PFAM: pyruvate phosphate dikinase, PEP/pyruvate-binding; KEGG: mka:MK0252 phosphoenolpyruvate synthase/pyruvate phosphate dikinase.


ensembl_gene_id: Noca_1186
symbol: Noca_1186
gene_biotype: protein_coding
description:
  PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: afu:AF0091 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (HpcE-1).


ensembl_gene_id: Noca_1187
symbol: Noca_1187
gene_biotype: protein_coding
description:
  PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rxy:Rxyl_2236 antibiotic biosynthesis monooxygenase.


ensembl_gene_id: Noca_1188
symbol: Noca_1188
gene_biotype: protein_coding
description:
  PFAM: aldehyde dehydrogenase; KEGG: rha:RHA1_ro00658 succinate-semialdehyde dehydrogenase (NAD(P)+).


ensembl_gene_id: Noca_1189
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 2 subfamily.


ensembl_gene_id: Noca_1192
symbol: Noca_1192
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin, iron-sulfur binding domain protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: Noca_1193
symbol: Noca_1193
gene_biotype: protein_coding
description:
  Succinyldiaminopimelate aminotransferase apoenzyme; PFAM: aminotransferase, class I and II; KEGG: tfu:Tfu_0492 aspartate aminotransferase.


ensembl_gene_id: Noca_1195
symbol: dapD
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA.


ensembl_gene_id: Noca_1198
symbol: ileS
gene_biotype: protein_coding
description:
  Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.


ensembl_gene_id: Noca_1200
symbol: Noca_1200
gene_biotype: protein_coding
description:
  TIGRFAM: succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: tfu:Tfu_0495 succinyl-diaminopimelate desuccinylase.


ensembl_gene_id: Noca_1201
symbol: Noca_1201
gene_biotype: protein_coding
description:
  PFAM: conserved hypothetical protein 730; KEGG: sco:SCO5140 hypothetical protein; Belongs to the LOG family.


ensembl_gene_id: Noca_1206
symbol: Noca_1206
gene_biotype: protein_coding
description:
  PFAM: PaaX domain protein; PaaX domain protein, C-terminal domain; KEGG: sth:STH211 transcriptional regulatory protein, repressor-type.


ensembl_gene_id: Noca_1207
symbol: pepA
gene_biotype: protein_coding
description:
  Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: Noca_1209
symbol: Noca_1209
gene_biotype: protein_coding
description:
  PFAM: O-methyltransferase, family 3; Methyltransferase type 11; KEGG: fal:FRAAL6092 methyltransferase (O-methyltransferase).


ensembl_gene_id: Noca_1210
symbol: Noca_1210
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 29 subunit, SigE; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: sma:SAV3117 putative RNA polymerase ECF-subfamily sigma factor.


ensembl_gene_id: Noca_1212
symbol: Noca_1212
gene_biotype: protein_coding
description:
  PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: fra:Francci3_0069 peptidase S1 and S6, chymotrypsin/Hap.


ensembl_gene_id: Noca_1213
symbol: Noca_1213
gene_biotype: protein_coding
description:
  TIGRFAM: DNA binding domain, excisionase family; PFAM: regulatory protein, MerR; KEGG: fra:Francci3_0771 putative transcriptional regulator.


ensembl_gene_id: Noca_1218
symbol: Noca_1218
gene_biotype: protein_coding
description:
  Diacylglycerol O-acyltransferase; PFAM: protein of unknown function UPF0089; KEGG: rha:RHA1_ro06332 hypothetical protein; Belongs to the long-chain O-acyltransferase family.


ensembl_gene_id: Noca_1224
symbol: kynA
gene_biotype: protein_coding
description:
  Tryptophan 2,3-dioxygenase apoenzyme / Tryptophan 2,3-dioxygenase holoenzyme; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.


ensembl_gene_id: Noca_1226
symbol: Noca_1226
gene_biotype: protein_coding
description:
  PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_4445 ABC transporter related.


ensembl_gene_id: Noca_1227
symbol: Noca_1227
gene_biotype: protein_coding
description:
  PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_4444 ABC transporter related.


ensembl_gene_id: Noca_1232
symbol: Noca_1232
gene_biotype: protein_coding
description:
  PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: rha:RHA1_ro06221 possible dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Noca_1233
symbol: Noca_1233
gene_biotype: protein_coding
description:
  PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: fra:Francci3_0182 glyoxalase/bleomycin resistance protein/dioxygenase.


ensembl_gene_id: Noca_1234
symbol: ku
gene_biotype: protein_coding
description:
  DNA end-binding protein Ku; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.


ensembl_gene_id: Noca_1240
symbol: Noca_1240
gene_biotype: protein_coding
description:
  PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sma:SAV3481 two-component system response regulator.


ensembl_gene_id: Noca_1241
symbol: Noca_1241
gene_biotype: protein_coding
description:
  PFAM: histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: tfu:Tfu_2550 ATP-binding region, ATPase-like:histidine kinase A, N-terminal.


ensembl_gene_id: Noca_1242
symbol: Noca_1242
gene_biotype: protein_coding
description:
  TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sco:SCO2843 putative N-acetylglucosamine-6-phosphate deacetylase; Belongs to the HAD-like hydrolase superfamily.


ensembl_gene_id: Noca_1247
symbol: Noca_1247
gene_biotype: protein_coding
description:
  Conserved carboxylase region; PFAM: pyruvate carboxyltransferase; Conserved carboxylase region; KEGG: sus:Acid_6961 conserved carboxylase region.


ensembl_gene_id: Noca_1251
symbol: Noca_1251
gene_biotype: protein_coding
description:
  PFAM: Fibronectin, type III domain protein; KEGG: mbo:Mb0063 possible cellulase CelA1 (endoglucanase) (endo-1,4-beta-glucanase) (fi-cmcase) (carboxymethyl cellulase); Belongs to the glycosyl hydrolase family 6.


ensembl_gene_id: Noca_1252
symbol: Noca_1252
gene_biotype: protein_coding
description:
  PFAM: type II secretion system protein E; KEGG: fal:FRAAL1319 putative type II/type IV pathway secretion protein.


ensembl_gene_id: Noca_1260
symbol: Noca_1260
gene_biotype: protein_coding
description:
  PFAM: Allergen V5/Tpx-1 family protein; KEGG: cac:CAC2230 uncharacterized protein of PR1 family, YkwD B.subtilis ortholog.


ensembl_gene_id: Noca_1262
symbol: Noca_1262
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_A2026 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.


ensembl_gene_id: Noca_1263
symbol: Noca_1263
gene_biotype: protein_coding
description:
  PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; KEGG: sma:SAV3185 magnesium or manganese-dependent protein phosphatase.


ensembl_gene_id: Noca_1264
symbol: prfB
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 2 (bRF-2); Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: Noca_1267
symbol: Noca_1267
gene_biotype: protein_coding
description:
  PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: dra:DR0933 alpha-amlyase.


ensembl_gene_id: Noca_1268
symbol: ftsE
gene_biotype: protein_coding
description:
  Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: Noca_1269
symbol: Noca_1269
gene_biotype: protein_coding
description:
  Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: Noca_1272
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: Noca_1274
symbol: Noca_1274
gene_biotype: protein_coding
description:
  Transcriptional regulator, ArsR family; PFAM: regulatory protein, ArsR; KEGG: mlo:mll3559 probable transcription regulator.


ensembl_gene_id: Noca_1275
symbol: Noca_1275
gene_biotype: protein_coding
description:
  PFAM: bifunctional deaminase-reductase domain protein; KEGG: fal:FRAAL4597 putative DNA binding protein.


ensembl_gene_id: Noca_1285
symbol: Noca_1285
gene_biotype: protein_coding
description:
  PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: sma:SAV7008 putative 3-oxoacyl-ACP reductase.


ensembl_gene_id: Noca_1289
symbol: Noca_1289
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF179; KEGG: sma:SAV5129 putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family.


ensembl_gene_id: Noca_1291
symbol: Noca_1291
gene_biotype: protein_coding
description:
  PFAM: type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: sma:SAV5140 protein involving differentiation.


ensembl_gene_id: Noca_1292
symbol: Noca_1292
gene_biotype: protein_coding
description:
  SMART: regulatory proteins, IclR; KEGG: sma:SAV5141 differentiation regulon (IclR-family transcriptional regulator).


ensembl_gene_id: Noca_1293
symbol: Noca_1293
gene_biotype: protein_coding
description:
  Chemotaxis sensory transducer; PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: aba:Acid345_1672 methyl-accepting chemotaxis sensory transducer.


ensembl_gene_id: Noca_1295
symbol: Noca_1295
gene_biotype: protein_coding
description:
  KEGG: rha:RHA1_ro03041 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase.


ensembl_gene_id: Noca_1297
symbol: Noca_1297
gene_biotype: protein_coding
description:
  Transcriptional regulator, MarR family; PFAM: regulatory protein, MarR; KEGG: rha:RHA1_ro05520 possible transcriptional regulator, MarR family.


ensembl_gene_id: Noca_1299
symbol: Noca_1299
gene_biotype: protein_coding
description:
  PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: sco:SCO2015 putative nucleotidase; Belongs to the 5'-nucleotidase family.


ensembl_gene_id: Noca_1303
symbol: Noca_1303
gene_biotype: protein_coding
description:
  Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: extracellular solute-binding protein, family 1; KEGG: pac:PPA1966 bacterial extracellular solute-binding protein; TC 3.A.1.1.-.


ensembl_gene_id: Noca_1304
symbol: Noca_1304
gene_biotype: protein_coding
description:
  Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pac:PPA1965 binding-protein-dependent transport permease; TC 3.A.1.1.-.


ensembl_gene_id: Noca_1305
symbol: Noca_1305
gene_biotype: protein_coding
description:
  Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pac:PPA1964 binding-protein-dependent transport permease; TC 3.A.1.1.-.


ensembl_gene_id: Noca_1307
symbol: Noca_1307
gene_biotype: protein_coding
description:
  Putative nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: Noca_1311
symbol: Noca_1311
gene_biotype: protein_coding
description:
  Molybdopterin synthase subunit MoaD; PFAM: thiamineS protein; KEGG: rha:RHA1_ro01437 possible molybdopterin biosynthesis protein.


ensembl_gene_id: Noca_1312
symbol: Noca_1312
gene_biotype: protein_coding
description:
  KEGG: tfu:Tfu_2368 cysteine synthase K/M; TIGRFAM: cysteine synthases; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit.


ensembl_gene_id: Noca_1313
symbol: Noca_1313
gene_biotype: protein_coding
description:
  PAS sensor protein; KEGG: tbd:Tbd_2428 putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; SMART: PAC repeat-containing protein.


ensembl_gene_id: Noca_1314
symbol: Noca_1314
gene_biotype: protein_coding
description:
  PFAM: sulfatase; type I phosphodiesterase/nucleotide pyrophosphatase; metalloenzyme domain protein; KEGG: bfr:BF3778 hypothetical protein.


ensembl_gene_id: Noca_1318
symbol: Noca_1318
gene_biotype: protein_coding
description:
  PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: tfu:Tfu_2233 regulatory protein, LuxR:response regulator receiver.


ensembl_gene_id: Noca_1319
symbol: Noca_1319
gene_biotype: protein_coding
description:
  PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: sma:SAV1990 two-component system sensor kinase.


ensembl_gene_id: Noca_1323
symbol: rph
gene_biotype: protein_coding
description:
  RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: Noca_1324
symbol: Noca_1324
gene_biotype: protein_coding
description:
  Non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: Noca_1326
symbol: Noca_1326
gene_biotype: protein_coding
description:
  Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sma:SAV5176 putative AhpC/TSA family protein.


ensembl_gene_id: Noca_1327
symbol: Noca_1327
gene_biotype: protein_coding
description:
  PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: sma:SAV3606 putative membrane protein.


ensembl_gene_id: Noca_1329
symbol: Noca_1329
gene_biotype: protein_coding
description:
  TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: sma:SAV3607 putative integral membrane transport protein.


ensembl_gene_id: Noca_1330
symbol: Noca_1330
gene_biotype: protein_coding
description:
  Cobalt ABC transporter, ATPase subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.


ensembl_gene_id: Noca_1332
symbol: Noca_1332
gene_biotype: protein_coding
description:
  Chaperonin Cpn10; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter; Belongs to the GroES chaperonin family.


ensembl_gene_id: Noca_1335
symbol: Noca_1335
gene_biotype: protein_coding
description:
  PFAM: Rieske [2Fe-2S] domain protein; FAD dependent oxidoreductase; KEGG: mpa:MAP1672 hypothetical protein.


ensembl_gene_id: Noca_1336
symbol: Noca_1336
gene_biotype: protein_coding
description:
  TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: rha:RHA1_ro02920 tRNA processing ribonuclease BN.


ensembl_gene_id: Noca_1339
symbol: Noca_1339
gene_biotype: protein_coding
description:
  PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: nfa:nfa23620 putative oxidoreductase.


ensembl_gene_id: Noca_1340
symbol: Noca_1340
gene_biotype: protein_coding
description:
  KEGG: mag:amb1112 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; MASE1 domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.


ensembl_gene_id: Noca_1341
symbol: Noca_1341
gene_biotype: protein_coding
description:
  PFAM: Pirin domain protein domain protein; Pirin domain protein; KEGG: sco:SCO3798 possible chromosome condensation protein; Belongs to the pirin family.


ensembl_gene_id: Noca_1343
symbol: Noca_1343
gene_biotype: protein_coding
description:
  PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; protease-associated PA domain protein; KEGG: cps:CPS_3335 serine protease, subtilase family.


ensembl_gene_id: Noca_1344
symbol: Noca_1344
gene_biotype: protein_coding
description:
  Transcriptional regulator, ArsR family; PFAM: regulatory protein, ArsR; LexA DNA-binding domain protein; KEGG: mpa:MAP2725c hypothetical protein.


ensembl_gene_id: Noca_1345
symbol: Noca_1345
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: sco:SCO0213 putative nitrate/nitrite transporter protein.


ensembl_gene_id: Noca_1346
symbol: Noca_1346
gene_biotype: protein_coding
description:
  TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: sco:SCO6535 putative nitrate reductase alpha chain NarG; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: Noca_1348
symbol: Noca_1348
gene_biotype: protein_coding
description:
  TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase, delta subunit; KEGG: nfa:nfa45510 putative nitrate reductase delta subunit.


ensembl_gene_id: Noca_1349
symbol: Noca_1349
gene_biotype: protein_coding
description:
  TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase, gamma subunit; KEGG: mbo:Mb1765c probable nitrate reductase NarX.


ensembl_gene_id: Noca_1350
symbol: Noca_1350
gene_biotype: protein_coding
description:
  PFAM: Hemerythrin HHE cation binding domain protein; KEGG: mmc:Mmcs_5288 hemerythrin HHE cation binding region.


ensembl_gene_id: Noca_1351
symbol: orn
gene_biotype: protein_coding
description:
  Exonuclease, RNase T and DNA polymerase III; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family.


ensembl_gene_id: Noca_1352
symbol: Noca_1352
gene_biotype: protein_coding
description:
  PFAM: DoxX family protein; KEGG: fal:FRAAL1525 hypothetical protein; putative membrane protein; putative DoxD-like domain.


ensembl_gene_id: Noca_1355
symbol: Noca_1355
gene_biotype: protein_coding
description:
  KEGG: sma:SAV2595 putative adenosine deaminase; TIGRFAM: adenosine deaminase; PFAM: adenosine/AMP deaminase.


ensembl_gene_id: Noca_1356
symbol: Noca_1356
gene_biotype: protein_coding
description:
  PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: mmc:Mmcs_1056 two component transcriptional regulator, LuxR family.


ensembl_gene_id: Noca_1364
symbol: Noca_1364
gene_biotype: protein_coding
description:
  Xaa-Pro aminopeptidase; PFAM: peptidase M24; peptidase M24B, X-Pro dipeptidase/aminopeptidase domain protein; KEGG: tfu:Tfu_1744 Xaa-Pro aminopeptidase; Belongs to the peptidase M24B family.


ensembl_gene_id: Noca_1368
symbol: Noca_1368
gene_biotype: protein_coding
description:
  TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: lxx:Lxx12825 single-strand DNA-binding protein.


ensembl_gene_id: Noca_1369
symbol: Noca_1369
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pac:PPA1636 ABC transporter ATP-binding protein.


ensembl_gene_id: Noca_1371
symbol: Noca_1371
gene_biotype: protein_coding
description:
  KEGG: sma:SAV3512 putative thiolase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Noca_1372
symbol: Noca_1372
gene_biotype: protein_coding
description:
  PFAM: regulatory protein, TetR; KEGG: ade:Adeh_2880 putative transcriptional regulator, TetR family.


ensembl_gene_id: Noca_1373
symbol: Noca_1373
gene_biotype: protein_coding
description:
  PFAM: acyl-ACP thioesterase; thioesterase superfamily protein; KEGG: sco:SCO2676 hypothetical protein.


ensembl_gene_id: Noca_1381
symbol: Noca_1381
gene_biotype: protein_coding
description:
  Membrane alanyl aminopeptidase, Metallo peptidase, MEROPS family M01; TIGRFAM: aminopeptidase N; PFAM: peptidase M1, membrane alanine aminopeptidase; KEGG: sco:SCO2643 aminopeptidase N.


ensembl_gene_id: Noca_1382
symbol: Noca_1382
gene_biotype: protein_coding
description:
  TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: rxy:Rxyl_2688 chromate transporter.


ensembl_gene_id: Noca_1386
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: Noca_1390
symbol: Noca_1390
gene_biotype: protein_coding
description:
  PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: sco:SCO3051 acyl-CoA dehydrogenase.


ensembl_gene_id: Noca_1392
symbol: Noca_1392
gene_biotype: protein_coding
description:
  TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; KEGG: cya:CYA_2836 sensory box histidine kinase/response regulator.


ensembl_gene_id: Noca_1393
symbol: Noca_1393
gene_biotype: protein_coding
description:
  PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: fal:FRAAL5992 SigH putative RNA polymerase sigma factor.


ensembl_gene_id: Noca_1395
symbol: Noca_1395
gene_biotype: protein_coding
description:
  TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: pac:PPA1699 cell envelope-related transcriptional attenuator.


ensembl_gene_id: Noca_1396
symbol: Noca_1396
gene_biotype: protein_coding
description:
  Diacylglycerol O-acyltransferase; PFAM: protein of unknown function UPF0089; KEGG: rha:RHA1_ro00024 hypothetical protein; Belongs to the long-chain O-acyltransferase family.


ensembl_gene_id: Noca_1398
symbol: Noca_1398
gene_biotype: protein_coding
description:
  TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: tfu:Tfu_0017 cell envelope-related transcriptional attenuator.


ensembl_gene_id: Noca_1405
symbol: Noca_1405
gene_biotype: protein_coding
description:
  PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; FG-GAP repeat protein; SMART: Animal peptidoglycan recognition protein PGRP; KEGG: sma:SAV5036 hypothetical protein.


ensembl_gene_id: Noca_1407
symbol: Noca_1407
gene_biotype: protein_coding
description:
  Mannose-6-phosphate isomerase, type 2; PFAM: Nucleotidyl transferase; KEGG: lxx:Lxx04570 mannose-1-phosphate guanylyltransferase.


ensembl_gene_id: Noca_1409
symbol: Noca_1409
gene_biotype: protein_coding
description:
  TIGRFAM: F420-dependent oxidoreductase, putative; PFAM: protein of unknown function DUF129; KEGG: tfu:Tfu_2518 hypothetical protein.


ensembl_gene_id: Noca_1410
symbol: Noca_1410
gene_biotype: protein_coding
description:
  LPPG:FO 2-phospho-L-lactate transferase; TIGRFAM: LPPG; PFAM: protein of unknown function UPF0052 and CofD; KEGG: sco:SCO3036 LPPG:FO 2-phopspho-L-lactate transferase.


