# geneInfo

ensembl_gene_id: RS9917_00025
symbol: EAQ67828.1
gene_biotype: protein_coding
description:
  Sigma-70 region 2; COG1191 DNA-directed RNA polymerase specialized sigma subunit; Belongs to the sigma-70 factor family.


ensembl_gene_id: RS9917_00130
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: RS9917_00145
symbol: hslO
gene_biotype: protein_coding
description:
  Possible 33kD chaperonin, heat shock protein; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.


ensembl_gene_id: RS9917_00150
symbol: EAQ67853.1
gene_biotype: protein_coding
description:
  Possible ABC transporter, ATP-binding component; COG1122 ABC-type cobalt transport system, ATPase component.


ensembl_gene_id: RS9917_00160
symbol: EAQ67855.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: RS9917_00175
symbol: EAQ67858.1
gene_biotype: protein_coding
description:
  Putative type III sigma factor; COG1191 DNA-directed RNA polymerase specialized sigma subunit; Belongs to the sigma-70 factor family.


ensembl_gene_id: RS9917_00195
symbol: EAQ67862.1
gene_biotype: protein_coding
description:
  Phosphonate-binding periplasmic protein; COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component.


ensembl_gene_id: RS9917_00210
symbol: ispG
gene_biotype: protein_coding
description:
  1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: RS9917_00215
symbol: EAQ67866.1
gene_biotype: protein_coding
description:
  Carboxyl-terminal processing protease; COG0793 Periplasmic protease; Belongs to the peptidase S41A family.


ensembl_gene_id: RS9917_00225
symbol: mfd
gene_biotype: protein_coding
description:
  Transcriptional-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: RS9917_00260
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: RS9917_00265
symbol: EAQ67876.1
gene_biotype: protein_coding
description:
  Possible modulator of DNA gyrase; COG0312 Predicted Zn-dependent proteases and their inactivated homologs.


ensembl_gene_id: RS9917_00270
symbol: EAQ67877.1
gene_biotype: protein_coding
description:
  Putative modulator of DNA gyrase; COG0312 Predicted Zn-dependent proteases and their inactivated homologs.


ensembl_gene_id: RS9917_00275
symbol: acsF
gene_biotype: protein_coding
description:
  Magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase; Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME); Belongs to the AcsF family.


ensembl_gene_id: RS9917_00290
symbol: ubiX
gene_biotype: protein_coding
description:
  Phenylacrylic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: RS9917_00295
symbol: EAQ67882.1
gene_biotype: protein_coding
description:
  Putative acetazolamide conferring resistance protein Zam; COG0557 Exoribonuclease R; Belongs to the RNR ribonuclease family.


ensembl_gene_id: RS9917_00347
symbol: rpmF
gene_biotype: protein_coding
description:
  Ribosomal protein S32, bacterial and organelle form; Belongs to the bacterial ribosomal protein bL32 family.


ensembl_gene_id: RS9917_00352
symbol: ftsH
gene_biotype: protein_coding
description:
  Cell division protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: RS9917_00387
symbol: EAQ68771.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component.


ensembl_gene_id: RS9917_00412
symbol: EAQ68776.1
gene_biotype: protein_coding
description:
  Glutathione-dependent formaldehyde dehydrogenase; COG1062 Zn-dependent alcohol dehydrogenases, class III.


ensembl_gene_id: RS9917_00417
symbol: EAQ68777.1
gene_biotype: protein_coding
description:
  Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: RS9917_00422
symbol: EAQ68778.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).


ensembl_gene_id: RS9917_00502
symbol: EAQ68794.1
gene_biotype: protein_coding
description:
  Phospholipase D/Transphosphatidylase; COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes.


ensembl_gene_id: RS9917_00552
symbol: EAQ68804.1
gene_biotype: protein_coding
description:
  Nuclease (SNase); Similar to Staphylococcus nuclease; COG1525 Micrococcal nuclease (thermonuclease) homologs.


ensembl_gene_id: RS9917_00557
symbol: vapC
gene_biotype: protein_coding
description:
  Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.


ensembl_gene_id: RS9917_00577
symbol: EAQ68809.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain.


ensembl_gene_id: RS9917_00582
symbol: vapC-2
gene_biotype: protein_coding
description:
  PilT protein-like; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.


ensembl_gene_id: RS9917_00597
symbol: EAQ68813.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, LuxR family protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.


ensembl_gene_id: RS9917_00632
symbol: EAQ68820.1
gene_biotype: protein_coding
description:
  ABC transporter, substrate binding protein, phosphate; COG0226 ABC-type phosphate transport system, periplasmic component.


ensembl_gene_id: RS9917_00642
symbol: EAQ68822.1
gene_biotype: protein_coding
description:
  Putative arsenite transporter, ACR3 family protein; COG0798 Arsenite efflux pump ACR3 and related permeases.


ensembl_gene_id: RS9917_00667
symbol: EAQ68827.1
gene_biotype: protein_coding
description:
  COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: RS9917_00672
symbol: EAQ68828.1
gene_biotype: protein_coding
description:
  Multidrug efflux transporter, MFS family protein; COG0477 Permeases of the major facilitator superfamily.


ensembl_gene_id: RS9917_00677
symbol: EAQ68829.1
gene_biotype: protein_coding
description:
  ABC transporter, substrate binding protein component, possibly phosphate; COG0226 ABC-type phosphate transport system, periplasmic component.


ensembl_gene_id: RS9917_00697
symbol: EAQ68833.1
gene_biotype: protein_coding
description:
  SAM (and some other nucleotide) binding motif; COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase.


ensembl_gene_id: RS9917_00747
symbol: psbY
gene_biotype: protein_coding
description:
  Hypothetical protein; Manganese-binding polypeptide with L-arginine metabolizing enzyme activity. Component of the core of photosystem II. Belongs to the PsbY family.


ensembl_gene_id: RS9917_00752
symbol: trmFO
gene_biotype: protein_coding
description:
  Probable glucose inhibited division protein; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.


ensembl_gene_id: RS9917_00757
symbol: EAQ68845.1
gene_biotype: protein_coding
description:
  Putative cation efflux transporter (CDF family protein); COG3965 Predicted Co/Zn/Cd cation transporters.


ensembl_gene_id: RS9917_00777
symbol: EAQ68849.1
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family protein; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.


ensembl_gene_id: RS9917_00792
symbol: EAQ68852.1
gene_biotype: protein_coding
description:
  BolA family protein; COG0271 Stress-induced morphogen (activity unknown); Belongs to the BolA/IbaG family.


ensembl_gene_id: RS9917_00807
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxal phosphate biosynthetic protein PdxJ; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: RS9917_00837
symbol: EAQ68861.1
gene_biotype: protein_coding
description:
  Similar to UvrD/REP helicase; COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains).


ensembl_gene_id: RS9917_00842
symbol: EAQ68862.1
gene_biotype: protein_coding
description:
  Probable exodeoxyribonuclease V, alpha subunit RecD; COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member.


ensembl_gene_id: RS9917_00852
symbol: deaD
gene_biotype: protein_coding
description:
  Putative ATP-dependent RNA helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.


ensembl_gene_id: RS9917_00877
symbol: EAQ68869.1
gene_biotype: protein_coding
description:
  ABC transporter, multidrug efflux family protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.


ensembl_gene_id: RS9917_00882
symbol: EAQ68870.1
gene_biotype: protein_coding
description:
  Possible Na+/H+ antiporter, CPA2 family protein; COG0475 Kef-type K+ transport systems, membrane components.


ensembl_gene_id: RS9917_00927
symbol: recR
gene_biotype: protein_coding
description:
  RecR protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: RS9917_00932
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: RS9917_00957
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: RS9917_00962
symbol: EAQ68886.1
gene_biotype: protein_coding
description:
  Undecaprenyl pyrophosphate synthetase (UPPS); Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: RS9917_00967
symbol: dacA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: RS9917_00972
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: RS9917_00982
symbol: EAQ68890.1
gene_biotype: protein_coding
description:
  Endopeptidase Clp ATP-binding chain C; COG0542 ATPases with chaperone activity, ATP-binding subunit; Belongs to the ClpA/ClpB family.


ensembl_gene_id: RS9917_01002
symbol: EAQ68894.1
gene_biotype: protein_coding
description:
  Phosphatidate cytidylyltransferase:Putative integral membrane; COG0575 CDP-diglyceride synthetase; Belongs to the CDS family.


ensembl_gene_id: RS9917_01022
symbol: EAQ68898.1
gene_biotype: protein_coding
description:
  Type II alternative RNA polymerase sigma factor, sigma-70 family protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: RS9917_01032
symbol: EAQ68900.1
gene_biotype: protein_coding
description:
  Two-component sensor histidine kinase, phosphate sensing; COG0642 Signal transduction histidine kinase.


ensembl_gene_id: RS9917_01037
symbol: EAQ68901.1
gene_biotype: protein_coding
description:
  Putative pseudouridylate synthase specific to ribosomal small subunit; COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: RS9917_01067
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: RS9917_01092
symbol: sasA
gene_biotype: protein_coding
description:
  Histidine kinase; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs.


ensembl_gene_id: RS9917_01107
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: RS9917_01112
symbol: EAQ68916.1
gene_biotype: protein_coding
description:
  Putative glucose 6-phosphate dehydrogenase effector OpcA; COG3429 Glucose-6-P dehydrogenase subunit.


ensembl_gene_id: RS9917_01137
symbol: EAQ68921.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member.


ensembl_gene_id: RS9917_01152
symbol: folD
gene_biotype: protein_coding
description:
  Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: RS9917_01222
symbol: EAQ68938.1
gene_biotype: protein_coding
description:
  Binding-protein-dependent transport systems inner membrane component; COG0395 ABC-type sugar transport system, permease component.


ensembl_gene_id: RS9917_01227
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: RS9917_01247
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: RS9917_01267
symbol: hisH
gene_biotype: protein_coding
description:
  Glutamine amidotransferase class-I; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: RS9917_01277
symbol: petG
gene_biotype: protein_coding
description:
  Cytochrome b6/f complex subunit 5; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. PetG is required for either the stability or assembly of the cytochrome b6-f complex.


ensembl_gene_id: RS9917_01287
symbol: trmJ
gene_biotype: protein_coding
description:
  Probable tRNA/rRNA methyltransferase; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.


ensembl_gene_id: RS9917_01302
symbol: EAQ68954.1
gene_biotype: protein_coding
description:
  Protoporphyrin IX Magnesium-chelatase subunit ChlI; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.


ensembl_gene_id: RS9917_01307
symbol: ruvC
gene_biotype: protein_coding
description:
  Holliday junction resolvase RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: RS9917_01312
symbol: EAQ68956.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0212 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.


ensembl_gene_id: RS9917_01342
symbol: EAQ68962.1
gene_biotype: protein_coding
description:
  ABC transporter, substrate binding protein, possibly oligopeptides; COG0747 ABC-type dipeptide transport system, periplasmic component.


ensembl_gene_id: RS9917_01347
symbol: EAQ68963.1
gene_biotype: protein_coding
description:
  Putative ABC transporter, oligopeptides; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.


ensembl_gene_id: RS9917_01387
symbol: EAQ68971.1
gene_biotype: protein_coding
description:
  ABC transporter, periplasmic substrate-binding protein, putative; COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.


ensembl_gene_id: RS9917_01432
symbol: ychF
gene_biotype: protein_coding
description:
  Hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: RS9917_01442
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: RS9917_01462
symbol: EAQ68986.1
gene_biotype: protein_coding
description:
  Putative sodium-dependent transporter, NSS family protein; COG0733 Na+-dependent transporters of the SNF family.


ensembl_gene_id: RS9917_01467
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: RS9917_01482
symbol: EAQ68990.1
gene_biotype: protein_coding
description:
  Putative nicotinamide nucleotide transhydrogenase, subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.


ensembl_gene_id: RS9917_01487
symbol: EAQ68991.1
gene_biotype: protein_coding
description:
  Putative nicotinamide nucleotide transhydrogenase, subunit alpha 2(A2); COG3288 NAD/NADP transhydrogenase alpha subunit.


ensembl_gene_id: RS9917_01492
symbol: EAQ68992.1
gene_biotype: protein_coding
description:
  Putative nicotinamide nucleotide transhydrogenase, subunit alpha 1(A1); COG3288 NAD/NADP transhydrogenase alpha subunit.


ensembl_gene_id: RS9917_01522
symbol: EAQ68998.1
gene_biotype: protein_coding
description:
  Translation initiation factor; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: RS9917_01537
symbol: EAQ69001.1
gene_biotype: protein_coding
description:
  Pseudouridine synthase, Rsu; COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: RS9917_01542
symbol: EAQ69002.1
gene_biotype: protein_coding
description:
  SAM (and some other nucleotide) binding motif:Generic methyltransferase; COG0500 SAM-dependent methyltransferases.


ensembl_gene_id: RS9917_01552
symbol: EAQ69004.1
gene_biotype: protein_coding
description:
  Putative chaperon-like protein for quinone binding in photosystem II; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.


ensembl_gene_id: RS9917_01557
symbol: petM
gene_biotype: protein_coding
description:
  Hypothetical protein; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.


ensembl_gene_id: RS9917_01577
symbol: EAQ69009.1
gene_biotype: protein_coding
description:
  Cyclophilin-type peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: RS9917_01582
symbol: ycf4
gene_biotype: protein_coding
description:
  Photosystem I assembly protein (Ycf4 family protein); Seems to be required for the assembly of the photosystem I complex; Belongs to the Ycf4 family.


ensembl_gene_id: RS9917_01587
symbol: psbD
gene_biotype: protein_coding
description:
  Photosystem II D2 protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex.


