# geneInfo

ensembl_gene_id: ACP_0001
symbol: ACP_0001
gene_biotype: protein_coding
description:
  YkgG family protein AMBIGUITY; this gene contains a premature stop which is not the result of sequencing error; identified by match to protein family HMM PF02589.


ensembl_gene_id: ACP_0002
symbol: ACP_0002
gene_biotype: protein_coding
description:
  Iron-sulfur cluster binding protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF02589; match to protein family HMM TIGR00273.


ensembl_gene_id: ACP_0009
symbol: ACP_0009
gene_biotype: protein_coding
description:
  Tat pathway signal sequence domain protein; Identified by match to protein family HMM PF06824; match to protein family HMM TIGR01409.


ensembl_gene_id: ACP_0010
symbol: ACP_0010
gene_biotype: protein_coding
description:
  Putative alpha-1,2-mannosidase; Identified by match to protein family HMM PF07971; match to protein family HMM TIGR01180; match to protein family HMM TIGR01409.


ensembl_gene_id: ACP_0012
symbol: mdtN
gene_biotype: protein_coding
description:
  Multidrug resistance protein MdtN; Identified by similarity to SP:P32716; match to protein family HMM PF00529.


ensembl_gene_id: ACP_0015
symbol: ACP_0015
gene_biotype: protein_coding
description:
  alpha-N-arabinofuranosidase; Identified by similarity to GB:AAC38456.1; match to protein family HMM PF02018.


ensembl_gene_id: ACP_0018
symbol: ACP_0018
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: ACP_0019
symbol: pnbA1
gene_biotype: protein_coding
description:
  Para-nitrobenzyl esterase; Identified by similarity to SP:P37967; match to protein family HMM PF00135; Belongs to the type-B carboxylesterase/lipase family.


ensembl_gene_id: ACP_0020
symbol: ACP_0020
gene_biotype: protein_coding
description:
  Glycosyl hydrolase family, 3; Identified by match to protein family HMM PF00933; match to protein family HMM PF01915.


ensembl_gene_id: ACP_0022
symbol: ACP_0022
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family; Identified by match to protein family HMM PF00392; match to protein family HMM PF00532.


ensembl_gene_id: ACP_0023
symbol: ACP_0023
gene_biotype: protein_coding
description:
  TonB-dependent receptor; Identified by similarity to SP:P38370; match to protein family HMM PF00593.


ensembl_gene_id: ACP_0024
symbol: ACP_0024
gene_biotype: protein_coding
description:
  Glycosyl hydrolase family, 32; Identified by match to protein family HMM PF00251; Belongs to the glycosyl hydrolase 32 family.


ensembl_gene_id: ACP_0025
symbol: ACP_0025
gene_biotype: protein_coding
description:
  MFS transporter, SP family; Identified by similarity to SP:P09098; match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00879; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: ACP_0029
symbol: ACP_0029
gene_biotype: protein_coding
description:
  Glycosyl hydrolase, family 20; Identified by match to protein family HMM PF00728; match to protein family HMM PF02838.


ensembl_gene_id: ACP_0032
symbol: ACP_0032
gene_biotype: protein_coding
description:
  Transporter, gluconate:H+ symporter (GntP) family; Identified by match to protein family HMM PF02447; match to protein family HMM PF03600; match to protein family HMM TIGR00791.


ensembl_gene_id: ACP_0034
symbol: ACP_0034
gene_biotype: protein_coding
description:
  N-acyl-D-aspartate deacylase; Identified by similarity to SP:P94212; match to protein family HMM PF01979; match to protein family HMM PF07908; match to protein family HMM PF07969.


ensembl_gene_id: ACP_0036
symbol: ACP_0036
gene_biotype: protein_coding
description:
  Glycosyl hydrolase, family 20, catalytic domain protein; Identified by match to protein family HMM PF00728.


ensembl_gene_id: ACP_0037
symbol: chiA
gene_biotype: protein_coding
description:
  Identified by similarity to GB:AAB70917.1; match to protein family HMM PF00704; Belongs to the glycosyl hydrolase 18 family.


ensembl_gene_id: ACP_0038
symbol: ACP_0038
gene_biotype: protein_coding
description:
  Identified by similarity to GB:AAB70917.1; match to protein family HMM PF00041; match to protein family HMM PF00704; match to protein family HMM PF02839.


ensembl_gene_id: ACP_0039
symbol: ACP_0039
gene_biotype: protein_coding
description:
  Transcriptional regulator, DeoR family; Identified by match to protein family HMM PF00455; match to protein family HMM PF01978; match to protein family HMM PF08220.


ensembl_gene_id: ACP_0040
symbol: ACP_0040
gene_biotype: protein_coding
description:
  tonB-dependent receptor plug domain protein; Identified by match to protein family HMM PF05738; match to protein family HMM PF07715.


ensembl_gene_id: ACP_0041
symbol: ACP_0041
gene_biotype: protein_coding
description:
  TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.


ensembl_gene_id: ACP_0049
symbol: ACP_0049
gene_biotype: protein_coding
description:
  Alpha-galactosidase; Identified by similarity to GB:BAB83765.1; match to protein family HMM PF02065.


ensembl_gene_id: ACP_0050
symbol: sucA
gene_biotype: protein_coding
description:
  2-oxoglutarate dehydrogenase, E1 component; Identified by match to protein family HMM PF00676; match to protein family HMM PF02779; match to protein family HMM TIGR00239.


ensembl_gene_id: ACP_0051
symbol: ACP_0051
gene_biotype: protein_coding
description:
  Plasmid stabilization system protein, RelE/ParE family; Identified by match to protein family HMM PF05016.


ensembl_gene_id: ACP_0052
symbol: ACP_0052
gene_biotype: protein_coding
description:
  Putative addiction module component, TIGR02574 family; Identified by match to protein family HMM TIGR02574.


ensembl_gene_id: ACP_0056
symbol: ACP_0056
gene_biotype: protein_coding
description:
  Identified by match to protein family HMM PF00675; match to protein family HMM PF05193; Belongs to the peptidase M16 family.


ensembl_gene_id: ACP_0057
symbol: rlmN
gene_biotype: protein_coding
description:
  Radical SAM enzyme, Cfr family; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: ACP_0060
symbol: ACP_0060
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.


ensembl_gene_id: ACP_0063
symbol: ACP_0063
gene_biotype: protein_coding
description:
  Conserved hypothetical protein TIGR00305; Identified by match to protein family HMM PF01850; match to protein family HMM TIGR00305.


ensembl_gene_id: ACP_0064
symbol: galT
gene_biotype: protein_coding
description:
  UTP--hexose-1-phosphate uridylyltransferase; Identified by similarity to SP:P09148; match to protein family HMM PF01087; match to protein family HMM PF02744; match to protein family HMM TIGR00209; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.


ensembl_gene_id: ACP_0065
symbol: ACP_0065
gene_biotype: protein_coding
description:
  Transcriptional regulator, lacI family; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.


ensembl_gene_id: ACP_0066
symbol: agaN
gene_biotype: protein_coding
description:
  Alpha-galactosidase; Identified by similarity to GB:AAD23585.1; match to protein family HMM PF02065.


ensembl_gene_id: ACP_0067
symbol: ACP_0067
gene_biotype: protein_coding
description:
  Putative Oar protein; Identified by match to protein family HMM PF05738; match to protein family HMM PF07715.


ensembl_gene_id: ACP_0068
symbol: ACP_0068
gene_biotype: protein_coding
description:
  TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.


ensembl_gene_id: ACP_0072
symbol: ACP_0072
gene_biotype: protein_coding
description:
  Putative beta-galactosidase; Identified by match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837; Belongs to the glycosyl hydrolase 2 family.


ensembl_gene_id: ACP_0074
symbol: yhjQ
gene_biotype: protein_coding
description:
  Cellulose synthase operon protein YhjQ; Identified by similarity to GB:AAL71841.1; match to protein family HMM TIGR03371.


ensembl_gene_id: ACP_0075
symbol: acsAB
gene_biotype: protein_coding
description:
  Cellulose synthase I; Identified by similarity to SP:P21877; match to protein family HMM PF00535; match to protein family HMM PF03170; match to protein family HMM PF07238; match to protein family HMM TIGR03030.


ensembl_gene_id: ACP_0080
symbol: ACP_0080
gene_biotype: protein_coding
description:
  Osmosensitive K+ channel His kinase sensor domain/universal stress family protein; Identified by match to protein family HMM PF00582; match to protein family HMM PF02702.


ensembl_gene_id: ACP_0081
symbol: ACP_0081
gene_biotype: protein_coding
description:
  Sensory box histidine kinase, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF08448.


ensembl_gene_id: ACP_0082
symbol: ACP_0082
gene_biotype: protein_coding
description:
  Chloride transporter, ClC family; Identified by match to protein family HMM PF00571; match to protein family HMM PF00654.


ensembl_gene_id: ACP_0086
symbol: ACP_0086
gene_biotype: protein_coding
description:
  Conserved hypothetical protein TIGR00299; Identified by match to protein family HMM PF01969; match to protein family HMM TIGR00299; Belongs to the LarC family.


ensembl_gene_id: ACP_0089
symbol: icd1
gene_biotype: protein_coding
description:
  Isocitrate dehydrogenase, NADP-dependent; Identified by similarity to SP:P50214; match to protein family HMM PF00180; match to protein family HMM TIGR00183.


ensembl_gene_id: ACP_0090
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.


ensembl_gene_id: ACP_0092
symbol: ACP_0092
gene_biotype: protein_coding
description:
  Transcriptional regulator, AbrB family; Identified by match to protein family HMM PF04014; match to protein family HMM TIGR01439.


ensembl_gene_id: ACP_0095
symbol: ACP_0095
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, putative; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: ACP_0096
symbol: ACP_0096
gene_biotype: protein_coding
description:
  Peptidylprolyl cis-trans isomerase, cyclophilin-type, putative; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: ACP_0098
symbol: ACP_0098
gene_biotype: protein_coding
description:
  PAS domain S-box; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229.