ensembl_gene_id: Noca_1414
symbol: Noca_1414
gene_biotype: protein_coding
description:
  PFAM: ornithine cyclodeaminase/mu-crystallin; Shikimate/quinate 5-dehydrogenase; KEGG: eca:ECA2039 putative ornithine cyclodeaminase.


ensembl_gene_id: Noca_1417
symbol: Noca_1417
gene_biotype: protein_coding
description:
  Dihydroorotase; PFAM: amidohydrolase; D-aminoacylase domain protein; Amidohydrolase 3; KEGG: mta:Moth_1302 N-acyl-D-amino-acid deacylase.


ensembl_gene_id: Noca_1418
symbol: Noca_1418
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B0418 ABC sugar transporter, inner membrane subunit; TC 3.A.1.1.-.


ensembl_gene_id: Noca_1419
symbol: Noca_1419
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B0419 ABC sugar transporter, inner membrane subunit; TC 3.A.1.1.-.


ensembl_gene_id: Noca_1420
symbol: Noca_1420
gene_biotype: protein_coding
description:
  PFAM: extracellular solute-binding protein, family 1; KEGG: bmb:BruAb2_0484 sugar ABC transporter, periplasmic sugar-binding protein; TC 3.A.1.1.-.


ensembl_gene_id: Noca_1425
symbol: Noca_1425
gene_biotype: protein_coding
description:
  Phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: sco:SCO3028 phosphomannomutase.


ensembl_gene_id: Noca_1426
symbol: Noca_1426
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF343; KEGG: sma:SAV5049 hypothetical protein; Belongs to the UPF0434 family.


ensembl_gene_id: Noca_1429
symbol: Noca_1429
gene_biotype: protein_coding
description:
  Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.


ensembl_gene_id: Noca_1430
symbol: Noca_1430
gene_biotype: protein_coding
description:
  PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: pai:PAE0596 metallo cofactor biosynthesis protein.


ensembl_gene_id: Noca_1432
symbol: ahcY
gene_biotype: protein_coding
description:
  Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: Noca_1433
symbol: Noca_1433
gene_biotype: protein_coding
description:
  PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sco:SCO3013 putative two-component system response regulator.


ensembl_gene_id: Noca_1434
symbol: Noca_1434
gene_biotype: protein_coding
description:
  PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: sco:SCO3012 putative two-component system histidine kinase.


ensembl_gene_id: Noca_1437
symbol: hpf
gene_biotype: protein_coding
description:
  Sigma 54 modulation protein / SSU ribosomal protein S30P; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: Noca_1438
symbol: Noca_1438
gene_biotype: protein_coding
description:
  PFAM: regulatory protein, LuxR; response regulator receiver; Bacterio-opsin activator, HTH domain protein; KEGG: sma:SAV5068 putative two-component system response regulator.


ensembl_gene_id: Noca_1440
symbol: secA
gene_biotype: protein_coding
description:
  Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: Noca_1444
symbol: Noca_1444
gene_biotype: protein_coding
description:
  PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: fra:Francci3_3829 twin-arginine translocation protein TatB.


ensembl_gene_id: Noca_1445
symbol: Noca_1445
gene_biotype: protein_coding
description:
  Protein of unknown function DUF59; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: Noca_1447
symbol: Noca_1447
gene_biotype: protein_coding
description:
  MgtE intracellular region; PFAM: CBS domain containing protein; MgtE intracellular region; KEGG: sma:SAV3110 magnesium (Mg2+) transporter.


ensembl_gene_id: Noca_1449
symbol: Noca_1449
gene_biotype: protein_coding
description:
  PFAM: Endonuclease/exonuclease/phosphatase; KEGG: hch:HCH_02985 beta-glucanase/beta-glucan synthetase.


ensembl_gene_id: Noca_1451
symbol: Noca_1451
gene_biotype: protein_coding
description:
  PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pat:Patl_3212 coagulation factor 5/8 type-like.


ensembl_gene_id: Noca_1456
symbol: Noca_1456
gene_biotype: protein_coding
description:
  PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: sma:SAV1915 putative acyl-CoA dehydrogenase.


ensembl_gene_id: Noca_1460
symbol: Noca_1460
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro06868 probable transporter, MFS superfamily.


ensembl_gene_id: Noca_1465
symbol: Noca_1465
gene_biotype: protein_coding
description:
  PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; KEGG: pac:PPA1328 predicted metal-dependent phosphoesterase.


ensembl_gene_id: Noca_1466
symbol: Noca_1466
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: sco:SCO4764 putative dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Noca_1467
symbol: Noca_1467
gene_biotype: protein_coding
description:
  PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: fal:FRAAL6061 putative partitioning or sporulation protein.


ensembl_gene_id: Noca_1469
symbol: Noca_1469
gene_biotype: protein_coding
description:
  PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: pac:PPA1325 putative ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.


ensembl_gene_id: Noca_1474
symbol: Noca_1474
gene_biotype: protein_coding
description:
  PFAM: UBA/THIF-type NAD/FAD binding protein; Rhodanese domain protein; MoeZ/MoeB domain protein; KEGG: sma:SAV3082 molybdopterin biosynthesis protein MoeB.


ensembl_gene_id: Noca_1478
symbol: Noca_1478
gene_biotype: protein_coding
description:
  PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: mmc:Mmcs_0154 ATPase associated with various cellular activities, AAA_3.


ensembl_gene_id: Noca_1481
symbol: Noca_1481
gene_biotype: protein_coding
description:
  O(6)-alkylguanine repair protein YbaZ; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; KEGG: tfu:Tfu_0522 hypothetical protein.


ensembl_gene_id: Noca_1482
symbol: Noca_1482
gene_biotype: protein_coding
description:
  KEGG: rha:RHA1_ro04496 ABC transporter, ATP-binding component; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.


ensembl_gene_id: Noca_1489
symbol: Noca_1489
gene_biotype: protein_coding
description:
  Carbon-monoxide dehydrogenase (acceptor); PFAM: molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: rha:RHA1_ro03491 dehydrogenase.


ensembl_gene_id: Noca_1490
symbol: Noca_1490
gene_biotype: protein_coding
description:
  PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rha:RHA1_ro03490 probable carbon monoxide dehydrogenase small subunit (ferredoxin).


ensembl_gene_id: Noca_1491
symbol: Noca_1491
gene_biotype: protein_coding
description:
  Xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: rha:RHA1_ro03489 probable carbon monoxide dehydrogenase large subunit.


ensembl_gene_id: Noca_1492
symbol: Noca_1492
gene_biotype: protein_coding
description:
  PFAM: carbon monoxide dehydrogenase subunit G; KEGG: rha:RHA1_ro03488 possible carbon monoxide dehydrogenase protein G.


ensembl_gene_id: Noca_1494
symbol: Noca_1494
gene_biotype: protein_coding
description:
  PFAM: phospholipid/glycerol acyltransferase; KEGG: lxx:Lxx12140 1-acylglycerol-3-phosphate O-acyltransferase.


ensembl_gene_id: Noca_1495
symbol: Noca_1495
gene_biotype: protein_coding
description:
  N-isopropylammelide isopropylaminohydrolase; PFAM: Amidohydrolase 3; KEGG: bja:bll7276 putative cytosine deaminase.


ensembl_gene_id: Noca_1496
symbol: Noca_1496
gene_biotype: protein_coding
description:
  5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: rha:RHA1_ro03487 probable hydantoin utilization protein A.


ensembl_gene_id: Noca_1502
symbol: Noca_1502
gene_biotype: protein_coding
description:
  PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: sco:SCO1335 putative oxidoreductase.


ensembl_gene_id: Noca_1504
symbol: Noca_1504
gene_biotype: protein_coding
description:
  Carbamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: mta:Moth_1948 carbamate kinase; Belongs to the carbamate kinase family.


ensembl_gene_id: Noca_1505
symbol: Noca_1505
gene_biotype: protein_coding
description:
  Barbiturase; Responsible for the hydrolysis of barbituric acid (2,4,6- trihydroxy-1,3-pyrimidine), an intermediate in the oxidative catabolism of pyrimidines. Catalyzes the hydrolytic opening of the pyrimidine ring of barbituric acid to yield ureidomalonic acid; Belongs to the cyclic amide hydrolase (CyAH) family.


ensembl_gene_id: Noca_1506
symbol: Noca_1506
gene_biotype: protein_coding
description:
  PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rha:RHA1_ro02936 probable formyl-CoA transferase; Belongs to the CoA-transferase III family.


ensembl_gene_id: Noca_1507
symbol: Noca_1507
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, AraC family; PFAM: ThiJ/PfpI domain protein; KEGG: bca:BCE_2883 hypothetical protein.


ensembl_gene_id: Noca_1508
symbol: Noca_1508
gene_biotype: protein_coding
description:
  PFAM: UvrD/REP helicase; KEGG: sco:SCO5183 ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily.


ensembl_gene_id: Noca_1509
symbol: Noca_1509
gene_biotype: protein_coding
description:
  PFAM: UvrD/REP helicase; KEGG: fra:Francci3_3799 UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily.


ensembl_gene_id: Noca_1512
symbol: Noca_1512
gene_biotype: protein_coding
description:
  PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sma:SAV1562 oxidoreductase.


ensembl_gene_id: Noca_1513
symbol: Noca_1513
gene_biotype: protein_coding
description:
  TIGRFAM: purine nucleoside phosphorylase; PFAM: purine and other phosphorylases, family 1; KEGG: oih:OB2345 purine nucleoside phosphorylase.


ensembl_gene_id: Noca_1515
symbol: Noca_1515
gene_biotype: protein_coding
description:
  TIGRFAM: Glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: sco:SCO5187 glutaredoxin-like protein.


ensembl_gene_id: Noca_1516
symbol: Noca_1516
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase, Rep family; PFAM: UvrD/REP helicase; HRDC domain protein; KEGG: sco:SCO5188 putative ATP-dependent DNA helicase.


ensembl_gene_id: Noca_1521
symbol: Noca_1521
gene_biotype: protein_coding
description:
  PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rme:Rmet_5150 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Noca_1522
symbol: Noca_1522
gene_biotype: protein_coding
description:
  PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; KEGG: nfa:nfa41810 hypothetical protein.


ensembl_gene_id: Noca_1526
symbol: Noca_1526
gene_biotype: protein_coding
description:
  PFAM: molybdopterin biosynthesis MoaE; KEGG: sma:SAV3059 putative molybdopterin biosynthesis protein E.


ensembl_gene_id: Noca_1531
symbol: Noca_1531
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: bpm:BURPS1710b_A1561 light regulation of gametogenesis6 protein.


ensembl_gene_id: Noca_1532
symbol: Noca_1532
gene_biotype: protein_coding
description:
  TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: rha:RHA1_ro03075 probable chromate transporter, chromate ion transporter family.


ensembl_gene_id: Noca_1536
symbol: Noca_1536
gene_biotype: protein_coding
description:
  TIGRFAM: DNA binding domain, excisionase family; KEGG: rxy:Rxyl_1923 phage transcriptional regulator, AlpA.


ensembl_gene_id: Noca_1549
symbol: Noca_1549
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: fra:Francci3_2321 major facilitator superfamily MFS_1.


ensembl_gene_id: Noca_1553
symbol: Noca_1553
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; PFAM: phosphoesterase, PA-phosphatase related; KEGG: sco:SCO4133 integral membrane protein.


ensembl_gene_id: Noca_1559
symbol: Noca_1559
gene_biotype: protein_coding
description:
  PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: fra:Francci3_2401 two component transcriptional regulator, winged helix family.


ensembl_gene_id: Noca_1560
symbol: Noca_1560
gene_biotype: protein_coding
description:
  PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: fal:FRAAL3820 putative transmembrane sensory transduction histidine kinase for metal resistance.


ensembl_gene_id: Noca_1562
symbol: Noca_1562
gene_biotype: protein_coding
description:
  PFAM: glycosyl transferase, family 2; KEGG: fra:Francci3_2271 dolichyl-phosphate beta-D-mannosyltransferase.


ensembl_gene_id: Noca_1563
symbol: Noca_1563
gene_biotype: protein_coding
description:
  PFAM: glycosyl transferase, group 1; KEGG: mac:MA0798 N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein.


ensembl_gene_id: Noca_1576
symbol: Noca_1576
gene_biotype: protein_coding
description:
  Type IV secretory pathway VirD4 components-like protein; KEGG: sma:SAV4509 conjugative transfer gene complex protein.


ensembl_gene_id: Noca_1580
symbol: Noca_1580
gene_biotype: protein_coding
description:
  PFAM: TOPRIM domain protein; DNA primase catalytic core, N-terminal domain; SMART: Toprim sub domain protein; KEGG: mmc:Mmcs_1430 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member-like protein.


ensembl_gene_id: Noca_1582
symbol: Noca_1582
gene_biotype: protein_coding
description:
  PFAM: ParB domain protein nuclease; KEGG: rha:RHA1_ro03182 possible chromosome partitioning protein-like protein.


ensembl_gene_id: Noca_1588
symbol: Noca_1588
gene_biotype: protein_coding
description:
  PFAM: type III restriction enzyme, res subunit; SMART: DEAD-like helicases-like; KEGG: spd:SPD_1079 type II restriction endonuclease, putative.


ensembl_gene_id: Noca_1589
symbol: Noca_1589
gene_biotype: protein_coding
description:
  PFAM: Eco57I restriction endonuclease; KEGG: stc:str1375 type II restriction-modification system restriction subunit.


ensembl_gene_id: Noca_1595
symbol: Noca_1595
gene_biotype: protein_coding
description:
  PFAM: phosphoesterase, PA-phosphatase related; KEGG: fal:FRAAL0031 conserved hypothetical protein; putative integral membrane protein.


ensembl_gene_id: Noca_1596
symbol: Noca_1596
gene_biotype: protein_coding
description:
  PFAM: mannose-6-phosphate isomerase, type II; Cupin 2, conserved barrel domain protein; KEGG: syn:slr0493 putative mannose-1-phosphate guanylyltransferase.


ensembl_gene_id: Noca_1598
symbol: Noca_1598
gene_biotype: protein_coding
description:
  PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rha:RHA1_ro08012 response regulator, two-component system.


ensembl_gene_id: Noca_1599
symbol: Noca_1599
gene_biotype: protein_coding
description:
  PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rha:RHA1_ro08011 sensory histidine kinase.


ensembl_gene_id: Noca_1601
symbol: Noca_1601
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF347; KEGG: fal:FRAAL6358 putative integral membrane protein (partial match).


ensembl_gene_id: Noca_1604
symbol: Noca_1604
gene_biotype: protein_coding
description:
  PFAM: glycosyl transferase, family 2; KEGG: ade:Adeh_2624 dolichyl-phosphate beta-D-mannosyltransferase.


ensembl_gene_id: Noca_1606
symbol: Noca_1606
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rha:RHA1_ro03122 ABC lipoprotein transporter, ATP-binding component.


ensembl_gene_id: Noca_1607
symbol: Noca_1607
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO6367 ABC transporter ATP-binding protein.


ensembl_gene_id: Noca_1610
symbol: Noca_1610
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rha:RHA1_ro08012 response regulator, two-component system.


ensembl_gene_id: Noca_1613
symbol: Noca_1613
gene_biotype: protein_coding
description:
  PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rha:RHA1_ro08549 response regulator, two-component system.


ensembl_gene_id: Noca_1614
symbol: Noca_1614
gene_biotype: protein_coding
description:
  PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rha:RHA1_ro00073 sensor kinase, two-component system.


ensembl_gene_id: Noca_1615
symbol: Noca_1615
gene_biotype: protein_coding
description:
  PFAM: phage integrase family protein; KEGG: fal:FRAAL6356 putative tyrosine recombinase XerD; Belongs to the 'phage' integrase family.


ensembl_gene_id: Noca_1617
symbol: Noca_1617
gene_biotype: protein_coding
description:
  TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: afu:AF2137 hypothetical protein.


ensembl_gene_id: Noca_1619
symbol: Noca_1619
gene_biotype: protein_coding
description:
  PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: lsl:LSL_1782 transcriptional regulator, crp family.


ensembl_gene_id: Noca_1622
symbol: Noca_1622
gene_biotype: protein_coding
description:
  PFAM: cytochrome c oxidase, subunit II; KEGG: tdn:Tmden_0103 putative cytochrome c oxidase subunit II.


ensembl_gene_id: Noca_1624
symbol: Noca_1624
gene_biotype: protein_coding
description:
  Tryptophanase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sru:SRU_1708 beta-eliminating lyase.


ensembl_gene_id: Noca_1625
symbol: Noca_1625
gene_biotype: protein_coding
description:
  PFAM: regulatory protein, AsnC/Lrp family; helix-turn-helix, HxlR type; KEGG: tfu:Tfu_0920 regulatory proteins, AsnC/Lrp.


ensembl_gene_id: Noca_1627
symbol: Noca_1627
gene_biotype: protein_coding
description:
  PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: mta:Moth_2000 pyridoxal-5'-phosphate-dependent enzyme, beta subunit.


ensembl_gene_id: Noca_1630
symbol: Noca_1630
gene_biotype: protein_coding
description:
  Methylenetetrahydromethanopterin reductase; PFAM: luciferase family protein; KEGG: hma:pNG7255 F420-dependent N5,N10-methylene-tetrahydromethanopterin reductase.


ensembl_gene_id: Noca_1631
symbol: Noca_1631
gene_biotype: protein_coding
description:
  KEGG: pho:PH0720 aspartate carbamoyltransferase catalytic chain; TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.


ensembl_gene_id: Noca_1632
symbol: Noca_1632
gene_biotype: protein_coding
description:
  PFAM: aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; KEGG: mta:Moth_1996 ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.


ensembl_gene_id: Noca_1633
symbol: Noca_1633
gene_biotype: protein_coding
description:
  Selenate reductase, FAD-binding subunit; PFAM: molybdopterin dehydrogenase, FAD-binding; KEGG: ecc:c3458 hypothetical protein YgfM.


ensembl_gene_id: Noca_1634
symbol: Noca_1634
gene_biotype: protein_coding
description:
  PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: hma:pNG7246 possible hypoxanthine oxidase XdhD.


ensembl_gene_id: Noca_1635
symbol: Noca_1635
gene_biotype: protein_coding
description:
  Dihydropyrimidinase; KEGG: sus:Acid_7659 dihydropyrimidinase; TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase; Amidohydrolase 3.


ensembl_gene_id: Noca_1636
symbol: Noca_1636
gene_biotype: protein_coding
description:
  PFAM: ferredoxin; molybdopterin dehydrogenase, FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; KEGG: sco:SCO4971 putative dehydrogenase.


ensembl_gene_id: Noca_1637
symbol: Noca_1637
gene_biotype: protein_coding
description:
  Xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: dge:Dgeo_2604 xanthine dehydrogenase.


ensembl_gene_id: Noca_1638
symbol: Noca_1638
gene_biotype: protein_coding
description:
  Molybdenum cofactor sulfurylase; PFAM: protein of unknown function DUF182; KEGG: sco:SCO4973 xanthine dehydrogenase accessory factor.


ensembl_gene_id: Noca_1639
symbol: egtD
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Catalyzes the SAM-dependent triple methylation of the alpha- amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine; Belongs to the methyltransferase superfamily. EgtD family.


ensembl_gene_id: Noca_1641
symbol: Noca_1641
gene_biotype: protein_coding
description:
  PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: rxy:Rxyl_1332 transcriptional regulator, Crp/Fnr family.


ensembl_gene_id: Noca_1645
symbol: Noca_1645
gene_biotype: protein_coding
description:
  TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sco:SCO3446 putative dehalogenase.


ensembl_gene_id: Noca_1646
symbol: Noca_1646
gene_biotype: protein_coding
description:
  PFAM: regulatory protein, MerR; KEGG: mbo:Mb3367 probable transcriptional regulatory protein (probably MerR-family).


ensembl_gene_id: Noca_1648
symbol: Noca_1648
gene_biotype: protein_coding
description:
  Pyridine nucleotide-disulfide oxidoreductase dimerization region; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: sep:SE0080 regulatory protein.