ensembl_gene_id: RS9917_01592
symbol: psbC
gene_biotype: protein_coding
description:
  Photosynthetic II protein PsbC; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light- induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation; Belongs to the PsbB/PsbC family. PsbC subfamily.


ensembl_gene_id: RS9917_01601
symbol: EAQ67989.1
gene_biotype: protein_coding
description:
  Possible Natural resistance-associated protein; COG3210 Large exoproteins involved in heme utilization or adhesion.


ensembl_gene_id: RS9917_01641
symbol: EAQ67997.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.


ensembl_gene_id: RS9917_01651
symbol: EAQ67999.1
gene_biotype: protein_coding
description:
  Possible mechanosensitive ion channel, MscS family protein; COG0668 Small-conductance mechanosensitive channel.


ensembl_gene_id: RS9917_01671
symbol: EAQ68003.1
gene_biotype: protein_coding
description:
  Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: RS9917_01691
symbol: cobQ
gene_biotype: protein_coding
description:
  Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: RS9917_01726
symbol: EAQ68014.1
gene_biotype: protein_coding
description:
  Putative proline/betaine transporter, MFS family protein; COG0477 Permeases of the major facilitator superfamily.


ensembl_gene_id: RS9917_01756
symbol: lexA
gene_biotype: protein_coding
description:
  SOS function regulatory protein, LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: RS9917_01761
symbol: EAQ68021.1
gene_biotype: protein_coding
description:
  Aspartate and ornithine carbamoyltransferase family protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: RS9917_01766
symbol: ftsH-2
gene_biotype: protein_coding
description:
  Peptidase M41, FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: RS9917_01786
symbol: EAQ68026.1
gene_biotype: protein_coding
description:
  Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: RS9917_01841
symbol: nadK
gene_biotype: protein_coding
description:
  Predicted sugar kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: RS9917_01846
symbol: pheS
gene_biotype: protein_coding
description:
  COG0016 Phenylalanyl-tRNA synthetase alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: RS9917_01851
symbol: surE
gene_biotype: protein_coding
description:
  Survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: RS9917_01871
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine monophosphate synthase (TMP); Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: RS9917_01901
symbol: EAQ68049.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides.


ensembl_gene_id: RS9917_01906
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: RS9917_01911
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: RS9917_01921
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein ERA-like protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: RS9917_01936
symbol: EAQ68056.1
gene_biotype: protein_coding
description:
  Glucose transport protein; COG0477 Permeases of the major facilitator superfamily; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: RS9917_01941
symbol: EAQ68057.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0477 Permeases of the major facilitator superfamily; Belongs to the BI1 family.


ensembl_gene_id: RS9917_01956
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: RS9917_01966
symbol: pdhA
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase (lipoamide); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: RS9917_01976
symbol: nnrE
gene_biotype: protein_coding
description:
  Uncharacterized protein family UPF0031:YjeF-related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehy [...]


ensembl_gene_id: RS9917_01981
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: RS9917_01991
symbol: lnt
gene_biotype: protein_coding
description:
  Possible apolipoprotein n-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: RS9917_02021
symbol: EAQ68073.1
gene_biotype: protein_coding
description:
  COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes.


ensembl_gene_id: RS9917_02026
symbol: EAQ68074.1
gene_biotype: protein_coding
description:
  tRNA/rRNA methyltransferase (SpoU); COG0566 rRNA methylases; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: RS9917_02036
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-glucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: RS9917_02041
symbol: argD
gene_biotype: protein_coding
description:
  COG4992 Ornithine/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: RS9917_02076
symbol: EAQ68084.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily.


ensembl_gene_id: RS9917_02081
symbol: miaB
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: RS9917_02086
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: RS9917_02101
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ:Tubulin/FtsZ family protein; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: RS9917_02106
symbol: panB
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: RS9917_02111
symbol: EAQ68091.1
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen III oxidase:Putative oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: RS9917_02121
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit 4; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: RS9917_02126
symbol: clpP-2
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit 3; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: RS9917_02131
symbol: ilvC
gene_biotype: protein_coding
description:
  Acetohydroxy acid isomeroreductase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: RS9917_02136
symbol: cobD
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: RS9917_02236
symbol: menG
gene_biotype: protein_coding
description:
  Possible menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of 2-phytyl- 1,4-beta-naphthoquinol to phylloquinol.


ensembl_gene_id: RS9917_02246
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisF (cyclase); IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: RS9917_02256
symbol: EAQ68120.1
gene_biotype: protein_coding
description:
  Chlorophyll synthase, ChlG; COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases.


ensembl_gene_id: RS9917_02266
symbol: EAQ68122.1
gene_biotype: protein_coding
description:
  Fmu, rRNA SAM-dependent methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: RS9917_02276
symbol: trmH
gene_biotype: protein_coding
description:
  Putative tRNA (guanosine-2'-O-)-methyltransferase; Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: RS9917_02286
symbol: EAQ68126.1
gene_biotype: protein_coding
description:
  Putative ABC transporter, oligopeptides; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.


ensembl_gene_id: RS9917_02371
symbol: EAQ68143.1
gene_biotype: protein_coding
description:
  Putative SMR family multidrug efflux transporter; COG2076 Membrane transporters of cations and cationic drugs.


ensembl_gene_id: RS9917_02391
symbol: EAQ68147.1
gene_biotype: protein_coding
description:
  Possible ribosomal protein S6 modification protein; COG4067 Uncharacterized protein conserved in archaea.


ensembl_gene_id: RS9917_02406
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramyl-tripeptide synthetase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: RS9917_02416
symbol: EAQ68152.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: RS9917_02421
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: RS9917_02456
symbol: queA
gene_biotype: protein_coding
description:
  Queuosine biosynthesis protein; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: RS9917_02471
symbol: EAQ68163.1
gene_biotype: protein_coding
description:
  COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes.


ensembl_gene_id: RS9917_02486
symbol: lipB
gene_biotype: protein_coding
description:
  Putative lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: RS9917_02491
symbol: hpf
gene_biotype: protein_coding
description:
  Light repressed protein A-like protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: RS9917_02496
symbol: EAQ68168.1
gene_biotype: protein_coding
description:
  Putative deoxyribose-phosphate aldolase (DeoC); Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: RS9917_02506
symbol: EAQ68170.1
gene_biotype: protein_coding
description:
  Putative multidrug efflux transporter, MFS family protein; COG0477 Permeases of the major facilitator superfamily.


ensembl_gene_id: RS9917_02516
symbol: proC
gene_biotype: protein_coding
description:
  Delta 1-pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: RS9917_02521
symbol: sepF
gene_biotype: protein_coding
description:
  Hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.


ensembl_gene_id: RS9917_02526
symbol: EAQ68174.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: RS9917_02541
symbol: der
gene_biotype: protein_coding
description:
  Putative GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: RS9917_02561
symbol: EAQ68181.1
gene_biotype: protein_coding
description:
  Putative nitrogen regulation protein NifR3 family-like protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: RS9917_02576
symbol: EAQ68184.1
gene_biotype: protein_coding
description:
  Precorrin-2 C20 Methyltransferase; COG2243 Precorrin-2 methylase; Belongs to the precorrin methyltransferase family.


ensembl_gene_id: RS9917_02586
symbol: mtnD
gene_biotype: protein_coding
description:
  Similar to methionine salvage pathway enzyme E-2/E-2; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway.


ensembl_gene_id: RS9917_02596
symbol: EAQ68188.1
gene_biotype: protein_coding
description:
  tRNA-(MS(2)IO(6)A)-hydroxylase-like; COG4445 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA.


ensembl_gene_id: RS9917_02601
symbol: aroQ
gene_biotype: protein_coding
description:
  Dehydroquinase class II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: RS9917_02661
symbol: psaE
gene_biotype: protein_coding
description:
  Photosystem I subunit IV (PsaE); Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family.


ensembl_gene_id: RS9917_02671
symbol: mtnB
gene_biotype: protein_coding
description:
  Putative sugar aldolase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). Belongs to the aldolase class II family. MtnB subfamily.


ensembl_gene_id: RS9917_02676
symbol: mtnC
gene_biotype: protein_coding
description:
  Putative enolase-phosphatase E-1; Bifunctional enzyme that catalyzes the enolization of 2,3- diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK- MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene). Belongs to the HAD-like hydrolase superfamily. MasA/MtnC family.


ensembl_gene_id: RS9917_02713
symbol: petB
gene_biotype: protein_coding
description:
  Apocytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.


ensembl_gene_id: RS9917_02718
symbol: EAQ68459.1
gene_biotype: protein_coding
description:
  PDZ domain (also known as DHR or GLGF):Tail specific protease; COG0793 Periplasmic protease; Belongs to the peptidase S41A family.


ensembl_gene_id: RS9917_02738
symbol: EAQ68463.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes.


ensembl_gene_id: RS9917_02743
symbol: minC
gene_biotype: protein_coding
description:
  Possible septum site-determining protein; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: RS9917_02748
symbol: EAQ68465.1
gene_biotype: protein_coding
description:
  Putative septum site-determining protein MinD; COG2894 Septum formation inhibitor-activating ATPase.


ensembl_gene_id: RS9917_02753
symbol: minE
gene_biotype: protein_coding
description:
  Possible septum site-determining protein MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: RS9917_02758
symbol: EAQ68467.1
gene_biotype: protein_coding
description:
  Possible transcriptional regulator, luxR family protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.


ensembl_gene_id: RS9917_02773
symbol: prmC
gene_biotype: protein_coding
description:
  SAM (and some other nucleotide) binding motif protein; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: RS9917_02793
symbol: psbM
gene_biotype: protein_coding
description:
  Possible photosystem II reaction center M protein; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface.


ensembl_gene_id: RS9917_02803
symbol: psbB
gene_biotype: protein_coding
description:
  Photosystem II chlorophyll-binding protein; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light- induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation; Belongs to the PsbB/PsbC family. PsbB subfamily.


ensembl_gene_id: RS9917_02813
symbol: nrdR
gene_biotype: protein_coding
description:
  Hypothetical protein; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: RS9917_02828
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: RS9917_02863
symbol: EAQ68488.1
gene_biotype: protein_coding
description:
  Possible phycobilisome rod-core linker polypeptide (L-RC 28.5); Belongs to the phycobilisome linker protein family.


ensembl_gene_id: RS9917_02918
symbol: EAQ68499.1
gene_biotype: protein_coding
description:
  COG0394 Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: RS9917_02923
symbol: panC/cmk
gene_biotype: protein_coding
description:
  Putative bifunctional enzyme; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. In the N-terminal section; belongs to the pantothenate synthetase family.


ensembl_gene_id: RS9917_02928
symbol: rlpA
gene_biotype: protein_coding
description:
  Possible rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: RS9917_02933
symbol: purM
gene_biotype: protein_coding
description:
  Phosphoribosyl formylglycinamidine cyclo-ligase; COG0150 Phosphoribosylaminoimidazole (AIR) synthetase.


ensembl_gene_id: RS9917_02993
symbol: hemF
gene_biotype: protein_coding
description:
  Coproporphyrinogen oxidase; Involved in the heme and chlorophyll biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX.


ensembl_gene_id: RS9917_02998
symbol: EAQ68515.1
gene_biotype: protein_coding
description:
  MRP protein-like; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: RS9917_03003
symbol: rodA
gene_biotype: protein_coding
description:
  Cell division protein possibly involved in shape determination; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: RS9917_03028
symbol: ppc
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family.


ensembl_gene_id: RS9917_03038
symbol: recF
gene_biotype: protein_coding
description:
  RecF protein; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: RS9917_03043
symbol: speH
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.


ensembl_gene_id: RS9917_03063
symbol: EAQ68528.1
gene_biotype: protein_coding
description:
  Rhodanese-like; COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2.


ensembl_gene_id: RS9917_03108
symbol: recA
gene_biotype: protein_coding
description:
  RecA bacterial DNA recombination protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: RS9917_03128
symbol: ndhN
gene_biotype: protein_coding
description:
  NADH dehydrogenase I subunit N; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.


ensembl_gene_id: RS9917_03133
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: RS9917_03143
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: RS9917_03148
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: RS9917_03153
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: RS9917_03158
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: RS9917_03163
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: RS9917_03168
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: RS9917_03183
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: RS9917_03188
symbol: rplN
gene_biotype: protein_coding
description:
  50S Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: RS9917_03193
symbol: rplX
gene_biotype: protein_coding
description:
  Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: RS9917_03198
symbol: rplE
gene_biotype: protein_coding
description:
  50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: RS9917_03203
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: RS9917_03208
symbol: rplF
gene_biotype: protein_coding
description:
  50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: RS9917_03213
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: RS9917_03218
symbol: rpsE
gene_biotype: protein_coding
description:
  Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: RS9917_03223
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: RS9917_03228
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: RS9917_03233
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: RS9917_03243
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: RS9917_03248
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: RS9917_03253
symbol: rpoA
gene_biotype: protein_coding
description:
  Bacterial RNA polymerase, alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: RS9917_03263
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: RS9917_03268
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: RS9917_03278
symbol: rpmE
gene_biotype: protein_coding
description:
  50S ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.


ensembl_gene_id: RS9917_03283
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: RS9917_03293
symbol: EAQ68574.1
gene_biotype: protein_coding
description:
  Putative Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: RS9917_03328
symbol: EAQ68581.1
gene_biotype: protein_coding
description:
  Putative RND family multidrug efflux transporter; COG0841 Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: RS9917_03348
symbol: psaB
gene_biotype: protein_coding
description:
  Photosystem I psaB; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6; Belongs to the PsaA/PsaB family.