ensembl_gene_id: ACP_0101
symbol: ACP_0101
gene_biotype: protein_coding
description:
  Fumarate reductase iron-sulfur protein; Identified by similarity to SP:P17596; match to protein family HMM PF00037; match to protein family HMM TIGR00384.


ensembl_gene_id: ACP_0102
symbol: sdhA
gene_biotype: protein_coding
description:
  Succinate dehydrogenase or fumarate reductase, flavoprotein subunit; Identified by similarity to GB:AAO42600.1; match to protein family HMM PF00890; match to protein family HMM PF02910; match to protein family HMM PF07992; match to protein family HMM TIGR01811.


ensembl_gene_id: ACP_0103
symbol: sdhC
gene_biotype: protein_coding
description:
  Succinate dehydrogenase, cytochrome b subunit; Identified by similarity to GB:AAO42599.1; match to protein family HMM TIGR02046.


ensembl_gene_id: ACP_0104
symbol: rdgB
gene_biotype: protein_coding
description:
  rdgB protein; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: ACP_0105
symbol: ACP_0105
gene_biotype: protein_coding
description:
  Base excision DNA repair protein, HhH-GPD family; Identified by match to protein family HMM PF00633; match to protein family HMM PF00730.


ensembl_gene_id: ACP_0107
symbol: motB1
gene_biotype: protein_coding
description:
  Chemotaxis protein MotB; Identified by similarity to SP:P28612; match to protein family HMM PF00691.


ensembl_gene_id: ACP_0108
symbol: motA
gene_biotype: protein_coding
description:
  Chemotaxis MotA protein; Identified by similarity to SP:P28611; match to protein family HMM PF01618.


ensembl_gene_id: ACP_0110
symbol: hag
gene_biotype: protein_coding
description:
  Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: ACP_0111
symbol: fliD
gene_biotype: protein_coding
description:
  Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: ACP_0113
symbol: ACP_0113
gene_biotype: protein_coding
description:
  Efflux ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.


ensembl_gene_id: ACP_0119
symbol: ACP_0119
gene_biotype: protein_coding
description:
  Response regulator/GGDEF domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00990; match to protein family HMM TIGR00254.


ensembl_gene_id: ACP_0120
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: ACP_0121
symbol: ACP_0121
gene_biotype: protein_coding
description:
  Amino acid transporter, L-type amino acid transporter (LAT) family; Identified by match to protein family HMM PF00324.


ensembl_gene_id: ACP_0122
symbol: ACP_0122
gene_biotype: protein_coding
description:
  Amino acid transporter, cationic amino acid transporter (CAT) family; Identified by match to protein family HMM PF00324.


ensembl_gene_id: ACP_0125
symbol: pfkA1
gene_biotype: protein_coding
description:
  Phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.


ensembl_gene_id: ACP_0126
symbol: ACP_0126
gene_biotype: protein_coding
description:
  Transcriptional regulator, MerR family; Identified by match to protein family HMM PF00376; match to protein family HMM TIGR01764.


ensembl_gene_id: ACP_0128
symbol: ACP_0128
gene_biotype: protein_coding
description:
  Peptidase, M24 family; Identified by match to protein family HMM PF00557; match to protein family HMM PF01321.


ensembl_gene_id: ACP_0129
symbol: accB
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: ACP_0131
symbol: accC
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: ACP_0134
symbol: vapC
gene_biotype: protein_coding
description:
  PIN domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.


ensembl_gene_id: ACP_0136
symbol: mqnD
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2); Belongs to the MqnA/MqnD family. MqnD subfamily.


ensembl_gene_id: ACP_0140
symbol: ACP_0140
gene_biotype: protein_coding
description:
  Phosphoglucomutase, alpha-D-glucose phosphate-specific; Identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880.


ensembl_gene_id: ACP_0147
symbol: ACP_0147
gene_biotype: protein_coding
description:
  Transporter, major facilitator family; Identified by match to protein family HMM PF05977; match to protein family HMM PF07690.


ensembl_gene_id: ACP_0148
symbol: rpsO
gene_biotype: protein_coding
description:
  Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.


ensembl_gene_id: ACP_0149
symbol: pnpA
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: ACP_0153
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: ACP_0155
symbol: murQ
gene_biotype: protein_coding
description:
  Glucokinase regulator (GCKR) family protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.


ensembl_gene_id: ACP_0157
symbol: ACP_0157
gene_biotype: protein_coding
description:
  GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.


ensembl_gene_id: ACP_0158
symbol: lepB1
gene_biotype: protein_coding
description:
  Signal peptidase I; Identified by similarity to SP:P72365; match to protein family HMM PF00717; match to protein family HMM TIGR02227; Belongs to the peptidase S26 family.


ensembl_gene_id: ACP_0159
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: ACP_0160
symbol: ACP_0160
gene_biotype: protein_coding
description:
  Sigma factor sigB regulation protein rsbU, putative; Identified by match to protein family HMM PF01590; match to protein family HMM PF07228.


ensembl_gene_id: ACP_0161
symbol: hpt
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Identified by match to protein family HMM PF00156; match to protein family HMM TIGR01203; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: ACP_0162
symbol: ACP_0162
gene_biotype: protein_coding
description:
  Putative prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins.


ensembl_gene_id: ACP_0166
symbol: uvrA1
gene_biotype: protein_coding
description:
  Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: ACP_0170
symbol: gspO
gene_biotype: protein_coding
description:
  Prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.


ensembl_gene_id: ACP_0173
symbol: menC
gene_biotype: protein_coding
description:
  O-succinylbenzoic acid synthetase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).


ensembl_gene_id: ACP_0176
symbol: gcdH
gene_biotype: protein_coding
description:
  glutaryl-CoA dehydrogenase; Identified by similarity to SP:Q92947; match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.


ensembl_gene_id: ACP_0177
symbol: ACP_0177
gene_biotype: protein_coding
description:
  PAS domain S-box/GGDEF/EAL domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.


ensembl_gene_id: ACP_0179
symbol: ACP_0179
gene_biotype: protein_coding
description:
  Transporter, putative ER-chloroplast lipid translocase (ECLT) family; Identified by match to protein family HMM PF02405; match to protein family HMM TIGR00056; Belongs to the MlaE permease family.


ensembl_gene_id: ACP_0180
symbol: ACP_0180
gene_biotype: protein_coding
description:
  Sigma-54 dependent DNA-binding response regulator; Identified by similarity to SP:Q06065; match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM PF07728.


ensembl_gene_id: ACP_0181
symbol: ACP_0181
gene_biotype: protein_coding
description:
  Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF08448; match to protein family HMM TIGR00229.


ensembl_gene_id: ACP_0182
symbol: glf
gene_biotype: protein_coding
description:
  UDP-galactopyranose mutase; Identified by match to protein family HMM PF03275; match to protein family HMM TIGR00031.


ensembl_gene_id: ACP_0184
symbol: ACP_0184
gene_biotype: protein_coding
description:
  Non-specific serine/threonine protein kinase; Identified by similarity to PDB:1MRU_A; match to protein family HMM PF00069; match to protein family HMM PF00515; match to protein family HMM PF07719.


ensembl_gene_id: ACP_0186
symbol: hrpB
gene_biotype: protein_coding
description:
  ATP-dependent helicase HrpB; Identified by match to protein family HMM PF00271; match to protein family HMM PF04408; match to protein family HMM PF08482; match to protein family HMM TIGR01970.


ensembl_gene_id: ACP_0188
symbol: ACP_0188
gene_biotype: protein_coding
description:
  Putative sensory box histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229.


ensembl_gene_id: ACP_0194
symbol: ACP_0194
gene_biotype: protein_coding
description:
  Oxidoreductase, Gfo/Idh/MocA family; Identified by match to protein family HMM PF01408; match to protein family HMM PF02894.


ensembl_gene_id: ACP_0196
symbol: ACP_0196
gene_biotype: protein_coding
description:
  MFS transporter, anion:cation symporter (ACS) family; Identified by match to protein family HMM PF07690.


ensembl_gene_id: ACP_0201
symbol: ACP_0201
gene_biotype: protein_coding
description:
  NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993.


ensembl_gene_id: ACP_0202
symbol: ACP_0202
gene_biotype: protein_coding
description:
  NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: ACP_0203
symbol: ACP_0203
gene_biotype: protein_coding
description:
  Oxidoreductase, zinc-binding dehydrogenase family; Identified by match to protein family HMM PF00107; match to protein family HMM PF08240.


ensembl_gene_id: ACP_0206
symbol: ACP_0206
gene_biotype: protein_coding
description:
  Putative clavaldehyde dehydrogenase; Identified by similarity to GB:AAF86624.1; match to protein family HMM PF00106; match to protein family HMM PF08659; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: ACP_0210
symbol: ACP_0210
gene_biotype: protein_coding
description:
  Antioxidant, AhpC/TSA family; Identified by match to protein family HMM PF00578; match to protein family HMM PF08534.


ensembl_gene_id: ACP_0213
symbol: katG
gene_biotype: protein_coding
description:
  Catalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.


ensembl_gene_id: ACP_0214
symbol: dinB
gene_biotype: protein_coding
description:
  Putative DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: ACP_0216
symbol: ACP_0216
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by match to protein family HMM TIGR03421; Belongs to the frataxin family.


ensembl_gene_id: ACP_0220
symbol: ACP_0220
gene_biotype: protein_coding
description:
  Two-component system, sensory transduction histidine kinase; Identified by match to protein family HMM PF04024.


ensembl_gene_id: ACP_0222
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: ACP_0225
symbol: modB
gene_biotype: protein_coding
description:
  Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: ACP_0226
symbol: modA
gene_biotype: protein_coding
description:
  Molybdate ABC transporter, periplasmic molybdate-binding protein; Identified by similarity to SP:P37734; match to protein family HMM PF01547; match to protein family HMM TIGR01256.