ensembl_gene_id: Noca_1649
symbol: Noca_1649
gene_biotype: protein_coding
description:
  Pyruvate carboxyltransferase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family.


ensembl_gene_id: Noca_1650
symbol: Noca_1650
gene_biotype: protein_coding
description:
  Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.


ensembl_gene_id: Noca_1656
symbol: Noca_1656
gene_biotype: protein_coding
description:
  Aminotransferase; PFAM: class II aldolase/adducin family protein; aminotransferase class-III; KEGG: psp:PSPPH_2738 glutamate-1-semialdehyde aminotransferase.


ensembl_gene_id: Noca_1658
symbol: Noca_1658
gene_biotype: protein_coding
description:
  Glutamate dehydrogenase (NADP); PFAM: Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase, dimerisation region; KEGG: nfa:nfa45920 putative glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: Noca_1660
symbol: Noca_1660
gene_biotype: protein_coding
description:
  Transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: rxy:Rxyl_1803 transcriptional regulator, Crp/Fnr family.


ensembl_gene_id: Noca_1662
symbol: Noca_1662
gene_biotype: protein_coding
description:
  Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: cgb:cg3295 cation transport ATPase.


ensembl_gene_id: Noca_1665
symbol: Noca_1665
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rha:RHA1_ro06063 probable ABC transporter, ATP-binding component.


ensembl_gene_id: Noca_1667
symbol: Noca_1667
gene_biotype: protein_coding
description:
  Male sterility C-terminal domain; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; KEGG: sru:SRU_2653 3-beta hydroxysteroid dehydrogenase/isomerase family.


ensembl_gene_id: Noca_1669
symbol: Noca_1669
gene_biotype: protein_coding
description:
  Diacylglycerol O-acyltransferase; PFAM: condensation domain protein; protein of unknown function UPF0089; KEGG: sru:SRU_2506 uncharacterized protein family (UPF0089).


ensembl_gene_id: Noca_1670
symbol: Noca_1670
gene_biotype: protein_coding
description:
  PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; KEGG: mag:amb3735 signal transduction histidine kinase.


ensembl_gene_id: Noca_1673
symbol: Noca_1673
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: mes:Meso_2289 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.


ensembl_gene_id: Noca_1675
symbol: Noca_1675
gene_biotype: protein_coding
description:
  PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases-like; KEGG: lxx:Lxx07490 ATP-dependent RNA helicase.


ensembl_gene_id: Noca_1676
symbol: Noca_1676
gene_biotype: protein_coding
description:
  PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: rha:RHA1_ro01261 sigma factor, sigma 70 type, group 4; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: Noca_1683
symbol: Noca_1683
gene_biotype: protein_coding
description:
  PFAM: bifunctional deaminase-reductase domain protein; KEGG: nfa:nfa33100 putative riboflavin-specific deaminase.


ensembl_gene_id: Noca_1685
symbol: Noca_1685
gene_biotype: protein_coding
description:
  TIGRFAM: peptidase S26B, signal peptidase; PFAM: cellulose-binding, family II; peptidase S24, S26A and S26B; KEGG: rpd:RPD_3003 outer membrane autotransporter barrel.


ensembl_gene_id: Noca_1688
symbol: Noca_1688
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: ade:Adeh_2233 transcriptional regulator, GntR family.


ensembl_gene_id: Noca_1689
symbol: Noca_1689
gene_biotype: protein_coding
description:
  Amino acid exporter, AAE family; PFAM: amino acid permease-associated region; KEGG: bte:BTH_II1129 amino acid permease; TC 2.A.3.13.


ensembl_gene_id: Noca_1691
symbol: Noca_1691
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate cytidylyltransferase; TIGRFAM: cytidyltransferase-related domain; PFAM: Riboflavin kinase / FAD synthetase; cytidylyltransferase; KEGG: ppr:PBPRA2703 putative glycerol-3-phosphate cytidyltransferase.


ensembl_gene_id: Noca_1692
symbol: Noca_1692
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF445; KEGG: fra:Francci3_2863 protein of unknown function DUF445.


ensembl_gene_id: Noca_1694
symbol: Noca_1694
gene_biotype: protein_coding
description:
  PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: sma:SAV6687 putative FK-506 binding protein, peptidyl-prolyl cis-trans isomerase.


ensembl_gene_id: Noca_1695
symbol: Noca_1695
gene_biotype: protein_coding
description:
  PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: fal:FRAAL0362 putative integral membrane protein.


ensembl_gene_id: Noca_1697
symbol: Noca_1697
gene_biotype: protein_coding
description:
  TIGRFAM: histidinol-phosphate phosphatase, putative; PFAM: inositol monophosphatase; KEGG: pac:PPA1271 putative inositol monophosphatase.


ensembl_gene_id: Noca_1699
symbol: rsgA
gene_biotype: protein_coding
description:
  GTPase EngC; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: Noca_1700
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: Noca_1702
symbol: Noca_1702
gene_biotype: protein_coding
description:
  PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; KEGG: sco:SCO4117 hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: Noca_1704
symbol: Noca_1704
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF159; KEGG: rha:RHA1_ro08499 hypothetical protein; Belongs to the SOS response-associated peptidase family.


ensembl_gene_id: Noca_1706
symbol: Noca_1706
gene_biotype: protein_coding
description:
  RNA polymerase, sigma subunit, ECF family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: sma:SAV3038 putative RNA polymerase ECF-subfamily sigma factor.


ensembl_gene_id: Noca_1710
symbol: Noca_1710
gene_biotype: protein_coding
description:
  PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: tfu:Tfu_0553 acetolactate synthase large subunit.


ensembl_gene_id: Noca_1712
symbol: Noca_1712
gene_biotype: protein_coding
description:
  PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation/phosphoacceptor; PAS fold-4 domain protein; KEGG: sma:SAV3017 two-component system sensor kinase.


ensembl_gene_id: Noca_1715
symbol: Noca_1715
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: fal:FRAAL5992 SigH putative RNA polymerase sigma factor.


ensembl_gene_id: Noca_1717
symbol: Noca_1717
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: afu:AF1018 ABC transporter, ATP-binding protein.


ensembl_gene_id: Noca_1718
symbol: Noca_1718
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF214; KEGG: tte:TTE2713 ABC-type transport systems, involved in lipoprotein release, permease components.


ensembl_gene_id: Noca_1719
symbol: Noca_1719
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dra:DR2404 ABC transporter, ATP-binding protein, MsbA family.


ensembl_gene_id: Noca_1724
symbol: Noca_1724
gene_biotype: protein_coding
description:
  PFAM: phage integrase family protein; KEGG: nfa:nfa7110 putative phage integrase; Belongs to the 'phage' integrase family.


ensembl_gene_id: Noca_1727
symbol: Noca_1727
gene_biotype: protein_coding
description:
  Malate dehydrogenase (oxaloacetate-decarboxylating); PFAM: malic enzyme domain protein; malic enzyme, NAD-binding; KEGG: sma:SAV2981 putative malate dehydrogenase.


ensembl_gene_id: Noca_1728
symbol: Noca_1728
gene_biotype: protein_coding
description:
  PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: tfu:Tfu_1276 alcohol dehydrogenase.


ensembl_gene_id: Noca_1729
symbol: Noca_1729
gene_biotype: protein_coding
description:
  PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: sma:SAV2750 short chain dehydrogenase.


ensembl_gene_id: Noca_1737
symbol: Noca_1737
gene_biotype: protein_coding
description:
  TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: dehydrogenase, E1 component; catalytic domain of components of various dehydrogenase complexes; Transketolase, central region; KEGG: sco:SCO5281 putative 2-oxoglutarate dehydrogenase.


ensembl_gene_id: Noca_1739
symbol: Noca_1739
gene_biotype: protein_coding
description:
  TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: mta:Moth_2366 cell envelope-related transcriptional attenuator.


ensembl_gene_id: Noca_1742
symbol: argS
gene_biotype: protein_coding
description:
  KEGG: fal:FRAAL5953 arginyl-tRNA synthetase (arginine--tRNA ligase); TIGRFAM: arginyl-tRNA synthetase.


ensembl_gene_id: Noca_1743
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: Noca_1744
symbol: Noca_1744
gene_biotype: protein_coding
description:
  PFAM: homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase, NAD-binding; KEGG: tfu:Tfu_2424 homoserine dehydrogenase.


ensembl_gene_id: Noca_1745
symbol: Noca_1745
gene_biotype: protein_coding
description:
  L-threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.


ensembl_gene_id: Noca_1746
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: Noca_1747
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: Noca_1751
symbol: prfA
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 1 (bRF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: Noca_1752
symbol: prmC
gene_biotype: protein_coding
description:
  Modification methylase, HemK family; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: Noca_1753
symbol: Noca_1753
gene_biotype: protein_coding
description:
  Translation factor SUA5; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC, N-terminal domain; KEGG: sma:SAV2910 hypothetical protein; Belongs to the SUA5 family.


ensembl_gene_id: Noca_1754
symbol: Noca_1754
gene_biotype: protein_coding
description:
  PFAM: glycosyl transferase, family 4; KEGG: pac:PPA1248 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase.


ensembl_gene_id: Noca_1757
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.


ensembl_gene_id: Noca_1758
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: Noca_1759
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex B subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: Noca_1760
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family.


ensembl_gene_id: Noca_1761
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: Noca_1762
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: Noca_1763
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: Noca_1764
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: Noca_1769
symbol: Noca_1769
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro04560 probable transporter, MFS superfamily.


ensembl_gene_id: Noca_1770
symbol: Noca_1770
gene_biotype: protein_coding
description:
  TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: sco:SCO5381 hypothetical protein; Belongs to the Cob(I)alamin adenosyltransferase family.


ensembl_gene_id: Noca_1771
symbol: Noca_1771
gene_biotype: protein_coding
description:
  PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: sco:SCO5386 anti-sigma factor antagonist.


ensembl_gene_id: Noca_1772
symbol: Noca_1772
gene_biotype: protein_coding
description:
  KEGG: sma:SAV1912 putative methylmalonyl-CoA mutase, coenzyme B12-dependent alpha subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein.


ensembl_gene_id: Noca_1780
symbol: Noca_1780
gene_biotype: protein_coding
description:
  D-amino-acid:oxygen oxidoreductase (deaminating); PFAM: FAD dependent oxidoreductase; KEGG: rxy:Rxyl_0526 D-amino acid oxidase.


ensembl_gene_id: Noca_1782
symbol: nucS
gene_biotype: protein_coding
description:
  Protein of unknown function DUF91; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family.


ensembl_gene_id: Noca_1783
symbol: Noca_1783
gene_biotype: protein_coding
description:
  PFAM: chemotaxis sensory transducer; KEGG: ter:Tery_4229 methyl-accepting chemotaxis sensory transducer.


ensembl_gene_id: Noca_1784
symbol: Noca_1784
gene_biotype: protein_coding
description:
  PFAM: UDP-glucose/GDP-mannose dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: sco:SCO6475 oxidoreductase.


ensembl_gene_id: Noca_1785
symbol: Noca_1785
gene_biotype: protein_coding
description:
  PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: sma:SAV5186 sugar transport protein.


ensembl_gene_id: Noca_1788
symbol: Noca_1788
gene_biotype: protein_coding
description:
  PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: rxy:Rxyl_2930 peptidase S8 and S53, subtilisin, kexin, sedolisin; Belongs to the peptidase S8 family.


ensembl_gene_id: Noca_1792
symbol: Noca_1792
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF6, transmembrane; KEGG: mmc:Mmcs_1118 protein of unknown function DUF6, transmembrane.


ensembl_gene_id: Noca_1795
symbol: Noca_1795
gene_biotype: protein_coding
description:
  TIGRFAM: crotonyl-CoA reductase; PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sma:SAV1911 crotonyl-CoA reductase.


ensembl_gene_id: Noca_1796
symbol: Noca_1796
gene_biotype: protein_coding
description:
  methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rha:RHA1_ro01456 possible methylmalonyl-CoA epimerase.


ensembl_gene_id: Noca_1797
symbol: Noca_1797
gene_biotype: protein_coding
description:
  acetyl-CoA acetyltransferase; KEGG: nfa:nfa10750 putative acyl-CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Noca_1802
symbol: Noca_1802
gene_biotype: protein_coding
description:
  KEGG: sma:SAV2832 putative isobutyryl-CoA mutase, chain A; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase.


ensembl_gene_id: Noca_1803
symbol: Noca_1803
gene_biotype: protein_coding
description:
  PFAM: acetyl-CoA hydrolase/transferase; KEGG: fra:Francci3_1561 4-hydroxybutyrate coenzyme A transferase.


ensembl_gene_id: Noca_1805
symbol: Noca_1805
gene_biotype: protein_coding
description:
  PFAM: NUDIX hydrolase; KEGG: pac:PPA1110 putative pyrophosphohydrolase; Belongs to the Nudix hydrolase family.


ensembl_gene_id: Noca_1806
symbol: glgB
gene_biotype: protein_coding
description:
  1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: Noca_1808
symbol: Noca_1808
gene_biotype: protein_coding
description:
  KEGG: sma:SAV2803 trehalose synthase; TIGRFAM: trehalose synthase; PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain.


ensembl_gene_id: Noca_1809
symbol: glgE
gene_biotype: protein_coding
description:
  Alpha amylase, catalytic region; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.


ensembl_gene_id: Noca_1811
symbol: Noca_1811
gene_biotype: protein_coding
description:
  KEGG: sma:SAV2800 putative glycogen phosphorylase; TIGRFAM: alpha-glucan phosphorylases; PFAM: glycosyl transferase, family 35.


ensembl_gene_id: Noca_1812
symbol: Noca_1812
gene_biotype: protein_coding
description:
  Glycogen debranching enzyme GlgX; KEGG: sma:SAV2789 putative glycosyl hydrolase; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: Noca_1813
symbol: Noca_1813
gene_biotype: protein_coding
description:
  PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sma:SAV2786 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Noca_1818
symbol: proA
gene_biotype: protein_coding
description:
  Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: Noca_1820
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: Noca_1821
symbol: rsfS
gene_biotype: protein_coding
description:
  Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: Noca_1822
symbol: Noca_1822
gene_biotype: protein_coding
description:
  PFAM: Phosphoglycerate mutase; KEGG: tfu:Tfu_2169 putative phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family.


ensembl_gene_id: Noca_1825
symbol: Noca_1825
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: mmc:Mmcs_1694 transcriptional regulator, AraC family.


ensembl_gene_id: Noca_1828
symbol: Noca_1828
gene_biotype: protein_coding
description:
  acetyl-CoA acetyltransferase; KEGG: nfa:nfa34130 putative acyl-CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Noca_1832
symbol: Noca_1832
gene_biotype: protein_coding
description:
  PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: nfa:nfa34080 putative acyl-CoA dehydrogenase.


ensembl_gene_id: Noca_1834
symbol: Noca_1834
gene_biotype: protein_coding
description:
  PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: rha:RHA1_ro01497 3-oxoacyl-[acyl-carrier-protein] reductase.


ensembl_gene_id: Noca_1835
symbol: Noca_1835
gene_biotype: protein_coding
description:
  PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: rha:RHA1_ro00724 indolepyruvate ferredoxin oxidoreductase alpha and beta subunit.


ensembl_gene_id: Noca_1838
symbol: Noca_1838
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; KEGG: dar:Daro_0271 inner-membrane translocator; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Noca_1839
symbol: Noca_1839
gene_biotype: protein_coding
description:
  PFAM: inner-membrane translocator; KEGG: dvu:DVU0549 high-affinity branched-chain amino acid ABC transporter, permease protein; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Noca_1840
symbol: Noca_1840
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: wsu:WS1467 ABC transport system ATP-binding protein; TC 3.A.1.4.-.


ensembl_gene_id: Noca_1841
symbol: Noca_1841
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO2012 putative branched chain amino acid transport ATP-binding protein; TC 3.A.1.4.-.


ensembl_gene_id: Noca_1842
symbol: Noca_1842
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: gsu:GSU3401 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative; TC 3.A.1.4.-.


ensembl_gene_id: Noca_1844
symbol: Noca_1844
gene_biotype: protein_coding
description:
  PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rha:RHA1_ro06076 2,4-dienoyl-CoA reductase.


ensembl_gene_id: Noca_1849
symbol: Noca_1849
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: bam:Bamb_4144 short-chain dehydrogenase/reductase SDR.


ensembl_gene_id: Noca_1850
symbol: Noca_1850
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF861, cupin_3; KEGG: fnu:FN0090 ethanolamine utilization protein EutQ.


ensembl_gene_id: Noca_1851
symbol: Noca_1851
gene_biotype: protein_coding
description:
  PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_C0508 putative dehydrogenase flavoprotein.


ensembl_gene_id: Noca_1853
symbol: Noca_1853
gene_biotype: protein_coding
description:
  PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rfr:Rfer_2384 acyl-CoA dehydrogenase-like.


ensembl_gene_id: Noca_1857
symbol: Noca_1857
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rha:RHA1_ro02735 probable 3-oxoacyl-[acyl-carrier-protein] reductase.


ensembl_gene_id: Noca_1858
symbol: Noca_1858
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF6, transmembrane; KEGG: bcn:Bcen_4953 protein of unknown function DUF6, transmembrane.


ensembl_gene_id: Noca_1860
symbol: Noca_1860
gene_biotype: protein_coding
description:
  PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: fal:FRAAL4180 hypothetical protein.


ensembl_gene_id: Noca_1864
symbol: Noca_1864
gene_biotype: protein_coding
description:
  PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: fal:FRAAL5304 sensory histidine kinase in two-component regulatory system wtih KdpE, regulation of potassium translocation.


ensembl_gene_id: Noca_1865
symbol: Noca_1865
gene_biotype: protein_coding
description:
  PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sco:SCO5872 putative turgor pressure regulator.


ensembl_gene_id: Noca_1867
symbol: nhaA2
gene_biotype: protein_coding
description:
  Sodium/proton antiporter, NhaA family; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; In the N-terminal section; belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.


ensembl_gene_id: Noca_1880
symbol: Noca_1880
gene_biotype: protein_coding
description:
  TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: fal:FRAAL1709 putative phosphoglycolate phosphatase.


ensembl_gene_id: Noca_1884
symbol: leuS
gene_biotype: protein_coding
description:
  TIGRFAM: leucyl-tRNA synthetase; KEGG: pac:PPA0893 leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: Noca_1886
symbol: Noca_1886
gene_biotype: protein_coding
description:
  TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; SMART: Helix-hairpin-helix DNA-binding, class 1; KEGG: nfa:nfa13820 putative DNA-binding protein.


ensembl_gene_id: Noca_1887
symbol: Noca_1887
gene_biotype: protein_coding
description:
  TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: sco:SCO2567 integral membrane protein.


ensembl_gene_id: Noca_1888
symbol: Noca_1888
gene_biotype: protein_coding
description:
  TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta; KEGG: sco:SCO2564 putative DNA polymerase III, delta subunit.


ensembl_gene_id: Noca_1891
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: Noca_1892
symbol: Noca_1892
gene_biotype: protein_coding
description:
  PFAM: aminoglycoside/hydroxyurea antibiotic resistance kinase; KEGG: sma:SAV3961 hydroxyurea phosphotransferase.


ensembl_gene_id: Noca_1897
symbol: dnaE2
gene_biotype: protein_coding
description:
  Error-prone DNA polymerase, DnaE-like protein; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.


ensembl_gene_id: Noca_1898
symbol: Noca_1898
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase, anaerobic; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: Noca_1903
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: Noca_1904
symbol: dnaJ
gene_biotype: protein_coding
description:
  Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]


ensembl_gene_id: Noca_1905
symbol: Noca_1905
gene_biotype: protein_coding
description:
  Protein of unknown function DUF558; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: Noca_1908
symbol: Noca_1908
gene_biotype: protein_coding
description:
  Sigma-70, region 4 type 2; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: tfu:Tfu_0842 putative RNA polymerase ECF-subfamily sigma factor.


