# pathwayInfo

id: PF04966
description: Carbohydrate-selective porin, OprB family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04966
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF04966_Carbohydrate-selective_porin,_OprB_family


id: PF04984
description: Phage tail sheath protein subtilisin-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04984
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF04984_Phage_tail_sheath_protein_subtilisin-like_domain


id: PF05016
description: ParE toxin of type II toxin-antitoxin system, parDE
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05016
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF05016_ParE_toxin_of_type_II_toxin-antitoxin_system,_parDE


id: PF05134
description: Type II secretion system (T2SS), protein L
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05134
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF05134_Type_II_secretion_system_(T2SS),_protein_L


id: PF05135
description: Phage gp6-like head-tail connector protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05135
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF05135_Phage_gp6-like_head-tail_connector_protein


id: PF05157
description: Type II secretion system (T2SS), protein E, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05157
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF05157_Type_II_secretion_system_(T2SS),_protein_E,_N-terminal_domain


id: PF05173
description: Dihydrodipicolinate reductase, C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05173
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF05173_Dihydrodipicolinate_reductase,_C-terminus


id: PF05187
description: Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05187
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF05187_Electron_transfer_flavoprotein-ubiquinone_oxidoreductase,_4Fe-4S


id: PF05198
description: Translation initiation factor IF-3, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05198
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF05198_Translation_initiation_factor_IF-3,_N-terminal_domain


id: PF05201
description: Glutamyl-tRNAGlu reductase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05201
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF05201_Glutamyl-tRNAGlu_reductase,_N-terminal_domain


id: PF05275
description: Copper resistance protein B precursor (CopB)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05275
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF05275_Copper_resistance_protein_B_precursor_(CopB)


id: PF05362
description: Lon protease (S16) C-terminal proteolytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05362
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF05362_Lon_protease_(S16)_C-terminal_proteolytic_domain


id: PF05430
description: S-adenosyl-L-methionine-dependent methyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05430
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF05430_S-adenosyl-L-methionine-dependent_methyltransferase


id: PF05437
description: Branched-chain amino acid transport protein (AzlD)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05437
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF05437_Branched-chain_amino_acid_transport_protein_(AzlD)


id: PF05525
description: Branched-chain amino acid transport protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05525
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF05525_Branched-chain_amino_acid_transport_protein


id: PF05591
description: Type VI secretion system, VipA, VC_A0107 or Hcp2
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05591
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF05591_Type_VI_secretion_system,_VipA,_VC_A0107_or_Hcp2


id: PF05597
description: Poly(hydroxyalcanoate) granule associated protein (phasin)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05597
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF05597_Poly(hydroxyalcanoate)_granule_associated_protein_(phasin)


id: PF05698
description: Bacterial trigger factor protein (TF) C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05698
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF05698_Bacterial_trigger_factor_protein_(TF)_C-terminus


id: PF05728
description: Uncharacterised protein family (UPF0227)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05728
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF05728_Uncharacterised_protein_family_(UPF0227)


id: PF05787
description: Bacterial protein of unknown function (DUF839)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05787
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF05787_Bacterial_protein_of_unknown_function_(DUF839)


id: PF05929
description: Phage capsid scaffolding protein (GPO) serine peptidase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05929
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF05929_Phage_capsid_scaffolding_protein_(GPO)_serine_peptidase


id: PF05930
description: Prophage CP4-57 regulatory protein (AlpA)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05930
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF05930_Prophage_CP4-57_regulatory_protein_(AlpA)


id: PF05936
description: Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05936
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF05936_Bacterial_Type_VI_secretion,_VC_A0110,_EvfL,_ImpJ,_VasE_


id: PF05943
description: EvpB/VC_A0108, tail sheath N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05943
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF05943_EvpB/VC_A0108,_tail_sheath_N-terminal_domain


id: PF05985
description: Ethanolamine ammonia-lyase light chain (EutC)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05985
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF05985_Ethanolamine_ammonia-lyase_light_chain_(EutC)


id: PF06026
description: Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06026
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF06026_Ribose_5-phosphate_isomerase_A_(phosphoriboisomerase_A)


id: PF06041
description: Bacterial protein of unknown function (DUF924)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06041
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF06041_Bacterial_protein_of_unknown_function_(DUF924)


id: PF06056
description: Putative ATPase subunit of terminase (gpP-like)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06056
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF06056_Putative_ATPase_subunit_of_terminase_(gpP-like)


id: PF06073
description: Bacterial protein of unknown function (DUF934)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06073
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF06073_Bacterial_protein_of_unknown_function_(DUF934)


id: PF06094
description: Gamma-glutamyl cyclotransferase, AIG2-like
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06094
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF06094_Gamma-glutamyl_cyclotransferase,_AIG2-like


id: PF06097
description: Bacterial protein of unknown function (DUF945)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06097
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF06097_Bacterial_protein_of_unknown_function_(DUF945)


id: PF06305
description: Lipopolysaccharide assembly protein A domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06305
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF06305_Lipopolysaccharide_assembly_protein_A_domain


id: PF06325
description: Ribosomal protein L11 methyltransferase (PrmA)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06325
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF06325_Ribosomal_protein_L11_methyltransferase_(PrmA)


id: PF06415
description: BPG-independent PGAM N-terminus (iPGM_N)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06415
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF06415_BPG-independent_PGAM_N-terminus_(iPGM_N)


id: PF06744
description: Type VI secretion protein IcmF C2-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06744
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF06744_Type_VI_secretion_protein_IcmF_C2-like_domain


id: PF06750
description: Bacterial Peptidase A24 N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06750
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF06750_Bacterial_Peptidase_A24_N-terminal_domain


id: PF06751
description: Ethanolamine ammonia lyase large subunit (EutB)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06751
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF06751_Ethanolamine_ammonia_lyase_large_subunit_(EutB)


id: PF06761
description: Intracellular multiplication and human macrophage-killing
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06761
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF06761_Intracellular_multiplication_and_human_macrophage-killing


id: PF06805
description: Bacteriophage lambda tail assembly protein I
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06805
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF06805_Bacteriophage_lambda_tail_assembly_protein_I


id: PF06808
description: Tripartite ATP-independent periplasmic transporter, DctM component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06808
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF06808_Tripartite_ATP-independent_periplasmic_transporter,_DctM_component


id: PF06812
description: ImpA, N-terminal, type VI secretion system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06812
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF06812_ImpA,_N-terminal,_type_VI_secretion_system


id: PF06833
description: Malonate decarboxylase gamma subunit (MdcE)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06833
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF06833_Malonate_decarboxylase_gamma_subunit_(MdcE)