ensembl_gene_id: RS9917_03353
symbol: psaA
gene_biotype: protein_coding
description:
  Photosystem I P700 chlorophyll a apoprotein subunit Ia (PsaA); PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6; Belongs to the PsaA/PsaB family.


ensembl_gene_id: RS9917_03368
symbol: EAQ68589.1
gene_biotype: protein_coding
description:
  Bifunctional cbiH protien and precorrin-3B C17-methyltransferase; COG2073 Cobalamin biosynthesis protein CbiG.


ensembl_gene_id: RS9917_03418
symbol: rpsL
gene_biotype: protein_coding
description:
  30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: RS9917_03423
symbol: rpsG
gene_biotype: protein_coding
description:
  Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: RS9917_03428
symbol: fusA
gene_biotype: protein_coding
description:
  Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]


ensembl_gene_id: RS9917_03433
symbol: tuf
gene_biotype: protein_coding
description:
  Elongation factor EF-Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: RS9917_03438
symbol: rpsJ
gene_biotype: protein_coding
description:
  Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: RS9917_03443
symbol: EAQ68604.1
gene_biotype: protein_coding
description:
  ATP-dependent protease, La (LON) domain; COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease.


ensembl_gene_id: RS9917_03448
symbol: EAQ68605.1
gene_biotype: protein_coding
description:
  Probable sterol-C-methyltransferase; COG0500 SAM-dependent methyltransferases; Belongs to the class I-like SAM-binding methyltransferase superfamily. gTMT family.


ensembl_gene_id: RS9917_03478
symbol: dapL
gene_biotype: protein_coding
description:
  Putative aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate.


ensembl_gene_id: RS9917_03483
symbol: clpS
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: RS9917_03498
symbol: psbA
gene_biotype: protein_coding
description:
  Photosystem II reaction centre protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors.


ensembl_gene_id: RS9917_03503
symbol: EAQ68616.1
gene_biotype: protein_coding
description:
  Alpha-acetolactate synthase; COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase].


ensembl_gene_id: RS9917_03538
symbol: EAQ68623.1
gene_biotype: protein_coding
description:
  ABC transporter binding protein, glycine betaine/proline family protein; COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components.


ensembl_gene_id: RS9917_03543
symbol: EAQ68624.1
gene_biotype: protein_coding
description:
  ABC transporter, glycine betaine/proline family, membrane component; COG4176 ABC-type proline/glycine betaine transport system, permease component.


ensembl_gene_id: RS9917_03548
symbol: EAQ68625.1
gene_biotype: protein_coding
description:
  ABC transporter, ATP binding component, glycine betaine/proline family protein; COG4175 ABC-type proline/glycine betaine transport system, ATPase component.


ensembl_gene_id: RS9917_03553
symbol: EAQ68626.1
gene_biotype: protein_coding
description:
  Putative glycine-sarcosine methyltransferase; COG0500 SAM-dependent methyltransferases; Belongs to the class I-like SAM-binding methyltransferase superfamily. Glycine N-methyltransferase family.


ensembl_gene_id: RS9917_03563
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: RS9917_03598
symbol: EAQ68635.1
gene_biotype: protein_coding
description:
  Putative p-pantothenate cysteine ligase andp-pantothenenoylcysteine decarboxylase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: RS9917_03628
symbol: EAQ68641.1
gene_biotype: protein_coding
description:
  NAD binding site:FAD-dependent pyridine nucleotide-disulphide; COG1252 NADH dehydrogenase, FAD-containing subunit.


ensembl_gene_id: RS9917_03633
symbol: pyrB
gene_biotype: protein_coding
description:
  COG0540 Aspartate carbamoyltransferase, catalytic chain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: RS9917_03638
symbol: EAQ68643.1
gene_biotype: protein_coding
description:
  Possible Methylpurine-DNA glycosylase (MPG); COG2094 3-methyladenine DNA glycosylase; Belongs to the DNA glycosylase MPG family.


ensembl_gene_id: RS9917_03643
symbol: EAQ68644.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: RS9917_03658
symbol: gatC
gene_biotype: protein_coding
description:
  glutamyl-tRNA(Gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: RS9917_03673
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: RS9917_03698
symbol: EAQ68655.1
gene_biotype: protein_coding
description:
  Possible bicarbonate transporter, ICT family protein; COG3307 Lipid A core - O-antigen ligase and related enzymes.


ensembl_gene_id: RS9917_03708
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphotransferase superclass; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: RS9917_03718
symbol: EAQ68659.1
gene_biotype: protein_coding
description:
  COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).


ensembl_gene_id: RS9917_03733
symbol: EAQ68662.1
gene_biotype: protein_coding
description:
  Thymidylate synthase complementing protein ThyX; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: RS9917_03748
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: RS9917_03753
symbol: EAQ68666.1
gene_biotype: protein_coding
description:
  Global nitrogen regulatory protein, CRP family of transcriptional regulators; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.


ensembl_gene_id: RS9917_03773
symbol: pth
gene_biotype: protein_coding
description:
  Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: RS9917_03778
symbol: tatA
gene_biotype: protein_coding
description:
  Twin-arginine translocation protein TatA/E; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: RS9917_03783
symbol: psbH
gene_biotype: protein_coding
description:
  Photosystem II 10 kDa phosphoprotein (PsbH); One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.


ensembl_gene_id: RS9917_03788
symbol: psbN
gene_biotype: protein_coding
description:
  Photosystem II reaction centre N protein (psbN); May play a role in photosystem I and II biogenesis. Belongs to the PsbN family.


ensembl_gene_id: RS9917_03798
symbol: psbI
gene_biotype: protein_coding
description:
  Hypothetical protein; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.


ensembl_gene_id: RS9917_03818
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase, large chain; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: RS9917_03828
symbol: EAQ68681.1
gene_biotype: protein_coding
description:
  CinA-like protein; COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; Belongs to the CinA family.


ensembl_gene_id: RS9917_03833
symbol: EAQ68682.1
gene_biotype: protein_coding
description:
  Putative glycosyltransferase; COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase.


ensembl_gene_id: RS9917_03838
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase (SHMT); Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: RS9917_03858
symbol: murJ
gene_biotype: protein_coding
description:
  Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: RS9917_03873
symbol: ispH
gene_biotype: protein_coding
description:
  Hydroxymethylbutenyl pyrophosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: RS9917_03888
symbol: purH
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMPcyclohydrolase; COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful).


ensembl_gene_id: RS9917_03908
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin 5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: RS9917_03913
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: RS9917_03918
symbol: psbK
gene_biotype: protein_coding
description:
  Hypothetical protein; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.


ensembl_gene_id: RS9917_03923
symbol: EAQ68700.1
gene_biotype: protein_coding
description:
  Glycosyl transferase WecB/TagA/CpsF family protein; COG1922 Teichoic acid biosynthesis proteins; Belongs to the glycosyltransferase 26 family.


ensembl_gene_id: RS9917_04093
symbol: EAQ68734.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG1191 DNA-directed RNA polymerase specialized sigma subunit; Belongs to the sigma-70 factor family.


ensembl_gene_id: RS9917_04280
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: RS9917_04300
symbol: EAQ70025.1
gene_biotype: protein_coding
description:
  Ham1-like protein; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: RS9917_04320
symbol: EAQ70029.1
gene_biotype: protein_coding
description:
  Putative glycine betaine transporter, BCCT family protein; COG1292 Choline-glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family.


ensembl_gene_id: RS9917_04340
symbol: EAQ70033.1
gene_biotype: protein_coding
description:
  Lignostilbene-alpha,beta-dioxygenase-like protein; COG3670 Lignostilbene-alpha,beta-dioxygenase and related enzymes.


ensembl_gene_id: RS9917_04370
symbol: EAQ70039.1
gene_biotype: protein_coding
description:
  Putative pleiotropic regulatory protein; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: RS9917_04385
symbol: EAQ70042.1
gene_biotype: protein_coding
description:
  Possible 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinepyrophosphokinase; COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase.


ensembl_gene_id: RS9917_04400
symbol: EAQ70045.1
gene_biotype: protein_coding
description:
  Magnesium chelatase ATPase subunit D; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.


ensembl_gene_id: RS9917_04405
symbol: EAQ70046.1
gene_biotype: protein_coding
description:
  Possible ABC transporter; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.


ensembl_gene_id: RS9917_04415
symbol: EAQ70048.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.


ensembl_gene_id: RS9917_04420
symbol: ndhJ
gene_biotype: protein_coding
description:
  NADH dehydrogenase I chain J; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.


ensembl_gene_id: RS9917_04425
symbol: ndhK
gene_biotype: protein_coding
description:
  Putative respiratory-chain NADH dehydrogenase subunit; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration; Belongs to the complex I 20 kDa subunit family.


ensembl_gene_id: RS9917_04430
symbol: ndhC
gene_biotype: protein_coding
description:
  NADH dehydrogenase alpha subunit; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.


ensembl_gene_id: RS9917_04440
symbol: EAQ70053.1
gene_biotype: protein_coding
description:
  Photosystem II stability/assembly factor-like; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity.


ensembl_gene_id: RS9917_04445
symbol: psbE
gene_biotype: protein_coding
description:
  Cytochrome b559, alpha subunit; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family.


ensembl_gene_id: RS9917_04450
symbol: psbF
gene_biotype: protein_coding
description:
  Cytochrome b559, beta subunit; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family.


ensembl_gene_id: RS9917_04455
symbol: psbL
gene_biotype: protein_coding
description:
  Photosystem II reaction center L; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface and is required for correct PSII assembly and/or dimerization.


ensembl_gene_id: RS9917_04460
symbol: psbJ
gene_biotype: protein_coding
description:
  Putative photosystem II reaction center J protein; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.


ensembl_gene_id: RS9917_04475
symbol: EAQ70060.1
gene_biotype: protein_coding
description:
  COG1004 Predicted UDP-glucose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: RS9917_04520
symbol: EAQ70069.1
gene_biotype: protein_coding
description:
  Outer membrane autotransporter barrel; COG3210 Large exoproteins involved in heme utilization or adhesion.


ensembl_gene_id: RS9917_04575
symbol: EAQ70080.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: RS9917_04580
symbol: EAQ70081.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: RS9917_04585
symbol: EAQ70082.1
gene_biotype: protein_coding
description:
  Putative dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.


ensembl_gene_id: RS9917_04590
symbol: EAQ70083.1
gene_biotype: protein_coding
description:
  dTDP-glucose-4,6-dehydratase; COG1088 dTDP-D-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: RS9917_04595
symbol: EAQ70084.1
gene_biotype: protein_coding
description:
  Putative nucleotide sugar epimerase/dehydratase; COG1086 Predicted nucleoside-diphosphate sugar epimerases.


ensembl_gene_id: RS9917_04600
symbol: EAQ70085.1
gene_biotype: protein_coding
description:
  Putative eps aminotransferase protein; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: RS9917_04610
symbol: EAQ70087.1
gene_biotype: protein_coding
description:
  Probable glycosyl transferase transmembrane protein; COG2148 Sugar transferases involved in lipopolysaccharide synthesis.


ensembl_gene_id: RS9917_04635
symbol: gmd
gene_biotype: protein_coding
description:
  GDP-D-mannose 4, 6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.


ensembl_gene_id: RS9917_04710
symbol: EAQ70107.1
gene_biotype: protein_coding
description:
  Capsular polysaccharide biosynthesis protein; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: RS9917_04715
symbol: EAQ70108.1
gene_biotype: protein_coding
description:
  Capsular polysaccharide biosynthesis protein; COG1086 Predicted nucleoside-diphosphate sugar epimerases.


ensembl_gene_id: RS9917_04720
symbol: EAQ70109.1
gene_biotype: protein_coding
description:
  ATP-binding protein of ABC transporter; COG1132 ABC-type multidrug transport system, ATPase and permease components.


ensembl_gene_id: RS9917_04820
symbol: EAQ70129.1
gene_biotype: protein_coding
description:
  COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: RS9917_04835
symbol: EAQ70132.1
gene_biotype: protein_coding
description:
  Putative polysialic acid capsule expression protein KpsF; COG0794 Predicted sugar phosphate isomerase involved in capsule formation; Belongs to the SIS family. GutQ/KpsF subfamily.


ensembl_gene_id: RS9917_04850
symbol: EAQ70135.1
gene_biotype: protein_coding
description:
  Putative 3-deoxy-manno-octulosonate cytidylyltransferase; COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; Belongs to the KdsB family.


ensembl_gene_id: RS9917_04900
symbol: EAQ70145.1
gene_biotype: protein_coding
description:
  ABC transporter transmembrane region:ATP/GTP-binding site motif protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.


ensembl_gene_id: RS9917_04925
symbol: EAQ70150.1
gene_biotype: protein_coding
description:
  Putative glycosyl transferase family protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.


ensembl_gene_id: RS9917_04985
symbol: EAQ70162.1
gene_biotype: protein_coding
description:
  Putative Na+/H+ antiporter, CPA2 family protein; COG0475 Kef-type K+ transport systems, membrane components.


ensembl_gene_id: RS9917_04995
symbol: EAQ70164.1
gene_biotype: protein_coding
description:
  Phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: RS9917_05000
symbol: ackA
gene_biotype: protein_coding
description:
  Putative acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: RS9917_05020
symbol: rnc
gene_biotype: protein_coding
description:
  Putative ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: RS9917_05035
symbol: EAQ70172.1
gene_biotype: protein_coding
description:
  Possible potassium channel, VIC family protein; COG1226 Kef-type K+ transport systems, predicted NAD-binding component.


ensembl_gene_id: RS9917_05050
symbol: EAQ70175.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG2250 Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN.


ensembl_gene_id: RS9917_05055
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: RS9917_05060
symbol: EAQ70177.1
gene_biotype: protein_coding
description:
  GDP-mannose pyrophosphorylase; COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.