ensembl_gene_id: Noca_1912
symbol: Noca_1912
gene_biotype: protein_coding
description:
  PFAM: PhoH family protein; KEGG: tfu:Tfu_0844 phosphate starvation-inducible protein PhoH predicted ATPase.


ensembl_gene_id: Noca_1913
symbol: ybeY
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: Noca_1914
symbol: Noca_1914
gene_biotype: protein_coding
description:
  PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: pac:PPA0938 conserved protein, putative hemolysin.


ensembl_gene_id: Noca_1917
symbol: Noca_1917
gene_biotype: protein_coding
description:
  PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rha:RHA1_ro04207 cyclopropane-fatty-acyl-phospholipid synthase.


ensembl_gene_id: Noca_1918
symbol: Noca_1918
gene_biotype: protein_coding
description:
  PFAM: Siderophore-interacting protein; FAD-binding 9, siderophore-interacting domain protein; KEGG: rha:RHA1_ro06437 hypothetical protein.


ensembl_gene_id: Noca_1919
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: Noca_1923
symbol: Noca_1923
gene_biotype: protein_coding
description:
  PFAM: ATP-binding region, ATPase domain protein domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: mtc:MT1410 sensory box protein/anti-anti-sigma factor.


ensembl_gene_id: Noca_1925
symbol: Noca_1925
gene_biotype: protein_coding
description:
  PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: fra:Francci3_3755 sigma 28 subunit; Belongs to the sigma-70 factor family.


ensembl_gene_id: Noca_1926
symbol: Noca_1926
gene_biotype: protein_coding
description:
  PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sco:SCO6706 glutathione-dependent aldehyde dehydrogenase.


ensembl_gene_id: Noca_1927
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.


ensembl_gene_id: Noca_1928
symbol: Noca_1928
gene_biotype: protein_coding
description:
  PAS/PAC sensor signal transduction histidine kinase; KEGG: psb:Psyr_2940 PAS; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; MASE1 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.


ensembl_gene_id: Noca_1934
symbol: Noca_1934
gene_biotype: protein_coding
description:
  Zinc uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: sma:SAV5631 putative metal uptake regulation protein; Belongs to the Fur family.


ensembl_gene_id: Noca_1936
symbol: Noca_1936
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV5633 putative manganese transport system ABC transporter ATP-binding protein.


ensembl_gene_id: Noca_1937
symbol: Noca_1937
gene_biotype: protein_coding
description:
  PFAM: periplasmic solute binding protein; KEGG: sco:SCO2505 putative ABC-transporter metal-binding lipoprotein.


ensembl_gene_id: Noca_1938
symbol: Noca_1938
gene_biotype: protein_coding
description:
  Periplasmic component of the Tol biopolymer transport system-like protein; KEGG: sma:SAV2712 hypothetical protein.


ensembl_gene_id: Noca_1940
symbol: glyQS
gene_biotype: protein_coding
description:
  glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: Noca_1942
symbol: Noca_1942
gene_biotype: protein_coding
description:
  Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: Noca_1945
symbol: Noca_1945
gene_biotype: protein_coding
description:
  KEGG: fra:Francci3_1281 deoxyguanosinetriphosphate triphosphohydrolase; TIGRFAM: putative deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; Belongs to the dGTPase family. Type 2 subfamily.


ensembl_gene_id: Noca_1947
symbol: Noca_1947
gene_biotype: protein_coding
description:
  KEGG: pac:PPA0957 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger, CHC2-family protein; TOPRIM domain protein; DNA primase catalytic core, N-terminal domain; SMART: Hedgehog/intein hint domain protein; Toprim sub domain protein; DNA primase DnaG, DnaB-binding.


ensembl_gene_id: Noca_1951
symbol: Noca_1951
gene_biotype: protein_coding
description:
  PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: ade:Adeh_2146 cytochrome c biogenesis protein.


ensembl_gene_id: Noca_1952
symbol: Noca_1952
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mbu:Mbur_0983 ABC heme exporter, ATPase subunit.


ensembl_gene_id: Noca_1953
symbol: Noca_1953
gene_biotype: protein_coding
description:
  PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: dra:DR0407 cytochrome c-type biogenesis protein, heme exporter protein B.


ensembl_gene_id: Noca_1955
symbol: Noca_1955
gene_biotype: protein_coding
description:
  PFAM: cytochrome c assembly protein; KEGG: dra:DR0348 cytochrome c-type biogenesis protein, heme exporter protein C.


ensembl_gene_id: Noca_1957
symbol: Noca_1957
gene_biotype: protein_coding
description:
  CcmE/CycJ protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.


ensembl_gene_id: Noca_1959
symbol: Noca_1959
gene_biotype: protein_coding
description:
  Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: mxa:MXAN_3252 thiol:disulfide interchange protein DsbE.


ensembl_gene_id: Noca_1966
symbol: Noca_1966
gene_biotype: protein_coding
description:
  PFAM: phage integrase family protein; KEGG: mmc:Mmcs_1422 phage integrase; Belongs to the 'phage' integrase family.


ensembl_gene_id: Noca_1974
symbol: Noca_1974
gene_biotype: protein_coding
description:
  Chemotaxis sensory transducer; PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: aba:Acid345_1526 methyl-accepting chemotaxis sensory transducer.


ensembl_gene_id: Noca_1977
symbol: Noca_1977
gene_biotype: protein_coding
description:
  KEGG: mca:MCA1204 sensory box histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.


ensembl_gene_id: Noca_1978
symbol: Noca_1978
gene_biotype: protein_coding
description:
  PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: nfa:nfa31920 putative serine/threonine protein kinase.


ensembl_gene_id: Noca_1979
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: Noca_1980
symbol: Noca_1980
gene_biotype: protein_coding
description:
  PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; ferredoxin-dependent glutamate synthase; KEGG: dra:DR1031 (S)-2-hydroxy-acid oxidase.


ensembl_gene_id: Noca_1986
symbol: Noca_1986
gene_biotype: protein_coding
description:
  Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: mmc:Mmcs_3368 propionyl-CoA carboxylase.


ensembl_gene_id: Noca_1987
symbol: Noca_1987
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: Noca_1988
symbol: acpP
gene_biotype: protein_coding
description:
  Phosphopantetheine-binding protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.


ensembl_gene_id: Noca_1989
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: Noca_1993
symbol: Noca_1993
gene_biotype: protein_coding
description:
  2-oxo-acid dehydrogenase E1 subunit, homodimeric type; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: Noca_1996
symbol: Noca_1996
gene_biotype: protein_coding
description:
  Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sco:SCO2369 thiol-specific antioxidant protein.


ensembl_gene_id: Noca_1998
symbol: Noca_1998
gene_biotype: protein_coding
description:
  TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; PFAM: NAD-dependent epimerase/dehydratase; Male sterility C-terminal domain; KEGG: fal:FRAAL3759 putative fatty acyl coA reductase.


ensembl_gene_id: Noca_1999
symbol: Noca_1999
gene_biotype: protein_coding
description:
  PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rxy:Rxyl_2111 alcohol dehydrogenase, zinc-binding protein.


ensembl_gene_id: Noca_2001
symbol: Noca_2001
gene_biotype: protein_coding
description:
  PFAM: phospholipid/glycerol acyltransferase; KEGG: fra:Francci3_2279 phospholipid/glycerol acyltransferase.


ensembl_gene_id: Noca_2002
symbol: Noca_2002
gene_biotype: protein_coding
description:
  TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: lxx:Lxx21010 iron-dependent peroxidase.


ensembl_gene_id: Noca_2005
symbol: Noca_2005
gene_biotype: protein_coding
description:
  PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mmc:Mmcs_0015 serine/threonine protein kinase.


ensembl_gene_id: Noca_2006
symbol: Noca_2006
gene_biotype: protein_coding
description:
  PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sco:SCO2143 two component system response regulator.


ensembl_gene_id: Noca_2007
symbol: Noca_2007
gene_biotype: protein_coding
description:
  PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: tfu:Tfu_1329 ATP-binding region, ATPase-like:histidine kinase, HAMP region:histidine kinase A, N-terminal.


ensembl_gene_id: Noca_2009
symbol: Noca_2009
gene_biotype: protein_coding
description:
  PFAM: AMP-dependent synthetase and ligase; KEGG: fra:Francci3_2165 AMP-dependent synthetase and ligase.


ensembl_gene_id: Noca_2011
symbol: Noca_2011
gene_biotype: protein_coding
description:
  PFAM: GTP-binding protein, HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: pac:PPA1677 ferrous iron transport protein B.


ensembl_gene_id: Noca_2013
symbol: Noca_2013
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF34; KEGG: rha:RHA1_ro01183 hypothetical protein; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.


ensembl_gene_id: Noca_2014
symbol: Noca_2014
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF164; KEGG: fal:FRAAL2220 conserved hypothetical protein; putative coiled-coil domain.


ensembl_gene_id: Noca_2016
symbol: Noca_2016
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF328; KEGG: sco:SCO2297 hypothetical protein; Belongs to the UPF0246 family.


ensembl_gene_id: Noca_2020
symbol: Noca_2020
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: fra:Francci3_1590 ABC transporter related; Belongs to the ABC transporter superfamily.


ensembl_gene_id: Noca_2021
symbol: Noca_2021
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fra:Francci3_1591 binding-protein-dependent transport systems inner membrane component.


ensembl_gene_id: Noca_2022
symbol: Noca_2022
gene_biotype: protein_coding
description:
  PFAM: extracellular solute-binding protein, family 1; KEGG: fra:Francci3_1592 extracellular solute-binding protein, family 1.


ensembl_gene_id: Noca_2034
symbol: Noca_2034
gene_biotype: protein_coding
description:
  Malate dehydrogenase (oxaloacetate-decarboxylating); PFAM: amino acid-binding ACT domain protein; malic enzyme domain protein; malic enzyme, NAD-binding; KEGG: rha:RHA1_ro00492 malate dehydrogenase (oxaloacetate-decarboxylating).


ensembl_gene_id: Noca_2038
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: Noca_2040
symbol: Noca_2040
gene_biotype: protein_coding
description:
  PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: cef:CE0204 putative transport protein.


ensembl_gene_id: Noca_2042
symbol: panB
gene_biotype: protein_coding
description:
  Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: Noca_2043
symbol: Noca_2043
gene_biotype: protein_coding
description:
  PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mmc:Mmcs_4099 methyltransferase type 11.


ensembl_gene_id: Noca_2044
symbol: nadE
gene_biotype: protein_coding
description:
  NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: Noca_2046
symbol: Noca_2046
gene_biotype: protein_coding
description:
  PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp; KEGG: sco:SCO2241 probable glutamine synthetase.


ensembl_gene_id: Noca_2048
symbol: glnE
gene_biotype: protein_coding
description:
  (Glutamate--ammonia-ligase) adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal tra [...]


ensembl_gene_id: Noca_2051
symbol: Noca_2051
gene_biotype: protein_coding
description:
  Transcriptional regulator, MarR family; PFAM: regulatory protein, MarR; KEGG: rha:RHA1_ro01019 probable transcriptional regulator, MarR family.


ensembl_gene_id: Noca_2052
symbol: Noca_2052
gene_biotype: protein_coding
description:
  PFAM: NADP oxidoreductase, coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: cgb:cg1421 putative dinucleotide-binding enzyme.


ensembl_gene_id: Noca_2062
symbol: Noca_2062
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: fra:Francci3_2401 two component transcriptional regulator, winged helix family.


ensembl_gene_id: Noca_2063
symbol: Noca_2063
gene_biotype: protein_coding
description:
  PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: gsu:GSU0452 sensor histidine kinase.


ensembl_gene_id: Noca_2065
symbol: Noca_2065
gene_biotype: protein_coding
description:
  PFAM: glycosyl transferase, group 1; KEGG: rxy:Rxyl_2620 phosphatidyl-myo-inositol alpha-mannosyltransferase.


ensembl_gene_id: Noca_2067
symbol: Noca_2067
gene_biotype: protein_coding
description:
  PFAM: CDP-alcohol phosphatidyltransferase; KEGG: sco:SCO3457 transmembrane protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: Noca_2069
symbol: Noca_2069
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cyb:CYB_0132 ABC transporter, permease protein.


ensembl_gene_id: Noca_2070
symbol: Noca_2070
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO3454 putative ABC-transporter membrane protein.


ensembl_gene_id: Noca_2071
symbol: Noca_2071
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mmc:Mmcs_5124 ABC transporter related; Belongs to the ABC transporter superfamily.


ensembl_gene_id: Noca_2073
symbol: Noca_2073
gene_biotype: protein_coding
description:
  Pyridine nucleotide-disulfide oxidoreductase dimerization region; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: sco:SCO3443 putative pyridine nucleotide-disulphide oxidoreductase.


ensembl_gene_id: Noca_2075
symbol: Noca_2075
gene_biotype: protein_coding
description:
  PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: mpa:MAP2941c hypothetical protein.


ensembl_gene_id: Noca_2084
symbol: Noca_2084
gene_biotype: protein_coding
description:
  PFAM: cyclic nucleotide-binding; SMART: regulatory protein, Crp; KEGG: mtc:MT1714 transcriptional regulator, Crp/Fnr family.


ensembl_gene_id: Noca_2088
symbol: Noca_2088
gene_biotype: protein_coding
description:
  PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: sco:SCO3460 putative mercuric dehydrogenase.


ensembl_gene_id: Noca_2090
symbol: Noca_2090
gene_biotype: protein_coding
description:
  PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: sco:SCO3450 putative RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: Noca_2091
symbol: Noca_2091
gene_biotype: protein_coding
description:
  PFAM: transcriptional regulator domain protein; GAF domain protein; KEGG: sma:SAV7178 transcriptional regulator.


ensembl_gene_id: Noca_2092
symbol: Noca_2092
gene_biotype: protein_coding
description:
  PFAM: aldehyde dehydrogenase; KEGG: sma:SAV7177 putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: Noca_2095
symbol: Noca_2095
gene_biotype: protein_coding
description:
  PFAM: aldehyde dehydrogenase; KEGG: nfa:nfa3930 putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: Noca_2097
symbol: Noca_2097
gene_biotype: protein_coding
description:
  PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; KEGG: abo:ABO_1174 GMC oxidoreductase family protein.


ensembl_gene_id: Noca_2105
symbol: Noca_2105
gene_biotype: protein_coding
description:
  2-oxo-acid dehydrogenase E1 component homodimeric type; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: Noca_2106
symbol: Noca_2106
gene_biotype: protein_coding
description:
  Transcriptional regulator, ArsR family; PFAM: regulatory protein, ArsR; KEGG: rha:RHA1_ro08261 possible transcriptional regulator, MarR family.


ensembl_gene_id: Noca_2110
symbol: Noca_2110
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_3016 ABC transporter related; TC 3.A.1.4.-.


ensembl_gene_id: Noca_2111
symbol: Noca_2111
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbr:BB1157 high-affinity branched-chain amino acid transport ATP-binding protein; TC 3.A.1.4.-.


ensembl_gene_id: Noca_2112
symbol: Noca_2112
gene_biotype: protein_coding
description:
  PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A2754 ABC branched chain amino acid family transporter, inner membrane subunit; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Noca_2113
symbol: Noca_2113
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; KEGG: mes:Meso_0478 inner-membrane translocator; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Noca_2114
symbol: Noca_2114
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: tfu:Tfu_1779 hypothetical protein; TC 3.A.1.4.-.


ensembl_gene_id: Noca_2117
symbol: Noca_2117
gene_biotype: protein_coding
description:
  RNA polymerase, sigma subunit, ECF family; PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; KEGG: mxa:MXAN_5731 RNA polymerase sigma-70 factor, ECF subfamily.


ensembl_gene_id: Noca_2124
symbol: Noca_2124
gene_biotype: protein_coding
description:
  PFAM: high-affinity nickel-transporter; KEGG: mpa:MAP2924 NicT; Belongs to the NiCoT transporter (TC 2.A.52) family.


ensembl_gene_id: Noca_2127
symbol: Noca_2127
gene_biotype: protein_coding
description:
  PFAM: Enoyl-CoA hydratase/isomerase; KEGG: nfa:nfa10390 putative enoyl-CoA hydratase/isomerase family protein.


ensembl_gene_id: Noca_2128
symbol: Noca_2128
gene_biotype: protein_coding
description:
  PFAM: cobalamin B12-binding domain protein; KEGG: hwa:HQ2301A methylmalonyl-CoA mutase, subunit B (cobalamin-binding subunit).


ensembl_gene_id: Noca_2130
symbol: Noca_2130
gene_biotype: protein_coding
description:
  LAO/AO transport system ATPase; KEGG: pfu:PF1947 hypothetical protein; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; SMART: AAA ATPase.


ensembl_gene_id: Noca_2131
symbol: Noca_2131
gene_biotype: protein_coding
description:
  methylmalonyl-CoA mutase; KEGG: pho:PH1306 563aa long hypothetical methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase.


ensembl_gene_id: Noca_2132
symbol: Noca_2132
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: mmc:Mmcs_4384 GntR-like protein.


ensembl_gene_id: Noca_2134
symbol: Noca_2134
gene_biotype: protein_coding
description:
  PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rha:RHA1_ro01381 possible ferredoxin--NAD(+) reductase.


ensembl_gene_id: Noca_2135
symbol: Noca_2135
gene_biotype: protein_coding
description:
  PFAM: Rieske [2Fe-2S] domain protein; KEGG: sma:SAV6327 ferredoxin subunit of phenylpropionate dioxygenase.


ensembl_gene_id: Noca_2136
symbol: Noca_2136
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pfl:PFL_3855 cis-1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase.


ensembl_gene_id: Noca_2137
symbol: Noca_2137
gene_biotype: protein_coding
description:
  PFAM: Rieske [2Fe-2S] domain protein; KEGG: fal:FRAAL6167 hypothetical protein; putative dioxygenase.


ensembl_gene_id: Noca_2140
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: Noca_2145
symbol: Noca_2145
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tth:TTC0600 branched-chain amino acid transport ATP-binding protein livF; TC 3.A.1.4.-.


ensembl_gene_id: Noca_2146
symbol: Noca_2146
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport system permease protein; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: rpd:RPD_1891 ABC transporter related; TC 3.A.1.4.-; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Noca_2147
symbol: Noca_2147
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; KEGG: bbr:BB4292 branched-chain amino acid transport system permease; TC 3.A.1.4.-.


ensembl_gene_id: Noca_2148
symbol: Noca_2148
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: gsu:GSU1734 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative; TC 3.A.1.4.-.


ensembl_gene_id: Noca_2149
symbol: Noca_2149
gene_biotype: protein_coding
description:
  4-hydroxy-2-oxovalerate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family.


ensembl_gene_id: Noca_2152
symbol: Noca_2152
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rha:RHA1_ro04549 transcriptional regulator, LysR family.


ensembl_gene_id: Noca_2155
symbol: Noca_2155
gene_biotype: protein_coding
description:
  D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein; KEGG: rha:RHA1_ro03236 probable D-lactate dehydrogenase (cytochrome).


ensembl_gene_id: Noca_2158
symbol: Noca_2158
gene_biotype: protein_coding
description:
  Formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: nph:NP6182A predicted crotonobetainyl-CoA:carnitine CoA-transferase/alpha-methylacyl-CoA racemase 1; Belongs to the CoA-transferase III family.


ensembl_gene_id: Noca_2159
symbol: Noca_2159
gene_biotype: protein_coding
description:
  3-hydroxyisobutyrate dehydrogenase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: rpb:RPB_2122 3-hydroxyisobutyrate dehydrogenase.


ensembl_gene_id: Noca_2160
symbol: Noca_2160
gene_biotype: protein_coding
description:
  PFAM: aldehyde dehydrogenase; KEGG: rha:RHA1_ro05333 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: Noca_2169
symbol: Noca_2169
gene_biotype: protein_coding
description:
  TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: sma:SAV5831 multidrug-efflux transporter.