id: PF06835
description: Lipopolysaccharide-assembly, LptC-related
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06835
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF06835_Lipopolysaccharide-assembly,_LptC-related


id: PF06857
description: Malonate decarboxylase delta subunit (MdcD)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06857
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF06857_Malonate_decarboxylase_delta_subunit_(MdcD)


id: PF06891
description: P2 phage tail completion protein R (GpR)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06891
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF06891_P2_phage_tail_completion_protein_R_(GpR)


id: PF06983
description: 3-demethylubiquinone-9 3-methyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06983
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF06983_3-demethylubiquinone-9_3-methyltransferase


id: PF07479
description: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07479
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF07479_NAD-dependent_glycerol-3-phosphate_dehydrogenase_C-terminus


id: PF07664
description: Ferrous iron transport protein B C terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07664
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF07664_Ferrous_iron_transport_protein_B_C_terminus


id: PF07669
description: Eco57I restriction-modification methylase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07669
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF07669_Eco57I_restriction-modification_methylase


id: PF07717
description: Oligonucleotide/oligosaccharide-binding (OB)-fold
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07717
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF07717_Oligonucleotide/oligosaccharide-binding_(OB)-fold


id: PF07726
description: ATPase family associated with various cellular activities (AAA)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07726
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF07726_ATPase_family_associated_with_various_cellular_activities_(AAA)


id: PF07733
description: Bacterial DNA polymerase III alpha NTPase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07733
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF07733_Bacterial_DNA_polymerase_III_alpha_NTPase_domain


id: PF07927
description: HicA toxin of bacterial toxin-antitoxin,
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07927
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF07927_HicA_toxin_of_bacterial_toxin-antitoxin,_


id: PF07963
description: Prokaryotic N-terminal methylation motif
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07963
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF07963_Prokaryotic_N-terminal_methylation_motif


id: PF07973
description: Threonyl and Alanyl tRNA synthetase second additional domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07973
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF07973_Threonyl_and_Alanyl_tRNA_synthetase_second_additional_domain


id: PF07991
description: Acetohydroxy acid isomeroreductase, NADPH-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07991
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF07991_Acetohydroxy_acid_isomeroreductase,_NADPH-binding_domain


id: PF07992
description: Pyridine nucleotide-disulphide oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07992
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF07992_Pyridine_nucleotide-disulphide_oxidoreductase


id: PF07999
description: Retrotransposon hot spot protein, P-loop domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07999
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF07999_Retrotransposon_hot_spot_protein,_P-loop_domain


id: PF08028
description: Acyl-CoA dehydrogenase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08028
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF08028_Acyl-CoA_dehydrogenase,_C-terminal_domain


id: PF08125
description: Mannitol dehydrogenase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08125
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF08125_Mannitol_dehydrogenase_C-terminal_domain


id: PF08207
description: Elongation factor P (EF-P) KOW-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08207
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF08207_Elongation_factor_P_(EF-P)_KOW-like_domain


id: PF08275
description: DNA primase catalytic core, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08275
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF08275_DNA_primase_catalytic_core,_N-terminal_domain


id: PF08327
description: Activator of Hsp90 ATPase homolog 1-like protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08327
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF08327_Activator_of_Hsp90_ATPase_homolog_1-like_protein


id: PF08334
description: Type II secretion system (T2SS), protein G
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08334
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF08334_Type_II_secretion_system_(T2SS),_protein_G


id: PF08352
description: Oligopeptide/dipeptide transporter, C-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08352
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF08352_Oligopeptide/dipeptide_transporter,_C-terminal_region


id: PF08364
description: Bacterial translation initiation factor IF-2 associated region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08364
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF08364_Bacterial_translation_initiation_factor_IF-2_associated_region


id: PF08379
description: Bacterial transglutaminase-like N-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08379
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF08379_Bacterial_transglutaminase-like_N-terminal_region


id: PF08436
description: 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08436
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF08436_1-deoxy-D-xylulose_5-phosphate_reductoisomerase_C-terminal_domain


id: PF08468
description: Methyltransferase small domain N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08468
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF08468_Methyltransferase_small_domain_N-terminal


id: PF08501
description: Shikimate dehydrogenase substrate binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08501
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF08501_Shikimate_dehydrogenase_substrate_binding_domain


id: PF08541
description: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08541
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF08541_3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III_C_terminal__


id: PF08545
description: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08545
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF08545_3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III


id: PF08840
description: BAAT / Acyl-CoA thioester hydrolase C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08840
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF08840_BAAT_/_Acyl-CoA_thioester_hydrolase_C_terminal


id: PF09157
description: Pseudouridine synthase II TruB, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09157
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF09157_Pseudouridine_synthase_II_TruB,_C-terminal


id: PF09290
description: Prokaryotic acetaldehyde dehydrogenase, dimerisation
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09290
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF09290_Prokaryotic_acetaldehyde_dehydrogenase,_dimerisation


id: PF09330
description: D-lactate dehydrogenase, membrane binding
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09330
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF09330_D-lactate_dehydrogenase,_membrane_binding


id: PF09356
description: Phage conserved hypothetical protein BR0599
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09356
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF09356_Phage_conserved_hypothetical_protein_BR0599


id: PF09526
description: Probable metal-binding protein (DUF2387)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09526
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF09526_Probable_metal-binding_protein_(DUF2387)


id: PF09669
description: Phage regulatory protein Rha (Phage_pRha)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09669
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF09669_Phage_regulatory_protein_Rha_(Phage_pRha)


id: PF09694
description: Bacterial protein of unknown function (Gcw_chp)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09694
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF09694_Bacterial_protein_of_unknown_function_(Gcw_chp)


id: PF09829
description: Uncharacterized protein conserved in bacteria (DUF2057)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09829
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF09829_Uncharacterized_protein_conserved_in_bacteria_(DUF2057)


id: PF09831
description: Uncharacterized protein conserved in bacteria (DUF2058)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09831
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF09831_Uncharacterized_protein_conserved_in_bacteria_(DUF2058)


id: PF09832
description: Uncharacterized protein conserved in bacteria (DUF2059)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09832
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF09832_Uncharacterized_protein_conserved_in_bacteria_(DUF2059)


id: PF09835
description: Uncharacterized protein conserved in bacteria (DUF2062)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09835
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF09835_Uncharacterized_protein_conserved_in_bacteria_(DUF2062)


id: PF09844
description: Uncharacterized conserved protein (COG2071)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09844
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF09844_Uncharacterized_conserved_protein_(COG2071)


id: PF09907
description: HigB_toxin, RelE-like toxic component of a toxin-antitoxin system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09907
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF09907_HigB_toxin,_RelE-like_toxic_component_of_a_toxin-antitoxin_system