ensembl_gene_id: RS9917_05065
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: RS9917_05070
symbol: psaC
gene_biotype: protein_coding
description:
  Photosystem I subunit PsaC; Apoprotein for the two 4Fe-4S centers FA and FB of photosystem I (PSI); essential for photochemical activity. FB is the terminal electron acceptor of PSI, donating electrons to ferredoxin. The C-terminus interacts with PsaA/B/D and helps assemble the protein into the PSI complex. Required for binding of PsaD and PsaE to PSI. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, [...]


ensembl_gene_id: RS9917_05080
symbol: EAQ70181.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: RS9917_05085
symbol: EAQ70182.1
gene_biotype: protein_coding
description:
  Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.


ensembl_gene_id: RS9917_05090
symbol: EAQ70183.1
gene_biotype: protein_coding
description:
  NAD dependent epimerase/dehydratase family protein; COG0451 Nucleoside-diphosphate-sugar epimerases.


ensembl_gene_id: RS9917_05095
symbol: thiC
gene_biotype: protein_coding
description:
  Thiamin biosynthesis protein; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.


ensembl_gene_id: RS9917_05120
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: RS9917_05125
symbol: smpB
gene_biotype: protein_coding
description:
  tmRNA binding protein SmpB; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switc [...]


ensembl_gene_id: RS9917_05165
symbol: EAQ70198.1
gene_biotype: protein_coding
description:
  COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.


ensembl_gene_id: RS9917_05170
symbol: EAQ70199.1
gene_biotype: protein_coding
description:
  Twin-arginine translocation pathway signal; COG1653 ABC-type sugar transport system, periplasmic component.


ensembl_gene_id: RS9917_05200
symbol: ahcY
gene_biotype: protein_coding
description:
  Putative adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: RS9917_05225
symbol: EAQ70210.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: RS9917_05240
symbol: EAQ70213.1
gene_biotype: protein_coding
description:
  Putative diaminopelargonic acid synthase; COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: RS9917_05280
symbol: crcB
gene_biotype: protein_coding
description:
  Hypothetical protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: RS9917_05295
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: RS9917_05300
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA isopentenyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: RS9917_05305
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: RS9917_05335
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: RS9917_05345
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: RS9917_05350
symbol: EAQ70235.1
gene_biotype: protein_coding
description:
  Possible photosystem II protein PsbZ (ycf9); Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna.


ensembl_gene_id: RS9917_05360
symbol: EAQ70237.1
gene_biotype: protein_coding
description:
  Putative multidrug efflux ABC transporter; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.


ensembl_gene_id: RS9917_05405
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...]


ensembl_gene_id: RS9917_05415
symbol: vapC-9
gene_biotype: protein_coding
description:
  PIN domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.


ensembl_gene_id: RS9917_05420
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: RS9917_05445
symbol: tilS
gene_biotype: protein_coding
description:
  Possible MesJ-like protein; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: RS9917_05455
symbol: rnj
gene_biotype: protein_coding
description:
  Hypothetical protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: RS9917_05460
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthetase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: RS9917_05465
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: RS9917_05470
symbol: tig
gene_biotype: protein_coding
description:
  FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase); Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: RS9917_05475
symbol: clpP-3
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: RS9917_05480
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: RS9917_05490
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase, gamma and tau subunits; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: RS9917_05520
symbol: rplT
gene_biotype: protein_coding
description:
  Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: RS9917_05535
symbol: thiG
gene_biotype: protein_coding
description:
  Thiamin biosynthesis protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: RS9917_05545
symbol: EAQ70274.1
gene_biotype: protein_coding
description:
  Sulfolipid (UDP-sulfoquinovose) biosynthesis protein; COG0451 Nucleoside-diphosphate-sugar epimerases.


ensembl_gene_id: RS9917_05580
symbol: EAQ70281.1
gene_biotype: protein_coding
description:
  Soluble hydrogenase small subunit; COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase.


ensembl_gene_id: RS9917_05635
symbol: pdxA
gene_biotype: protein_coding
description:
  Putative pyridoxal phosphate biosynthetic protein PdxA; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).


ensembl_gene_id: RS9917_05640
symbol: EAQ70293.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: RS9917_05645
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: RS9917_05655
symbol: thiL
gene_biotype: protein_coding
description:
  Putative thiamine monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: RS9917_05675
symbol: EAQ70300.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: RS9917_05680
symbol: rsgA
gene_biotype: protein_coding
description:
  GTPase EngC; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: RS9917_05685
symbol: EAQ70302.1
gene_biotype: protein_coding
description:
  COG0425 Predicted redox protein, regulator of disulfide bond formation; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: RS9917_05690
symbol: dnaJ
gene_biotype: protein_coding
description:
  DnaJ protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and Gr [...]


ensembl_gene_id: RS9917_05695
symbol: grpE
gene_biotype: protein_coding
description:
  Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- [...]


ensembl_gene_id: RS9917_05700
symbol: EAQ70305.1
gene_biotype: protein_coding
description:
  General secretion pathway protein E; COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.


ensembl_gene_id: RS9917_05720
symbol: EAQ70309.1
gene_biotype: protein_coding
description:
  Methionine sulfoxide reductase B; COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase.


ensembl_gene_id: RS9917_05725
symbol: EAQ70310.1
gene_biotype: protein_coding
description:
  Uncharacterized protein family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily.


ensembl_gene_id: RS9917_05745
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: RS9917_05750
symbol: EAQ70315.1
gene_biotype: protein_coding
description:
  Antitermination protein NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: RS9917_05765
symbol: queG
gene_biotype: protein_coding
description:
  4Fe-4S cluster binding protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family.


ensembl_gene_id: RS9917_05780
symbol: purF
gene_biotype: protein_coding
description:
  Glutamine amidotransferase class-II:Phosphoribosyl transferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: RS9917_05785
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase II; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist  [...]


ensembl_gene_id: RS9917_05795
symbol: EAQ70324.1
gene_biotype: protein_coding
description:
  DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...]


ensembl_gene_id: RS9917_05800
symbol: EAQ70325.1
gene_biotype: protein_coding
description:
  Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.


ensembl_gene_id: RS9917_05820
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: RS9917_05835
symbol: purT
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase 2; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family.


ensembl_gene_id: RS9917_05860
symbol: mraY
gene_biotype: protein_coding
description:
  Putative phospho-N-acetylmuramoyl-pentapeptide-transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: RS9917_05875
symbol: argG
gene_biotype: protein_coding
description:
  COG0137 Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.


ensembl_gene_id: RS9917_05895
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate / quinate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: RS9917_05910
symbol: EAQ70347.1
gene_biotype: protein_coding
description:
  ABC transporter, substrate binding protein, phosphate; COG0226 ABC-type phosphate transport system, periplasmic component; Belongs to the PstS family.


ensembl_gene_id: RS9917_05925
symbol: purU
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).


ensembl_gene_id: RS9917_05950
symbol: EAQ70355.1
gene_biotype: protein_coding
description:
  Phospho-2-dehydro-3-deoxyheptonate aldolase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).


ensembl_gene_id: RS9917_05975
symbol: ppk
gene_biotype: protein_coding
description:
  Putative polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: RS9917_06000
symbol: cynS
gene_biotype: protein_coding
description:
  Cyanase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.


ensembl_gene_id: RS9917_06020
symbol: EAQ70369.1
gene_biotype: protein_coding
description:
  COG0155 Sulfite reductase, beta subunit (hemoprotein); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: RS9917_06060
symbol: ureB
gene_biotype: protein_coding
description:
  Urease beta subunit; COG0832 Urea amidohydrolase (urease) beta subunit; Belongs to the urease beta subunit family.


ensembl_gene_id: RS9917_06065
symbol: ureA
gene_biotype: protein_coding
description:
  Urease, gamma subunit; COG0831 Urea amidohydrolase (urease) gamma subunit; Belongs to the urease gamma subunit family.


ensembl_gene_id: RS9917_06070
symbol: ureD
gene_biotype: protein_coding
description:
  Urease accessory protein D; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.


ensembl_gene_id: RS9917_06075
symbol: ureE
gene_biotype: protein_coding
description:
  Urease accessory protein UreE; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.


ensembl_gene_id: RS9917_06080
symbol: ureF
gene_biotype: protein_coding
description:
  Urease accessory protein ureF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.


ensembl_gene_id: RS9917_06085
symbol: ureG
gene_biotype: protein_coding
description:
  Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.


ensembl_gene_id: RS9917_06090
symbol: EAQ70383.1
gene_biotype: protein_coding
description:
  Putative urea ABC transporter, urea binding protein; COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.


ensembl_gene_id: RS9917_06095
symbol: EAQ70384.1
gene_biotype: protein_coding
description:
  Putative urea ABC transporter; COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: RS9917_06100
symbol: EAQ70385.1
gene_biotype: protein_coding
description:
  Putative membrane protein of ABC transport system; COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: RS9917_06105
symbol: EAQ70386.1
gene_biotype: protein_coding
description:
  Putative ATP-binding subunit of urea ABC transport system; COG4674 Uncharacterized ABC-type transport system, ATPase component.


ensembl_gene_id: RS9917_06110
symbol: EAQ70387.1
gene_biotype: protein_coding
description:
  Putative ATP-binding subunit of urea ABC transport system; COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.


ensembl_gene_id: RS9917_06125
symbol: EAQ70390.1
gene_biotype: protein_coding
description:
  Aminotransferases class-IV; COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase.


ensembl_gene_id: RS9917_06135
symbol: queC
gene_biotype: protein_coding
description:
  ExsB; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.


ensembl_gene_id: RS9917_06150
symbol: queE
gene_biotype: protein_coding
description:
  Possible organic radical activating enzyme; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: RS9917_06155
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: RS9917_06160
symbol: EAQ70397.1
gene_biotype: protein_coding
description:
  DpsA; COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); Belongs to the Dps family.


ensembl_gene_id: RS9917_06165
symbol: EAQ70398.1
gene_biotype: protein_coding
description:
  Putative type II alternative RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: RS9917_06170
symbol: aspS
gene_biotype: protein_coding
description:
  Aspartyl-tRNA synthetase:GAD domain:tRNA synthetases, class I; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: RS9917_06175
symbol: gcvT
gene_biotype: protein_coding
description:
  Putative Glycine cleavage T-protein (aminomethyl transferase); The glycine cleavage system catalyzes the degradation of glycine.


ensembl_gene_id: RS9917_06185
symbol: EAQ70402.1
gene_biotype: protein_coding
description:
  Cyclic nucleotide-binding domain (cNMP-BD) protein; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.


ensembl_gene_id: RS9917_06190
symbol: EAQ70403.1
gene_biotype: protein_coding
description:
  Agmatinase, putative; COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family.


ensembl_gene_id: RS9917_06195
symbol: speE
gene_biotype: protein_coding
description:
  Putative spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: RS9917_06225
symbol: EAQ70410.1
gene_biotype: protein_coding
description:
  Putative ferric uptake regulator, FUR family protein; COG0735 Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family.


ensembl_gene_id: RS9917_06230
symbol: EAQ70411.1
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase/reductase (SDR) superfamily protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).


ensembl_gene_id: RS9917_06260
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: RS9917_06270
symbol: EAQ70419.1
gene_biotype: protein_coding
description:
  Small mechanosensitive ion channel, MscS family protein; COG0668 Small-conductance mechanosensitive channel.


ensembl_gene_id: RS9917_06290
symbol: ligA
gene_biotype: protein_coding
description:
  BRCT domain:NAD-dependent DNA ligase N-terminus; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: RS9917_06335
symbol: mnmG
gene_biotype: protein_coding
description:
  Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: RS9917_06350
symbol: EAQ70435.1
gene_biotype: protein_coding
description:
  DnaB helicase:RecA bacterial DNA recombination protein; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: RS9917_06375
symbol: EAQ70440.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance.


ensembl_gene_id: RS9917_06380
symbol: gcvH
gene_biotype: protein_coding
description:
  Putative Glycine cleavage H-protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: RS9917_06385
symbol: gcvP
gene_biotype: protein_coding
description:
  Glycine cleavage system P-protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.


ensembl_gene_id: RS9917_06425
symbol: EAQ70450.1
gene_biotype: protein_coding
description:
  Conserved hypothetical putative integral membrane protein; COG1914 Mn2+ and Fe2+ transporters of the NRAMP family.


ensembl_gene_id: RS9917_06430
symbol: EAQ70451.1
gene_biotype: protein_coding
description:
  COG0071 Molecular chaperone (small heat shock protein); Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: RS9917_06455
symbol: alaS
gene_biotype: protein_coding
description:
  Alanyl-tRNA synthetase:DHHA1 domain; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: RS9917_06470
symbol: EAQ70459.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, Crp/Fnr family protein; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.


ensembl_gene_id: RS9917_06480
symbol: EAQ70461.1
gene_biotype: protein_coding
description:
  Filamentous haemagglutinin-like; COG3210 Large exoproteins involved in heme utilization or adhesion.


ensembl_gene_id: RS9917_06510
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: RS9917_06520
symbol: gatB
gene_biotype: protein_coding
description:
  glutamyl-tRNA (Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: RS9917_06540
symbol: coaE
gene_biotype: protein_coding
description:
  Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: RS9917_06545
symbol: argJ
gene_biotype: protein_coding
description:
  ArgJ family protein; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: RS9917_06575
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: RS9917_06580
symbol: EAQ70481.1
gene_biotype: protein_coding
description:
  Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein; COG0346 Lactoylglutathione lyase and related lyases.