ensembl_gene_id: Noca_2176
symbol: Noca_2176
gene_biotype: protein_coding
description:
  PFAM: helix-turn-helix domain protein; KEGG: rha:RHA1_ro11274 possible repressor protein, helix-turn-helix family.


ensembl_gene_id: Noca_2178
symbol: Noca_2178
gene_biotype: protein_coding
description:
  PFAM: phage integrase family protein; KEGG: pfo:Pfl_1025 tyrosine recombinase XerD; Belongs to the 'phage' integrase family.


ensembl_gene_id: Noca_2183
symbol: Noca_2183
gene_biotype: protein_coding
description:
  PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: fra:Francci3_4105 alcohol dehydrogenase, zinc-binding.


ensembl_gene_id: Noca_2186
symbol: Noca_2186
gene_biotype: protein_coding
description:
  PFAM: regulatory protein, TetR; KEGG: fal:FRAAL3510 putative TetR-family transcriptional regulator (partial match).


ensembl_gene_id: Noca_2191
symbol: Noca_2191
gene_biotype: protein_coding
description:
  NmrA family protein; PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; KEGG: ret:RHE_PC00048 hypothetical protein.


ensembl_gene_id: Noca_2195
symbol: Noca_2195
gene_biotype: protein_coding
description:
  phosphatidyl-N-methylethanolamine N-methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rxy:Rxyl_0122 methyltransferase type 11.


ensembl_gene_id: Noca_2199
symbol: Noca_2199
gene_biotype: protein_coding
description:
  PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: tfu:Tfu_2703 putative cytochrome c biogenesis membrane protein.


ensembl_gene_id: Noca_2203
symbol: Noca_2203
gene_biotype: protein_coding
description:
  PFAM: Redoxin domain protein; Thioredoxin domain; KEGG: ttj:TTHA1728 cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE.


ensembl_gene_id: Noca_2204
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: Noca_2206
symbol: lspA
gene_biotype: protein_coding
description:
  Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: Noca_2207
symbol: Noca_2207
gene_biotype: protein_coding
description:
  Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: nfa:pnf1330 putative cation-transporting ATPase.


ensembl_gene_id: Noca_2210
symbol: Noca_2210
gene_biotype: protein_coding
description:
  PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: shm:Shewmr7_2345 methyltransferase type 11.


ensembl_gene_id: Noca_2211
symbol: Noca_2211
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV4541 putative ABC transporter ATP-binding protein.


ensembl_gene_id: Noca_2216
symbol: Noca_2216
gene_biotype: protein_coding
description:
  TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: nfa:nfa52310 putative cation transporter.


ensembl_gene_id: Noca_2222
symbol: Noca_2222
gene_biotype: protein_coding
description:
  PFAM: type II secretion system protein E; KEGG: rha:RHA1_ro10045 possible type II/IV secretion system protein.


ensembl_gene_id: Noca_2246
symbol: Noca_2246
gene_biotype: protein_coding
description:
  Type IV secretory pathway VirD4 components-like protein; KEGG: fra:Francci3_2361 putative membrane protein.


ensembl_gene_id: Noca_2262
symbol: Noca_2262
gene_biotype: protein_coding
description:
  PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: mle:ML2684 single strand binding protein.


ensembl_gene_id: Noca_2265
symbol: Noca_2265
gene_biotype: protein_coding
description:
  PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: fra:Francci3_3532 phage integrase; Belongs to the 'phage' integrase family.


ensembl_gene_id: Noca_2268
symbol: Noca_2268
gene_biotype: protein_coding
description:
  TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: sma:SAV2631 putative DNA processing Smf-family protein.


ensembl_gene_id: Noca_2278
symbol: Noca_2278
gene_biotype: protein_coding
description:
  PFAM: sigma-70 region 4 domain protein; KEGG: sme:SMc03873 putative RNA polymerase sigma factor protein.


ensembl_gene_id: Noca_2280
symbol: Noca_2280
gene_biotype: protein_coding
description:
  PFAM: helicase domain protein; type III restriction enzyme, res subunit; restriction endonuclease; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: sus:Acid_1698 type III restriction enzyme, res subunit.


ensembl_gene_id: Noca_2283
symbol: Noca_2283
gene_biotype: protein_coding
description:
  T/G mismatch-specific endonuclease; PFAM: DNA mismatch endonuclease vsr; KEGG: hch:HCH_10021 DNA G:T-mismatch repair endonuclease.


ensembl_gene_id: Noca_2284
symbol: Noca_2284
gene_biotype: protein_coding
description:
  KEGG: ngo:NGO1209 DNA cytosine methyltransferase M.NgoMIII; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.


ensembl_gene_id: Noca_2293
symbol: Noca_2293
gene_biotype: protein_coding
description:
  PFAM: phage integrase family protein; KEGG: sco:SCO5633 traSA:integrase fusion protein; Belongs to the 'phage' integrase family.


ensembl_gene_id: Noca_2295
symbol: Noca_2295
gene_biotype: protein_coding
description:
  KEGG: pac:PPA0671 glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp.


ensembl_gene_id: Noca_2299
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: Noca_2300
symbol: lipB
gene_biotype: protein_coding
description:
  Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: Noca_2302
symbol: Noca_2302
gene_biotype: protein_coding
description:
  PFAM: dihydrodipicolinate reductase; NAD-dependent epimerase/dehydratase; domain of unknown function DUF1731; KEGG: nfa:nfa16890 putative epimerase.


ensembl_gene_id: Noca_2303
symbol: Noca_2303
gene_biotype: protein_coding
description:
  2-oxoglutarate dehydrogenase E2 component; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: rha:RHA1_ro01151 probable dihydrolipoyllysine-residue succinyltransferase.


ensembl_gene_id: Noca_2304
symbol: Noca_2304
gene_biotype: protein_coding
description:
  TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: tfu:Tfu_0994 dihydrolipoamide dehydrogenase.


ensembl_gene_id: Noca_2307
symbol: Noca_2307
gene_biotype: protein_coding
description:
  TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein, C-terminal barrel; KEGG: fra:Francci3_3132 glycine cleavage system T protein.


ensembl_gene_id: Noca_2310
symbol: Noca_2310
gene_biotype: protein_coding
description:
  TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: pst:PSPTO_2623 phenazine biosynthesis protein, PhzF family.


ensembl_gene_id: Noca_2311
symbol: thyA
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: Noca_2312
symbol: Noca_2312
gene_biotype: protein_coding
description:
  Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.


ensembl_gene_id: Noca_2315
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: Noca_2316
symbol: rnj
gene_biotype: protein_coding
description:
  Beta-lactamase domain protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: Noca_2319
symbol: rimO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: Noca_2320
symbol: Noca_2320
gene_biotype: protein_coding
description:
  TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: pac:PPA1007 phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: Noca_2321
symbol: Noca_2321
gene_biotype: protein_coding
description:
  PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: cgb:cg0397 probable 5'-nucleotidase precursor; Belongs to the 5'-nucleotidase family.


ensembl_gene_id: Noca_2324
symbol: Noca_2324
gene_biotype: protein_coding
description:
  PFAM: CinA domain protein; KEGG: fal:FRAAL5732 competence-inducible (CinA-like) protein; Belongs to the CinA family.


ensembl_gene_id: Noca_2329
symbol: Noca_2329
gene_biotype: protein_coding
description:
  ATP dependent helicase, Lhr family; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases-like; KEGG: fra:Francci3_3527 DEAD/DEAH box helicase-like.


ensembl_gene_id: Noca_2332
symbol: Noca_2332
gene_biotype: protein_coding
description:
  Transcriptional regulator, TetR family; PFAM: regulatory protein, TetR; KEGG: rha:RHA1_ro06052 possible transcriptional regulator.


ensembl_gene_id: Noca_2337
symbol: Noca_2337
gene_biotype: protein_coding
description:
  PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rha:RHA1_ro01206 hypothetical protein.


ensembl_gene_id: Noca_2341
symbol: recA
gene_biotype: protein_coding
description:
  RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: Noca_2349
symbol: Noca_2349
gene_biotype: protein_coding
description:
  Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.


ensembl_gene_id: Noca_2351
symbol: Noca_2351
gene_biotype: protein_coding
description:
  PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: sco:SCO6102 putative nitrite/sulphite reductase.


ensembl_gene_id: Noca_2352
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: Noca_2353
symbol: Noca_2353
gene_biotype: protein_coding
description:
  PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: sma:SAV2123 putative acyl-CoA dehydrogenase.


ensembl_gene_id: Noca_2355
symbol: Noca_2355
gene_biotype: protein_coding
description:
  PFAM: TrkA-N domain protein; Ion transport 2 domain protein,; KEGG: pac:PPA1165 ion channel membrane protein.


ensembl_gene_id: Noca_2356
symbol: Noca_2356
gene_biotype: protein_coding
description:
  TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: dra:DR2419 sensory box sensor histidine kinase.


ensembl_gene_id: Noca_2358
symbol: Noca_2358
gene_biotype: protein_coding
description:
  PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: rfr:Rfer_2184 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate.


ensembl_gene_id: Noca_2359
symbol: Noca_2359
gene_biotype: protein_coding
description:
  Pyruvate ferredoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; KEGG: rfr:Rfer_2185 thiamine pyrophosphate enzyme-like TPP-binding.


ensembl_gene_id: Noca_2360
symbol: Noca_2360
gene_biotype: protein_coding
description:
  Pyruvate ferredoxin oxidoreductase, alpha subunit; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: rfr:Rfer_2186 pyruvate flavodoxin/ferredoxin oxidoreductase-like.


ensembl_gene_id: Noca_2361
symbol: Noca_2361
gene_biotype: protein_coding
description:
  TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: rfr:Rfer_2187 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate.


ensembl_gene_id: Noca_2363
symbol: Noca_2363
gene_biotype: protein_coding
description:
  PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_3405 alcohol dehydrogenase GroES-like protein.


ensembl_gene_id: Noca_2364
symbol: Noca_2364
gene_biotype: protein_coding
description:
  Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; KEGG: plu:plu2127 hypothetical protein.


ensembl_gene_id: Noca_2368
symbol: Noca_2368
gene_biotype: protein_coding
description:
  PFAM: sporulation and cell division protein SsgA; KEGG: fra:Francci3_1359 sporulation and cell division protein SsgA.


ensembl_gene_id: Noca_2370
symbol: thrS
gene_biotype: protein_coding
description:
  Ser-tRNA(Thr) hydrolase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). Also edits incorrectly charged L-seryl-tRNA(Thr).


ensembl_gene_id: Noca_2375
symbol: xylA
gene_biotype: protein_coding
description:
  Xylose isomerase; KEGG: sma:SAV7182 putative xylose isomerase; TIGRFAM: xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel; Belongs to the xylose isomerase family.


ensembl_gene_id: Noca_2376
symbol: Noca_2376
gene_biotype: protein_coding
description:
  Monosaccharide ABC transporter substrate-binding protein, CUT2 family; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sma:SAV2247 putative periplasmic solute-binding protein; TC 3.A.1.2.-.


ensembl_gene_id: Noca_2377
symbol: Noca_2377
gene_biotype: protein_coding
description:
  Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO6010 probable ABC-transport system ATP binding protein; TC 3.A.1.2.-.


ensembl_gene_id: Noca_2378
symbol: Noca_2378
gene_biotype: protein_coding
description:
  PFAM: inner-membrane translocator; KEGG: tfu:Tfu_1920 putative ABC transporter transmembrane transport protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Noca_2380
symbol: Noca_2380
gene_biotype: protein_coding
description:
  CDP-diacylglycerol inositol 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: sma:SAV6826 putative membrane transferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: Noca_2381
symbol: pdxS
gene_biotype: protein_coding
description:
  Pyridoxal phosphate synthase yaaD subunit; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.


ensembl_gene_id: Noca_2382
symbol: pdxT
gene_biotype: protein_coding
description:
  Pyridoxal phosphate synthase yaaE subunit; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.


ensembl_gene_id: Noca_2385
symbol: ruvC
gene_biotype: protein_coding
description:
  Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: Noca_2386
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: Noca_2387
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: Noca_2388
symbol: Noca_2388
gene_biotype: protein_coding
description:
  TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: ccr:CC1992 preprotein translocase, YajC subunit.


ensembl_gene_id: Noca_2389
symbol: secD
gene_biotype: protein_coding
description:
  Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: Noca_2390
symbol: secF
gene_biotype: protein_coding
description:
  Protein translocase subunit secF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: Noca_2391
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: Noca_2392
symbol: Noca_2392
gene_biotype: protein_coding
description:
  RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: Noca_2397
symbol: Noca_2397
gene_biotype: protein_coding
description:
  KEGG: pac:PPA1169 histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase, class II (G, H, P and S); Anticodon-binding domain protein.


ensembl_gene_id: Noca_2398
symbol: aspS-2
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: Noca_2399
symbol: Noca_2399
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO5476 oligopeptide transport integral membrane protein.


ensembl_gene_id: Noca_2400
symbol: Noca_2400
gene_biotype: protein_coding
description:
  PFAM: extracellular solute-binding protein, family 5; KEGG: sma:SAV3151 ABC transporter protein BldKB.


ensembl_gene_id: Noca_2401
symbol: Noca_2401
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV3152 putative ABC transporter membrane protein BldKC.


ensembl_gene_id: Noca_2402
symbol: Noca_2402
gene_biotype: protein_coding
description:
  Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: sma:SAV2766 putative ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.


ensembl_gene_id: Noca_2403
symbol: Noca_2403
gene_biotype: protein_coding
description:
  KEGG: sco:SCO5116 putative peptide transport system ATP-binding subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.


ensembl_gene_id: Noca_2404
symbol: Noca_2404
gene_biotype: protein_coding
description:
  Recombination protein MgsA; PFAM: magnesium chelatase, ChlI subunit; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: sco:SCO1506 conserved ATP/GTP binding protein.


ensembl_gene_id: Noca_2407
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: Noca_2408
symbol: Noca_2408
gene_biotype: protein_coding
description:
  Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.


ensembl_gene_id: Noca_2409
symbol: mltG
gene_biotype: protein_coding
description:
  Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.


ensembl_gene_id: Noca_2410
symbol: Noca_2410
gene_biotype: protein_coding
description:
  PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding, N-terminal domain protein; KEGG: sma:SAV6853 putative shikimate 5-dehydrogenase; Belongs to the shikimate dehydrogenase family.


ensembl_gene_id: Noca_2412
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: Noca_2413
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: Noca_2414
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: Noca_2415
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: Noca_2416
symbol: Noca_2416
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF541; KEGG: bmb:BruAb1_1470 Omp28, immunoreactive 28 kDa outer membrane protein.


ensembl_gene_id: Noca_2417
symbol: efp
gene_biotype: protein_coding
description:
  Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: Noca_2418
symbol: nusB
gene_biotype: protein_coding
description:
  NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: Noca_2419
symbol: Noca_2419
gene_biotype: protein_coding
description:
  PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: sco:SCO3443 putative pyridine nucleotide-disulphide oxidoreductase.


ensembl_gene_id: Noca_2422
symbol: Noca_2422
gene_biotype: protein_coding
description:
  PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_2351 alcohol dehydrogenase, zinc-binding protein.


ensembl_gene_id: Noca_2423
symbol: Noca_2423
gene_biotype: protein_coding
description:
  Arginine:ornithine antiporter, APA family; TIGRFAM: arginine/ornithine antiporter; PFAM: amino acid permease-associated region; KEGG: hch:HCH_05491 amino acid transporters; TC 2.A.3.2.3.


ensembl_gene_id: Noca_2425
symbol: argF
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.


ensembl_gene_id: Noca_2426
symbol: Noca_2426
gene_biotype: protein_coding
description:
  KEGG: pau:PA14_68350 carbamate kinase; TIGRFAM: carbamate kinase; PFAM: aspartate/glutamate/uridylate kinase; Belongs to the carbamate kinase family.


ensembl_gene_id: Noca_2427
symbol: pyrR
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.


ensembl_gene_id: Noca_2428
symbol: pyrB
gene_biotype: protein_coding
description:
  TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; KEGG: sco:SCO1487 aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: Noca_2429
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: Noca_2430
symbol: carA
gene_biotype: protein_coding
description:
  KEGG: sco:SCO1484 carbamoyl-phosphate synthase, pyrimidine-specific, small chain; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase, small chain; Belongs to the CarA family.


ensembl_gene_id: Noca_2431
symbol: carB
gene_biotype: protein_coding
description:
  TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain, oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; RimK domain protein ATP-grasp; KEGG: sco:SCO1483 carbamoylphosphate synthetase large chain; Belongs to the CarB family.


ensembl_gene_id: Noca_2432
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: Noca_2433
symbol: pyrF
gene_biotype: protein_coding
description:
  TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: sma:SAV6869 putative orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily.


ensembl_gene_id: Noca_2437
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: Noca_2438
symbol: Noca_2438
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase / Phosphopantothenate-cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: Noca_2439
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: Noca_2440
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N' (replication factor Y) (superfamily II helicase); Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: Noca_2441
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: Noca_2442
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: Noca_2443
symbol: Noca_2443
gene_biotype: protein_coding
description:
  PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: sco:SCO1472 conserved hypothetical Sun-family protein SCL6.29c; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: Noca_2446
symbol: Noca_2446
gene_biotype: protein_coding
description:
  PFAM: ribulose-phosphate 3-epimerase; KEGG: sco:SCO1464 ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.


ensembl_gene_id: Noca_2447
symbol: Noca_2447
gene_biotype: protein_coding
description:
  Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: Noca_2448
symbol: Noca_2448
gene_biotype: protein_coding
description:
  TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein; KEGG: sma:SAV6902 putative riboflavin synthase.


ensembl_gene_id: Noca_2449
symbol: ribBA
gene_biotype: protein_coding
description:
  3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: Noca_2450
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: Noca_2451
symbol: hisE
gene_biotype: protein_coding
description:
  PFAM: phosphoribosyl-ATP pyrophosphohydrolase; KEGG: lxx:Lxx11210 phosphoribosyl-ATP pyrophosphatase.


ensembl_gene_id: Noca_2452
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase (homohexameric); Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily.


ensembl_gene_id: Noca_2459
symbol: infC
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: Noca_2460
symbol: rpmI
gene_biotype: protein_coding
description:
  PFAM: ribosomal protein L35; KEGG: sma:SAV6738 putative ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.


ensembl_gene_id: Noca_2461
symbol: rplT
gene_biotype: protein_coding
description:
  LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: Noca_2462
symbol: Noca_2462
gene_biotype: protein_coding
description:
  PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase, substrate binding; KEGG: sma:SAV6740 putative rRNA methylase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: Noca_2463
symbol: Noca_2463
gene_biotype: protein_coding
description:
  PFAM: glycoside hydrolase, family 31; KEGG: rxy:Rxyl_2586 glycoside hydrolase, family 31; Belongs to the glycosyl hydrolase 31 family.


ensembl_gene_id: Noca_2464
symbol: Noca_2464
gene_biotype: protein_coding
description:
  PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: sco:SCO1596 two-component sensor.


ensembl_gene_id: Noca_2465
symbol: pheS
gene_biotype: protein_coding
description:
  KEGG: tfu:Tfu_2061 phenylalanyl-tRNA synthetase, alpha subunit; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase, class IIc; aminoacyl tRNA synthetase, class II domain protein; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: Noca_2466
symbol: pheT
gene_biotype: protein_coding
description:
  TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: sma:SAV6743 putative phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: Noca_2468
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: Noca_2469
symbol: argJ
gene_biotype: protein_coding
description:
  N-acetylglutamate synthase / glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: Noca_2470
symbol: argB
gene_biotype: protein_coding
description:
  N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: Noca_2471
symbol: argD
gene_biotype: protein_coding
description:
  TIGRFAM: acetylornithine and succinylornithine aminotransferases; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class-III; KEGG: nfa:nfa19390 putative acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: Noca_2474
symbol: argG
gene_biotype: protein_coding
description:
  PFAM: argininosuccinate synthase; KEGG: sco:SCO7036 argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily.