ensembl_gene_id: ACP_0227
symbol: ACP_0227
gene_biotype: protein_coding
description:
  ABC transporter solute-binding protein; Identified by match to protein family HMM PF00376; match to protein family HMM PF03459; match to protein family HMM TIGR00638; match to protein family HMM TIGR01764.


ensembl_gene_id: ACP_0228
symbol: thrC1
gene_biotype: protein_coding
description:
  Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.


ensembl_gene_id: ACP_0229
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: ACP_0230
symbol: trx
gene_biotype: protein_coding
description:
  Thioredoxin; Identified by similarity to SP:P06544; match to protein family HMM PF00085; match to protein family HMM TIGR01068; Belongs to the thioredoxin family.


ensembl_gene_id: ACP_0231
symbol: lexA
gene_biotype: protein_coding
description:
  LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: ACP_0232
symbol: ACP_0232
gene_biotype: protein_coding
description:
  DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.


ensembl_gene_id: ACP_0233
symbol: ACP_0233
gene_biotype: protein_coding
description:
  Sigma-54 dependent DNA-binding response regulator; Identified by match to protein family HMM PF00158; match to protein family HMM PF07728.


ensembl_gene_id: ACP_0234
symbol: ACP_0234
gene_biotype: protein_coding
description:
  Putative flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: ACP_0235
symbol: flgC
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgC; Identified by match to protein family HMM PF00460; match to protein family HMM PF06429; match to protein family HMM TIGR01395; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: ACP_0236
symbol: fliE
gene_biotype: protein_coding
description:
  Flagellar hook-basal body complex protein FliE; Identified by match to protein family HMM PF02049; match to protein family HMM TIGR00205.


ensembl_gene_id: ACP_0237
symbol: fliF
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: ACP_0238
symbol: fliG
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliG; Identified by match to protein family HMM PF01706; match to protein family HMM TIGR00207.


ensembl_gene_id: ACP_0240
symbol: fliI
gene_biotype: protein_coding
description:
  Flagellar protein export ATPase FliI; Identified by match to protein family HMM PF00006; match to protein family HMM PF02874; match to protein family HMM TIGR01026; match to protein family HMM TIGR02545; match to protein family HMM TIGR03496.


ensembl_gene_id: ACP_0244
symbol: flgE
gene_biotype: protein_coding
description:
  Flagellar hook protein flgE; Identified by similarity to SP:P75937; match to protein family HMM PF00460; match to protein family HMM PF06429; match to protein family HMM PF07559.


ensembl_gene_id: ACP_0246
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: ACP_0247
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Identified by similarity to SP:P35535; match to protein family HMM PF01313.


ensembl_gene_id: ACP_0248
symbol: fliR
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliR; Identified by match to protein family HMM PF01311; match to protein family HMM TIGR01400.


ensembl_gene_id: ACP_0249
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FlhB; Identified by similarity to SP:P40727; match to protein family HMM PF01312.


ensembl_gene_id: ACP_0250
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: ACP_0251
symbol: fliA
gene_biotype: protein_coding
description:
  Flagellar operon sigma factor FliA; Identified by match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02479; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family.


ensembl_gene_id: ACP_0254
symbol: ACP_0254
gene_biotype: protein_coding
description:
  Putative flagellar basal-body rod protein FlgG; Identified by similarity to SP:P23446; match to protein family HMM PF00460.


ensembl_gene_id: ACP_0255
symbol: flgG
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgG; Identified by similarity to SP:P16439; match to protein family HMM PF00460; match to protein family HMM PF06429.


ensembl_gene_id: ACP_0256
symbol: flgH
gene_biotype: protein_coding
description:
  Flagellar L-ring protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: ACP_0257
symbol: flgI
gene_biotype: protein_coding
description:
  Flagellar P-ring protein FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: ACP_0259
symbol: flgM
gene_biotype: protein_coding
description:
  Negative regulator of flagellin synthesis FlgM; Identified by similarity to SP:P43532; match to protein family HMM PF04316.


ensembl_gene_id: ACP_0261
symbol: flgK
gene_biotype: protein_coding
description:
  Flagellar hook-associated protein FlgK; Identified by similarity to SP:P33235; match to protein family HMM PF00460; match to protein family HMM PF06429; match to protein family HMM TIGR02492.


ensembl_gene_id: ACP_0262
symbol: ACP_0262
gene_biotype: protein_coding
description:
  Putative hydroxypyruvate reductase; Identified by similarity to SP:Q44472; match to protein family HMM PF05161.


ensembl_gene_id: ACP_0266
symbol: argE
gene_biotype: protein_coding
description:
  Acetylornithine deacetylase; Identified by similarity to GB:AAC82366.1; match to protein family HMM PF01546; match to protein family HMM PF07687.


ensembl_gene_id: ACP_0267
symbol: ACP_0267
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to SP:P37512; match to protein family HMM PF03190.


ensembl_gene_id: ACP_0271
symbol: ACP_0271
gene_biotype: protein_coding
description:
  Protease, Do family; Identified by match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037.


ensembl_gene_id: ACP_0272
symbol: ACP_0272
gene_biotype: protein_coding
description:
  DMT transporter, 10 TMS drug/metabolite exporter (DME) family; Identified by match to protein family HMM PF00892.


ensembl_gene_id: ACP_0278
symbol: lysS
gene_biotype: protein_coding
description:
  lysine--tRNA ligase; Identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00499; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: ACP_0282
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.


ensembl_gene_id: ACP_0284
symbol: nuoN1
gene_biotype: protein_coding
description:
  NADH dehydrogenase I, N subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: ACP_0285
symbol: ACP_0285
gene_biotype: protein_coding
description:
  NADH dehydrogenase I, M subunit; Identified by match to protein family HMM PF00361; match to protein family HMM TIGR01972.


ensembl_gene_id: ACP_0286
symbol: ACP_0286
gene_biotype: protein_coding
description:
  NADH dehydrogenase I, L subunit; Identified by match to protein family HMM PF00361; match to protein family HMM PF00662; match to protein family HMM TIGR01974.


ensembl_gene_id: ACP_0287
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH dehydrogenase I, K subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: ACP_0288
symbol: ACP_0288
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: ACP_0289
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH dehydrogenase I, H subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: ACP_0290
symbol: ACP_0290
gene_biotype: protein_coding
description:
  NADH dehydrogenase I, G subunit; Identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF00384; match to protein family HMM PF04879; Belongs to the complex I 75 kDa subunit family.


ensembl_gene_id: ACP_0291
symbol: ACP_0291
gene_biotype: protein_coding
description:
  NADH dehydrogenase I, F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.


ensembl_gene_id: ACP_0292
symbol: ACP_0292
gene_biotype: protein_coding
description:
  NADH dehydrogenase I, E subunit; Identified by match to protein family HMM PF01257; match to protein family HMM TIGR01958.


ensembl_gene_id: ACP_0294
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: ACP_0295
symbol: ACP_0295
gene_biotype: protein_coding
description:
  NADH dehydrogenase I, C subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: ACP_0296
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH dehydrogenase I, A subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: ACP_0300
symbol: eno
gene_biotype: protein_coding
description:
  Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: ACP_0302
symbol: gpmI
gene_biotype: protein_coding
description:
  2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: ACP_0305
symbol: ACP_0305
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:CAD14897.1; match to protein family HMM PF04966; Belongs to the OprB family.


ensembl_gene_id: ACP_0310
symbol: ACP_0310
gene_biotype: protein_coding
description:
  Shikimate kinase domain protein; Identified by match to protein family HMM PF01202; match to protein family HMM TIGR01313.


ensembl_gene_id: ACP_0311
symbol: mtnA
gene_biotype: protein_coding
description:
  Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: ACP_0312
symbol: ACP_0312
gene_biotype: protein_coding
description:
  Conserved domain protein; Identified by similarity to GB:AAR35012.1; match to protein family HMM PF03692.


ensembl_gene_id: ACP_0313
symbol: hmgA
gene_biotype: protein_coding
description:
  Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate.


ensembl_gene_id: ACP_0315
symbol: fahA
gene_biotype: protein_coding
description:
  Fumarylacetoacetase; Identified by match to protein family HMM PF01557; match to protein family HMM PF09298; match to protein family HMM TIGR01266.


ensembl_gene_id: ACP_0317
symbol: ACP_0317
gene_biotype: protein_coding
description:
  Homoserine dehydrogenase; Identified by match to protein family HMM PF00742; match to protein family HMM PF01842; match to protein family HMM PF03447.


ensembl_gene_id: ACP_0320
symbol: fdhA
gene_biotype: protein_coding
description:
  Formate dehydrogenase, alpha subunit; Identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01591.


ensembl_gene_id: ACP_0323
symbol: bhbA1
gene_biotype: protein_coding
description:
  methylmalonyl-CoA mutase; Identified by similarity to SP:O86028; match to protein family HMM PF01642; match to protein family HMM TIGR00641.


ensembl_gene_id: ACP_0328
symbol: ACP_0328
gene_biotype: protein_coding
description:
  2-oxoacid:ferredoxin/flavodoxin oxidoreductase gamma subunit family protein; Identified by match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR03710.


ensembl_gene_id: ACP_0329
symbol: ACP_0329
gene_biotype: protein_coding
description:
  Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein; Identified by similarity to GB:BAA10899.1; match to protein family HMM PF02775.


ensembl_gene_id: ACP_0330
symbol: ACP_0330
gene_biotype: protein_coding
description:
  Sialate O-acetylesterase homolog; Identified by similarity to GB:BAD48479.1; match to protein family HMM PF03629.


ensembl_gene_id: ACP_0332
symbol: ACP_0332
gene_biotype: protein_coding
description:
  Serine/threonine-protein kinase; Identified by similarity to SP:P54736; match to protein family HMM PF00069; match to protein family HMM PF00515; match to protein family HMM PF07719.


ensembl_gene_id: ACP_0334
symbol: thiS
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiS; Identified by match to protein family HMM PF02597; match to protein family HMM TIGR01683.