ensembl_gene_id: RS9917_06585
symbol: EAQ70482.1
gene_biotype: protein_coding
description:
  Putative ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB; COG0542 ATPases with chaperone activity, ATP-binding subunit; Belongs to the ClpA/ClpB family.


ensembl_gene_id: RS9917_06590
symbol: secE
gene_biotype: protein_coding
description:
  SecE subunit of protein translocation complex; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: RS9917_06595
symbol: nusG
gene_biotype: protein_coding
description:
  NusG antitermination factor; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: RS9917_06600
symbol: rplK
gene_biotype: protein_coding
description:
  Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: RS9917_06605
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: RS9917_06610
symbol: rplJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: RS9917_06615
symbol: rplL
gene_biotype: protein_coding
description:
  Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: RS9917_06630
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: RS9917_06645
symbol: EAQ70494.1
gene_biotype: protein_coding
description:
  Possible general (type II) secretion pathway protein D precursor; COG1450 Type II secretory pathway, component PulD.


ensembl_gene_id: RS9917_06665
symbol: EAQ70498.1
gene_biotype: protein_coding
description:
  Aminotransferases class-I; COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase.


ensembl_gene_id: RS9917_06705
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: RS9917_06710
symbol: EAQ70507.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG1350 Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB).


ensembl_gene_id: RS9917_06730
symbol: EAQ70511.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: RS9917_06735
symbol: EAQ70512.1
gene_biotype: protein_coding
description:
  Pseudouridine synthase, RluD; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: RS9917_06740
symbol: EAQ70513.1
gene_biotype: protein_coding
description:
  Glutamine ABC transporter, periplasmic glutamine-binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.


ensembl_gene_id: RS9917_06755
symbol: EAQ70516.1
gene_biotype: protein_coding
description:
  ABC transporter, ATP binding component, possibly for oligopeptides; COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase.


ensembl_gene_id: RS9917_06760
symbol: EAQ70517.1
gene_biotype: protein_coding
description:
  Guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: RS9917_06795
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: RS9917_06805
symbol: EAQ70526.1
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide pyrophosphorylase:Quinolinate phosphoriobsyltransferase; COG0157 Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family.


ensembl_gene_id: RS9917_06855
symbol: ybeY
gene_biotype: protein_coding
description:
  Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: RS9917_06865
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: RS9917_06870
symbol: EAQ70539.1
gene_biotype: protein_coding
description:
  Glutaredoxin; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.


ensembl_gene_id: RS9917_06875
symbol: gshB
gene_biotype: protein_coding
description:
  Putative glutathione synthetase; COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); Belongs to the prokaryotic GSH synthase family.


ensembl_gene_id: RS9917_06885
symbol: menA
gene_biotype: protein_coding
description:
  1,4-dihydroxy-2-naphthoate (DHNA) octaprenyltransferase; Involved in the synthesis of phylloquinone (vitamin K1). Catalyzes the transfer of a prenyl chain to 2-carboxy-1,4- naphthoquinone; Belongs to the MenA family. Type 2 subfamily.


ensembl_gene_id: RS9917_06890
symbol: EAQ70543.1
gene_biotype: protein_coding
description:
  Putative O-succinylbenzoate synthase; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family.


ensembl_gene_id: RS9917_06895
symbol: EAQ70544.1
gene_biotype: protein_coding
description:
  Probable O-succinylbenzoic acid--CoA ligase (OSB-CoA synthetase); COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.


ensembl_gene_id: RS9917_06905
symbol: EAQ70546.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the hydrolysis of 1,4-dihydroxy-2-naphthoyl-CoA (DHNA-CoA) to 1,4-dihydroxy-2-naphthoate (DHNA), a reaction involved in phylloquinone (vitamin K1) biosynthesis; Belongs to the 4-hydroxybenzoyl-CoA thioesterase family. DHNA-CoA hydrolase subfamily.


ensembl_gene_id: RS9917_06910
symbol: ndhH
gene_biotype: protein_coding
description:
  NADH dehydrogenase (ubiquinone); NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.


ensembl_gene_id: RS9917_06915
symbol: rsmH
gene_biotype: protein_coding
description:
  Methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: RS9917_06935
symbol: EAQ70552.1
gene_biotype: protein_coding
description:
  NifS-like aminotransferase class-V; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.


ensembl_gene_id: RS9917_06955
symbol: EAQ70556.1
gene_biotype: protein_coding
description:
  Possible magnesium protoprophyrin IX methyltransferase; COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase.


ensembl_gene_id: RS9917_06960
symbol: EAQ70557.1
gene_biotype: protein_coding
description:
  Putative N-acetyl-glucosamine-6-phosphate deacetylase; COG1820 N-acetylglucosamine-6-phosphate deacetylase.


ensembl_gene_id: RS9917_06965
symbol: purE
gene_biotype: protein_coding
description:
  1-(5-Phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR)carboxylase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: RS9917_06985
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase, beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: RS9917_06990
symbol: hrcA
gene_biotype: protein_coding
description:
  Negative regulator of class I heat shock protein; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: RS9917_07015
symbol: ndhA
gene_biotype: protein_coding
description:
  Putative respiratory-chain NADH dehydrogenase subunit; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: RS9917_07020
symbol: ndhI
gene_biotype: protein_coding
description:
  NADH dehydrogenase I chain I (or NdhI); NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient; Belongs to the complex I 23 kDa subunit family.


ensembl_gene_id: RS9917_07025
symbol: EAQ70570.1
gene_biotype: protein_coding
description:
  Putative NADH Dehydrogenase (complex I) subunit (chain 6); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I subunit 6 family.


ensembl_gene_id: RS9917_07030
symbol: ndhE
gene_biotype: protein_coding
description:
  Putative NADH Dehydrogenase subunit; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.


ensembl_gene_id: RS9917_07035
symbol: nadK-2
gene_biotype: protein_coding
description:
  NAD(+) kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: RS9917_07055
symbol: EAQ70576.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0685 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: RS9917_07060
symbol: cugP
gene_biotype: protein_coding
description:
  Putative sugar-phosphate nucleotidyl transferase; Catalyzes the formation of UDP-glucose, from UTP and glucose 1-phosphate.


ensembl_gene_id: RS9917_07065
symbol: EAQ70578.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: RS9917_07070
symbol: ndhD
gene_biotype: protein_coding
description:
  Putative NADH dehydrogenase (complex I) subunit (chain 4); NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4 family.


ensembl_gene_id: RS9917_07075
symbol: EAQ70580.1
gene_biotype: protein_coding
description:
  COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit.


ensembl_gene_id: RS9917_07095
symbol: ndhM
gene_biotype: protein_coding
description:
  Hypothetical protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.


ensembl_gene_id: RS9917_07125
symbol: EAQ70590.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone.


ensembl_gene_id: RS9917_07155
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: RS9917_07160
symbol: plsX
gene_biotype: protein_coding
description:
  Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: RS9917_07170
symbol: radA
gene_biotype: protein_coding
description:
  Putative DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: RS9917_07175
symbol: ycf3
gene_biotype: protein_coding
description:
  TPR repeat protein; Seems to be required for the assembly of the photosystem I complex; Belongs to the Ycf3 family.


ensembl_gene_id: RS9917_07185
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: RS9917_07270
symbol: EAQ68228.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family.


ensembl_gene_id: RS9917_07280
symbol: EAQ68230.1
gene_biotype: protein_coding
description:
  Putative Na+/H+ antiporter, CPA1 family protein; COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain.


ensembl_gene_id: RS9917_07310
symbol: EAQ68236.1
gene_biotype: protein_coding
description:
  Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.


ensembl_gene_id: RS9917_07325
symbol: EAQ68239.1
gene_biotype: protein_coding
description:
  Uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: RS9917_07340
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: RS9917_07365
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: RS9917_07410
symbol: rimO
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: RS9917_07425
symbol: psbU
gene_biotype: protein_coding
description:
  Photosystem II extrinsic protein (psbU); Stabilizes the structure of photosystem II oxygen-evolving complex (OEC), the ion environment of oxygen evolution and protects the OEC against heat-induced inactivation.


ensembl_gene_id: RS9917_07435
symbol: uppP
gene_biotype: protein_coding
description:
  Bacitracin resistance protein BacA; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: RS9917_07450
symbol: EAQ68264.1
gene_biotype: protein_coding
description:
  Inositol monophosphate family protein; COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family.


ensembl_gene_id: RS9917_07470
symbol: EAQ68268.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: RS9917_07475
symbol: xseA
gene_biotype: protein_coding
description:
  Exonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: RS9917_07545
symbol: anmK
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.


ensembl_gene_id: RS9917_07550
symbol: EAQ68284.1
gene_biotype: protein_coding
description:
  Putative potassium channel, VIC family protein; COG0569 K+ transport systems, NAD-binding component.


ensembl_gene_id: RS9917_07555
symbol: EAQ68285.1
gene_biotype: protein_coding
description:
  Possible sodium transporter, Trk family protein; COG0168 Trk-type K+ transport systems, membrane components.


ensembl_gene_id: RS9917_07560
symbol: EAQ68286.1
gene_biotype: protein_coding
description:
  Putative sodium/sulfate transporter, DASS family protein; COG0471 Di- and tricarboxylate transporters.


ensembl_gene_id: RS9917_07565
symbol: hflX
gene_biotype: protein_coding
description:
  Putative GTP-binding protein, transport associated; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.


ensembl_gene_id: RS9917_07570
symbol: EAQ68288.1
gene_biotype: protein_coding
description:
  Putative NADH dehydrogenase, transport associated; COG1252 NADH dehydrogenase, FAD-containing subunit.


ensembl_gene_id: RS9917_07575
symbol: EAQ68289.1
gene_biotype: protein_coding
description:
  Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.


ensembl_gene_id: RS9917_07590
symbol: EAQ68292.1
gene_biotype: protein_coding
description:
  Putative 4'-phosphopantetheinyl transferase; COG2091 Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.


ensembl_gene_id: RS9917_07605
symbol: EAQ68295.1
gene_biotype: protein_coding
description:
  Putative ATPase, AAA family protein; COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase.


ensembl_gene_id: RS9917_07650
symbol: EAQ68304.1
gene_biotype: protein_coding
description:
  Putative two-component sensor histidine kinase protein; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.


ensembl_gene_id: RS9917_07655
symbol: EAQ68305.1
gene_biotype: protein_coding
description:
  Probable two-component response regulator transcription protein; COG3279 Response regulator of the LytR/AlgR family.


ensembl_gene_id: RS9917_07710
symbol: EAQ68316.1
gene_biotype: protein_coding
description:
  Phycobilisome rod-core linker polypeptide cpcG (L-RC 28.5); Belongs to the phycobilisome linker protein family.


ensembl_gene_id: RS9917_07735
symbol: EAQ68321.1
gene_biotype: protein_coding
description:
  Ferredoxin thioredoxin reductase, catalytic beta chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin.


ensembl_gene_id: RS9917_07740
symbol: EAQ68322.1
gene_biotype: protein_coding
description:
  FeS assembly protein SufB; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.


ensembl_gene_id: RS9917_07745
symbol: EAQ68323.1
gene_biotype: protein_coding
description:
  ABC transporter, ATP-binding component; COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component.


ensembl_gene_id: RS9917_07750
symbol: EAQ68324.1
gene_biotype: protein_coding
description:
  ABC transporter, membrane component; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.


ensembl_gene_id: RS9917_07755
symbol: EAQ68325.1
gene_biotype: protein_coding
description:
  Cysteine desulfurases, SufS subfamily protein; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.


ensembl_gene_id: RS9917_07765
symbol: mtnA
gene_biotype: protein_coding
description:
  Initiation factor 2 subunit family protein; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: RS9917_07770
symbol: EAQ68328.1
gene_biotype: protein_coding
description:
  Putative L-fuculose phosphate aldolase protein; COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases.


ensembl_gene_id: RS9917_07780
symbol: def
gene_biotype: protein_coding
description:
  Putative formylmethionine deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: RS9917_07805
symbol: EAQ68335.1
gene_biotype: protein_coding
description:
  HIT (histidine triad) family protein; COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases.


ensembl_gene_id: RS9917_07810
symbol: EAQ68336.1
gene_biotype: protein_coding
description:
  ABC transporter, ATP binding protein; COG4178 ABC-type uncharacterized transport system, permease and ATPase components.


ensembl_gene_id: RS9917_07835
symbol: psbX
gene_biotype: protein_coding
description:
  Photosystem II PsbX protein; Involved in the binding and/or turnover of quinones at the Q(B) site of Photosystem II.


ensembl_gene_id: RS9917_07840
symbol: EAQ68342.1
gene_biotype: protein_coding
description:
  YGGT family, conserved hypothetical integral membrane protein; COG0762 Predicted integral membrane protein.


ensembl_gene_id: RS9917_07845
symbol: EAQ68343.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: RS9917_07855
symbol: msrB
gene_biotype: protein_coding
description:
  COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; Belongs to the MsrB Met sulfoxide reductase family.


ensembl_gene_id: RS9917_07865
symbol: smc
gene_biotype: protein_coding
description:
  Putative chromosome segregation protein, SMC ATPase superfamily protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: RS9917_07885
symbol: EAQ68351.1
gene_biotype: protein_coding
description:
  Putative RNA methylase family protein; COG0116 Predicted N6-adenine-specific DNA methylase; Belongs to the methyltransferase superfamily.


ensembl_gene_id: RS9917_07950
symbol: mutS2
gene_biotype: protein_coding
description:
  MutS 2 protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: RS9917_07955
symbol: EAQ68365.1
gene_biotype: protein_coding
description:
  Possible ABC transporter ATP-binding protein; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.