id: PF09917
description: Uncharacterized protein conserved in bacteria (DUF2147)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09917
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF09917_Uncharacterized_protein_conserved_in_bacteria_(DUF2147)


id: PF09931
description: Uncharacterized conserved protein (DUF2163)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09931
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF09931_Uncharacterized_conserved_protein_(DUF2163)


id: PF09981
description: Uncharacterized protein conserved in bacteria (DUF2218)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09981
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF09981_Uncharacterized_protein_conserved_in_bacteria_(DUF2218)


id: PF09996
description: Uncharacterized protein conserved in bacteria (DUF2237)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09996
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF09996_Uncharacterized_protein_conserved_in_bacteria_(DUF2237)


id: PF10045
description: Uncharacterized conserved protein (DUF2280)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10045
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF10045_Uncharacterized_conserved_protein_(DUF2280)


id: PF10065
description: Uncharacterized conserved protein (DUF2303)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10065
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF10065_Uncharacterized_conserved_protein_(DUF2303)


id: PF10106
description: Uncharacterized protein conserved in bacteria (DUF2345)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10106
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF10106_Uncharacterized_protein_conserved_in_bacteria_(DUF2345)


id: PF10107
description: Endonuclease related to archaeal Holliday junction resolvase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10107
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF10107_Endonuclease_related_to_archaeal_Holliday_junction_resolvase


id: PF10109
description: Phage tail assembly chaperone proteins, E, or 41 or 14
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10109
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF10109_Phage_tail_assembly_chaperone_proteins,_E,_or_41_or_14


id: PF10385
description: RNA polymerase beta subunit external 1 domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10385
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF10385_RNA_polymerase_beta_subunit_external_1_domain


id: PF10411
description: Disulfide bond isomerase protein N-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10411
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF10411_Disulfide_bond_isomerase_protein_N-terminus


id: PF10417
description: C-terminal domain of 1-Cys peroxiredoxin
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10417
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF10417_C-terminal_domain_of_1-Cys_peroxiredoxin


id: PF10590
description: Pyridoxine 5-phosphate oxidase C-terminal dimerisation region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10590
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF10590_Pyridoxine_5-phosphate_oxidase_C-terminal_dimerisation_region


id: PF10604
description: Polyketide cyclase / dehydrase and lipid transport
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10604
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF10604_Polyketide_cyclase_/_dehydrase_and_lipid_transport


id: PF10620
description: Phosphoribosyl-dephospho-CoA transferase MdcG
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10620
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF10620_Phosphoribosyl-dephospho-CoA_transferase_MdcG


id: PF10947
description: Protein of unknown function (DUF2628)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10947
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF10947_Protein_of_unknown_function_(DUF2628)____


id: PF11612
description: Type II secretion system (T2SS), protein J
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11612
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF11612_Type_II_secretion_system_(T2SS),_protein_J


id: PF11818
description: C-terminal domain of tail specific protease (DUF3340)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11818
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF11818_C-terminal_domain_of_tail_specific_protease_(DUF3340)


id: PF11846
description: Virulence factor membrane-bound polymerase, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11846
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF11846_Virulence_factor_membrane-bound_polymerase,_C-terminal


id: PF11940
description: Domain of unknown function (DUF3458) Ig-like fold
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11940
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF11940_Domain_of_unknown_function_(DUF3458)_Ig-like_fold


id: PF11969
description: Scavenger mRNA decapping enzyme C-term binding
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11969
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF11969_Scavenger_mRNA_decapping_enzyme_C-term_binding


id: PF12137
description: RNA polymerase recycling family C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12137
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF12137_RNA_polymerase_recycling_family_C-terminal


id: PF12169
description: DNA polymerase III subunits gamma and tau domain III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12169
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF12169_DNA_polymerase_III_subunits_gamma_and_tau_domain_III


id: PF12170
description: DNA polymerase III tau subunit V interacting with alpha
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12170
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF12170_DNA_polymerase_III_tau_subunit_V_interacting_with_alpha


id: PF12236
description: Bacteriophage head to tail connecting protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12236
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF12236_Bacteriophage_head_to_tail_connecting_protein


id: PF12320
description: Type 5 capsule protein repressor C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12320
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF12320_Type_5_capsule_protein_repressor_C-terminal_domain


id: PF12391
description: Protocatechuate 3,4-dioxygenase beta subunit N terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12391
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF12391_Protocatechuate_3,4-dioxygenase_beta_subunit_N_terminal


id: PF12399
description: Branched-chain amino acid ATP-binding cassette transporter
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12399
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF12399_Branched-chain_amino_acid_ATP-binding_cassette_transporter


id: PF12501
description: Phosphate ATP-binding cassette transporter
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12501
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF12501_Phosphate_ATP-binding_cassette_transporter


id: PF12625
description: Arabinose-binding domain of AraC transcription regulator, N-term
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12625
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF12625_Arabinose-binding_domain_of_AraC_transcription_regulator,_N-term


id: PF12627
description: Probable RNA and SrmB- binding site of polymerase A
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12627
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF12627_Probable_RNA_and_SrmB-_binding_site_of_polymerase_A


id: PF12769
description: 4TM region of pyridine nucleotide transhydrogenase, mitoch
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12769
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF12769_4TM_region_of_pyridine_nucleotide_transhydrogenase,_mitoch


id: PF12806
description: Acetyl-CoA dehydrogenase C-terminal like
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12806
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF12806_Acetyl-CoA_dehydrogenase_C-terminal_like


id: PF12843
description: Putative quorum-sensing-regulated virulence factor
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12843
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF12843_Putative_quorum-sensing-regulated_virulence_factor


id: PF12850
description: Calcineurin-like phosphoesterase superfamily domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12850
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF12850_Calcineurin-like_phosphoesterase_superfamily_domain


id: PF12911
description: N-terminal TM domain of oligopeptide transport permease C
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12911
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF12911_N-terminal_TM_domain_of_oligopeptide_transport_permease_C


id: PF12977
description: Domain of Unknown Function with PDB structure (DUF3861)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12977
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF12977_Domain_of_Unknown_Function_with_PDB_structure_(DUF3861)


id: PF13005
description: Zinc-finger binding domain of transposase IS66
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13005
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF13005_Zinc-finger_binding_domain_of_transposase_IS66_


id: PF13085
description: 2Fe-2S iron-sulfur cluster binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13085
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF13085_2Fe-2S_iron-sulfur_cluster_binding_domain


id: PF13090
description: Polyphosphate kinase C-terminal domain 2
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13090
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF13090_Polyphosphate_kinase_C-terminal_domain_2