ensembl_gene_id: ACP_0335
symbol: yliD
gene_biotype: protein_coding
description:
  ABC transporter, peptide/opine/nickel uptake transporter (PepT) family, permease protein; Identified by match to protein family HMM PF00528.


ensembl_gene_id: ACP_0338
symbol: ACP_0338
gene_biotype: protein_coding
description:
  FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593.


ensembl_gene_id: ACP_0346
symbol: ACP_0346
gene_biotype: protein_coding
description:
  ABC transporter, (putative) drug resistance ATPase (Drug RA) family, ATP-binding protein; Identified by match to protein family HMM PF00005.


ensembl_gene_id: ACP_0347
symbol: ACP_0347
gene_biotype: protein_coding
description:
  ABC transporter, (putative) drug resistance ATPase-1 (Drug RA1) family, ATP-binding protein; Identified by match to protein family HMM PF00005.


ensembl_gene_id: ACP_0349
symbol: feoB
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Identified by match to protein family HMM PF01926; match to protein family HMM PF02421; match to protein family HMM PF07664; match to protein family HMM PF07670; match to protein family HMM TIGR00231; match to protein family HMM TIGR00437.


ensembl_gene_id: ACP_0352
symbol: ACP_0352
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:AAS03903.1; match to protein family HMM PF08837.


ensembl_gene_id: ACP_0355
symbol: ACP_0355
gene_biotype: protein_coding
description:
  2-oxo-acid dehydrogenase E1 component family protein; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: ACP_0361
symbol: argJ
gene_biotype: protein_coding
description:
  Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: ACP_0393
symbol: ACP_0393
gene_biotype: protein_coding
description:
  Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase domain protein; Identified by match to protein family HMM PF01832.


ensembl_gene_id: ACP_0402
symbol: ACP_0402
gene_biotype: protein_coding
description:
  Putative bacteriophage head morphogenesis protein, SPP1 gp7 family; Identified by match to protein family HMM PF04233; match to protein family HMM TIGR01641.


ensembl_gene_id: ACP_0419
symbol: ACP_0419
gene_biotype: protein_coding
description:
  HAD-superfamily hydrolase, subfamily IA, variant 3; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509.


ensembl_gene_id: ACP_0420
symbol: ribB
gene_biotype: protein_coding
description:
  3,4-dihydroxy-2-butanone 4-phosphate synthase/putative GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.


ensembl_gene_id: ACP_0426
symbol: ACP_0426
gene_biotype: protein_coding
description:
  Two-component osmotic transcriptional regulator kdpE, winged helix family; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.


ensembl_gene_id: ACP_0429
symbol: kdpA
gene_biotype: protein_coding
description:
  K+-transporting ATPase, A subunit; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane.


ensembl_gene_id: ACP_0430
symbol: kdpB
gene_biotype: protein_coding
description:
  K+-transporting ATPase, B subunit; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily.


ensembl_gene_id: ACP_0431
symbol: kdpC
gene_biotype: protein_coding
description:
  K+-transporting ATPase, C subunit; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex.


ensembl_gene_id: ACP_0433
symbol: ACP_0433
gene_biotype: protein_coding
description:
  Ortho-chlorophenol reductive dehalogenase; Identified by similarity to GB:AAD44542.1; match to protein family HMM PF00037.


ensembl_gene_id: ACP_0434
symbol: ACP_0434
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase AhpD domain protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: ACP_0439
symbol: ACP_0439
gene_biotype: protein_coding
description:
  Peroxidase family protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: ACP_0441
symbol: ACP_0441
gene_biotype: protein_coding
description:
  Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: ACP_0445
symbol: ACP_0445
gene_biotype: protein_coding
description:
  Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659.


ensembl_gene_id: ACP_0446
symbol: ACP_0446
gene_biotype: protein_coding
description:
  Oxidoreductase, 2-nitropropane dioxygenase family; Identified by match to protein family HMM PF03060.


ensembl_gene_id: ACP_0447
symbol: fixL
gene_biotype: protein_coding
description:
  Sensory box sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229.


ensembl_gene_id: ACP_0449
symbol: ACP_0449
gene_biotype: protein_coding
description:
  DNA-binding response regulator FixJ; Identified by similarity to SP:P23221; match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF08281.


ensembl_gene_id: ACP_0455
symbol: secG
gene_biotype: protein_coding
description:
  Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: ACP_0458
symbol: pdxT
gene_biotype: protein_coding
description:
  Glutamine amidotransferase, SNO family; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.


ensembl_gene_id: ACP_0459
symbol: pdxS
gene_biotype: protein_coding
description:
  Pyridoxine biosynthesis protein; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.


ensembl_gene_id: ACP_0460
symbol: ACP_0460
gene_biotype: protein_coding
description:
  Chloride transporter, ClC family; Identified by match to protein family HMM PF00654; match to protein family HMM PF02080.


ensembl_gene_id: ACP_0463
symbol: miaB
gene_biotype: protein_coding
description:
  tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: ACP_0464
symbol: ACP_0464
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to PIR:A70326; match to protein family HMM PF02577.


ensembl_gene_id: ACP_0467
symbol: cydB
gene_biotype: protein_coding
description:
  Cytochrome d ubiquinol oxidase, subunit II; Identified by match to protein family HMM PF02322; match to protein family HMM TIGR00203.


ensembl_gene_id: ACP_0468
symbol: ACP_0468
gene_biotype: protein_coding
description:
  Cytochrome d ubiquinol oxidase, subunit I; Identified by match to protein family HMM PF01654; Belongs to the cytochrome ubiquinol oxidase subunit 1 family.


ensembl_gene_id: ACP_0474
symbol: ACP_0474
gene_biotype: protein_coding
description:
  Transcriptional regulator, Crp/Fnr family; Identified by match to protein family HMM PF00027; match to protein family HMM PF00325.


ensembl_gene_id: ACP_0475
symbol: ACP_0475
gene_biotype: protein_coding
description:
  Sigma-54 dependent transcriptional regulator, Fis family; Identified by match to protein family HMM PF00158; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF02954; match to protein family HMM PF07728; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229.


ensembl_gene_id: ACP_0477
symbol: ACP_0477
gene_biotype: protein_coding
description:
  Cytochrome c family protein; Identified by similarity to SP:P46445; match to protein family HMM PF00034.


ensembl_gene_id: ACP_0481
symbol: ACP_0481
gene_biotype: protein_coding
description:
  Phosphate acetyltransferase; Identified by similarity to GB:AAA75486.1; match to protein family HMM PF01515.


ensembl_gene_id: ACP_0485
symbol: ACP_0485
gene_biotype: protein_coding
description:
  Putative thiol-disulfide interchange protein; Identified by match to protein family HMM PF00578; match to protein family HMM PF08534.


ensembl_gene_id: ACP_0486
symbol: ACP_0486
gene_biotype: protein_coding
description:
  Cyclopropane-fatty-acyl-phospholipid synthase; Identified by match to protein family HMM PF02353; match to protein family HMM PF08241; match to protein family HMM PF08242.


ensembl_gene_id: ACP_0488
symbol: ACP_0488
gene_biotype: protein_coding
description:
  TonB family protein; Identified by similarity to GB:AAF04082.1; match to protein family HMM TIGR01352.


ensembl_gene_id: ACP_0489
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: ACP_0490
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: ACP_0491
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: ACP_0492
symbol: ACP_0492
gene_biotype: protein_coding
description:
  Conserved hypothetical protein TIGR00103; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: ACP_0495
symbol: ACP_0495
gene_biotype: protein_coding
description:
  NitT/TauT family transport system permease protein; Identified by match to protein family HMM PF00528.


ensembl_gene_id: ACP_0496
symbol: ACP_0496
gene_biotype: protein_coding
description:
  Sensory box histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF05227.


ensembl_gene_id: ACP_0498
symbol: ACP_0498
gene_biotype: protein_coding
description:
  Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.


ensembl_gene_id: ACP_0499
symbol: ACP_0499
gene_biotype: protein_coding
description:
  Oxidoreductase, NAD-binding; Identified by match to protein family HMM PF01408; match to protein family HMM PF02894.


ensembl_gene_id: ACP_0502
symbol: ACP_0502
gene_biotype: protein_coding
description:
  tolB protein, putative; Identified by similarity to SP:P19935; match to protein family HMM PF07676; match to protein family HMM TIGR02800.


ensembl_gene_id: ACP_0505
symbol: ACP_0505
gene_biotype: protein_coding
description:
  Transporter, MotA/TolQ/ExbB proton channel family; Identified by match to protein family HMM PF01618.


ensembl_gene_id: ACP_0511
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: ACP_0513
symbol: ACP_0513
gene_biotype: protein_coding
description:
  tRNA nucleotidyltransferase/poly(A) polymerase family protein; Identified by match to protein family HMM PF01743; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: ACP_0515
symbol: lpxD1
gene_biotype: protein_coding
description:
  UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: ACP_0517
symbol: ACP_0517
gene_biotype: protein_coding
description:
  Sensory box-containing diguanylate cyclase; Identified by match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF05231; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.


ensembl_gene_id: ACP_0519
symbol: ftcD
gene_biotype: protein_coding
description:
  Glutamate formimidoyltransferase; Identified by match to protein family HMM PF07837; match to protein family HMM TIGR02024.


ensembl_gene_id: ACP_0521
symbol: ACP_0521
gene_biotype: protein_coding
description:
  Conserved hypothetical protein TIGR01033; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033.


ensembl_gene_id: ACP_0524
symbol: ACP_0524
gene_biotype: protein_coding
description:
  Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: ACP_0528
symbol: rsmA
gene_biotype: protein_coding
description:
  Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: ACP_0531
symbol: ruvC
gene_biotype: protein_coding
description:
  Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: ACP_0534
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: ACP_0538
symbol: trmJ
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.