ensembl_gene_id: Noca_2476
symbol: Noca_2476
gene_biotype: protein_coding
description:
  TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG); KEGG: sma:SAV6486 putative 3-methyladenine DNA glycosylase; Belongs to the DNA glycosylase MPG family.


ensembl_gene_id: Noca_2477
symbol: Noca_2477
gene_biotype: protein_coding
description:
  PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: tfu:Tfu_2039 hypothetical protein.


ensembl_gene_id: Noca_2479
symbol: Noca_2479
gene_biotype: protein_coding
description:
  TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sma:SAV6490 hydrolase.


ensembl_gene_id: Noca_2480
symbol: Noca_2480
gene_biotype: protein_coding
description:
  TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: sco:SCO1782 putative membrane protein.


ensembl_gene_id: Noca_2481
symbol: nadK
gene_biotype: protein_coding
description:
  NAD(+) kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: Noca_2485
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: Noca_2488
symbol: Noca_2488
gene_biotype: protein_coding
description:
  TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; KEGG: sma:SAV6507 putative L-alanine dehydrogenase; Belongs to the AlaDH/PNT family.


ensembl_gene_id: Noca_2489
symbol: xerD
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerD subunit; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: Noca_2490
symbol: Noca_2490
gene_biotype: protein_coding
description:
  PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: nfa:nfa37840 putative helicase.


ensembl_gene_id: Noca_2491
symbol: Noca_2491
gene_biotype: protein_coding
description:
  PFAM: glycoside hydrolase, family 26; KEGG: bfs:BF0771 putative mannosidase; Belongs to the glycosyl hydrolase 26 family.


ensembl_gene_id: Noca_2495
symbol: Noca_2495
gene_biotype: protein_coding
description:
  Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: Noca_2496
symbol: Noca_2496
gene_biotype: protein_coding
description:
  Condensin subunit ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: Noca_2497
symbol: Noca_2497
gene_biotype: protein_coding
description:
  PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: pac:PPA1385 ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: Noca_2499
symbol: Noca_2499
gene_biotype: protein_coding
description:
  TIGRFAM: chorismate mutase; PFAM: Chorismate mutase of the AroH class; KEGG: sma:SAV6520 putative chorismate mutase.


ensembl_gene_id: Noca_2500
symbol: Noca_2500
gene_biotype: protein_coding
description:
  Prephenate dehydrogenase; PFAM: amino acid-binding ACT domain protein; Prephenate dehydrogenase; KEGG: lxx:Lxx05720 prephenate dehydrogenase.


ensembl_gene_id: Noca_2501
symbol: cmk
gene_biotype: protein_coding
description:
  Cytidylate kinase; KEGG: sma:SAV6522 putative cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region.


ensembl_gene_id: Noca_2503
symbol: der
gene_biotype: protein_coding
description:
  Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: Noca_2507
symbol: Noca_2507
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: nar:Saro_2963 short-chain dehydrogenase/reductase SDR.


ensembl_gene_id: Noca_2508
symbol: Noca_2508
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rha:RHA1_ro04763 short-chain dehydrogenase.


ensembl_gene_id: Noca_2509
symbol: cobQ
gene_biotype: protein_coding
description:
  Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: Noca_2510
symbol: Noca_2510
gene_biotype: protein_coding
description:
  Adenosylcobinamide kinase; PFAM: cobalbumin biosynthesis enzyme; KEGG: mbo:Mb0260c putative bifunctional cobalamin biosynthesis protein CobU: cobinamide kinase + cobinamide phosphate guanylyltransferase.


ensembl_gene_id: Noca_2511
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: Noca_2512
symbol: cobT
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: Noca_2516
symbol: Noca_2516
gene_biotype: protein_coding
description:
  PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rha:RHA1_ro04692 acyl-CoA dehydrogenase.


ensembl_gene_id: Noca_2518
symbol: Noca_2518
gene_biotype: protein_coding
description:
  PFAM: Rieske [2Fe-2S] domain protein; KEGG: rha:RHA1_ro04538 ketosteroid-9-alpha-hydroxylase, oxygenase.


ensembl_gene_id: Noca_2520
symbol: Noca_2520
gene_biotype: protein_coding
description:
  PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: nfa:nfa50680 putative oxidoreductase.


ensembl_gene_id: Noca_2524
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: Noca_2526
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: Noca_2528
symbol: Noca_2528
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0052 and CofD; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.


ensembl_gene_id: Noca_2530
symbol: Noca_2530
gene_biotype: protein_coding
description:
  KEGG: cdi:DIP1310 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: Noca_2531
symbol: pgk
gene_biotype: protein_coding
description:
  PFAM: phosphoglycerate kinase; KEGG: sco:SCO1946 phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.


ensembl_gene_id: Noca_2532
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: Noca_2533
symbol: Noca_2533
gene_biotype: protein_coding
description:
  Protein translocase subunit secG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: Noca_2534
symbol: rbpA
gene_biotype: protein_coding
description:
  Electron transport protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.


ensembl_gene_id: Noca_2538
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: Noca_2539
symbol: Noca_2539
gene_biotype: protein_coding
description:
  PFAM: phosphoglucose isomerase (PGI); KEGG: lxx:Lxx11600 glucose-6-phosphate isomerase; Belongs to the GPI family.


ensembl_gene_id: Noca_2540
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.


ensembl_gene_id: Noca_2541
symbol: Noca_2541
gene_biotype: protein_coding
description:
  TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase, central region; KEGG: rha:RHA1_ro07186 transketolase; Belongs to the transketolase family.


ensembl_gene_id: Noca_2542
symbol: ctaB
gene_biotype: protein_coding
description:
  Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.


ensembl_gene_id: Noca_2545
symbol: Noca_2545
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO1928 putative ABC transporter, ATP-binding subunit.


ensembl_gene_id: Noca_2549
symbol: Noca_2549
gene_biotype: protein_coding
description:
  Transcriptional regulator, ArsR family; PFAM: HMG-I and HMG-Y, DNA-binding domain protein; regulatory protein, ArsR; Helix-turn-helix, type 11 domain protein; KEGG: sma:SAV6324 DNA-binding protein.


ensembl_gene_id: Noca_2550
symbol: Noca_2550
gene_biotype: protein_coding
description:
  Iron-regulated ABC transporter membrane component SufB; TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: sco:SCO1925 hypothetical protein.


ensembl_gene_id: Noca_2551
symbol: Noca_2551
gene_biotype: protein_coding
description:
  Iron-regulated ABC transporter permease protein SufD; TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: sco:SCO1924 hypothetical protein.


ensembl_gene_id: Noca_2553
symbol: Noca_2553
gene_biotype: protein_coding
description:
  KEGG: pac:PPA1546 ABC transporter ATP-binding protein; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase.


ensembl_gene_id: Noca_2554
symbol: Noca_2554
gene_biotype: protein_coding
description:
  TIGRFAM: cysteine desulfurases, SufS subfamily; PFAM: aminotransferase, class V; KEGG: sma:SAV6329 putative cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: Noca_2555
symbol: Noca_2555
gene_biotype: protein_coding
description:
  TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: fra:Francci3_1665 SUF system FeS assembly protein.


ensembl_gene_id: Noca_2562
symbol: Noca_2562
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function, zinc metallopeptidase putative; KEGG: mmc:Mmcs_2304 protein of unknown function, zinc metallopeptidase putative.


ensembl_gene_id: Noca_2563
symbol: Noca_2563
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV6426 ABC transporter ATP-binding protein.


ensembl_gene_id: Noca_2564
symbol: Noca_2564
gene_biotype: protein_coding
description:
  PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sco:SCO1838 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Noca_2565
symbol: Noca_2565
gene_biotype: protein_coding
description:
  PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: fra:Francci3_1676 ABC transporter related.


ensembl_gene_id: Noca_2571
symbol: Noca_2571
gene_biotype: protein_coding
description:
  TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: lxx:Lxx11740 3-oxoacyl-[acyl-carrier protein] reductase.


ensembl_gene_id: Noca_2572
symbol: Noca_2572
gene_biotype: protein_coding
description:
  Enoyl-[acyl-carrier-protein] reductase (NADH); PFAM: short-chain dehydrogenase/reductase SDR; KEGG: fra:Francci3_1894 short-chain dehydrogenase/reductase SDR.


ensembl_gene_id: Noca_2574
symbol: Noca_2574
gene_biotype: protein_coding
description:
  KEGG: sco:SCO1808 putative phosphoserine phosphatase; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: amino acid-binding ACT domain protein; Haloacid dehalogenase domain protein hydrolase; Haloacid dehalogenase domain protein hydrolase, type 3.


ensembl_gene_id: Noca_2576
symbol: Noca_2576
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nfa:nfa42910 putative ABC transporter ATP-binding protein.


ensembl_gene_id: Noca_2583
symbol: Noca_2583
gene_biotype: protein_coding
description:
  PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: cya:CYA_0909 glycerophosphoryl diester phosphodiesterase family protein.


ensembl_gene_id: Noca_2584
symbol: Noca_2584
gene_biotype: protein_coding
description:
  Peptidase C26; PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: mle:ML1573 possible amidotransferase.


ensembl_gene_id: Noca_2586
symbol: Noca_2586
gene_biotype: protein_coding
description:
  PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_2059 betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: Noca_2588
symbol: Noca_2588
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; Helix-turn-helix, type 11 domain protein; KEGG: sma:SAV6724 GntR-family transcriptional regulator.


ensembl_gene_id: Noca_2589
symbol: Noca_2589
gene_biotype: protein_coding
description:
  Amino acid/polyamine/organocation transporter, APC superfamily; PFAM: amino acid permease-associated region; KEGG: sco:SCO4097 amino acid/metabolite permease; TC 2.A.3.


ensembl_gene_id: Noca_2590
symbol: Noca_2590
gene_biotype: protein_coding
description:
  PFAM: Choline/ethanolamine kinase; aminoglycoside phosphotransferase; KEGG: mlo:mll5367 hypothetical protein.


ensembl_gene_id: Noca_2591
symbol: Noca_2591
gene_biotype: protein_coding
description:
  PFAM: FAD dependent oxidoreductase; glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein, C-terminal barrel; KEGG: bxe:Bxe_B1666 dehydrogenase; Belongs to the GcvT family.


ensembl_gene_id: Noca_2598
symbol: Noca_2598
gene_biotype: protein_coding
description:
  PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: sma:SAV4764 putative NAD(P)H-dependent FMN reductase.


ensembl_gene_id: Noca_2599
symbol: Noca_2599
gene_biotype: protein_coding
description:
  Phospholipid-binding protein, PBP family; PFAM: PEBP family protein; KEGG: tfu:Tfu_2116 YbhB and YbcL.


ensembl_gene_id: Noca_2600
symbol: Noca_2600
gene_biotype: protein_coding
description:
  TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: sma:SAV6796 uroporphyrin-III C-methyltransferase / precorrin-2 oxidase / ferrochelatase.


ensembl_gene_id: Noca_2603
symbol: Noca_2603
gene_biotype: protein_coding
description:
  PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rha:RHA1_ro06400 butyryl-CoA dehydrogenase.


ensembl_gene_id: Noca_2604
symbol: Noca_2604
gene_biotype: protein_coding
description:
  PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: pau:PA14_66040 putative acyl-CoA dehydrogenase.


ensembl_gene_id: Noca_2607
symbol: Noca_2607
gene_biotype: protein_coding
description:
  TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase, C terminal domain protein; KEGG: rha:RHA1_ro05490 galactokinase; Belongs to the GHMP kinase family. GalK subfamily.


ensembl_gene_id: Noca_2608
symbol: Noca_2608
gene_biotype: protein_coding
description:
  IMP dehydrogenase family protein; KEGG: sma:SAV6884 putative inosine monophosphate dehydrogenase; TIGRFAM: IMP dehydrogenase family protein; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase.


ensembl_gene_id: Noca_2609
symbol: Noca_2609
gene_biotype: protein_coding
description:
  TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: mmc:Mmcs_1356 choline/carnitine/betaine transport; Belongs to the BCCT transporter (TC 2.A.15) family.


ensembl_gene_id: Noca_2610
symbol: Noca_2610
gene_biotype: protein_coding
description:
  PFAM: LysR, substrate-binding; KEGG: rha:RHA1_ro06801 possible transcriptional regulator, LysR family.


ensembl_gene_id: Noca_2614
symbol: Noca_2614
gene_biotype: protein_coding
description:
  TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: pac:PPA2190 membrane-associated protein.


ensembl_gene_id: Noca_2618
symbol: Noca_2618
gene_biotype: protein_coding
description:
  PFAM: AMP-dependent synthetase and ligase; KEGG: rha:RHA1_ro03747 probable long-chain-fatty-acid--CoA ligase.


ensembl_gene_id: Noca_2619
symbol: Noca_2619
gene_biotype: protein_coding
description:
  PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: tfu:Tfu_2787 hypothetical protein.


ensembl_gene_id: Noca_2623
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: Noca_2624
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: Noca_2628
symbol: mshC
gene_biotype: protein_coding
description:
  cysteinyl-tRNA synthetase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily.


ensembl_gene_id: Noca_2631
symbol: Noca_2631
gene_biotype: protein_coding
description:
  Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.


ensembl_gene_id: Noca_2632
symbol: Noca_2632
gene_biotype: protein_coding
description:
  TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: lxx:Lxx08260 hydrolase.


ensembl_gene_id: Noca_2634
symbol: Noca_2634
gene_biotype: protein_coding
description:
  PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: rha:RHA1_ro06091 sensor kinase, two-component system.


ensembl_gene_id: Noca_2635
symbol: Noca_2635
gene_biotype: protein_coding
description:
  PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: dge:Dgeo_0555 two component transcriptional regulator, LuxR family.


ensembl_gene_id: Noca_2638
symbol: Noca_2638
gene_biotype: protein_coding
description:
  tRNA (adenine-58-N(1)-) methyltransferase; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA.


ensembl_gene_id: Noca_2639
symbol: arc
gene_biotype: protein_coding
description:
  Vesicle-fusing ATPase; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis.


ensembl_gene_id: Noca_2642
symbol: Noca_2642
gene_biotype: protein_coding
description:
  PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rha:RHA1_ro03999 hypothetical protein.


ensembl_gene_id: Noca_2643
symbol: Noca_2643
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF245 domain protein; protein of unknown function DUF275 domain protein; KEGG: sma:SAV6678 proteasome component.


ensembl_gene_id: Noca_2644
symbol: pup
gene_biotype: protein_coding
description:
  Protein of unknown function DUF797; Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation. Belongs to the prokaryotic ubiquitin-like protein family.


ensembl_gene_id: Noca_2645
symbol: prcB
gene_biotype: protein_coding
description:
  Proteasome endopeptidase complex, beta component, Threonine peptidase, MEROPS family T01B; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1B family.


ensembl_gene_id: Noca_2646
symbol: prcA
gene_biotype: protein_coding
description:
  20S proteasome, A and B subunits; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1A family.


ensembl_gene_id: Noca_2648
symbol: pafA
gene_biotype: protein_coding
description:
  Protein of unknown function DUF245 domain protein; Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side- chain amino group of a substrate lysine.


ensembl_gene_id: Noca_2649
symbol: Noca_2649
gene_biotype: protein_coding
description:
  PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: sma:SAV6686 FK-506 binding protein, peptidyl-prolyl cis-trans isomerase.


ensembl_gene_id: Noca_2652
symbol: tatA
gene_biotype: protein_coding
description:
  Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: Noca_2653
symbol: tatC
gene_biotype: protein_coding
description:
  Sec-independent protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: Noca_2656
symbol: Noca_2656
gene_biotype: protein_coding
description:
  PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DSH domain protein; SMART: DEAD-like helicases-like; KEGG: sco:SCO1631 putative helicase.


ensembl_gene_id: Noca_2659
symbol: Noca_2659
gene_biotype: protein_coding
description:
  PFAM: 5'-3' exonuclease; SMART: Helix-hairpin-helix domain protein, class 2; KEGG: sma:SAV6714 putative 5'-3' exonuclease.


ensembl_gene_id: Noca_2660
symbol: Noca_2660
gene_biotype: protein_coding
description:
  PFAM: regulatory protein, AsnC/Lrp family; KEGG: sco:SCO1425 putative AsnC-family transcriptional regulatory protein.


ensembl_gene_id: Noca_2661
symbol: Noca_2661
gene_biotype: protein_coding
description:
  L-lysine 2,3-aminomutase; PFAM: Radical SAM domain protein; KEGG: mxa:MXAN_4699 putative L-lysine 2,3-aminomutase.


ensembl_gene_id: Noca_2664
symbol: Noca_2664
gene_biotype: protein_coding
description:
  Beta-lysine 5,6-aminomutase beta subunit / D-lysine 5,6-aminomutase beta subunit; PFAM: cobalamin B12-binding domain protein; KEGG: rfr:Rfer_3887 cobalamin B12-binding.


ensembl_gene_id: Noca_2667
symbol: Noca_2667
gene_biotype: protein_coding
description:
  Dolichyl-phosphate beta-D-mannosyltransferase; PFAM: glycosyl transferase, family 2; KEGG: sco:SCO1423 glycosyl transferase.


ensembl_gene_id: Noca_2669
symbol: rbpA-2
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.


ensembl_gene_id: Noca_2671
symbol: Noca_2671
gene_biotype: protein_coding
description:
  PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: sma:SAV6927 putative glycerophosphoryl diester phosphodiesterase.


ensembl_gene_id: Noca_2672
symbol: Noca_2672
gene_biotype: protein_coding
description:
  PFAM: helix-turn-helix domain protein; EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: sco:SCO5998 putative UDP-N-acetylglucosamine transferase.


ensembl_gene_id: Noca_2673
symbol: Noca_2673
gene_biotype: protein_coding
description:
  PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: lxx:Lxx23600 alcohol dehydrogenase.


ensembl_gene_id: Noca_2677
symbol: Noca_2677
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: nfa:nfa43930 putative transcriptional regulator.


ensembl_gene_id: Noca_2682
symbol: Noca_2682
gene_biotype: protein_coding
description:
  PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rha:RHA1_ro03900 hypothetical protein.


ensembl_gene_id: Noca_2690
symbol: Noca_2690
gene_biotype: protein_coding
description:
  PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: rha:RHA1_ro06901 peptidylprolyl isomerase.


ensembl_gene_id: Noca_2697
symbol: Noca_2697
gene_biotype: protein_coding
description:
  Membrane alanyl aminopeptidase, Metallo peptidase, MEROPS family M01; TIGRFAM: aminopeptidase N; PFAM: peptidase M1, membrane alanine aminopeptidase; KEGG: fal:FRAAL1606 putative aminopeptidase.


ensembl_gene_id: Noca_2698
symbol: fdhD
gene_biotype: protein_coding
description:
  Formate dehydrogenase, subunit FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.


ensembl_gene_id: Noca_2701
symbol: sbcD
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: Noca_2705
symbol: Noca_2705
gene_biotype: protein_coding
description:
  PFAM: CHAD domain containing protein; adenylate cyclase; KEGG: fal:FRAAL2447 hypothetical protein; putative adenylate cyclase domain.


ensembl_gene_id: Noca_2709
symbol: gcvP
gene_biotype: protein_coding
description:
  Glycine dehydrogenase (decarboxylating) alpha subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.


ensembl_gene_id: Noca_2714
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: Noca_2718
symbol: Noca_2718
gene_biotype: protein_coding
description:
  PFAM: CDP-alcohol phosphatidyltransferase; KEGG: tfu:Tfu_1393 putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: Noca_2719
symbol: Noca_2719
gene_biotype: protein_coding
description:
  PFAM: CBS domain containing protein; protein of unknown function DUF21; KEGG: fra:Francci3_3000 protein of unknown function DUF21.


ensembl_gene_id: Noca_2720
symbol: Noca_2720
gene_biotype: protein_coding
description:
  PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: fal:FRAAL4939 hypothetical protein.