id: PF13296
description: Putative type VI secretion system Rhs element Vgr
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13296
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF13296_Putative_type_VI_secretion_system_Rhs_element_Vgr


id: PF13304
description: AAA domain, putative AbiEii toxin, Type IV TA system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13304
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF13304_AAA_domain,_putative_AbiEii_toxin,_Type_IV_TA_system


id: PF13335
description: Magnesium chelatase, subunit ChlI C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13335
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF13335_Magnesium_chelatase,_subunit_ChlI_C-terminal


id: PF13340
description: Putative transposase of IS4/5 family (DUF4096)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13340
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF13340_Putative_transposase_of_IS4/5_family_(DUF4096)


id: PF13409
description: Glutathione S-transferase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13409
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF13409_Glutathione_S-transferase,_N-terminal_domain


id: PF13410
description: Glutathione S-transferase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13410
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF13410_Glutathione_S-transferase,_C-terminal_domain


id: PF13417
description: Glutathione S-transferase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13417
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF13417_Glutathione_S-transferase,_N-terminal_domain


id: PF13491
description: 4TM region of DNA translocase FtsK/SpoIIIE
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13491
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF13491_4TM_region_of_DNA_translocase_FtsK/SpoIIIE


id: PF13536
description: Putative multidrug resistance efflux transporter
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13536
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF13536_Putative_multidrug_resistance_efflux_transporter


id: PF13557
description: Putative MetA-pathway of phenol degradation
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13557
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF13557_Putative_MetA-pathway_of_phenol_degradation


id: PF13593
description: SBF-like CPA transporter family (DUF4137)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13593
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF13593_SBF-like_CPA_transporter_family_(DUF4137)


id: PF13613
description: Helix-turn-helix of DDE superfamily endonuclease
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13613
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF13613_Helix-turn-helix_of_DDE_superfamily_endonuclease


id: PF13669
description: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13669
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF13669_Glyoxalase/Bleomycin_resistance_protein/Dioxygenase_superfamily


id: PF13720
description: Udp N-acetylglucosamine O-acyltransferase; Domain 2
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13720
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF13720_Udp_N-acetylglucosamine_O-acyltransferase;_Domain_2


id: PF13721
description: SecD export protein N-terminal TM region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13721
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF13721_SecD_export_protein_N-terminal_TM_region


id: PF13722
description: 5TM C-terminal transporter carbon starvation CstA
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13722
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF13722_5TM_C-terminal_transporter_carbon_starvation_CstA


id: PF13723
description: Beta-ketoacyl synthase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13723
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF13723_Beta-ketoacyl_synthase,_N-terminal_domain


id: PF13738
description: Pyridine nucleotide-disulphide oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13738
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF13738_Pyridine_nucleotide-disulphide_oxidoreductase


id: PF13807
description: G-rich domain on putative tyrosine kinase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13807
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF13807_G-rich_domain_on_putative_tyrosine_kinase


id: PF13977
description: BetI-type transcriptional repressor, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13977
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF13977_BetI-type_transcriptional_repressor,_C-terminal


id: PF14226
description: Non-haem dioxygenase in morphine synthesis N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14226
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF14226_Non-haem_dioxygenase_in_morphine_synthesis_N-terminal


id: PF14497
description: Glutathione S-transferase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14497
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF14497_Glutathione_S-transferase,_C-terminal_domain


id: PF14572
description: Phosphoribosyl synthetase-associated domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14572
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF14572_Phosphoribosyl_synthetase-associated_domain


id: PF14602
description: Hexapeptide repeat of succinyl-transferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14602
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF14602_Hexapeptide_repeat_of_succinyl-transferase


id: PF14667
description: Polysaccharide biosynthesis C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14667
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF14667_Polysaccharide_biosynthesis_C-terminal_domain


id: PF14691
description: Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14691
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF14691_Dihydroprymidine_dehydrogenase_domain_II,_4Fe-4S_cluster


id: PF14696
description: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14696
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF14696_Hydroxyphenylpyruvate_dioxygenase,_HPPD,_N-terminal_


id: PF14714
description: KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14714
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF14714_KH-domain-like_of_EngA_bacterial_GTPase_enzymes,_C-terminal


id: PF14748
description: Pyrroline-5-carboxylate reductase dimerisation
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14748
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF14748_Pyrroline-5-carboxylate_reductase_dimerisation


id: PF14805
description: Tetrahydrodipicolinate N-succinyltransferase N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14805
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF14805_Tetrahydrodipicolinate_N-succinyltransferase_N-terminal


id: PF14814
description: Bifunctional transglycosylase second domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14814
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF14814_Bifunctional_transglycosylase_second_domain


id: PF14819
description: Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14819
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF14819_Nitrile_reductase,_7-cyano-7-deazaguanine-reductase_N-term


id: PF14833
description: NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14833
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF14833_NAD-binding_of_NADP-dependent_3-hydroxyisobutyrate_dehydrogenase


id: PF14850
description: DNA-binding domain of Proline dehydrogenase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14850
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF14850_DNA-binding_domain_of_Proline_dehydrogenase


id: PF14883
description: Hypothetical glycosyl hydrolase family 13
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14883
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF14883_Hypothetical_glycosyl_hydrolase_family_13


id: PF14905
description: Outer membrane protein beta-barrel family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14905
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF14905_Outer_membrane_protein_beta-barrel_family


id: PF15919
description: HicB_like antitoxin of bacterial toxin-antitoxin system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF15919
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF15919_HicB_like_antitoxin_of_bacterial_toxin-antitoxin_system


id: PF15970
description: HicB_like antitoxin of bacterial toxin-antitoxin system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF15970
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF15970_HicB_like_antitoxin_of_bacterial_toxin-antitoxin_system


id: PF16123
description: Hydroxyacylglutathione hydrolase C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16123
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF16123_Hydroxyacylglutathione_hydrolase_C-terminus


id: PF16198
description: tRNA pseudouridylate synthase B C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16198
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF16198_tRNA_pseudouridylate_synthase_B_C-terminal_domain


id: PF16320
description: Ribosomal protein L7/L12 dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16320
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF16320_Ribosomal_protein_L7/L12_dimerisation_domain


id: PF16576
description: Barrel-sandwich domain of CusB or HlyD membrane-fusion
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16576
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF16576_Barrel-sandwich_domain_of_CusB_or_HlyD_membrane-fusion


id: PF16655
description: PhoD-like phosphatase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16655
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF16655_PhoD-like_phosphatase,_N-terminal_domain


id: PF16732
description: Type IV minor pilin ComP, DNA uptake sequence receptor
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16732
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF16732_Type_IV_minor_pilin_ComP,_DNA_uptake_sequence_receptor