ensembl_gene_id: RS9917_07960
symbol: obg
gene_biotype: protein_coding
description:
  GTP1/OBG family:Hemolysin-type calcium-binding region; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: RS9917_07985
symbol: EAQ68371.1
gene_biotype: protein_coding
description:
  Putative ABC transporter, ATP binding protein; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.


ensembl_gene_id: RS9917_08000
symbol: EAQ68374.1
gene_biotype: protein_coding
description:
  Putative aspartoacylase; COG2988 Succinylglutamate desuccinylase; Belongs to the AspA/AstE family. Aspartoacylase subfamily.


ensembl_gene_id: RS9917_08040
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: RS9917_08055
symbol: rimP
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: RS9917_08085
symbol: EAQ68391.1
gene_biotype: protein_coding
description:
  Possible ABC transporter, solute binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.


ensembl_gene_id: RS9917_08095
symbol: rpiA
gene_biotype: protein_coding
description:
  Ribose 5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.


ensembl_gene_id: RS9917_08100
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: RS9917_08115
symbol: rpoB
gene_biotype: protein_coding
description:
  RNA polymerases beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: RS9917_08120
symbol: rpoC1
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: RS9917_08125
symbol: rpoC2
gene_biotype: protein_coding
description:
  RNA polymerase beta prime subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the RNA polymerase beta' chain family. RpoC2 subfamily.


ensembl_gene_id: RS9917_08135
symbol: rlmN
gene_biotype: protein_coding
description:
  Hypothetical protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: RS9917_08140
symbol: EAQ68402.1
gene_biotype: protein_coding
description:
  Integral membrane signal transducer protein; COG0477 Permeases of the major facilitator superfamily.


ensembl_gene_id: RS9917_08175
symbol: rsmG
gene_biotype: protein_coding
description:
  Putative glucose inhibited division protein B; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: RS9917_08200
symbol: bioD
gene_biotype: protein_coding
description:
  Putative Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: RS9917_08215
symbol: EAQ68417.1
gene_biotype: protein_coding
description:
  Putative 8-amino-7-oxononanoate synthase; COG0156 7-keto-8-aminopelargonate synthetase and related enzymes.


ensembl_gene_id: RS9917_08230
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarate lyase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: RS9917_08240
symbol: EAQ68422.1
gene_biotype: protein_coding
description:
  Fumarate lyase:Adenylosuccinate lyase; COG0015 Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.


ensembl_gene_id: RS9917_08290
symbol: queF
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.


ensembl_gene_id: RS9917_08295
symbol: ccsB
gene_biotype: protein_coding
description:
  Putative c-type cytochrome biogenesis protein; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment.


ensembl_gene_id: RS9917_08310
symbol: EAQ68436.1
gene_biotype: protein_coding
description:
  Linker polypeptide, allophycocyanin-associated; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.


ensembl_gene_id: RS9917_08340
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: RS9917_08345
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: RS9917_08350
symbol: atpG
gene_biotype: protein_coding
description:
  Putative ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). The b'-subunit is a diverged and duplicated form of b found in plants and photosynthetic bacteria. Belongs to the ATPase B chain family.


ensembl_gene_id: RS9917_08355
symbol: atpF
gene_biotype: protein_coding
description:
  Putative ATP synthase B chain; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: RS9917_08360
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: RS9917_08365
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: RS9917_08370
symbol: atpG-2
gene_biotype: protein_coding
description:
  ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: RS9917_08395
symbol: nadE
gene_biotype: protein_coding
description:
  Carbon-nitrogen hydrolase:NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: RS9917_08400
symbol: EAQ68454.1
gene_biotype: protein_coding
description:
  Putative nicotinate-nucleotide adenylyltransferase; COG1057 Nicotinic acid mononucleotide adenylyltransferase; Belongs to the NadD family.


ensembl_gene_id: RS9917_08451
symbol: EAQ69450.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Probably a ribosomal protein or a ribosome-associated protein; Belongs to the chloroplast-specific ribosomal protein cS23 family.


ensembl_gene_id: RS9917_08456
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase, Epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: RS9917_08461
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: RS9917_08466
symbol: groS
gene_biotype: protein_coding
description:
  Co-chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: RS9917_08471
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: RS9917_08476
symbol: EAQ69455.1
gene_biotype: protein_coding
description:
  Preprotein translocase SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: RS9917_08481
symbol: gpmI
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase, co-factor-independent (iPGM); Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: RS9917_08486
symbol: pyrR
gene_biotype: protein_coding
description:
  Phosphoribosyl transferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.


ensembl_gene_id: RS9917_08501
symbol: EAQ69460.1
gene_biotype: protein_coding
description:
  Putative DnaK-type molecular chaperone (HSP70 family protein); COG0443 Molecular chaperone; Belongs to the heat shock protein 70 family.


ensembl_gene_id: RS9917_08511
symbol: rpoZ
gene_biotype: protein_coding
description:
  Putative DNA-directed RNA polymerase (omega chain); Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: RS9917_08536
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: RS9917_08551
symbol: EAQ69470.1
gene_biotype: protein_coding
description:
  Putative D-3-phosphoglycerate dehydrogenase (PGDH); COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: RS9917_08556
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: RS9917_08571
symbol: psbV
gene_biotype: protein_coding
description:
  Cytochrome c-550; Low-potential cytochrome c that plays a role in the oxygen- evolving complex of photosystem II.


ensembl_gene_id: RS9917_08576
symbol: rnz
gene_biotype: protein_coding
description:
  Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.


ensembl_gene_id: RS9917_08586
symbol: EAQ69477.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase.


ensembl_gene_id: RS9917_08596
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: RS9917_08616
symbol: rplU
gene_biotype: protein_coding
description:
  Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: RS9917_08621
symbol: EAQ69484.1
gene_biotype: protein_coding
description:
  Possible circadian clock protein KaiA; Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of kaiC. In contrast, the presence of kaiB in the complex decreases the phosphorylation status of kaiC, suggesting that kaiB acts by antagonizing the interaction between kaiA and kaiC. A kaiA dimer is sufficient to enhanc [...]


ensembl_gene_id: RS9917_08626
symbol: kaiB
gene_biotype: protein_coding
description:
  Possible circadian oscillation regulator KaiB; Component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The KaiABC complex may act as a promoter-non-specific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it decreases the phosphorylation status of KaiC. It has no effect on KaiC by itself, but instead needs the presence of both KaiA and KaiC, suggesting that it acts by antagonizing the interaction between KaiA and KaiC; Belongs to the KaiB family.


ensembl_gene_id: RS9917_08631
symbol: kaiC
gene_biotype: protein_coding
description:
  Possible circadian clock protein KaiC; Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction; Belongs to the KaiC family.


ensembl_gene_id: RS9917_08641
symbol: purD
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide synthetase; COG0151 Phosphoribosylamine-glycine ligase; Belongs to the GARS family.


ensembl_gene_id: RS9917_08651
symbol: purC
gene_biotype: protein_coding
description:
  SAICAR synthetase; COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; Belongs to the SAICAR synthetase family.


ensembl_gene_id: RS9917_08656
symbol: EAQ69491.1
gene_biotype: protein_coding
description:
  Chloroplast outer envelope membrane protein-like; COG4775 Outer membrane protein/protective antigen OMA87.


ensembl_gene_id: RS9917_08661
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-0-acyl N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: RS9917_08666
symbol: fabZ
gene_biotype: protein_coding
description:
  Putative (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: RS9917_08671
symbol: EAQ69494.1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: RS9917_08676
symbol: EAQ69495.1
gene_biotype: protein_coding
description:
  Lipid-A-disaccharide synthetase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: RS9917_08681
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: RS9917_08696
symbol: pepA
gene_biotype: protein_coding
description:
  Cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: RS9917_08721
symbol: tyrS
gene_biotype: protein_coding
description:
  t-RNA synthetase, class Ib:Tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.


ensembl_gene_id: RS9917_08726
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: RS9917_08731
symbol: plsY
gene_biotype: protein_coding
description:
  Conserved hypothetical membrane protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: RS9917_08746
symbol: EAQ69509.1
gene_biotype: protein_coding
description:
  Possible transporter, membrane component; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component; Belongs to the MlaE permease family.


ensembl_gene_id: RS9917_08761
symbol: EAQ69512.1
gene_biotype: protein_coding
description:
  COG1052 Lactate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: RS9917_08771
symbol: EAQ69514.1
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase-like; COG0008 Glutamyl- and glutaminyl-tRNA synthetases; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: RS9917_08776
symbol: EAQ69515.1
gene_biotype: protein_coding
description:
  DNA binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: RS9917_08786
symbol: EAQ69517.1
gene_biotype: protein_coding
description:
  Putative isoamylase; COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: RS9917_08811
symbol: rsmI
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: RS9917_08821
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: RS9917_08826
symbol: rpsN
gene_biotype: protein_coding
description:
  30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.


ensembl_gene_id: RS9917_08836
symbol: serS
gene_biotype: protein_coding
description:
  Putative seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: RS9917_08866
symbol: EAQ69533.1
gene_biotype: protein_coding
description:
  Bacterial ribonuclease P protein component of ribozyme; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: RS9917_08876
symbol: EAQ69535.1
gene_biotype: protein_coding
description:
  Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis.


ensembl_gene_id: RS9917_08886
symbol: EAQ69537.1
gene_biotype: protein_coding
description:
  Putative SMR family transporter, possible pecM-like protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.


ensembl_gene_id: RS9917_08901
symbol: EAQ69540.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG5512 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives.


ensembl_gene_id: RS9917_08906
symbol: EAQ69541.1
gene_biotype: protein_coding
description:
  Chloroplast membrane-associated 30 kD protein-like; COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription.


ensembl_gene_id: RS9917_08936
symbol: EAQ69547.1
gene_biotype: protein_coding
description:
  Possible ABC transporter, ATP binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.


ensembl_gene_id: RS9917_08941
symbol: ndhB
gene_biotype: protein_coding
description:
  Putative NADH dehydrogenase (complex I) subunit (chain 2); NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.


ensembl_gene_id: RS9917_08946
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: RS9917_08971
symbol: EAQ69554.1
gene_biotype: protein_coding
description:
  Aldo/keto reductase family:4Fe-4S ferredoxin, iron-sulfur binding protein; COG1453 Predicted oxidoreductases of the aldo/keto reductase family.


ensembl_gene_id: RS9917_09001
symbol: EAQ69560.1
gene_biotype: protein_coding
description:
  Cytochrome-c oxidase; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.


ensembl_gene_id: RS9917_09006
symbol: EAQ69561.1
gene_biotype: protein_coding
description:
  Possible cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).


ensembl_gene_id: RS9917_09016
symbol: ctaB
gene_biotype: protein_coding
description:
  Putative protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.


ensembl_gene_id: RS9917_09021
symbol: EAQ69564.1
gene_biotype: protein_coding
description:
  Putative multidrug efflux ABC transporter; COG1131 ABC-type multidrug transport system, ATPase component.


ensembl_gene_id: RS9917_09026
symbol: EAQ69565.1
gene_biotype: protein_coding
description:
  Putative multidrug efflux ABC transporter; COG0842 ABC-type multidrug transport system, permease component.


ensembl_gene_id: RS9917_09036
symbol: EAQ69567.1
gene_biotype: protein_coding
description:
  Proteins binding FMN and related compounds core region; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).


ensembl_gene_id: RS9917_09046
symbol: groL-2
gene_biotype: protein_coding
description:
  60 kD chaperonin 2, GroEL-like protein 2; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: RS9917_09056
symbol: EAQ69571.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: RS9917_09061
symbol: EAQ69572.1
gene_biotype: protein_coding
description:
  Putative potassium channel, VIC family protein; COG1226 Kef-type K+ transport systems, predicted NAD-binding component.


ensembl_gene_id: RS9917_09071
symbol: ispD
gene_biotype: protein_coding
description:
  Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: RS9917_09081
symbol: plqA
gene_biotype: protein_coding
description:
  Probable 4-hydroxybenzoate-octaprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of plastoquinone-9 (PQ-9) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 4-hydroxy-3-solanesylbenzoate. Belongs to the UbiA prenyltransferase family.


ensembl_gene_id: RS9917_09101
symbol: lgt
gene_biotype: protein_coding
description:
  Putative prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: RS9917_09106
symbol: petA
gene_biotype: protein_coding
description:
  Apocytochrome f; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.


ensembl_gene_id: RS9917_09111
symbol: petC
gene_biotype: protein_coding
description:
  Twin-arginine translocation pathway signal; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.


ensembl_gene_id: RS9917_09121
symbol: tatC
gene_biotype: protein_coding
description:
  Protein secretion component, Tat family protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.


ensembl_gene_id: RS9917_09126
symbol: EAQ69585.1
gene_biotype: protein_coding
description:
  Possible secreted protein MPB70 precursor; COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP.


ensembl_gene_id: RS9917_09136
symbol: psaJ
gene_biotype: protein_coding
description:
  Photosystem I reaction centre subunit IX (PsaJ); May help in the organization of the PsaE and PsaF subunits. Belongs to the PsaJ family.


ensembl_gene_id: RS9917_09141
symbol: EAQ69588.1
gene_biotype: protein_coding
description:
  Photosystem I reaction center subunit III (PsaF); COG1217 Predicted membrane GTPase involved in stress response.


ensembl_gene_id: RS9917_09146
symbol: tsaD
gene_biotype: protein_coding
description:
  Probable o-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: RS9917_09161
symbol: EAQ69592.1
gene_biotype: protein_coding
description:
  COG0381 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: RS9917_09176
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: RS9917_09191
symbol: rplS
gene_biotype: protein_coding
description:
  Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: RS9917_09201
symbol: map
gene_biotype: protein_coding
description:
  Peptidase M24A, methionine aminopeptidase, subfamily 1; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: RS9917_09221
symbol: EAQ69604.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake.