ensembl_gene_id: Noca_2731
symbol: Noca_2731
gene_biotype: protein_coding
description:
  PFAM: luciferase family protein; KEGG: rha:RHA1_ro04686 probable 5,10-methylenetetrahydromethanopterin reductase.


ensembl_gene_id: Noca_2736
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: Noca_2740
symbol: Noca_2740
gene_biotype: protein_coding
description:
  acetyl-CoA acetyltransferase; KEGG: rha:RHA1_ro04678 probable thiolase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Noca_2741
symbol: Noca_2741
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rha:RHA1_ro04654 3-oxoacyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Noca_2742
symbol: Noca_2742
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rha:RHA1_ro04653 short chain dehydrogenase.


ensembl_gene_id: Noca_2764
symbol: Noca_2764
gene_biotype: protein_coding
description:
  KEGG: rha:RHA1_ro04599 probable acetyl-CoA C-acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Noca_2765
symbol: Noca_2765
gene_biotype: protein_coding
description:
  Transcriptional regulator, TetR family; PFAM: regulatory protein, TetR; KEGG: rha:RHA1_ro04598 possible transcriptional regulator.


ensembl_gene_id: Noca_2770
symbol: Noca_2770
gene_biotype: protein_coding
description:
  PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_4696 acyl-CoA dehydrogenase-like protein.


ensembl_gene_id: Noca_2771
symbol: Noca_2771
gene_biotype: protein_coding
description:
  PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: nfa:nfa4790 putative acyl-CoA dehydrogenase.


ensembl_gene_id: Noca_2772
symbol: Noca_2772
gene_biotype: protein_coding
description:
  PFAM: Cupin 2, conserved barrel domain protein; KEGG: sus:Acid_7653 cupin 2, conserved barrel domain protein.


ensembl_gene_id: Noca_2774
symbol: Noca_2774
gene_biotype: protein_coding
description:
  PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rha:RHA1_ro04541 3,4-DHSA dioxygenase.


ensembl_gene_id: Noca_2776
symbol: Noca_2776
gene_biotype: protein_coding
description:
  PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rha:RHA1_ro04539 3-HSA hydroxylase, oxygenase.


ensembl_gene_id: Noca_2780
symbol: Noca_2780
gene_biotype: protein_coding
description:
  PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: rha:RHA1_ro04532 3-ketosteroid-delta-1-dehydrogenase.


ensembl_gene_id: Noca_2782
symbol: Noca_2782
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF480; Methyltransferase type 11; Methyltransferase type 12; KEGG: sus:Acid_1185 protein of unknown function DUF480; Belongs to the UPF0502 family.


ensembl_gene_id: Noca_2784
symbol: Noca_2784
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF344; KEGG: mbo:Mb3261c possible transcriptional regulatory protein PvdS (probable RNA polymerase sigma factor).


ensembl_gene_id: Noca_2790
symbol: Noca_2790
gene_biotype: protein_coding
description:
  PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rha:RHA1_ro04485 probable acyl-CoA dehydrogenase.


ensembl_gene_id: Noca_2792
symbol: Noca_2792
gene_biotype: protein_coding
description:
  Diacylglycerol O-acyltransferase; PFAM: protein of unknown function UPF0089; KEGG: rha:RHA1_ro06855 hypothetical protein; Belongs to the long-chain O-acyltransferase family.


ensembl_gene_id: Noca_2795
symbol: Noca_2795
gene_biotype: protein_coding
description:
  PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rha:RHA1_ro04483 possible acyl-CoA dehydrogenase.


ensembl_gene_id: Noca_2798
symbol: Noca_2798
gene_biotype: protein_coding
description:
  PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rha:RHA1_ro04657 possible methyltransferase.


ensembl_gene_id: Noca_2799
symbol: Noca_2799
gene_biotype: protein_coding
description:
  PFAM: glycosyl transferase, group 1; KEGG: rha:RHA1_ro04656 probable phosphatidylinositol alpha-mannosyltransferase.


ensembl_gene_id: Noca_2802
symbol: Noca_2802
gene_biotype: protein_coding
description:
  TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; KEGG: nfa:nfa48950 putative peptide chain release factor.


ensembl_gene_id: Noca_2803
symbol: Noca_2803
gene_biotype: protein_coding
description:
  Transcriptional regulator, ArsR family; PFAM: low molecular weight phosphotyrosine protein phosphatase; regulatory protein, ArsR; KEGG: mmc:Mmcs_4520 transcriptional regulator, ArsR family.


ensembl_gene_id: Noca_2804
symbol: Noca_2804
gene_biotype: protein_coding
description:
  PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMb21154 hypothetical protein, bleomycin resistance protein family.


ensembl_gene_id: Noca_2806
symbol: Noca_2806
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rha:RHA1_ro04958 bifunctional ABC multidrug transporter.


ensembl_gene_id: Noca_2810
symbol: Noca_2810
gene_biotype: protein_coding
description:
  PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: tbd:Tbd_1055 S-adenosylmethionine-dependent methyltransferase.


ensembl_gene_id: Noca_2812
symbol: Noca_2812
gene_biotype: protein_coding
description:
  PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: nfa:nfa42140 hypothetical protein.


ensembl_gene_id: Noca_2813
symbol: Noca_2813
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: bur:Bcep18194_B1012 short-chain dehydrogenase/reductase SDR.


ensembl_gene_id: Noca_2814
symbol: Noca_2814
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: nfa:nfa5340 putative short chain dehydrogenase.


ensembl_gene_id: Noca_2816
symbol: Noca_2816
gene_biotype: protein_coding
description:
  PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: fal:FRAAL1022 putative thioredoxin reductase.


ensembl_gene_id: Noca_2823
symbol: Noca_2823
gene_biotype: protein_coding
description:
  TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: rha:RHA1_ro01970 possible Mce family protein.


ensembl_gene_id: Noca_2826
symbol: Noca_2826
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF140; KEGG: sco:SCO2421 putative ABC-transporter integral membrane protein.


ensembl_gene_id: Noca_2829
symbol: Noca_2829
gene_biotype: protein_coding
description:
  PFAM: GAF domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: rha:RHA1_ro03573 anti-sigma factor, possible RsbU.


ensembl_gene_id: Noca_2832
symbol: Noca_2832
gene_biotype: protein_coding
description:
  Cellulose synthase (UDP-forming); PFAM: glycosyl transferase, family 2; KEGG: rha:RHA1_ro03574 probable cellulose synthase catalytic subunit.


ensembl_gene_id: Noca_2833
symbol: Noca_2833
gene_biotype: protein_coding
description:
  TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rha:RHA1_ro03575 anti-sigma factor antagonist, possible RsbV; Belongs to the anti-sigma-factor antagonist family.


ensembl_gene_id: Noca_2837
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: Noca_2838
symbol: Noca_2838
gene_biotype: protein_coding
description:
  PFAM: phospholipase D/Transphosphatidylase; KEGG: tfu:Tfu_2817 phospholipase D/Transphosphatidylase.


ensembl_gene_id: Noca_2840
symbol: Noca_2840
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: nfa:nfa26950 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Noca_2842
symbol: Noca_2842
gene_biotype: protein_coding
description:
  PFAM: 5'-3' exonuclease; SMART: Helix-hairpin-helix domain protein, class 2; KEGG: mmc:Mmcs_3011 DNA polymerase I.


ensembl_gene_id: Noca_2845
symbol: lig
gene_biotype: protein_coding
description:
  DNA ligase I, ATP-dependent Dnl1; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair.


ensembl_gene_id: Noca_2846
symbol: Noca_2846
gene_biotype: protein_coding
description:
  Transcriptional regulator, TetR family; PFAM: regulatory protein, TetR; KEGG: mma:MM2546 hypothetical protein.


ensembl_gene_id: Noca_2847
symbol: Noca_2847
gene_biotype: protein_coding
description:
  KEGG: aci:ACIAD1977 putative acyl-CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Noca_2848
symbol: Noca_2848
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: cjk:jk0822 dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).


ensembl_gene_id: Noca_2851
symbol: Noca_2851
gene_biotype: protein_coding
description:
  Palmitoyl-CoA hydrolase; PFAM: acyl-CoA thioesterase; KEGG: rha:RHA1_ro06887 acyl-CoA thioesterase II.


ensembl_gene_id: Noca_2853
symbol: Noca_2853
gene_biotype: protein_coding
description:
  KEGG: tfu:Tfu_1903 thiolase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Noca_2854
symbol: Noca_2854
gene_biotype: protein_coding
description:
  PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: tfu:Tfu_1904 fatty acid oxidation complex alpha-subunit.


ensembl_gene_id: Noca_2855
symbol: Noca_2855
gene_biotype: protein_coding
description:
  KEGG: ade:Adeh_3529 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.


ensembl_gene_id: Noca_2857
symbol: Noca_2857
gene_biotype: protein_coding
description:
  Amino acid/polyamine/organocation transporter, APC superfamily; PFAM: amino acid permease-associated region; KEGG: rxy:Rxyl_2013 amino acid permease-associated region; TC 2.A.3.


ensembl_gene_id: Noca_2859
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: Noca_2860
symbol: Noca_2860
gene_biotype: protein_coding
description:
  PFAM: Strictosidine synthase; SMP-30/Gluconolaconase/LRE domain protein; KEGG: mmc:Mmcs_1217 strictosidine synthase.


ensembl_gene_id: Noca_2863
symbol: Noca_2863
gene_biotype: protein_coding
description:
  PFAM: transcriptional regulator domain protein; transcriptional activator domain; KEGG: rha:RHA1_ro05028 probable transcriptional regulator.


ensembl_gene_id: Noca_2865
symbol: Noca_2865
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mbo:Mb2593 probable glutamine-transport ATP-binding protein ABC transporter GlnQ.


ensembl_gene_id: Noca_2866
symbol: Noca_2866
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO2674 ABC transporter ATP-binding protein.


ensembl_gene_id: Noca_2867
symbol: Noca_2867
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF214; KEGG: fal:FRAAL5378 putative ABC transport system integral membrane protein.


ensembl_gene_id: Noca_2869
symbol: Noca_2869
gene_biotype: protein_coding
description:
  PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: tfu:Tfu_0384 cold shock protein.


ensembl_gene_id: Noca_2870
symbol: Noca_2870
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function UPF0047; KEGG: fra:Francci3_3056 protein of unknown function UPF0047.


ensembl_gene_id: Noca_2873
symbol: Noca_2873
gene_biotype: protein_coding
description:
  PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: sma:SAV6340 RNA polymerase ECF-subfamily sigma factor.


ensembl_gene_id: Noca_2878
symbol: Noca_2878
gene_biotype: protein_coding
description:
  KEGG: tfu:Tfu_0319 cobaltochelatase, CobN subunit; TIGRFAM: cobaltochelatase, CobN subunit; PFAM: CobN/magnesium chelatase.


ensembl_gene_id: Noca_2879
symbol: Noca_2879
gene_biotype: protein_coding
description:
  KEGG: tfu:Tfu_0320 putative CobF protein, precorrin-6A synthase; TIGRFAM: precorrin-6A synthase (deacetylating); PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase.


ensembl_gene_id: Noca_2881
symbol: Noca_2881
gene_biotype: protein_coding
description:
  KEGG: tfu:Tfu_0310 precorrin-6x reductase CbiJ/CobK; TIGRFAM: precorrin-6x reductase; PFAM: Precorrin-6x reductase CbiJ/CobK.


ensembl_gene_id: Noca_2885
symbol: cobD
gene_biotype: protein_coding
description:
  Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: Noca_2887
symbol: cobB-2
gene_biotype: protein_coding
description:
  Hydrogenobyrinate a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: Noca_2888
symbol: Noca_2888
gene_biotype: protein_coding
description:
  cob(I)yrinic acid a,c-diamide adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; KEGG: nfa:nfa40820 putative cob(I)alamin adenolsyltransferase.


ensembl_gene_id: Noca_2889
symbol: Noca_2889
gene_biotype: protein_coding
description:
  Protoporphyrin IX magnesium-chelatase; KEGG: tfu:Tfu_0313 Mg-chelatase subunit ChlI; PFAM: magnesium chelatase, ChlI subunit; von Willebrand factor, type A; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase.


ensembl_gene_id: Noca_2890
symbol: Noca_2890
gene_biotype: protein_coding
description:
  precorrin-6Y C5,15-methyltransferase (decarboxylating); KEGG: tfu:Tfu_0314 SAM (and some other nucleotide) binding motif; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase.


ensembl_gene_id: Noca_2891
symbol: Noca_2891
gene_biotype: protein_coding
description:
  TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: nfa:nfa50340 putative methyltransferase; Belongs to the precorrin methyltransferase family.


ensembl_gene_id: Noca_2892
symbol: Noca_2892
gene_biotype: protein_coding
description:
  TIGRFAM: precorrin-3B C17-methyltransferase; precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: tfu:Tfu_0316 precorrin-3B C17-methyltransferase region:precorrin-2 C20-methyltransferase.


ensembl_gene_id: Noca_2894
symbol: Noca_2894
gene_biotype: protein_coding
description:
  PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; KEGG: tfu:Tfu_0318 cobalamin biosynthesis protein CobG, precorrin-3B synthase.


ensembl_gene_id: Noca_2895
symbol: Noca_2895
gene_biotype: protein_coding
description:
  GAF sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rba:RB12326 sensory histidine protein kinase.


ensembl_gene_id: Noca_2901
symbol: Noca_2901
gene_biotype: protein_coding
description:
  23S rRNA m(5)U-1939 methyltransferase; PFAM: deoxyribonuclease/rho motif-related TRAM; KEGG: sma:SAV2389 putative RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: Noca_2902
symbol: Noca_2902
gene_biotype: protein_coding
description:
  Amino acid/polyamine/organocation transporter, APC superfamily; KEGG: nfa:nfa37450 putative transporter; TC 2.A.3.


ensembl_gene_id: Noca_2904
symbol: Noca_2904
gene_biotype: protein_coding
description:
  PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: pac:PPA1057 Trk system potassium uptake protein.


ensembl_gene_id: Noca_2908
symbol: dut
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: Noca_2913
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: Noca_2917
symbol: Noca_2917
gene_biotype: protein_coding
description:
  Male sterility C-terminal domain; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; KR; KEGG: hch:HCH_04995 short-chain alcohol dehydrogenase-like protein.


ensembl_gene_id: Noca_2918
symbol: Noca_2918
gene_biotype: protein_coding
description:
  Thiosulfate sulfurtransferase; PFAM: Rhodanese domain protein; KEGG: nfa:nfa10240 putative thiosulfate sulfurtransferase.


ensembl_gene_id: Noca_2922
symbol: Noca_2922
gene_biotype: protein_coding
description:
  Copper-translocating P-type ATPase; KEGG: atc:AGR_C_1708 copper-transporting ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein.


ensembl_gene_id: Noca_2927
symbol: Noca_2927
gene_biotype: protein_coding
description:
  Transcriptional regulator, ArsR family; PFAM: regulatory protein, ArsR; KEGG: rha:RHA1_ro11232 probable transcriptional regulator, ArsR family.


ensembl_gene_id: Noca_2930
symbol: Noca_2930
gene_biotype: protein_coding
description:
  PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein; KEGG: rha:RHA1_ro11229 possible hydroxyacylglutathione hydrolase.


ensembl_gene_id: Noca_2932
symbol: Noca_2932
gene_biotype: protein_coding
description:
  PFAM: SirA family protein; KEGG: rha:RHA1_ro11227 hypothetical protein; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: Noca_2933
symbol: Noca_2933
gene_biotype: protein_coding
description:
  PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Polysulphide reductase, NrfD; KEGG: rha:RHA1_ro11226 probable polysulphide reductase.


ensembl_gene_id: Noca_2934
symbol: Noca_2934
gene_biotype: protein_coding
description:
  Formate dehydrogenase; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: rha:RHA1_ro11225 hypothetical protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: Noca_2936
symbol: Noca_2936
gene_biotype: protein_coding
description:
  PFAM: Sulfate transporter/antisigma-factor antagonist STAS; sulphate transporter; KEGG: aeh:Mlg_1668 sulfate transporter.


ensembl_gene_id: Noca_2937
symbol: Noca_2937
gene_biotype: protein_coding
description:
  PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein; KEGG: rha:RHA1_ro11243 hypothetical protein.


ensembl_gene_id: Noca_2938
symbol: Noca_2938
gene_biotype: protein_coding
description:
  PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cef:CE0279 putative sensor kinase.


ensembl_gene_id: Noca_2939
symbol: Noca_2939
gene_biotype: protein_coding
description:
  PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sth:STH750 two-component response regulator, probably involved in phosphate sensing.


ensembl_gene_id: Noca_2942
symbol: Noca_2942
gene_biotype: protein_coding
description:
  PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; PAS fold domain protein; KEGG: dge:Dgeo_0556 multi-sensor signal transduction histidine kinase.


ensembl_gene_id: Noca_2943
symbol: Noca_2943
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: dra:DR0987 DNA-binding response regulator.


ensembl_gene_id: Noca_2944
symbol: Noca_2944
gene_biotype: protein_coding
description:
  PFAM: Cytochrome b/b6, N-terminal domain; KEGG: oih:OB1775 menaquinol-cytochrome-c reductase cytochrome b subunit.


ensembl_gene_id: Noca_2948
symbol: Noca_2948
gene_biotype: protein_coding
description:
  CoA-binding domain protein; PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: tfu:Tfu_2128 hypothetical protein.


ensembl_gene_id: Noca_2949
symbol: Noca_2949
gene_biotype: protein_coding
description:
  PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal repeat, beta-propeller; KEGG: sma:SAV2423 putative a subunit of topoisomerase IV.


ensembl_gene_id: Noca_2951
symbol: Noca_2951
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro08665 probable multidrug resistance transporter, MFS superfamily.


ensembl_gene_id: Noca_2953
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: Noca_2954
symbol: Noca_2954
gene_biotype: protein_coding
description:
  Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.


ensembl_gene_id: Noca_2955
symbol: crcB
gene_biotype: protein_coding
description:
  Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: Noca_2958
symbol: Noca_2958
gene_biotype: protein_coding
description:
  KEGG: sma:SAV2442 putative a subunit of topoisomerase IV; PFAM: DNA gyrase, subunit B domain protein; ATP-binding region, ATPase domain protein domain protein; DNA topoisomerase, type IIA, subunit B, region 2 domain protein; SMART: DNA topoisomerase II.


ensembl_gene_id: Noca_2963
symbol: sigA
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: Noca_2966
symbol: Noca_2966
gene_biotype: protein_coding
description:
  TIGRFAM: glycosyltransferase, MGT family; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl transferase, family 28; Glycosyltransferase 28, C-terminal domain; KEGG: mmc:Mmcs_1269 glycosyltransferase, MGT family.


ensembl_gene_id: Noca_2970
symbol: Noca_2970
gene_biotype: protein_coding
description:
  Uncharacterized enzyme; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.


ensembl_gene_id: Noca_2972
symbol: Noca_2972
gene_biotype: protein_coding
description:
  PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: fra:Francci3_3532 phage integrase.


ensembl_gene_id: Noca_2975
symbol: dinB
gene_biotype: protein_coding
description:
  DNA-directed DNA polymerase; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: Noca_2976
symbol: Noca_2976
gene_biotype: protein_coding
description:
  TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: sma:SAV6937 antagonist of KipI.


ensembl_gene_id: Noca_2978
symbol: Noca_2978
gene_biotype: protein_coding
description:
  LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.


ensembl_gene_id: Noca_2979
symbol: Noca_2979
gene_biotype: protein_coding
description:
  Oligopeptidase B, Serine peptidase, MEROPS family S09A; PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9A, prolyl oligopeptidase domain protein beta-propeller; KEGG: nfa:nfa5630 putative protease.