id: PF16859
description: Tetracyclin repressor-like, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16859
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF16859_Tetracyclin_repressor-like,_C-terminal_domain


id: PF16881
description: N-terminal domain of lipoyl synthase of Radical_SAM family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16881
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF16881_N-terminal_domain_of_lipoyl_synthase_of_Radical_SAM_family


id: PF16901
description: C-terminal domain of alpha-glycerophosphate oxidase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16901
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF16901_C-terminal_domain_of_alpha-glycerophosphate_oxidase


id: PF16925
description: Tetracyclin repressor-like, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16925
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF16925_Tetracyclin_repressor-like,_C-terminal_domain


id: PF16951
description: Putative methionine and alanine importer, small subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16951
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF16951_Putative_methionine_and_alanine_importer,_small_subunit


id: PF16957
description: Malonate decarboxylase, alpha subunit, transporter
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16957
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF16957_Malonate_decarboxylase,_alpha_subunit,_transporter


id: PF17092
description: Penicillin-binding protein OB-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17092
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF17092_Penicillin-binding_protein_OB-like_domain


id: PF17136
description: Ribosomal proteins 50S L24/mitochondrial 39S L24
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17136
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF17136_Ribosomal_proteins_50S_L24/mitochondrial_39S_L24


id: PF17297
description: Phosphoenolpyruvate carboxykinase N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17297
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF17297_Phosphoenolpyruvate_carboxykinase_N-terminal_domain


id: PF17432
description: Domain of unknown function (DUF3458_C) ARM repeats
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17432
name:
  Protein Domains (Pfam).STRING_v12.0_202954_STRINGid_PF17432_Domain_of_unknown_function_(DUF3458_C)_ARM_repeats


id: SM00044
description: Adenylyl- / guanylyl cyclase, catalytic domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00044
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00044_Adenylyl-_/_guanylyl_cyclase,_catalytic_domain


id: SM00046
description: Diacylglycerol kinase catalytic domain (presumed)
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00046
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00046_Diacylglycerol_kinase_catalytic_domain_(presumed)


id: SM00062
description: Bacterial periplasmic substrate-binding proteins
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00062
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00062_Bacterial_periplasmic_substrate-binding_proteins


id: SM00065
description: Domain present in phytochromes and cGMP-specific phosphodiesterases.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00065
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00065_Domain_present_in_phytochromes_and_cGMP-specific_phosphodiesterases.


id: SM00086
description: Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00086
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00086_Motif_C-terminal_to_PAS_motifs_(likely_to_contribute_to_PAS_structural_domain)


id: SM00100
description: Cyclic nucleotide-monophosphate binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00100
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00100_Cyclic_nucleotide-monophosphate_binding_domain


id: SM00116
description: Domain in cystathionine beta-synthase and other proteins.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00116
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00116_Domain_in_cystathionine_beta-synthase_and_other_proteins.


id: SM00226
description: Low molecular weight phosphatase family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00226
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00226_Low_molecular_weight_phosphatase_family


id: SM00228
description: Domain present in PSD-95, Dlg, and ZO-1/2.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00228
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00228_Domain_present_in_PSD-95,_Dlg,_and_ZO-1/2.


id: SM00260
description: Two component signalling adaptor domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00260
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00260_Two_component_signalling_adaptor_domain


id: SM00271
description: DnaJ molecular chaperone homology domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00271
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00271_DnaJ_molecular_chaperone_homology_domain


id: SM00278
description: Helix-hairpin-helix DNA-binding motif class 1
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00278
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00278_Helix-hairpin-helix_DNA-binding_motif_class_1


id: SM00279
description: Helix-hairpin-helix class 2 (Pol1 family) motifs
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00279
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00279_Helix-hairpin-helix_class_2_(Pol1_family)_motifs


id: SM00283
description: Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00283
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00283_Methyl-accepting_chemotaxis-like_domains_(chemotaxis_sensory_transducer).


id: SM00304
description: HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00304
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00304_HAMP_(Histidine_kinases,_Adenylyl_cyclases,_Methyl_binding_proteins,_Phosphatases)_domain


id: SM00316
description: Ribosomal protein S1-like RNA-binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00316
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00316_Ribosomal_protein_S1-like_RNA-binding_domain


id: SM00327
description: Von Willebrand factor (vWF) type A domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00327
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00327_Von_Willebrand_factor_(vWF)_type_A_domain


id: SM00342
description: Helix_turn_helix, arabinose operon control protein
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00342
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00342_Helix_turn_helix,_arabinose_operon_control_protein


id: SM00345
description: Helix_turn_helix gluconate operon transcriptional repressor
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00345
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00345_Helix_turn_helix_gluconate_operon_transcriptional_repressor


id: SM00346
description: Helix_turn_helix isocitrate lyase regulation
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00346
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00346_Helix_turn_helix_isocitrate_lyase_regulation


id: SM00347
description: Helix_turn_helix multiple antibiotic resistance protein
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00347
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00347_Helix_turn_helix_multiple_antibiotic_resistance_protein


id: SM00359
description: Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00359
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00359_Putative_RNA-binding_Domain_in_PseudoUridine_synthase_and_Archaeosine_transglycosylase


id: SM00382
description: ATPases associated with a variety of cellular activities
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00382
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00382_ATPases_associated_with_a_variety_of_cellular_activities


id: SM00411
description: Bacterial (prokaryotic) histone like domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00411
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00411_Bacterial_(prokaryotic)_histone_like_domain


id: SM00418
description: Helix_turn_helix, Arsenical Resistance Operon Repressor
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00418
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00418_Helix_turn_helix,_Arsenical_Resistance_Operon_Repressor


id: SM00419
description: Helix_turn_helix, cAMP Regulatory protein
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00419
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00419_Helix_turn_helix,_cAMP_Regulatory_protein


id: SM00436
description: Bacterial DNA topoisomeraes I ATP-binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00436
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00436_Bacterial_DNA_topoisomeraes_I_ATP-binding_domain


id: SM00437
description: Bacterial DNA topoisomerase I DNA-binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00437
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00437_Bacterial_DNA_topoisomerase_I_DNA-binding_domain


id: SM00460
description: Transglutaminase/protease-like homologues
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00460
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00460_Transglutaminase/protease-like_homologues


id: SM00464
description: Found in ATP-dependent protease La (LON)
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00464
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00464_Found_in_ATP-dependent_protease_La_(LON)


id: SM00471
description: Metal dependent phosphohydrolases with conserved HD motif.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00471
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00471_Metal_dependent_phosphohydrolases_with_conserved_HD_motif.