ensembl_gene_id: RS9917_09291
symbol: EAQ69618.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.


ensembl_gene_id: RS9917_09316
symbol: EAQ69623.1
gene_biotype: protein_coding
description:
  Putative iron ABC transporter, substrate binding protein; COG1840 ABC-type Fe3+ transport system, periplasmic component.


ensembl_gene_id: RS9917_09341
symbol: EAQ69628.1
gene_biotype: protein_coding
description:
  Putative histone deacetylase/AcuC/AphA family protein; COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein.


ensembl_gene_id: RS9917_09356
symbol: EAQ69631.1
gene_biotype: protein_coding
description:
  Thermostable carboxypeptidase 1; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.


ensembl_gene_id: RS9917_09406
symbol: EAQ69641.1
gene_biotype: protein_coding
description:
  GCN5-related N-acetyltransferase; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.


ensembl_gene_id: RS9917_09546
symbol: EAQ69669.1
gene_biotype: protein_coding
description:
  Protochlorophyllide reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).


ensembl_gene_id: RS9917_09556
symbol: EAQ69671.1
gene_biotype: protein_coding
description:
  Possible large-conductance mechanosensitive channel mscL; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell; Belongs to the MscL family.


ensembl_gene_id: RS9917_09711
symbol: hemC
gene_biotype: protein_coding
description:
  Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: RS9917_09721
symbol: sigA
gene_biotype: protein_coding
description:
  Sigma-70 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: RS9917_09726
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N' (replication factor Y); Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: RS9917_09736
symbol: argB
gene_biotype: protein_coding
description:
  Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: RS9917_09771
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: RS9917_09776
symbol: psb27
gene_biotype: protein_coding
description:
  Possible photosystem II Psb27 protein; Plays a role in the repair and/or biogenesis of the calcium- manganese-oxide cluster on the lumenal face of the thylakoid membrane. Its presence in a photosystem II (PSII) preparation prevents binding of some small extrinsic subunits and thus assembly of calcium-manganese- oxide cluster.


ensembl_gene_id: RS9917_09781
symbol: proS
gene_biotype: protein_coding
description:
  tRNA synthetases, class-II (G, H, P and S):Prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designa [...]


ensembl_gene_id: RS9917_09791
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: RS9917_09821
symbol: EAQ69724.1
gene_biotype: protein_coding
description:
  Possible alpha-ribazole-5'-P phosphatase; COG0406 Fructose-2,6-bisphosphatase; Belongs to the phosphoglycerate mutase family.


ensembl_gene_id: RS9917_09836
symbol: EAQ69727.1
gene_biotype: protein_coding
description:
  Putative peptidoglycan synthetase (pbp transpeptidase domain); COG0768 Cell division protein FtsI/penicillin-binding protein 2.


ensembl_gene_id: RS9917_09841
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 1 subfamily.


ensembl_gene_id: RS9917_09846
symbol: EAQ69729.1
gene_biotype: protein_coding
description:
  COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.


ensembl_gene_id: RS9917_09861
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor protein Rrf; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: RS9917_09891
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: RS9917_09896
symbol: EAQ69739.1
gene_biotype: protein_coding
description:
  Acetolactate synthase; COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase].


ensembl_gene_id: RS9917_09951
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: RS9917_09956
symbol: EAQ69751.1
gene_biotype: protein_coding
description:
  Putative short-chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: RS9917_10006
symbol: EAQ69761.1
gene_biotype: protein_coding
description:
  Light dependent protochlorophyllide oxido-reductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide).


ensembl_gene_id: RS9917_10011
symbol: chlL
gene_biotype: protein_coding
description:
  Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP.


ensembl_gene_id: RS9917_10016
symbol: chlB
gene_biotype: protein_coding
description:
  Light-independent protochlorophyllide reductase, B subunit; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (ChlN-ChlB) is the catalytic component of the complex.


ensembl_gene_id: RS9917_10021
symbol: chlN
gene_biotype: protein_coding
description:
  Light-independent protochlorophyllide reductase, N subunit; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (ChlN-ChlB) is the catalytic component of the complex.


ensembl_gene_id: RS9917_10046
symbol: EAQ69769.1
gene_biotype: protein_coding
description:
  Carboxysome shell peptide; COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein.


ensembl_gene_id: RS9917_10051
symbol: cbbL
gene_biotype: protein_coding
description:
  Ribulose-bisphosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily.


ensembl_gene_id: RS9917_10086
symbol: EAQ69777.1
gene_biotype: protein_coding
description:
  NAD(P)H dehydrogenase, subunit NdhF3 family protein; COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit.


ensembl_gene_id: RS9917_10141
symbol: EAQ69788.1
gene_biotype: protein_coding
description:
  ATPase; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily.


ensembl_gene_id: RS9917_10146
symbol: gloB
gene_biotype: protein_coding
description:
  Putative hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.


ensembl_gene_id: RS9917_10151
symbol: hisG
gene_biotype: protein_coding
description:
  Possible ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: RS9917_10156
symbol: EAQ69791.1
gene_biotype: protein_coding
description:
  Putative multidrug efflux ABC transporter; COG1132 ABC-type multidrug transport system, ATPase and permease components.


ensembl_gene_id: RS9917_10186
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: RS9917_10211
symbol: EAQ69802.1
gene_biotype: protein_coding
description:
  Probable glutathione reductase (NADPH); COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes.


ensembl_gene_id: RS9917_10271
symbol: EAQ69814.1
gene_biotype: protein_coding
description:
  COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: RS9917_10331
symbol: EAQ69826.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier protein] reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).


ensembl_gene_id: RS9917_10361
symbol: ndhL
gene_biotype: protein_coding
description:
  Possible inorganic carbon transport protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.


ensembl_gene_id: RS9917_10371
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: RS9917_10386
symbol: EAQ69837.1
gene_biotype: protein_coding
description:
  Cytochrome c6 (soluble cytochrome f) (cytochrome c553); COG2010 Cytochrome c, mono- and diheme variants.


ensembl_gene_id: RS9917_10426
symbol: EAQ69845.1
gene_biotype: protein_coding
description:
  Possible type II alternative RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: RS9917_10441
symbol: hisI
gene_biotype: protein_coding
description:
  Histidine biosynthesis bifunctional protein HisIE; COG0139 Phosphoribosyl-AMP cyclohydrolase; In the N-terminal section; belongs to the PRA-CH family.


ensembl_gene_id: RS9917_10451
symbol: clpB
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: RS9917_10481
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase HemE; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: RS9917_10486
symbol: glgB
gene_biotype: protein_coding
description:
  1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: RS9917_10526
symbol: proA
gene_biotype: protein_coding
description:
  Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: RS9917_10531
symbol: EAQ69866.1
gene_biotype: protein_coding
description:
  Possible dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: RS9917_10536
symbol: EAQ69867.1
gene_biotype: protein_coding
description:
  Lipase family protein; COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold.


ensembl_gene_id: RS9917_10571
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: RS9917_10606
symbol: trpS
gene_biotype: protein_coding
description:
  t-RNA synthetase, class Ib:Tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: RS9917_10616
symbol: EAQ69883.1
gene_biotype: protein_coding
description:
  Putative cation efflux transporter (CDF family protein); COG0053 Predicted Co/Zn/Cd cation transporters; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: RS9917_10626
symbol: psbA-2
gene_biotype: protein_coding
description:
  Photosystem q(b) protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors.


ensembl_gene_id: RS9917_10631
symbol: EAQ69886.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases.


ensembl_gene_id: RS9917_10636
symbol: katG
gene_biotype: protein_coding
description:
  Catalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.


ensembl_gene_id: RS9917_10671
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: RS9917_10716
symbol: EAQ69903.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.


ensembl_gene_id: RS9917_10731
symbol: EAQ69906.1
gene_biotype: protein_coding
description:
  Cell death suppressor protein; COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit.


ensembl_gene_id: RS9917_10746
symbol: EAQ69909.1
gene_biotype: protein_coding
description:
  Zinc-containing alcohol dehydrogenase superfamily protein; COG1064 Zn-dependent alcohol dehydrogenases.


ensembl_gene_id: RS9917_10761
symbol: EAQ69912.1
gene_biotype: protein_coding
description:
  Possible 3-hydroxyacid dehydrogenase; COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases.


ensembl_gene_id: RS9917_10816
symbol: EAQ69923.1
gene_biotype: protein_coding
description:
  Putative diguanylate cyclase/phosphodiesterase (GGDEF & EALdomains) with PAS/PAC sensor(s); COG2202 FOG: PAS/PAC domain.


ensembl_gene_id: RS9917_10846
symbol: EAQ69929.1
gene_biotype: protein_coding
description:
  Putative ABC transporter, inner membrane subunit; COG0390 ABC-type uncharacterized transport system, permease component.


ensembl_gene_id: RS9917_10866
symbol: EAQ69933.1
gene_biotype: protein_coding
description:
  ABC transporter, substrate binding protein, possibly Mn; COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: RS9917_10871
symbol: EAQ69934.1
gene_biotype: protein_coding
description:
  ABC transporter, ATP binding domain, possibly Mn transporter; COG1121 ABC-type Mn/Zn transport systems, ATPase component.


ensembl_gene_id: RS9917_10886
symbol: EAQ69937.1
gene_biotype: protein_coding
description:
  Sodium:solute transporter family, possible urea transporter; COG0591 Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: RS9917_10896
symbol: EAQ69939.1
gene_biotype: protein_coding
description:
  COG0540 Aspartate carbamoyltransferase, catalytic chain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.


ensembl_gene_id: RS9917_10906
symbol: EAQ69941.1
gene_biotype: protein_coding
description:
  Amidase, hydantoinase/carbamoylase; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.


ensembl_gene_id: RS9917_10996
symbol: petJ
gene_biotype: protein_coding
description:
  Cytochrome c, class IC:Cytochrome c, class I; Functions as an electron carrier between membrane-bound cytochrome b6-f and photosystem I in oxygenic photosynthesis.


ensembl_gene_id: RS9917_11006
symbol: EAQ69961.1
gene_biotype: protein_coding
description:
  Periplasmic solute binding protein; COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: RS9917_11011
symbol: EAQ69962.1
gene_biotype: protein_coding
description:
  ABC transporter,ATP binding component, possibly zinc transport; COG1121 ABC-type Mn/Zn transport systems, ATPase component.


ensembl_gene_id: RS9917_11086
symbol: EAQ69977.1
gene_biotype: protein_coding
description:
  Hypothetical LytS, regulator of cell autolysis; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.


ensembl_gene_id: RS9917_11091
symbol: EAQ69978.1
gene_biotype: protein_coding
description:
  Putative two-component response regulator protein; COG3279 Response regulator of the LytR/AlgR family.


ensembl_gene_id: RS9917_11141
symbol: EAQ69988.1
gene_biotype: protein_coding
description:
  Type I site-specific deoxyribonuclease (specificity subunit); COG0732 Restriction endonuclease S subunits.


ensembl_gene_id: RS9917_11265
symbol: EAQ69015.1
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: RS9917_11290
symbol: EAQ69020.1
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, Crp/Fnr family protein; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.


ensembl_gene_id: RS9917_11295
symbol: EAQ69021.1
gene_biotype: protein_coding
description:
  Alkyl hydroperoxide reductase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.


ensembl_gene_id: RS9917_11340
symbol: menD
gene_biotype: protein_coding
description:
  2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylic acidsynthase/2-oxoglutarate decarboxylase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily.


ensembl_gene_id: RS9917_11345
symbol: menB
gene_biotype: protein_coding
description:
  Naphthoate synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA).


ensembl_gene_id: RS9917_11365
symbol: murF
gene_biotype: protein_coding
description:
  Cytoplasmic peptidoglycan synthetases, N-terminal; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: RS9917_11370
symbol: glmU
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: RS9917_11380
symbol: aroA
gene_biotype: protein_coding
description:
  EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: RS9917_11385
symbol: EAQ69039.1
gene_biotype: protein_coding
description:
  Carboxylyase-related protein; COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases; Belongs to the UbiD family.


ensembl_gene_id: RS9917_11390
symbol: comB
gene_biotype: protein_coding
description:
  Hypothetical protein; COG2045 Phosphosulfolactate phosphohydrolase and related enzymes; Belongs to the ComB family.


ensembl_gene_id: RS9917_11410
symbol: EAQ69044.1
gene_biotype: protein_coding
description:
  Polyprenyl synthetase; COG0142 Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: RS9917_11420
symbol: acsA
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: RS9917_11450
symbol: EAQ69052.1
gene_biotype: protein_coding
description:
  Possible transcriptional regulator; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.


ensembl_gene_id: RS9917_11465
symbol: msrA-2
gene_biotype: protein_coding
description:
  Methionine sulfoxide reductase A; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: RS9917_11480
symbol: trpD
gene_biotype: protein_coding
description:
  Putative Anthranilate synthase component II; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: RS9917_11490
symbol: EAQ69060.1
gene_biotype: protein_coding
description:
  COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); Belongs to the anti-sigma-factor antagonist family.


ensembl_gene_id: RS9917_11495
symbol: mrnC
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.


ensembl_gene_id: RS9917_11500
symbol: EAQ69062.1
gene_biotype: protein_coding
description:
  tRNA/rRNA methyltransferase (SpoU):RNA methyltransferase TrmH; COG1530 Ribonucleases G and E; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: RS9917_11510
symbol: gatA
gene_biotype: protein_coding
description:
  Glutamyl-tRNA(Gln) amidotransferase A subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: RS9917_11525
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: RS9917_11530
symbol: ruvA
gene_biotype: protein_coding
description:
  Putative holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: RS9917_11545
symbol: dnaG
gene_biotype: protein_coding
description:
  CHC2 zinc finger:Toprim domain; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: RS9917_11575
symbol: EAQ69077.1
gene_biotype: protein_coding
description:
  Putative SOS mutagenesis protein UmuD; COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases); Belongs to the peptidase S24 family.