ensembl_gene_id: ACP_0543
symbol: ACP_0543
gene_biotype: protein_coding
description:
  Putative glutamyl-tRNA(Gln) amidotransferase, A subunit; Identified by match to protein family HMM PF01425.


ensembl_gene_id: ACP_0548
symbol: ACP_0548
gene_biotype: protein_coding
description:
  Putative alpha-1,2-mannosidase; Identified by match to protein family HMM PF07971; match to protein family HMM TIGR01180.


ensembl_gene_id: ACP_0552
symbol: ACP_0552
gene_biotype: protein_coding
description:
  Glycosyl hydrolase, family 35; Identified by match to protein family HMM PF01301; match to protein family HMM PF02449.


ensembl_gene_id: ACP_0554
symbol: ACP_0554
gene_biotype: protein_coding
description:
  Glycosyl hydrolase, family 28; Identified by match to protein family HMM PF00295; Belongs to the glycosyl hydrolase 28 family.


ensembl_gene_id: ACP_0555
symbol: rhaT
gene_biotype: protein_coding
description:
  L-rhamnose:proton symporter; Identified by similarity to SP:P27125; match to protein family HMM PF06379.


ensembl_gene_id: ACP_0557
symbol: ACP_0557
gene_biotype: protein_coding
description:
  Putative sugar uptake ABC transporter, solute-binding protein; Identified by match to protein family HMM PF00532; match to protein family HMM PF09339.


ensembl_gene_id: ACP_0558
symbol: rhaD
gene_biotype: protein_coding
description:
  Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659; match to protein family HMM TIGR02632.


ensembl_gene_id: ACP_0560
symbol: rha1
gene_biotype: protein_coding
description:
  Rhamnogalacturonan acetylesterase; Identified by similarity to SP:Q00017; match to protein family HMM PF00657.


ensembl_gene_id: ACP_0571
symbol: ACP_0571
gene_biotype: protein_coding
description:
  TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.


ensembl_gene_id: ACP_0572
symbol: zwf1
gene_biotype: protein_coding
description:
  Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: ACP_0577
symbol: ivlB1
gene_biotype: protein_coding
description:
  Acetolactate synthase, large subunit; Identified by similarity to GB:AAL99356.1; match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; Belongs to the TPP enzyme family.


ensembl_gene_id: ACP_0578
symbol: ACP_0578
gene_biotype: protein_coding
description:
  Putative GDP-6-deoxy-D-lyxo-4-hexulose reductase; Identified by similarity to GB:AAS55712.1; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993.


ensembl_gene_id: ACP_0579
symbol: rfbG
gene_biotype: protein_coding
description:
  CDP-glucose 4,6-dehydratase; Identified by similarity to GB:AAA88700.1; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993; match to protein family HMM TIGR02622.


ensembl_gene_id: ACP_0580
symbol: rfbF
gene_biotype: protein_coding
description:
  Glucose-1-phosphate cytidylyltransferase; Identified by match to protein family HMM PF00483; match to protein family HMM TIGR02623.


ensembl_gene_id: ACP_0581
symbol: gtrB
gene_biotype: protein_coding
description:
  Bactoprenol glucosyl transferase; Identified by similarity to SP:O22007; match to protein family HMM PF00535.


ensembl_gene_id: ACP_0582
symbol: ACP_0582
gene_biotype: protein_coding
description:
  Aminotransferase, DegT/DnrJ/EryC1/StrS family; Identified by match to protein family HMM PF01041; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: ACP_0589
symbol: ACP_0589
gene_biotype: protein_coding
description:
  Zinc-binding alcohol dehydrogenase family protein; Identified by match to protein family HMM PF00107; match to protein family HMM PF08240; match to protein family HMM TIGR02822.


ensembl_gene_id: ACP_0590
symbol: ACP_0590
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:BAD75019.1; match to protein family HMM PF07609.


ensembl_gene_id: ACP_0591
symbol: glyS
gene_biotype: protein_coding
description:
  glycyl-tRNA synthetase, beta subunit; Identified by match to protein family HMM PF02092; match to protein family HMM PF05746; match to protein family HMM TIGR00211.


ensembl_gene_id: ACP_0592
symbol: glyQ
gene_biotype: protein_coding
description:
  glycyl-tRNA synthetase, alpha subunit; Identified by match to protein family HMM PF02091; match to protein family HMM TIGR00388.


ensembl_gene_id: ACP_0595
symbol: ACP_0595
gene_biotype: protein_coding
description:
  Glutamate--ammonia ligase; Identified by match to protein family HMM PF00120; match to protein family HMM PF03951.


ensembl_gene_id: ACP_0601
symbol: ACP_0601
gene_biotype: protein_coding
description:
  ThiF family/MoeZ/MoeB domain protein; Identified by match to protein family HMM PF00899; match to protein family HMM PF05237.


ensembl_gene_id: ACP_0602
symbol: ACP_0602
gene_biotype: protein_coding
description:
  Outer membrane protein, OMP85 family; Identified by match to protein family HMM PF01103; match to protein family HMM PF07244.


ensembl_gene_id: ACP_0604
symbol: ACP_0604
gene_biotype: protein_coding
description:
  Conserved domain protein; Identified by similarity to GB:CAE80296.1; match to protein family HMM PF04357.


ensembl_gene_id: ACP_0606
symbol: ACP_0606
gene_biotype: protein_coding
description:
  Putative 4-hydroxybenzoate polyprenyltransferase; Identified by match to protein family HMM PF01040; match to protein family HMM TIGR01475; Belongs to the UbiA prenyltransferase family.


ensembl_gene_id: ACP_0608
symbol: pheA
gene_biotype: protein_coding
description:
  Prephenate dehydratase; Identified by match to protein family HMM PF00800; match to protein family HMM PF01842.


ensembl_gene_id: ACP_0609
symbol: lon1
gene_biotype: protein_coding
description:
  Endopeptidase LA; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: ACP_0611
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: ACP_0612
symbol: ACP_0612
gene_biotype: protein_coding
description:
  uracil-DNA glycosylase, family 4; Identified by match to protein family HMM PF03167; match to protein family HMM TIGR00758.


ensembl_gene_id: ACP_0613
symbol: coaBC
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: ACP_0615
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: ACP_0617
symbol: ACP_0617
gene_biotype: protein_coding
description:
  Conserved hypothetical protein TIGR00255; Identified by match to protein family HMM PF03755; match to protein family HMM PF08340; match to protein family HMM TIGR00255.


ensembl_gene_id: ACP_0621
symbol: rpoN
gene_biotype: protein_coding
description:
  RNA polymerase sigma-54 factor; Identified by match to protein family HMM PF00309; match to protein family HMM PF04552; match to protein family HMM PF04963; match to protein family HMM TIGR02395.


ensembl_gene_id: ACP_0625
symbol: ACP_0625
gene_biotype: protein_coding
description:
  Osmoprotectant transport system substrate-binding protein; Identified by similarity to SP:O32243; similarity to SP:Q45462; match to protein family HMM PF04069.


ensembl_gene_id: ACP_0626
symbol: ACP_0626
gene_biotype: protein_coding
description:
  Amine ABC transporter, quaternary amine uptake transporter (QAT) family, permease protein; Identified by similarity to SP:O34878; similarity to SP:Q45461; match to protein family HMM PF00528.


ensembl_gene_id: ACP_0627
symbol: ACP_0627
gene_biotype: protein_coding
description:
  Amine ABC transporter, quaternary amine uptake transporter (QAT) family, ATP-binding protein; Identified by similarity to SP:Q45460; match to protein family HMM PF00005.


ensembl_gene_id: ACP_0629
symbol: gap
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase, type I; Identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: ACP_0631
symbol: pgk
gene_biotype: protein_coding
description:
  Phosphoglycerate kinase; Identified by match to protein family HMM PF00162; Belongs to the phosphoglycerate kinase family.


ensembl_gene_id: ACP_0633
symbol: ACP_0633
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:AAM72057.1; match to protein family HMM PF04365.


ensembl_gene_id: ACP_0634
symbol: tpiA
gene_biotype: protein_coding
description:
  Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: ACP_0636
symbol: ACP_0636
gene_biotype: protein_coding
description:
  Phosphodiesterase, MJ0936 family; Identified by match to protein family HMM PF00149; match to protein family HMM TIGR00040.


ensembl_gene_id: ACP_0638
symbol: ACP_0638
gene_biotype: protein_coding
description:
  CBS/transporter domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471.


ensembl_gene_id: ACP_0643
symbol: ACP_0643
gene_biotype: protein_coding
description:
  RNA polymerase sigma-70 factor, ECF subfamily; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: ACP_0647
symbol: recQ
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecQ; Identified by similarity to SP:P15043; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00570; match to protein family HMM TIGR00614.


ensembl_gene_id: ACP_0668
symbol: ACP_0668
gene_biotype: protein_coding
description:
  NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659.


ensembl_gene_id: ACP_0669
symbol: ACP_0669
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF01965.


ensembl_gene_id: ACP_0671
symbol: nadE
gene_biotype: protein_coding
description:
  NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: ACP_0674
symbol: copA1
gene_biotype: protein_coding
description:
  Copper resistance protein A; Identified by similarity to SP:P12374; match to protein family HMM PF00394; match to protein family HMM PF07731; match to protein family HMM PF07732; match to protein family HMM TIGR01409; match to protein family HMM TIGR01480.


ensembl_gene_id: ACP_0677
symbol: atoC
gene_biotype: protein_coding
description:
  Mutant NtrC-like activator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM PF07728.


ensembl_gene_id: ACP_0678
symbol: ACP_0678
gene_biotype: protein_coding
description:
  Sensory box histidine kinase, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM TIGR00229.


ensembl_gene_id: ACP_0680
symbol: nadK
gene_biotype: protein_coding
description:
  NAD(+)/NADH kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: ACP_0681
symbol: ACP_0681
gene_biotype: protein_coding
description:
  Identified by match to protein family HMM PF01479; match to protein family HMM PF01728; match to protein family HMM TIGR00478.