id: SM00479
description: Exonuclease domain in DNA-polymerase alpha and epsilon chain, ribonuclease T and other exonucleases
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00479
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00479_Exonuclease_domain_in_DNA-polymerase_alpha_and_epsilon_chain,_ribonuclease_T_and_other_exonucleases


id: SM00493
description: Topoisomerases, DnaG-type primases, OLD family nucleases and RecR proteins
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00493
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00493_Topoisomerases,_DnaG-type_primases,_OLD_family_nucleases_and_RecR_proteins


id: SM00525
description: Iron-sulpphur binding domain in DNA-(apurinic or apyrimidinic site) lyase (subfamily of ENDO3)
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00525
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00525_Iron-sulpphur_binding_domain_in_DNA-(apurinic_or_apyrimidinic_site)_lyase_(subfamily_of_ENDO3)


id: SM00528
description: Domain in histone-like proteins of HNS family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00528
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00528_Domain_in_histone-like_proteins_of_HNS_family


id: SM00530
description: Helix-turn-helix XRE-family like proteins
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00530
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00530_Helix-turn-helix_XRE-family_like_proteins


id: SM00533
description: DNA-binding domain of DNA mismatch repair MUTS family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00533
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00533_DNA-binding_domain_of_DNA_mismatch_repair_MUTS_family


id: SM00534
description: ATPase domain of DNA mismatch repair MUTS family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00534
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00534_ATPase_domain_of_DNA_mismatch_repair_MUTS_family


id: SM00558
description: A domain family that is part of the cupin metalloenzyme superfamily.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00558
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00558_A_domain_family_that_is_part_of_the_cupin_metalloenzyme_superfamily.


id: SM00670
description: Large family of predicted nucleotide-binding domains
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00670
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00670_Large_family_of_predicted_nucleotide-binding_domains


id: SM00702
description: Prolyl 4-hydroxylase alpha subunit homologues.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00702
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00702_Prolyl_4-hydroxylase_alpha_subunit_homologues.


id: SM00729
description: Elongator protein 3, MiaB family, Radical SAM
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00729
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00729_Elongator_protein_3,_MiaB_family,_Radical_SAM


id: SM00738
description: In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00738
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00738_In_Spt5p,_this_domain_may_confer_affinity_for_Spt4p._It_possesses_a_RNP-like_fold.


id: SM00760
description: Bacterial dnaA protein helix-turn-helix domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00760
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00760_Bacterial_dnaA_protein_helix-turn-helix_domain


id: SM00778
description: Zinc-binding domain of primase-helicase
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00778
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00778_Zinc-binding_domain_of_primase-helicase


id: SM00833
description: Cobalamin synthesis protein cobW C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00833
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00833_Cobalamin_synthesis_protein_cobW_C-terminal_domain


id: SM00839
description: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00839
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00839_Glutamate/Leucine/Phenylalanine/Valine_dehydrogenase


id: SM00840
description: This DALR domain is found in cysteinyl-tRNA-synthetases.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00840
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00840_This_DALR_domain_is_found_in_cysteinyl-tRNA-synthetases.


id: SM00843
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00843
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00843_This_domain_directs_oriented_DNA_translocation_and_forms_a_winged_helix_structure._Mutated_proteins_with_substitutions_in_the_FtsK_gamma_DNA-recognition_helix_are_impaired_in_DNA_binding.

description:
  This domain directs oriented DNA translocation and forms a winged helix structure. Mutated proteins with substitutions in the FtsK gamma DNA-recognition helix are impaired in DNA binding.


id: SM00846
description: Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00846
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00846_Glyceraldehyde_3-phosphate_dehydrogenase,_NAD_binding_domain


id: SM00847
description: Helicase associated domain (HA2) Add an annotation
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00847
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00847_Helicase_associated_domain_(HA2)__Add_an_annotation


id: SM00858
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00858
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00858_This_domain_family_includes_a_range_of_different_proteins._Such_as_antifreeze_proteins_and_flagellar_FlgA_proteins,_and_CpaB_pilus_proteins.

description:
  This domain family includes a range of different proteins. Such as antifreeze proteins and flagellar FlgA proteins, and CpaB pilus proteins.


id: SM00859
description: Semialdehyde dehydrogenase, NAD binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00859
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00859_Semialdehyde_dehydrogenase,_NAD_binding_domain


id: SM00861
description: Transketolase, pyrimidine binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00861
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00861_Transketolase,_pyrimidine_binding_domain


id: SM00862
description: Transcriptional regulatory protein, C terminal
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00862
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00862_Transcriptional_regulatory_protein,_C_terminal


id: SM00863
description: Threonyl and Alanyl tRNA synthetase second additional domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00863
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00863_Threonyl_and_Alanyl_tRNA_synthetase_second_additional_domain


id: SM00866
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00866
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00866_The_UbiC_transcription_regulator-associated_(UTRA)_domain_is_a_conserved_ligand-binding_domain_that_has_a_similar_fold_to_PUBMED:12757941._It_is_believed_to_modulate_activity_of_bacterial_transcription_factors_in_response_to_binding_small_molecules.

description:
  The UbiC transcription regulator-associated (UTRA) domain is a conserved ligand-binding domain that has a similar fold to PUBMED:12757941. It is believed to modulate activity of bacterial transcription factors in response to binding small molecules.


id: SM00870
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00870
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00870_Asparaginase,_which_is_found_in_various_plant,_animal_and_bacterial_cells,_catalyses_the_deamination_of_asparagine_to_yield_aspartic_acid_and_an_ammonium_ion,_resulting_in_a_depletion_of_free_circulatory_asparagine_in_plasma_PUBMED:3026924._The_...

description:
  Asparaginase, which is found in various plant, animal and bacterial cells, catalyses the deamination of asparagine to yield aspartic acid and an ammonium ion, resulting in a depletion of free circulatory asparagine in plasma PUBMED:3026924. The ...


id: SM00876
description: Biotin and Thiamin Synthesis associated domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00876
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00876_Biotin_and_Thiamin_Synthesis_associated_domain


id: SM00880
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00880
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00880_The_CHAD_domain_is_an_alpha-helical_domain_functionally_associated_with_some_members_of_the_adenylate_cyclase_family_._It_has_conserved_histidines_that_may_chelate_metals.

description:
  The CHAD domain is an alpha-helical domain functionally associated with some members of the adenylate cyclase family . It has conserved histidines that may chelate metals.


id: SM00895
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00895
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00895_This_entry_represents_the_C-terminal_ligand_binding_domain_of_many_members_of_the_GntR_family._This_domain_probably_binds_to_a_range_of_effector_molecules_that_regulate_the_transcription_of_genes_through_the_action_of_the_N-terminal_DNA-binding_...