ensembl_gene_id: Noca_2980
symbol: Noca_2980
gene_biotype: protein_coding
description:
  Sigma-70 region 3 domain protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: Noca_2981
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: Noca_2987
symbol: Noca_2987
gene_biotype: protein_coding
description:
  PFAM: AMP-dependent synthetase and ligase; KEGG: fal:FRAAL1640 putative acyl-CoA synthetase, long-chain fatty acid:CoA ligase.


ensembl_gene_id: Noca_2988
symbol: Noca_2988
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family with amidase-like domain; PFAM: helix-turn-helix- domain containing protein, AraC type; ThiJ/PfpI domain protein; KEGG: sma:SAV3030 AraC-family transcriptional regulator.


ensembl_gene_id: Noca_2990
symbol: Noca_2990
gene_biotype: protein_coding
description:
  PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: tfu:Tfu_0150 hypothetical protein.


ensembl_gene_id: Noca_2992
symbol: Noca_2992
gene_biotype: protein_coding
description:
  PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sus:Acid_4357 methyltransferase type 11.


ensembl_gene_id: Noca_2993
symbol: Noca_2993
gene_biotype: protein_coding
description:
  PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: aba:Acid345_3613 NAD-dependent epimerase/dehydratase.


ensembl_gene_id: Noca_2995
symbol: Noca_2995
gene_biotype: protein_coding
description:
  PFAM: UDP-glucose/GDP-mannose dehydrogenase; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: pfu:PF1631 NDP-sugar dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: Noca_2999
symbol: Noca_2999
gene_biotype: protein_coding
description:
  PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: tfu:Tfu_2465 hypothetical protein.


ensembl_gene_id: Noca_3005
symbol: Noca_3005
gene_biotype: protein_coding
description:
  PFAM: luciferase family protein; KEGG: mlo:mll2315 alkanal monooxygenase (bacterial liciferase alpha chain) like protein.


ensembl_gene_id: Noca_3006
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: Noca_3007
symbol: Noca_3007
gene_biotype: protein_coding
description:
  TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: sma:SAV6225 hypothetical protein.


ensembl_gene_id: Noca_3010
symbol: Noca_3010
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: extracellular solute-binding protein, family 3; SMART: ionotropic glutamate receptor; KEGG: sma:SAV6400 putative ABC transporter substrate-binding protein; TC 3.A.1.3.-.


ensembl_gene_id: Noca_3011
symbol: Noca_3011
gene_biotype: protein_coding
description:
  TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV6401 putative ABC transporter permease protein; TC 3.A.1.3.-.


ensembl_gene_id: Noca_3012
symbol: Noca_3012
gene_biotype: protein_coding
description:
  Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV6402 putative ABC transporter ATP-binding protein; TC 3.A.1.3.-.


ensembl_gene_id: Noca_3013
symbol: Noca_3013
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; KEGG: tfu:Tfu_1182 branched-chain amino acid ABC-type transport system permease components; TC 3.A.1.4.-.


ensembl_gene_id: Noca_3014
symbol: Noca_3014
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: inner-membrane translocator; KEGG: tfu:Tfu_1183 branched-chain amino acid transport system permease protein; TC 3.A.1.4.-.


ensembl_gene_id: Noca_3015
symbol: Noca_3015
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rha:RHA1_ro00993 ABC branched-chain amino acid transporter, ATP-binding component; TC 3.A.1.4.-.


ensembl_gene_id: Noca_3016
symbol: Noca_3016
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rha:RHA1_ro00994 ABC branched-chain amino acid transport, ATP-binding component; TC 3.A.1.4.-.


ensembl_gene_id: Noca_3017
symbol: Noca_3017
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: rha:RHA1_ro00995 probable branched-chain amino acid ABC transporter binding protein; TC 3.A.1.4.-.


ensembl_gene_id: Noca_3018
symbol: Noca_3018
gene_biotype: protein_coding
description:
  PFAM: response regulator receiver; ANTAR domain protein; KEGG: tfu:Tfu_1181 response regulator receiver.


ensembl_gene_id: Noca_3020
symbol: Noca_3020
gene_biotype: protein_coding
description:
  PFAM: pyruvate kinase; KEGG: sma:SAV6217 putative pyruvate kinase; Belongs to the pyruvate kinase family.


ensembl_gene_id: Noca_3021
symbol: Noca_3021
gene_biotype: protein_coding
description:
  TIGRFAM: glutamate synthases, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sma:SAV6190 putative glutamate synthase small chain.


ensembl_gene_id: Noca_3022
symbol: Noca_3022
gene_biotype: protein_coding
description:
  PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: sco:SCO2026 putative glutamate synthase large subunit.


ensembl_gene_id: Noca_3023
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: Noca_3024
symbol: Noca_3024
gene_biotype: protein_coding
description:
  PFAM: electron transport protein SCO1/SenC; KEGG: fra:Francci3_2499 electron transport protein SCO1/SenC.


ensembl_gene_id: Noca_3025
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: Noca_3026
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: Noca_3027
symbol: trpC
gene_biotype: protein_coding
description:
  PFAM: Indole-3-glycerol phosphate synthase; KEGG: tfu:Tfu_1164 indole-3-glycerol-phosphate synthase; Belongs to the TrpC family.


ensembl_gene_id: Noca_3032
symbol: hisI
gene_biotype: protein_coding
description:
  phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.


ensembl_gene_id: Noca_3033
symbol: Noca_3033
gene_biotype: protein_coding
description:
  PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: tfu:Tfu_1158 ABC-type multidrug transport system ATPase and permease components.


ensembl_gene_id: Noca_3034
symbol: Noca_3034
gene_biotype: protein_coding
description:
  PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: tfu:Tfu_1157 ABC-type multidrug transport system ATPase and permease components.


ensembl_gene_id: Noca_3036
symbol: Noca_3036
gene_biotype: protein_coding
description:
  PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dsy:DSY4468 hypothetical protein.


ensembl_gene_id: Noca_3039
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit hisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: Noca_3040
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; KEGG: tfu:Tfu_1155 bifunctional HisA/TrpF; TIGRFAM: bifunctional HisA/TrpF protein; PFAM: histidine biosynthesis.


ensembl_gene_id: Noca_3042
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit hisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: Noca_3043
symbol: hisB
gene_biotype: protein_coding
description:
  PFAM: imidazoleglycerol-phosphate dehydratase; KEGG: blo:BL1297 imidazoleglycerol-phosphate dehydratase.


ensembl_gene_id: Noca_3044
symbol: hisC
gene_biotype: protein_coding
description:
  TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase, class I and II; KEGG: tfu:Tfu_1151 histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: Noca_3045
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: Noca_3047
symbol: Noca_3047
gene_biotype: protein_coding
description:
  TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: sma:SAV6149 transcriptional regulator.


ensembl_gene_id: Noca_3050
symbol: Noca_3050
gene_biotype: protein_coding
description:
  KEGG: lxx:Lxx15160 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP C-terminal domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type; SMART: phosphoesterase PHP domain protein.


ensembl_gene_id: Noca_3052
symbol: Noca_3052
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: Noca_3053
symbol: lspA-2
gene_biotype: protein_coding
description:
  Peptidase A8, signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: Noca_3057
symbol: sepF
gene_biotype: protein_coding
description:
  Protein of unknown function DUF552; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.


ensembl_gene_id: Noca_3058
symbol: Noca_3058
gene_biotype: protein_coding
description:
  Alanine racemase domain protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: Noca_3060
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: Noca_3061
symbol: ftsQ
gene_biotype: protein_coding
description:
  Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.


ensembl_gene_id: Noca_3063
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: Noca_3064
symbol: Noca_3064
gene_biotype: protein_coding
description:
  Cell division-specific peptidoglycan biosynthesis regulator FtsW; TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: sma:SAV6121 putative cell division protein FtsW; Belongs to the SEDS family.


ensembl_gene_id: Noca_3065
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: Noca_3066
symbol: mraY
gene_biotype: protein_coding
description:
  Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: Noca_3067
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: Noca_3068
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: Noca_3069
symbol: Noca_3069
gene_biotype: protein_coding
description:
  Peptidoglycan synthetase FtsI; PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: sco:SCO2090 cell division protein.


ensembl_gene_id: Noca_3071
symbol: rsmH
gene_biotype: protein_coding
description:
  S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: Noca_3072
symbol: mraZ
gene_biotype: protein_coding
description:
  TIGRFAM: MraZ protein; PFAM: protein of unknown function UPF0040; KEGG: pac:PPA0749 MraZ protein; Belongs to the MraZ family.


ensembl_gene_id: Noca_3073
symbol: Noca_3073
gene_biotype: protein_coding
description:
  PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: sma:SAV6112 putative regulatory protein.


ensembl_gene_id: Noca_3081
symbol: Noca_3081
gene_biotype: protein_coding
description:
  PFAM: arsenate reductase and related; KEGG: mxa:MXAN_3126 putative arsenate reductase; Belongs to the ArsC family.


ensembl_gene_id: Noca_3082
symbol: Noca_3082
gene_biotype: protein_coding
description:
  UDP-galactopyranose mutase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: sma:SAV6102 phytoene dehydrogenase.


ensembl_gene_id: Noca_3083
symbol: Noca_3083
gene_biotype: protein_coding
description:
  TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; KEGG: fal:FRAAL2163 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: Noca_3084
symbol: Noca_3084
gene_biotype: protein_coding
description:
  PFAM: Polyprenyl synthetase; KEGG: tfu:Tfu_1051 putative polyprenyl synthase / dimethylallyltranstransferase; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: Noca_3086
symbol: Noca_3086
gene_biotype: protein_coding
description:
  PFAM: protein kinase; PASTA domain containing protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: sco:SCO2110 putative eukaryotic-type serine/threonine protein kinase.


ensembl_gene_id: Noca_3090
symbol: nfo
gene_biotype: protein_coding
description:
  Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.


ensembl_gene_id: Noca_3091
symbol: Noca_3091
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF6, transmembrane; KEGG: pac:PPA0728 membrane spanning protein DUF6.


ensembl_gene_id: Noca_3092
symbol: Noca_3092
gene_biotype: protein_coding
description:
  3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; KEGG: tfu:Tfu_1039 phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2.


ensembl_gene_id: Noca_3094
symbol: Noca_3094
gene_biotype: protein_coding
description:
  L-threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase, class I and II; KEGG: sth:STH2403 threonine aldolase.


ensembl_gene_id: Noca_3096
symbol: Noca_3096
gene_biotype: protein_coding
description:
  3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; KEGG: sma:SAV6086 putative 2-dehydro-3-deoxyphosphoheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase, class II; Belongs to the class-II DAHP synthase family.


ensembl_gene_id: Noca_3097
symbol: Noca_3097
gene_biotype: protein_coding
description:
  Amino acid/polyamine/organocation transporter, APC superfamily; PFAM: amino acid permease-associated region; KEGG: mmc:Mmcs_4568 amino acid permease-associated region; TC 2.A.3.


ensembl_gene_id: Noca_3098
symbol: pfp
gene_biotype: protein_coding
description:
  Pyrophosphate-dependent phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.


ensembl_gene_id: Noca_3101
symbol: Noca_3101
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.


ensembl_gene_id: Noca_3103
symbol: Noca_3103
gene_biotype: protein_coding
description:
  PFAM: flavin reductase domain protein, FMN-binding; KEGG: rpb:RPB_1003 flavin reductase-like, FMN-binding.


ensembl_gene_id: Noca_3104
symbol: Noca_3104
gene_biotype: protein_coding
description:
  PFAM: phospholipid/glycerol acyltransferase; KEGG: fra:Francci3_3088 phospholipid/glycerol acyltransferase.


ensembl_gene_id: Noca_3107
symbol: Noca_3107
gene_biotype: protein_coding
description:
  PFAM: LOR/SDH bifunctional enzyme conserved domain protein; KEGG: fal:FRAAL5090 hypothetical protein.


ensembl_gene_id: Noca_3109
symbol: Noca_3109
gene_biotype: protein_coding
description:
  Glucokinase; TIGRFAM: putative glucokinase, ROK family; PFAM: ROK family protein; KEGG: fal:FRAAL5091 putative glucokinase (glucose kinase).


ensembl_gene_id: Noca_3111
symbol: Noca_3111
gene_biotype: protein_coding
description:
  Arsenite efflux ATP-binding protein ArsA; PFAM: Anion-transporting ATPase; KEGG: rxy:Rxyl_1314 arsenite-activated ATPase (ArsA); TC 3.A.4.1.1.


ensembl_gene_id: Noca_3113
symbol: Noca_3113
gene_biotype: protein_coding
description:
  PFAM: AMP-dependent synthetase and ligase; KEGG: sma:SAV6069 putative acyl-CoA synthetase, long-chain-fatty-acid:CoA ligase.


ensembl_gene_id: Noca_3118
symbol: Noca_3118
gene_biotype: protein_coding
description:
  PFAM: type II secretion system protein; KEGG: mxa:MXAN_4650 type II secretion system protein F domain protein.


ensembl_gene_id: Noca_3119
symbol: Noca_3119
gene_biotype: protein_coding
description:
  PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: rxy:Rxyl_2612 GAF sensor signal transduction histidine kinase.


ensembl_gene_id: Noca_3120
symbol: Noca_3120
gene_biotype: protein_coding
description:
  PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: rha:RHA1_ro00150 response regulator, two-component system.


ensembl_gene_id: Noca_3128
symbol: Noca_3128
gene_biotype: protein_coding
description:
  DNA polymerase III, epsilon subunit; KEGG: fal:FRAAL5108 putative DNA-directed DNA polymerase; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Excinuclease ABC, C subunit domain protein; UvrB/UvrC protein; Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease.


ensembl_gene_id: Noca_3131
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: Noca_3135
symbol: Noca_3135
gene_biotype: protein_coding
description:
  Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor; PFAM: cytochrome c, class I; KEGG: sco:SCO2150 cytochrome C heme-binding subunit.


ensembl_gene_id: Noca_3136
symbol: Noca_3136
gene_biotype: protein_coding
description:
  PFAM: Rieske [2Fe-2S] domain protein; KEGG: pac:PPA0711 ubiquinol-cytochrome c reductase iron-sulfur subunit.


ensembl_gene_id: Noca_3139
symbol: Noca_3139
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.


ensembl_gene_id: Noca_3140
symbol: Noca_3140
gene_biotype: protein_coding
description:
  Cytochrome-c oxidase; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.


ensembl_gene_id: Noca_3141
symbol: Noca_3141
gene_biotype: protein_coding
description:
  Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).


ensembl_gene_id: Noca_3143
symbol: Noca_3143
gene_biotype: protein_coding
description:
  PFAM: SirA family protein; KEGG: sma:SAV6046 aminotransferase; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: Noca_3146
symbol: Noca_3146
gene_biotype: protein_coding
description:
  TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: sma:SAV6042 hypothetical protein; Belongs to the HesB/IscA family.


ensembl_gene_id: Noca_3147
symbol: Noca_3147
gene_biotype: protein_coding
description:
  PFAM: glycerate kinase; KEGG: tfu:Tfu_1010 glycerate kinase; Belongs to the glycerate kinase type-1 family.


ensembl_gene_id: Noca_3149
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: Noca_3151
symbol: htpX
gene_biotype: protein_coding
description:
  Heat shock protein, Metallo peptidase, MEROPS family M48B; PFAM: peptidase M48, Ste24p; KEGG: fra:Francci3_2230 peptidase M48, Ste24p; Belongs to the peptidase M48B family.


ensembl_gene_id: Noca_3155
symbol: Noca_3155
gene_biotype: protein_coding
description:
  TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: sco:SCO7475 putative phenylacetic acid degradation NADH oxidoreductase PaaE.


ensembl_gene_id: Noca_3156
symbol: Noca_3156
gene_biotype: protein_coding
description:
  TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; KEGG: sco:SCO7474 putative phenylacetic acid degradation protein PaaD.


ensembl_gene_id: Noca_3157
symbol: Noca_3157
gene_biotype: protein_coding
description:
  TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: rpc:RPC_0689 phenylacetate-CoA oxygenase, PaaI subunit.


ensembl_gene_id: Noca_3158
symbol: Noca_3158
gene_biotype: protein_coding
description:
  TIGRFAM: phenylacetate-CoA oxygenase, PaaH subunit; PFAM: phenylacetic acid degradation B; KEGG: sma:SAV4353 putative phenylacetic acid degradation protein.


ensembl_gene_id: Noca_3159
symbol: Noca_3159
gene_biotype: protein_coding
description:
  TIGRFAM: phenylacetate-CoA oxygenase, PaaG subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: sma:SAV4354 putative phenylacetic acid degradation protein.


ensembl_gene_id: Noca_3164
symbol: Noca_3164
gene_biotype: protein_coding
description:
  Mannitol PTS system EIICBA or EIICB component; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; phosphotransferase system, EIIC; phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: ppr:PBPRB0363 putative mannitol-specific IIABC component, PTS system; TC 4.A.2.1.2; TC 4.A.2.1.2; TC 4.A.2.1.2.


ensembl_gene_id: Noca_3165
symbol: Noca_3165
gene_biotype: protein_coding
description:
  PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pac:PPA0918 putative zinc-binding sorbitol dehydrogenase.


ensembl_gene_id: Noca_3167
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: Noca_3172
symbol: Noca_3172
gene_biotype: protein_coding
description:
  PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: nfa:nfa22150 putative sigma factor.


ensembl_gene_id: Noca_3176
symbol: Noca_3176
gene_biotype: protein_coding
description:
  PFAM: peptidase M16 domain protein; KEGG: fal:FRAAL5752 putative zinc protease; Belongs to the peptidase M16 family.


ensembl_gene_id: Noca_3177
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: Noca_3178
symbol: rpsO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.


ensembl_gene_id: Noca_3181
symbol: Noca_3181
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate--protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: Noca_3182
symbol: Noca_3182
gene_biotype: protein_coding
description:
  Transcriptional regulator, DeoR family; PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: nfa:nfa28560 putative transcriptional regulator.


ensembl_gene_id: Noca_3183
symbol: Noca_3183
gene_biotype: protein_coding
description:
  PFAM: PfkB domain protein; KEGG: nfa:nfa28550 putative fructose-1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: Noca_3184
symbol: Noca_3184
gene_biotype: protein_coding
description:
  Fructose PTS system EIIBC or EIIC component; TIGRFAM: PTS system, fructose-specific, IIB subunnit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose subfamily, IIC subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; phosphotransferase system, EIIC; phosphotransferase system PTS, fructose-specific IIB subunit; KEGG: mmc:Mmcs_0080 phosphotransferase system, fructose IIC component; TC 4.A.2.1.4; TC 4.A.2.1.4; TC 4.A.2.1.4.


ensembl_gene_id: Noca_3185
symbol: Noca_3185
gene_biotype: protein_coding
description:
  TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: mmc:Mmcs_0079 phosphotransferase system, HPr.


ensembl_gene_id: Noca_3187
symbol: Noca_3187
gene_biotype: protein_coding
description:
  Riboflavin kinase / FMN adenylyltransferase; TIGRFAM: riboflavin biosynthesis protein RibF; cytidyltransferase-related domain; PFAM: Riboflavin kinase / FAD synthetase; cytidylyltransferase; KEGG: lxx:Lxx07280 riboflavin kinase/ FMN adenyltransferase; Belongs to the ribF family.


ensembl_gene_id: Noca_3188
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: Noca_3189
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: Noca_3190
symbol: infB
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: Noca_3192
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription termination factor NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: Noca_3193
symbol: rimP
gene_biotype: protein_coding
description:
  Protein of unknown function DUF150; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: Noca_3196
symbol: Noca_3196
gene_biotype: protein_coding
description:
  TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: fra:Francci3_1747 HAD-superfamily hydrolase, subfamily IA, variant 1.


ensembl_gene_id: Noca_3197
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]


ensembl_gene_id: Noca_3202
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: Noca_3203
symbol: Noca_3203
gene_biotype: protein_coding
description:
  PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; KEGG: sma:SAV2562 putative metalloprotease.


ensembl_gene_id: Noca_3204
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