ensembl_gene_id: ACP_0684
symbol: ACP_0684
gene_biotype: protein_coding
description:
  Isoprenylcysteine carboxyl methyltransferase family protein; Identified by match to protein family HMM PF04140.


ensembl_gene_id: ACP_0685
symbol: carB
gene_biotype: protein_coding
description:
  Carbamoyl-phosphate synthase, large subunit; Identified by match to protein family HMM PF00289; match to protein family HMM PF01071; match to protein family HMM PF02142; match to protein family HMM PF02786; match to protein family HMM PF02787; match to protein family HMM PF08443; match to protein family HMM TIGR01369.


ensembl_gene_id: ACP_0686
symbol: carA
gene_biotype: protein_coding
description:
  Carbamoyl-phosphate synthase, small subunit; Identified by match to protein family HMM PF00117; match to protein family HMM PF00988; match to protein family HMM TIGR01368; Belongs to the CarA family.


ensembl_gene_id: ACP_0688
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: ACP_0689
symbol: ACP_0689
gene_biotype: protein_coding
description:
  Peptidase, M20/M25/M40 family; Identified by match to protein family HMM PF01546; match to protein family HMM PF04389; match to protein family HMM PF07687.


ensembl_gene_id: ACP_0691
symbol: ACP_0691
gene_biotype: protein_coding
description:
  Surface polysaccharide biosynthesis protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.


ensembl_gene_id: ACP_0696
symbol: smc
gene_biotype: protein_coding
description:
  Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: ACP_0697
symbol: purC
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazolesuccinocarboxamide synthase; Identified by match to protein family HMM PF01259; match to protein family HMM TIGR00081; Belongs to the SAICAR synthetase family.


ensembl_gene_id: ACP_0700
symbol: ACP_0700
gene_biotype: protein_coding
description:
  Haloacid dehalogenase-like hydrolase domain protein; Identified by match to protein family HMM PF00702.


ensembl_gene_id: ACP_0701
symbol: ACP_0701
gene_biotype: protein_coding
description:
  Transporter, outer bacterial membrane secretin (Secretin) family; Identified by match to protein family HMM PF00263; match to protein family HMM PF07719; Belongs to the bacterial secretin family.


ensembl_gene_id: ACP_0702
symbol: ACP_0702
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:AAO79199.1; match to protein family HMM PF04041.


ensembl_gene_id: ACP_0703
symbol: ACP_0703
gene_biotype: protein_coding
description:
  EAL domain/histidine kinase domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF02518; match to protein family HMM PF07730.


ensembl_gene_id: ACP_0704
symbol: ACP_0704
gene_biotype: protein_coding
description:
  Two-component system response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196.


ensembl_gene_id: ACP_0705
symbol: ACP_0705
gene_biotype: protein_coding
description:
  Putative myo-inositol-1-phosphate synthase; Identified by match to protein family HMM PF01658; match to protein family HMM PF07994.


ensembl_gene_id: ACP_0707
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: ACP_0709
symbol: glgX
gene_biotype: protein_coding
description:
  Glycogen debranching enzyme GlgX; Identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02100; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: ACP_0710
symbol: hemD
gene_biotype: protein_coding
description:
  uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: ACP_0711
symbol: hemC
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: ACP_0712
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: ACP_0716
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: ACP_0718
symbol: anmK
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.


ensembl_gene_id: ACP_0719
symbol: ACP_0719
gene_biotype: protein_coding
description:
  Peptide/nickel transport system substrate-binding protein; Identified by match to protein family HMM PF00496.


ensembl_gene_id: ACP_0720
symbol: groES
gene_biotype: protein_coding
description:
  Chaperonin, 10 kDa; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: ACP_0721
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: ACP_0722
symbol: ACP_0722
gene_biotype: protein_coding
description:
  Iron-sulfur cluster-binding protein, Rieske family; Identified by match to protein family HMM PF00355.


ensembl_gene_id: ACP_0725
symbol: purQ
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]


ensembl_gene_id: ACP_0729
symbol: ACP_0729
gene_biotype: protein_coding
description:
  Putative lipoprotein; Identified by similarity to GB:AAO28202.1; match to protein family HMM PF07715.


ensembl_gene_id: ACP_0733
symbol: fhs
gene_biotype: protein_coding
description:
  Formate--tetrahydrofolate ligase; Identified by match to protein family HMM PF01268; Belongs to the formate--tetrahydrofolate ligase family.


ensembl_gene_id: ACP_0734
symbol: ACP_0734
gene_biotype: protein_coding
description:
  Efflux transporter, RND family; Identified by match to protein family HMM PF00873; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: ACP_0739
symbol: ACP_0739
gene_biotype: protein_coding
description:
  Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM PF08448; match to protein family HMM TIGR00254.


ensembl_gene_id: ACP_0742
symbol: ACP_0742
gene_biotype: protein_coding
description:
  Putative galactosyl transferase CpsE; Identified by similarity to SP:Q04664; match to protein family HMM PF02397; match to protein family HMM TIGR03025.


ensembl_gene_id: ACP_0744
symbol: rfaE
gene_biotype: protein_coding
description:
  Lipopolysaccharide core biosynthesis protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: ACP_0745
symbol: gmhA
gene_biotype: protein_coding
description:
  Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate; Belongs to the SIS family. GmhA subfamily.


ensembl_gene_id: ACP_0746
symbol: rfaD
gene_biotype: protein_coding
description:
  ADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose.


ensembl_gene_id: ACP_0749
symbol: ACP_0749
gene_biotype: protein_coding
description:
  NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993.


ensembl_gene_id: ACP_0750
symbol: tuaD
gene_biotype: protein_coding
description:
  UDP-glucose 6-dehydrogenase; Identified by similarity to SP:O32271; match to protein family HMM PF00070; match to protein family HMM PF00984; match to protein family HMM PF01210; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026.


ensembl_gene_id: ACP_0756
symbol: ACP_0756
gene_biotype: protein_coding
description:
  Cyclic diguanylate phosphodiesterase/diguanylate cyclase; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.


ensembl_gene_id: ACP_0759
symbol: ACP_0759
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:AAV89598.1; match to protein family HMM PF04794.


ensembl_gene_id: ACP_0760
symbol: ACP_0760
gene_biotype: protein_coding
description:
  Regulator of cell autolysis; Identified by match to protein family HMM PF02518; match to protein family HMM PF06580.


ensembl_gene_id: ACP_0762
symbol: ribA
gene_biotype: protein_coding
description:
  GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: ACP_0763
symbol: ACP_0763
gene_biotype: protein_coding
description:
  Putative iron-sulfur cluster binding protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF02754.


ensembl_gene_id: ACP_0765
symbol: etfA
gene_biotype: protein_coding
description:
  Electron transfer flavoprotein, alpha subunit; Identified by match to protein family HMM PF00766; match to protein family HMM PF01012.


ensembl_gene_id: ACP_0774
symbol: ACP_0774
gene_biotype: protein_coding
description:
  Cna protein B-type domain protein; Identified by match to protein family HMM PF05738; match to protein family HMM PF07715.


ensembl_gene_id: ACP_0775
symbol: ACP_0775
gene_biotype: protein_coding
description:
  F5/8 type C domain/sugar binding domain protein; Identified by match to protein family HMM PF00754; match to protein family HMM PF02837.


ensembl_gene_id: ACP_0776
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: ACP_0777
symbol: cas1
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: ACP_0778
symbol: cas4
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas4; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.


ensembl_gene_id: ACP_0779
symbol: csd3
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Csd3 family; Identified by match to protein family HMM PF05107; match to protein family HMM TIGR01595; match to protein family HMM TIGR02589.


ensembl_gene_id: ACP_0781
symbol: ACP_0781
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas5, Dvulg subtype; Identified by match to protein family HMM TIGR01876; match to protein family HMM TIGR02593.


ensembl_gene_id: ACP_0786
symbol: xylE
gene_biotype: protein_coding
description:
  D-xylose:proton symporter; Identified by similarity to SP:P09098; match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00879; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: ACP_0787
symbol: rbsR
gene_biotype: protein_coding
description:
  Putative LacI-family transcriptional regulator; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.


ensembl_gene_id: ACP_0790
symbol: ACP_0790
gene_biotype: protein_coding
description:
  Identified by match to protein family HMM PF00144; match to protein family HMM PF00768; Belongs to the peptidase S11 family.


ensembl_gene_id: ACP_0800
symbol: ACP_0800
gene_biotype: protein_coding
description:
  Putative formamidopyrimidine-DNA glycosylase; Identified by match to protein family HMM PF01149; match to protein family HMM PF06827; match to protein family HMM PF06831; Belongs to the FPG family.


ensembl_gene_id: ACP_0801
symbol: dnaJ-2
gene_biotype: protein_coding
description:
  Chaperone protein, DnaJ family; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between [...]


ensembl_gene_id: ACP_0805
symbol: ACP_0805
gene_biotype: protein_coding
description:
  Glycosyl transferase, group 2 family; Identified by match to protein family HMM PF00535; match to protein family HMM TIGR03472.


ensembl_gene_id: ACP_0812
symbol: ACP_0812
gene_biotype: protein_coding
description:
  Putative phytoene dehydrogenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593; match to protein family HMM TIGR03467.


ensembl_gene_id: ACP_0814
symbol: ACP_0814
gene_biotype: protein_coding
description:
  Phytoene synthase-related protein; Identified by match to protein family HMM PF00494; match to protein family HMM TIGR03464.


ensembl_gene_id: ACP_0818
symbol: ACP_0818
gene_biotype: protein_coding
description:
  NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368; match to protein family HMM PF07993; match to protein family HMM PF08659; match to protein family HMM TIGR03466.


ensembl_gene_id: ACP_0827
symbol: ACP_0827
gene_biotype: protein_coding
description:
  Kinase, GHMP family; Identified by match to protein family HMM PF00288; match to protein family HMM PF08544.