description:
  This entry represents the C-terminal ligand binding domain of many members of the GntR family. This domain probably binds to a range of effector molecules that regulate the transcription of genes through the action of the N-terminal DNA-binding ...


id: SM00896
description: Ferredoxin-fold anticodon binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00896
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00896_Ferredoxin-fold_anticodon_binding_domain


id: SM00898
description: Formamidopyrimidine-DNA glycosylase N-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00898
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00898_Formamidopyrimidine-DNA_glycosylase_N-terminal_domain


id: SM00899
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00899
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00899_This_entry_represents_the_core_domain_of_the_ferrous_iron_(Fe2+)_transport_protein_FeoA_found_in_bacteria._This_domain_also_occurs_at_the_C-terminus_in_related_proteins._The_transporter_Feo_is_composed_of_three_proteins:_FeoA_a_small,_soluble_...

description:
  This entry represents the core domain of the ferrous iron (Fe2+) transport protein FeoA found in bacteria. This domain also occurs at the C-terminus in related proteins. The transporter Feo is composed of three proteins: FeoA a small, soluble ...


id: SM00901
description: This domain contains a conserved N-terminal (F/Y)RG motif. It is functionally uncharacterised.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00901
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00901_This_domain_contains_a_conserved_N-terminal_(F/Y)RG_motif._It_is_functionally_uncharacterised.


id: SM00922
description: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00922
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00922_Mandelate_racemase_/_muconate_lactonizing_enzyme,_C-terminal_domain


id: SM00926
description: Molybdopterin oxidoreductase Fe4S4 domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00926
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00926_Molybdopterin_oxidoreductase_Fe4S4_domain


id: SM00928
description: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00928
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00928_NADH-ubiquinone_oxidoreductase-F_iron-sulfur_binding_region


id: SM00929
description: NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00929
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00929_NADH-ubiquinone_oxidoreductase-G_iron-sulfur_binding_region


id: SM00930
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00930
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00930_This_domain_is_found_at_the_C-terminus_of_ABC_transporter_proteins_involved_in_D-methionine_transport_as_well_as_a_number_of_ferredoxin-like_proteins._This_domain_is_likely_to_act_as_a_substrate_binding_domain._The_domain_has_been_named_after_a_...

description:
  This domain is found at the C-terminus of ABC transporter proteins involved in D-methionine transport as well as a number of ferredoxin-like proteins. This domain is likely to act as a substrate binding domain. The domain has been named after a ...


id: SM00934
description: Orotidine 5-phosphate decarboxylase / HUMPS family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00934
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00934_Orotidine_5-phosphate_decarboxylase_/_HUMPS_family


id: SM00936
description: Penicillin-binding protein 5, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00936
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00936_Penicillin-binding_protein_5,_C-terminal_domain


id: SM00937
description: This domain is found in peptide chain release factors.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00937
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00937_This_domain_is_found_in_peptide_chain_release_factors.


id: SM00955
description: This domain is the catalytic domain of ribonuclease II.PUBMED:16806266
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00955
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00955_This_domain_is_the_catalytic_domain_of_ribonuclease_II.PUBMED:16806266


id: SM00959
description: Rho termination factor, N-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00959
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00959_Rho_termination_factor,_N-terminal_domain


id: SM00963
description: SRP54-type protein, helical bundle domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00963
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00963_SRP54-type_protein,_helical_bundle_domain


id: SM00965
description: Secretin and TonB N terminus short domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00965
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00965_Secretin_and_TonB_N_terminus_short_domain


id: SM00967
description: RNA 2-O ribose methyltransferase substrate binding
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00967
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00967_RNA_2-O_ribose_methyltransferase_substrate_binding


id: SM00978
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00978
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00978_Tim44_is_an_essential_component_of_the_machinery_that_mediates_the_translocation_of_nuclear-encoded_proteins_across_the_mitochondrial_inner_membrane_PUBMED:10430866._Tim44_is_thought_to_bind_phospholipids_of_the_mitochondrial_inner_membrane_both_by_...

description:
  Tim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane PUBMED:10430866. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by ...


id: SM00981
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00981
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00981_The_THUMP_domain_is_named_after_after_thiouridine_synthases,_methylases_and_PSUSs_PUBMED:11295541._The_THUMP_domain_consists_of_about_110_amino_acid_residues._The_structure_of_ThiI_reveals_that_the_THUMP_has_a_fold_unlike_that_of_previously_...

description:
  The THUMP domain is named after after thiouridine synthases, methylases and PSUSs PUBMED:11295541. The THUMP domain consists of about 110 amino acid residues. The structure of ThiI reveals that the THUMP has a fold unlike that of previously ...


id: SM00982
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00982
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00982_This_domain_is_found_in_proteins_necessary_for_strand-specific_repair_in_DNA_such_as_TRCF_in_Escherichia_coli._A_lesion_in_the_template_strand_blocks_the_RNA_polymerase_complex_(RNAP)._The_RNAP-DNA-RNA_complex_is_specifically_recognised_by_the_...

description:
  This domain is found in proteins necessary for strand-specific repair in DNA such as TRCF in Escherichia coli. A lesion in the template strand blocks the RNA polymerase complex (RNAP). The RNAP-DNA-RNA complex is specifically recognised by the ...


id: SM00987
description: UreE urease accessory protein, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00987
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00987_UreE_urease_accessory_protein,_C-terminal_domain


id: SM00997
description: S-adenosyl-L-homocysteine hydrolase, NAD binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00997
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM00997_S-adenosyl-L-homocysteine_hydrolase,_NAD_binding_domain


id: SM01002
description: Alanine dehydrogenase/PNT, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01002
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM01002_Alanine_dehydrogenase/PNT,_C-terminal_domain


id: SM01003
description: Alanine dehydrogenase/PNT, N-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01003
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM01003_Alanine_dehydrogenase/PNT,_N-terminal_domain


id: SM01007
description: Class II Aldolase and Adducin N-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01007
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM01007_Class_II_Aldolase_and_Adducin_N-terminal_domain


id: SM01012
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01012
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM01012_ANTAR_(AmiR_and_NasR_transcription_antitermination_regulators)_is_an_RNA-binding_domain_found_in_bacterial_transcription_antitermination_regulatory_proteins._The_majority_of_the_domain_consists_of_a_coiled-coil.

description:
  ANTAR (AmiR and NasR transcription antitermination regulators) is an RNA-binding domain found in bacterial transcription antitermination regulatory proteins. The majority of the domain consists of a coiled-coil.


id: SM01060
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01060
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM01060_Catalases_are_antioxidant_enzymes_that_catalyse_the_conversion_of_hydrogen_peroxide_to_water_and_molecular_oxygen,_serving_to_protect_cells_from_its_toxic_effects_PUBMED:11351128._Hydrogen_peroxide_is_produced_as_a_consequence_of_oxidative_cellular_...