ensembl_gene_id: RS9917_11610
symbol: EAQ69084.1
gene_biotype: protein_coding
description:
  ATP/GTP-binding protein, putative; COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member.


ensembl_gene_id: RS9917_11665
symbol: rlmH
gene_biotype: protein_coding
description:
  Hypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: RS9917_11680
symbol: EAQ69098.1
gene_biotype: protein_coding
description:
  Uncharacterised protein family protein; COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase; Belongs to the UPF0102 family.


ensembl_gene_id: RS9917_11690
symbol: rsmA
gene_biotype: protein_coding
description:
  Putative rRNA (adenine-N6,N6)-dimethyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: RS9917_11695
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: RS9917_11710
symbol: EAQ69104.1
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E1 beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.


ensembl_gene_id: RS9917_11715
symbol: secD
gene_biotype: protein_coding
description:
  Preprotein translocase subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.


ensembl_gene_id: RS9917_11720
symbol: secF
gene_biotype: protein_coding
description:
  Preprotein translocase subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecF subfamily.


ensembl_gene_id: RS9917_11745
symbol: psb28
gene_biotype: protein_coding
description:
  Putative photosystem II reaction center Psb28 protein; COG0137 Argininosuccinate synthase; Belongs to the Psb28 family.


ensembl_gene_id: RS9917_11795
symbol: EAQ69121.1
gene_biotype: protein_coding
description:
  Phycobilisome core component-allophycocyanin beta-18 subunit; COG0459 Chaperonin GroEL (HSP60 family).


ensembl_gene_id: RS9917_11805
symbol: tadA
gene_biotype: protein_coding
description:
  Putative cytidine/deoxycytidylate deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: RS9917_11830
symbol: lspA
gene_biotype: protein_coding
description:
  Putative lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: RS9917_11855
symbol: pcyA
gene_biotype: protein_coding
description:
  Ferredoxin-dependent biliverdin reductase; Catalyzes the four-electron reduction of biliverdin IX-alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin. Belongs to the HY2 family.


ensembl_gene_id: RS9917_11890
symbol: tsf
gene_biotype: protein_coding
description:
  Putative Elongation factor Ts, EF-Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: RS9917_11900
symbol: recG
gene_biotype: protein_coding
description:
  Putative DNA helicase; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: RS9917_11905
symbol: EAQ69143.1
gene_biotype: protein_coding
description:
  D-ala-D-ala dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide. Belongs to the peptidase M15D family.


ensembl_gene_id: RS9917_11960
symbol: ccsA
gene_biotype: protein_coding
description:
  Possible heme transporter; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment.


ensembl_gene_id: RS9917_11970
symbol: EAQ69156.1
gene_biotype: protein_coding
description:
  COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins; Belongs to the FBPase class 2 family.


ensembl_gene_id: RS9917_11975
symbol: hemA
gene_biotype: protein_coding
description:
  Possible glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: RS9917_11980
symbol: EAQ69158.1
gene_biotype: protein_coding
description:
  COG0448 ADP-glucose pyrophosphorylase; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: RS9917_11985
symbol: EAQ69159.1
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.


ensembl_gene_id: RS9917_12060
symbol: purQ
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist in  [...]


ensembl_gene_id: RS9917_12070
symbol: EAQ69176.1
gene_biotype: protein_coding
description:
  Fructose-1,6-bisphosphate aldolase class II; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.


ensembl_gene_id: RS9917_12085
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: RS9917_12090
symbol: EAQ69180.1
gene_biotype: protein_coding
description:
  Putative type 4 prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.


ensembl_gene_id: RS9917_12105
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: RS9917_12110
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: RS9917_12115
symbol: proB
gene_biotype: protein_coding
description:
  Putative glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: RS9917_12130
symbol: EAQ69188.1
gene_biotype: protein_coding
description:
  Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: RS9917_12180
symbol: EAQ69198.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; COG0558 Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: RS9917_12225
symbol: EAQ69207.1
gene_biotype: protein_coding
description:
  Possible ligand gated channel (GIC family protein); COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.


ensembl_gene_id: RS9917_12255
symbol: EAQ69213.1
gene_biotype: protein_coding
description:
  Possible ABC transporter component, ATP binding protein; COG1119 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA.


ensembl_gene_id: RS9917_12275
symbol: EAQ69217.1
gene_biotype: protein_coding
description:
  Esterase/lipase/thioesterase family active site protein; COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold.


ensembl_gene_id: RS9917_12305
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthetase A protein; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: RS9917_12335
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: RS9917_12345
symbol: purK
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase, ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: RS9917_12375
symbol: petN
gene_biotype: protein_coding
description:
  PetN protein; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.


ensembl_gene_id: RS9917_12395
symbol: clpP-4
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: RS9917_12405
symbol: ftsH-4
gene_biotype: protein_coding
description:
  FtsH ATP-dependent protease-like protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: RS9917_12410
symbol: EAQ69244.1
gene_biotype: protein_coding
description:
  Possible ABC transporter; COG0577 ABC-type antimicrobial peptide transport system, permease component.


ensembl_gene_id: RS9917_12430
symbol: EAQ69248.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: RS9917_12435
symbol: ilvA
gene_biotype: protein_coding
description:
  Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: RS9917_12440
symbol: dxs
gene_biotype: protein_coding
description:
  Deoxyxylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: RS9917_12475
symbol: corA
gene_biotype: protein_coding
description:
  Probable cation transporter; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: RS9917_12490
symbol: EAQ69260.1
gene_biotype: protein_coding
description:
  ABC transporter for sugars, ATP binding protein; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.


ensembl_gene_id: RS9917_12495
symbol: EAQ69261.1
gene_biotype: protein_coding
description:
  ABC transporter component, likely for sugar transport; COG0395 ABC-type sugar transport system, permease component.


ensembl_gene_id: RS9917_12500
symbol: EAQ69262.1
gene_biotype: protein_coding
description:
  ABC transporter possibly for trehalose/maltose, membrane component; COG1175 ABC-type sugar transport systems, permease components.


ensembl_gene_id: RS9917_12505
symbol: EAQ69263.1
gene_biotype: protein_coding
description:
  ABC transporter for sugars, solute-binding protein; COG1653 ABC-type sugar transport system, periplasmic component.


ensembl_gene_id: RS9917_12530
symbol: EAQ69268.1
gene_biotype: protein_coding
description:
  Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: RS9917_12535
symbol: hisZ
gene_biotype: protein_coding
description:
  tRNA synthetases, class-II (G, H, P and S); Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.


ensembl_gene_id: RS9917_12540
symbol: EAQ69270.1
gene_biotype: protein_coding
description:
  Inositol-1(or 4)-monophosphatase; COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family.


ensembl_gene_id: RS9917_12550
symbol: pstB
gene_biotype: protein_coding
description:
  Putative phosphate ABC transporter, ATP binding subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: RS9917_12560
symbol: EAQ69274.1
gene_biotype: protein_coding
description:
  Putative phosphate ABC transporter; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: RS9917_12565
symbol: dnaK-2
gene_biotype: protein_coding
description:
  Molecular chaperone DnaK, heat shock protein; Acts as a chaperone; Belongs to the heat shock protein 70 family.


ensembl_gene_id: RS9917_12580
symbol: murQ
gene_biotype: protein_coding
description:
  Glucokinase regulatory-like protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.


ensembl_gene_id: RS9917_12585
symbol: mtnP
gene_biotype: protein_coding
description:
  Probable methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily.


ensembl_gene_id: RS9917_12595
symbol: ribBA
gene_biotype: protein_coding
description:
  Possible GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: RS9917_12600
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: RS9917_12605
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: RS9917_12645
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: RS9917_12650
symbol: EAQ69292.1
gene_biotype: protein_coding
description:
  Possible cysteine desulfurase (class-V aminotransferase family protein); COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.


ensembl_gene_id: RS9917_12665
symbol: EAQ69295.1
gene_biotype: protein_coding
description:
  Putative D-Ala-D-Ala carboxypeptidase 3 (S13) family protein; COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4).


ensembl_gene_id: RS9917_12675
symbol: coaD
gene_biotype: protein_coding
description:
  Putative pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: RS9917_12680
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: RS9917_12715
symbol: ilvE
gene_biotype: protein_coding
description:
  Putative Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: RS9917_12720
symbol: EAQ69306.1
gene_biotype: protein_coding
description:
  5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.


ensembl_gene_id: RS9917_12740
symbol: EAQ69310.1
gene_biotype: protein_coding
description:
  Possible CsgA C-factor signaling protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).


ensembl_gene_id: RS9917_12755
symbol: EAQ69313.1
gene_biotype: protein_coding
description:
  Possible type 3 alternative RNA polymerase sigma factor; COG1191 DNA-directed RNA polymerase specialized sigma subunit; Belongs to the sigma-70 factor family.


ensembl_gene_id: RS9917_12780
symbol: EAQ69318.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: RS9917_12785
symbol: pheT
gene_biotype: protein_coding
description:
  Phenylalanyl-tRNA synthetase beta subunit; COG0073 EMAP domain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: RS9917_12795
symbol: rpsR
gene_biotype: protein_coding
description:
  Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: RS9917_12815
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: RS9917_12840
symbol: pcxA
gene_biotype: protein_coding
description:
  CemA family protein; Involved in light-induced Na(+)-dependent proton extrusion. Also seems to be involved in CO(2) transport; Belongs to the CemA family.


ensembl_gene_id: RS9917_12850
symbol: EAQ69332.1
gene_biotype: protein_coding
description:
  Putative tRNA/rRNA methyltransferase (SpoU family protein); Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.


ensembl_gene_id: RS9917_12870
symbol: EAQ69336.1
gene_biotype: protein_coding
description:
  COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family.


ensembl_gene_id: RS9917_12925
symbol: EAQ69347.1
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin, iron-sulfur binding domain:Sigma-54 factor; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.


ensembl_gene_id: RS9917_12930
symbol: EAQ69348.1
gene_biotype: protein_coding
description:
  COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: RS9917_13020
symbol: EAQ69366.1
gene_biotype: protein_coding
description:
  K+ channel, inward rectifier; COG1226 Kef-type K+ transport systems, predicted NAD-binding component.


ensembl_gene_id: RS9917_13035
symbol: pdxH
gene_biotype: protein_coding
description:
  Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).


ensembl_gene_id: RS9917_13055
symbol: cpdA
gene_biotype: protein_coding
description:
  Possible ICC (3',5'-cyclic-nucleotide phosphodiesterase) protein; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.


ensembl_gene_id: RS9917_13060
symbol: EAQ69374.1
gene_biotype: protein_coding
description:
  Ferric uptake regulator family protein; COG0735 Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family.


ensembl_gene_id: RS9917_13110
symbol: EAQ69384.1
gene_biotype: protein_coding
description:
  Serine/threonine specific protein phosphatase:DNA repair exonuclease; COG0420 DNA repair exonuclease.


ensembl_gene_id: RS9917_13140
symbol: metAA
gene_biotype: protein_coding
description:
  Putative homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.


ensembl_gene_id: RS9917_13180
symbol: EAQ69398.1
gene_biotype: protein_coding
description:
  ABC transporter for amino acids, membrane component; COG4597 ABC-type amino acid transport system, permease component.


ensembl_gene_id: RS9917_13185
symbol: EAQ69399.1
gene_biotype: protein_coding
description:
  ABC transporter for amino acids, substrate binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.


ensembl_gene_id: RS9917_13220
symbol: EAQ69406.1
gene_biotype: protein_coding
description:
  Glucose-methanol-choline (GMC) oxidoreductase:NAD binding site; COG2303 Choline dehydrogenase and related flavoproteins.


ensembl_gene_id: RS9917_13340
symbol: EAQ69430.1
gene_biotype: protein_coding
description:
  Dioxygenase alpha subunit; COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit.


ensembl_gene_id: RS9917_13345
symbol: EAQ69431.1
gene_biotype: protein_coding
description:
  DMT superfamily multiple drug (quaternary ammonium compounds)efflux pump; COG2076 Membrane transporters of cations and cationic drugs.


ensembl_gene_id: RS9917_13583
symbol: rsfS
gene_biotype: protein_coding
description:
  Hypothetical protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: RS9917_13623
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: RS9917_13628
symbol: EAQ67924.1
gene_biotype: protein_coding
description:
  Putative dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: RS9917_13633
symbol: EAQ67925.1
gene_biotype: protein_coding
description:
  Sensory protein with histidine kinase domain; COG3614 Predicted periplasmic ligand-binding sensor domain.


ensembl_gene_id: RS9917_13638
symbol: EAQ67926.1
gene_biotype: protein_coding
description:
  Protoporphyrin IX Magnesium chelatase subunit chlH; COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases.


ensembl_gene_id: RS9917_13643
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: RS9917_13658
symbol: EAQ67930.1
gene_biotype: protein_coding
description:
  Possible 2-octaprenyl-6-methoxyphenol 4-monoxygenase; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.


ensembl_gene_id: RS9917_13668
symbol: apt
gene_biotype: protein_coding
description:
  Possible phosphoribosyl transferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: RS9917_13878
symbol: EAQ67974.1
gene_biotype: protein_coding
description:
  Virulence-associated protein D; Cleaves ssRNA, mostly between U:A. Belongs to the VapD ribonuclease family.


ensembl_gene_id: RS9917_13913
symbol: EAQ67981.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system.