ensembl_gene_id: ACP_0829
symbol: ACP_0829
gene_biotype: protein_coding
description:
  NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.


ensembl_gene_id: ACP_0831
symbol: ACP_0831
gene_biotype: protein_coding
description:
  Glycosyl transferase, WecB/TagA/CpsF family; Identified by match to protein family HMM PF03808; match to protein family HMM TIGR00696; Belongs to the glycosyltransferase 26 family.


ensembl_gene_id: ACP_0837
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.


ensembl_gene_id: ACP_0838
symbol: ACP_0838
gene_biotype: protein_coding
description:
  Oxidoreductase, FAD-dependent; Identified by match to protein family HMM PF01266; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: ACP_0839
symbol: glpF
gene_biotype: protein_coding
description:
  Glycerol uptake facilitator protein; Identified by similarity to SP:P18156; match to protein family HMM PF00230; Belongs to the MIP/aquaporin (TC 1.A.8) family.


ensembl_gene_id: ACP_0842
symbol: ACP_0842
gene_biotype: protein_coding
description:
  Trehalose synthase/probable maltokinase; Identified by match to protein family HMM PF00128; match to protein family HMM TIGR02456; match to protein family HMM TIGR02457.


ensembl_gene_id: ACP_0843
symbol: glgE
gene_biotype: protein_coding
description:
  Alpha-amylase family protein; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.


ensembl_gene_id: ACP_0847
symbol: ltaE
gene_biotype: protein_coding
description:
  Threonine aldolase, low-specificity; Identified by similarity to SP:O07051; similarity to SP:P75823; match to protein family HMM PF00155; match to protein family HMM PF00266; match to protein family HMM PF01212.


ensembl_gene_id: ACP_0848
symbol: ACP_0848
gene_biotype: protein_coding
description:
  Cupin domain protein; Identified by match to protein family HMM PF00190; match to protein family HMM PF07883.


ensembl_gene_id: ACP_0849
symbol: ACP_0849
gene_biotype: protein_coding
description:
  Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368; match to protein family HMM PF07993.


ensembl_gene_id: ACP_0853
symbol: ACP_0853
gene_biotype: protein_coding
description:
  Cna protein B-type domain protein; Identified by match to protein family HMM PF05738; match to protein family HMM TIGR03304.


ensembl_gene_id: ACP_0855
symbol: ACP_0855
gene_biotype: protein_coding
description:
  Amino acid transporter, amino acid-polyamine-organocation (APC) family; Identified by match to protein family HMM PF00324.


ensembl_gene_id: ACP_0856
symbol: ACP_0856
gene_biotype: protein_coding
description:
  Melibiase family/PKD domain protein; Identified by match to protein family HMM PF00801; match to protein family HMM PF02065.


ensembl_gene_id: ACP_0857
symbol: ACP_0857
gene_biotype: protein_coding
description:
  Transcriptional regulator, DeoR family; Identified by match to protein family HMM PF00392; match to protein family HMM PF00455; match to protein family HMM PF08220; match to protein family HMM PF08279.


ensembl_gene_id: ACP_0860
symbol: ACP_0860
gene_biotype: protein_coding
description:
  D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit; Identified by match to protein family HMM PF08013; match to protein family HMM TIGR02810.


ensembl_gene_id: ACP_0861
symbol: ACP_0861
gene_biotype: protein_coding
description:
  Peptidase, M20A family protein; Identified by similarity to SP:P23908; match to protein family HMM PF01546.


ensembl_gene_id: ACP_0864
symbol: ACP_0864
gene_biotype: protein_coding
description:
  Beta-galactosidase; Identified by match to protein family HMM PF02449; match to protein family HMM PF08532.


ensembl_gene_id: ACP_0872
symbol: ACP_0872
gene_biotype: protein_coding
description:
  ABC transporter, permease protein; Identified by match to protein family HMM PF02687; match to protein family HMM TIGR03434.


ensembl_gene_id: ACP_0873
symbol: ACP_0873
gene_biotype: protein_coding
description:
  Transcriptional regulator, PadR family; Identified by match to protein family HMM PF03551; match to protein family HMM TIGR03433.


ensembl_gene_id: ACP_0874
symbol: ACP_0874
gene_biotype: protein_coding
description:
  Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: ACP_0875
symbol: xylS1
gene_biotype: protein_coding
description:
  Alpha-xylosidase; Identified by similarity to SP:Q9P999; match to protein family HMM PF01055; Belongs to the glycosyl hydrolase 31 family.


ensembl_gene_id: ACP_0882
symbol: crtE1
gene_biotype: protein_coding
description:
  Farnesyltranstransferase; Identified by similarity to SP:P22873; match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: ACP_0884
symbol: ACP_0884
gene_biotype: protein_coding
description:
  ABC transporter, lipoprotein translocase (LPT) family, ATP-binding protein; Identified by match to protein family HMM PF00005.


ensembl_gene_id: ACP_0889
symbol: ACP_0889
gene_biotype: protein_coding
description:
  Two-component hybrid sensor and regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM PF08448.


ensembl_gene_id: ACP_0891
symbol: bphP
gene_biotype: protein_coding
description:
  Bacteriophytochrome histidine kinase; Identified by similarity to GB:AAM00282.1; match to protein family HMM PF00360; match to protein family HMM PF00512; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF08446.


ensembl_gene_id: ACP_0893
symbol: ACP_0893
gene_biotype: protein_coding
description:
  Two component regulator propeller/GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM PF07494; match to protein family HMM PF07495; match to protein family HMM TIGR00254.


ensembl_gene_id: ACP_0896
symbol: ACP_0896
gene_biotype: protein_coding
description:
  Acyl-CoA thioesterase I; Identified by similarity to SP:P29679; match to protein family HMM PF00657.


ensembl_gene_id: ACP_0897
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: ACP_0898
symbol: folE
gene_biotype: protein_coding
description:
  GTP cyclohydrolase I; Identified by match to protein family HMM PF01227; match to protein family HMM TIGR00063.


ensembl_gene_id: ACP_0903
symbol: thiD
gene_biotype: protein_coding
description:
  Phosphomethylpyrimidine kinase; Identified by match to protein family HMM PF08543; match to protein family HMM TIGR00097.


ensembl_gene_id: ACP_0904
symbol: rlpA
gene_biotype: protein_coding
description:
  Rare lipoprotein A family protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: ACP_0905
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: ACP_0906
symbol: ACP_0906
gene_biotype: protein_coding
description:
  ABC-type transport system, involved in lipoprotein release, permease components; Identified by match to protein family HMM PF02687.


ensembl_gene_id: ACP_0908
symbol: xynB
gene_biotype: protein_coding
description:
  Xylann 1,4-beta-xylosidase; Identified by similarity to SP:P23552; match to protein family HMM PF01229.


ensembl_gene_id: ACP_0913
symbol: mqnE
gene_biotype: protein_coding
description:
  Conserved hypothetical protein TIGR00423; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate.


ensembl_gene_id: ACP_0916
symbol: ACP_0916
gene_biotype: protein_coding
description:
  BNR/Asp-box repeat domain/two component regulator propeller; Identified by match to protein family HMM PF02012; match to protein family HMM PF07494.


ensembl_gene_id: ACP_0918
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH dehydrogenase I, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: ACP_0919
symbol: amt1
gene_biotype: protein_coding
description:
  Ammonium transporter; Identified by match to protein family HMM PF00909; match to protein family HMM TIGR00836.


ensembl_gene_id: ACP_0920
symbol: ACP_0920
gene_biotype: protein_coding
description:
  Nitrogen regulatory protein P-II; Identified by match to protein family HMM PF00543; Belongs to the P(II) protein family.


ensembl_gene_id: ACP_0921
symbol: glnD
gene_biotype: protein_coding
description:
  protein-P-II uridylyltransferase, putative; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism.


ensembl_gene_id: ACP_0922
symbol: ACP_0922
gene_biotype: protein_coding
description:
  Bacterial signalling protein N terminal repeat/GGDEF/EAL domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM PF03707; match to protein family HMM TIGR00254.


ensembl_gene_id: ACP_0923
symbol: ACP_0923
gene_biotype: protein_coding
description:
  Peptidase, family M28; Identified by match to protein family HMM PF02225; match to protein family HMM PF04253; match to protein family HMM PF04389.


ensembl_gene_id: ACP_0926
symbol: mscL
gene_biotype: protein_coding
description:
  Large conductance mechanosensitive channel protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: ACP_0927
symbol: ACP_0927
gene_biotype: protein_coding
description:
  3-oxoacid CoA-transferase, A subunit; Identified by match to protein family HMM PF01144; match to protein family HMM TIGR02429.


ensembl_gene_id: ACP_0929
symbol: dxnH
gene_biotype: protein_coding
description:
  3-oxoadipate CoA-succinyl transferase, beta subunit; Identified by similarity to GB:CAA51373.1; match to protein family HMM PF01144; match to protein family HMM TIGR02428.


ensembl_gene_id: ACP_0931
symbol: ACP_0931
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase, UvrD/REP family; Identified by match to protein family HMM PF00580; Belongs to the helicase family. UvrD subfamily.


ensembl_gene_id: ACP_0932
symbol: phoU1
gene_biotype: protein_coding
description:
  Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake.


ensembl_gene_id: ACP_0933
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: ACP_0934
symbol: ACP_0934
gene_biotype: protein_coding
description:
  Sensory transduction histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF00989; match to protein family HMM PF02518.


ensembl_gene_id: ACP_0935
symbol: ACP_0935
gene_biotype: protein_coding
description:
  Response regulator DrrA; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.


ensembl_gene_id: ACP_0936
symbol: ACP_0936
gene_biotype: protein_coding
description:
  Two-component response regulator involved in phosphate regulation phoP; Identified by match to protein family HMM PF00072.


ensembl_gene_id: ACP_0937
symbol: ACP_0937
gene_biotype: protein_coding
description:
  Sporulation kinase A, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF08448; match to protein family HMM TIGR00229.