description:
  Catalases are antioxidant enzymes that catalyse the conversion of hydrogen peroxide to water and molecular oxygen, serving to protect cells from its toxic effects PUBMED:11351128. Hydrogen peroxide is produced as a consequence of oxidative cellular ...


id: SM01086
description: C-terminal, D2-small domain, of ClpB protein
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01086
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM01086_C-terminal,_D2-small_domain,_of_ClpB_protein


id: SM01096
description: Carbamoyl-phosphate synthetase large chain, oligomerisation domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01096
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM01096_Carbamoyl-phosphate_synthetase_large_chain,_oligomerisation_domain


id: SM01097
description: Carbamoyl-phosphate synthase small chain, CPSase domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01097
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM01097_Carbamoyl-phosphate_synthase_small_chain,_CPSase_domain


id: SM01103
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01103
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM01103_Escherichia_coli_YhbY_is_associated_with_pre-50S_ribosomal_subunits,_which_implies_a_function_in_ribosome_assembly._GFP_fused_to_a_single-domain_CRM_protein_from_maize_localises_to_the_nucleolus,_suggesting_that_an_analogous_activity_may_have_been_...

description:
  Escherichia coli YhbY is associated with pre-50S ribosomal subunits, which implies a function in ribosome assembly. GFP fused to a single-domain CRM protein from maize localises to the nucleolus, suggesting that an analogous activity may have been ...


id: SM01118
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01118
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM01118_These_sequences_are_functionally_identified_as_members_of_the_adenylate_cyclase_family,_which_catalyses_the_conversion_of_ATP_to_3,5-cyclic_AMP_and_pyrophosphate._Six_distinct_non-homologous_classes_of_AC_have_been_identified._The_structure_of_...

description:
  These sequences are functionally identified as members of the adenylate cyclase family, which catalyses the conversion of ATP to 3,5-cyclic AMP and pyrophosphate. Six distinct non-homologous classes of AC have been identified. The structure of ...


id: SM01209
description: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01209
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM01209_Phosphoribosylglycinamide_synthetase,_ATP-grasp_(A)_domain


id: SM01210
description: Phosphoribosylglycinamide synthetase, C domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01210
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM01210_Phosphoribosylglycinamide_synthetase,_C_domain


id: SM01211
description: CobB/CobQ-like glutamine amidotransferase domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01211
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM01211_CobB/CobQ-like_glutamine_amidotransferase_domain


id: SM01231
description: Signal transducing histidine kinase, homodimeric domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01231
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM01231_Signal_transducing_histidine_kinase,_homodimeric_domain


id: SM01232
description: Formamidopyrimidine-DNA glycosylase H2TH domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01232
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM01232_Formamidopyrimidine-DNA_glycosylase_H2TH_domain


id: SM01234
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01234
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM01234_This_domain_has_haemolytic_activity_(PMID:19306042)._It_is_found_in_short_(73-103_amino_acid)_proteins_and_contains_three_conserved_cysteine_residues.

description:
  This domain has haemolytic activity (PMID:19306042). It is found in short (73-103 amino acid) proteins and contains three conserved cysteine residues.


id: SM01252
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01252
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM01252_Conserved_DNA-binding_domain_that_is_found_in_a_wide_range_of_proteins_of_large_bacterial_and_eukaryotic_DNA_viruses.

description:
  Conserved DNA-binding domain that is found in a wide range of proteins of large bacterial and eukaryotic DNA viruses.


id: SM01322
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01322
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM01322_This_family_consists_of_several_hypothetical_bacterial_proteins_of_around_180_residues_in_length_which_are_often_known_as_YaeQ._YaeQ_is_homologous_to_RfaH,_a_specialised_transcription_elongation_protein._YaeQ_is_known_to_compensate_for_loss_of_RfaH_...

description:
  This family consists of several hypothetical bacterial proteins of around 180 residues in length which are often known as YaeQ. YaeQ is homologous to RfaH, a specialised transcription elongation protein. YaeQ is known to compensate for loss of RfaH ...


id: SM01324
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01324
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM01324_This_presumed_extracellular_domain_is_about_70_amino_acids_in_length._It_is_named_YARHG_after_a_conserved_motif_in_the_sequence._This_domain_is_associated_with_peptidases_and_bacterial_kinase_proteins._Its_molecular_function_is_unknown.

description:
  This presumed extracellular domain is about 70 amino acids in length. It is named YARHG after a conserved motif in the sequence. This domain is associated with peptidases and bacterial kinase proteins. Its molecular function is unknown.


id: SM01329
description: Isocitrate/isopropylmalate dehydrogenase
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01329
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM01329_Isocitrate/isopropylmalate_dehydrogenase


id: SM01340
description: DNA mismatch repair protein, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01340
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM01340_DNA_mismatch_repair_protein,_C-terminal_domain


id: SM01382
description: Ribosomal Proteins L2, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01382
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM01382_Ribosomal_Proteins_L2,_C-terminal_domain


id: SM01383
description: Ribosomal Proteins L2, RNA binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01383
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM01383_Ribosomal_Proteins_L2,_RNA_binding_domain


id: SM01390
description: Ribosomal protein S4/S9 N-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01390
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM01390_Ribosomal_protein_S4/S9_N-terminal_domain


id: SM01400
description: N-terminal domain of ribose phosphate pyrophosphokinase
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01400
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM01400_N-terminal_domain_of_ribose_phosphate_pyrophosphokinase


id: SM01434
description: PD-(D/E)XK nuclease transposase sub-family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01434
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM01434_PD-(D/E)XK_nuclease_transposase_sub-family


id: SM01437
description: Serine recombinase conjugative transposon sub-family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01437
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM01437_Serine_recombinase_conjugative_transposon_sub-family


id: SM01468
description: HUH conjugative element mobility domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01468
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM01468_HUH_conjugative_element_mobility_domain


id: SM01473
description: HUH conjugative element mobility domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01473
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM01473_HUH_conjugative_element_mobility_domain


id: SM01477
description: DDE transposase retroviral integrase sub-family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01477
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM01477_DDE_transposase_retroviral_integrase_sub-family


id: SM01488
description: DDE transposase retroviral integrase sub-family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01488
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM01488_DDE_transposase_retroviral_integrase_sub-family


id: SM01494
description: DDE transposase retroviral integrase sub-family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01494
name:
  Protein Domains (SMART).STRING_v12.0_202954_STRINGid_SM01494_DDE_transposase_retroviral_integrase_sub-family