ensembl_gene_id: ACP_0938
symbol: ACP_0938
gene_biotype: protein_coding
description:
  Conserved hypothetical protein TIGR00149; Identified by match to protein family HMM PF01894; match to protein family HMM TIGR00149.


ensembl_gene_id: ACP_0942
symbol: cad
gene_biotype: protein_coding
description:
  Clavaldehyde dehydrogenase; Identified by similarity to GB:AAF86624.1; match to protein family HMM PF00106; match to protein family HMM PF07993; match to protein family HMM PF08659; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: ACP_0944
symbol: moaE
gene_biotype: protein_coding
description:
  Molybdopterin converting factor, subunit 2; Identified by similarity to SP:O31705; match to protein family HMM PF02391; match to protein family HMM PF02597; match to protein family HMM TIGR01682.


ensembl_gene_id: ACP_0945
symbol: ACP_0945
gene_biotype: protein_coding
description:
  Von Willebrand factor type A domain protein; Identified by match to protein family HMM PF00092; match to protein family HMM TIGR03436.


ensembl_gene_id: ACP_0947
symbol: ACP_0947
gene_biotype: protein_coding
description:
  Identified by match to protein family HMM PF00459; Belongs to the inositol monophosphatase superfamily.


ensembl_gene_id: ACP_0948
symbol: ACP_0948
gene_biotype: protein_coding
description:
  Iron-sulfur cluster-binding protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: ACP_0949
symbol: ACP_0949
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: ACP_0950
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase domain protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: ACP_0953
symbol: cyoE
gene_biotype: protein_coding
description:
  Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.


ensembl_gene_id: ACP_0958
symbol: ssb
gene_biotype: protein_coding
description:
  Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: ACP_0960
symbol: cheW
gene_biotype: protein_coding
description:
  Chemotaxis protein CheW; Identified by similarity to SP:P07365; match to protein family HMM PF01584.


ensembl_gene_id: ACP_0962
symbol: cheA
gene_biotype: protein_coding
description:
  Chemotaxis protein CheA; Identified by similarity to SP:P07363; match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF02895.


ensembl_gene_id: ACP_0963
symbol: cheR
gene_biotype: protein_coding
description:
  Chemotaxis protein methyltransferase CheR; Identified by match to protein family HMM PF01739; match to protein family HMM PF03705.


ensembl_gene_id: ACP_0964
symbol: cheD
gene_biotype: protein_coding
description:
  Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: ACP_0968
symbol: cheB
gene_biotype: protein_coding
description:
  Protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: ACP_0970
symbol: cheY
gene_biotype: protein_coding
description:
  Chemotaxis protein CheY; Identified by similarity to SP:P06143; match to protein family HMM PF00072.


ensembl_gene_id: ACP_0974
symbol: ACP_0974
gene_biotype: protein_coding
description:
  Amine oxidase, flavin-containing; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593.


ensembl_gene_id: ACP_0979
symbol: ACP_0979
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family protein; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032.


ensembl_gene_id: ACP_0981
symbol: ACP_0981
gene_biotype: protein_coding
description:
  Identified by match to protein family HMM PF01300; match to protein family HMM TIGR00057; Belongs to the SUA5 family.


ensembl_gene_id: ACP_0986
symbol: pncB
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.


ensembl_gene_id: ACP_0987
symbol: ACP_0987
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: ACP_0988
symbol: ACP_0988
gene_biotype: protein_coding
description:
  Identified by match to protein family HMM PF00150; Belongs to the glycosyl hydrolase 5 (cellulase A) family.


ensembl_gene_id: ACP_0990
symbol: icd2
gene_biotype: protein_coding
description:
  Isocitrate dehydrogenase; Identified by match to protein family HMM PF00180; match to protein family HMM TIGR02924.


ensembl_gene_id: ACP_0995
symbol: ACP_0995
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:CAC41728.1; match to protein family HMM PF05974.


ensembl_gene_id: ACP_1001
symbol: recJ
gene_biotype: protein_coding
description:
  single-stranded-DNA-specific exonuclease RecJ; Identified by match to protein family HMM PF01368; match to protein family HMM PF02272; match to protein family HMM TIGR00644.


ensembl_gene_id: ACP_1004
symbol: ACP_1004
gene_biotype: protein_coding
description:
  Homocysteine S-methyltransferase/methylenetetrahydrofolate reductase; Identified by match to protein family HMM PF02219; match to protein family HMM PF02574.


ensembl_gene_id: ACP_1005
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: ACP_1006
symbol: ACP_1006
gene_biotype: protein_coding
description:
  Cys/Met metabolism PLP-dependent enzyme; Identified by match to protein family HMM PF01053; match to protein family HMM PF01212.


ensembl_gene_id: ACP_1007
symbol: cysK1
gene_biotype: protein_coding
description:
  Cysteine synthase A; Identified by match to protein family HMM PF00291; match to protein family HMM TIGR01136; match to protein family HMM TIGR01139; Belongs to the cysteine synthase/cystathionine beta- synthase family.


ensembl_gene_id: ACP_1009
symbol: ACP_1009
gene_biotype: protein_coding
description:
  N-acetylmuramoyl-L-alanine amidase domain protein; Identified by similarity to SP:P50864; match to protein family HMM PF01520.


ensembl_gene_id: ACP_1013
symbol: fabI
gene_biotype: protein_coding
description:
  Enoyl-[acyl-carrier-protein] reductase; Identified by similarity to SP:P54616; match to protein family HMM PF00106.


ensembl_gene_id: ACP_1015
symbol: ACP_1015
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:AAU47468.1; match to protein family HMM PF03928; Belongs to the UPF0303 family.


ensembl_gene_id: ACP_1016
symbol: ACP_1016
gene_biotype: protein_coding
description:
  Semialdehyde dehydrogenase, NAD binding domain protein; Identified by match to protein family HMM PF01118; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: ACP_1017
symbol: pssA
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--serine O-phosphatidyltransferase; Identified by match to protein family HMM PF01066; match to protein family HMM TIGR00473; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: ACP_1018
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: ACP_1022
symbol: ACP_1022
gene_biotype: protein_coding
description:
  methylmalonyl-CoA epimerase; Identified by similarity to SP:Q96PE7; match to protein family HMM PF00903; match to protein family HMM TIGR03081.


ensembl_gene_id: ACP_1023
symbol: ACP_1023
gene_biotype: protein_coding
description:
  LAO/AO transport system ATPase; Identified by match to protein family HMM PF03308; match to protein family HMM TIGR00750.


ensembl_gene_id: ACP_1025
symbol: acdA
gene_biotype: protein_coding
description:
  acyl-CoA dehydrogenase; Identified by similarity to SP:P45867; match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.


ensembl_gene_id: ACP_1026
symbol: ACP_1026
gene_biotype: protein_coding
description:
  Serine/threonine protein phosphatase, 2C family; Identified by similarity to GB:AAF81068.1; match to protein family HMM PF00481.


ensembl_gene_id: ACP_1027
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: ACP_1028
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: ACP_1029
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: ACP_1030
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: ACP_1031
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family.


ensembl_gene_id: ACP_1032
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase F0, B subunit family; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: ACP_1033
symbol: ACP_1033
gene_biotype: protein_coding
description:
  ATP synthase F0, subunit b; Identified by match to protein family HMM PF00430; Belongs to the ATPase B chain family.


ensembl_gene_id: ACP_1034
symbol: hflX
gene_biotype: protein_coding
description:
  Putative GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: ACP_1035
symbol: hfq
gene_biotype: protein_coding
description:
  Hfq protein; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: ACP_1037
symbol: pgi
gene_biotype: protein_coding
description:
  Glucose-6-phosphate isomerase; Identified by similarity to SP:P11537; match to protein family HMM PF00342; Belongs to the GPI family.


ensembl_gene_id: ACP_1038
symbol: ACP_1038
gene_biotype: protein_coding
description:
  Identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880.


ensembl_gene_id: ACP_1039
symbol: ACP_1039
gene_biotype: protein_coding
description:
  Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Identified by match to protein family HMM PF00483.


ensembl_gene_id: ACP_1044
symbol: ACP_1044
gene_biotype: protein_coding
description:
  Dolichyl-phosphate-mannose-protein mannosyltransferase domain protein; Identified by match to protein family HMM PF02366.


ensembl_gene_id: ACP_1045
symbol: asnB1
gene_biotype: protein_coding
description:
  Asparagine synthase; Identified by match to protein family HMM PF00310; match to protein family HMM PF00733; match to protein family HMM TIGR01536.


ensembl_gene_id: ACP_1047
symbol: fadB
gene_biotype: protein_coding
description:
  Fatty oxidation complex, alpha subunit; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737.


ensembl_gene_id: ACP_1049
symbol: glmU
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine diphosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: ACP_1050
symbol: ACP_1050
gene_biotype: protein_coding
description:
  Sigma-70 domain protein; Identified by match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937.


ensembl_gene_id: ACP_1051
symbol: ACP_1051
gene_biotype: protein_coding
description:
  Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF01966; match to protein family HMM TIGR00277.


ensembl_gene_id: ACP_1052
symbol: ACP_1052
gene_biotype: protein_coding
description:
  Putative pterin-4-alpha-carbinolamine dehydratase; Identified by match to protein family HMM PF01329.


ensembl_gene_id: ACP_1055
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2, programmed frameshift; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: ACP_1061
symbol: malQ
gene_biotype: protein_coding
description:
  4-alpha-glucanotransferase; Identified by match to protein family HMM PF02446; match to protein family HMM TIGR00217.


ensembl_gene_id: ACP_1064
symbol: ACP_1064
gene_biotype: protein_coding
description:
  Putative methyltransferase, TIGR00027 family; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.


ensembl_gene_id: ACP_1065
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: ACP_1066
symbol: ACP_1066
gene_biotype: protein_coding
description:
  DHH family/DHHA1 domain protein; Identified by match to protein family HMM PF01368; match to protein family HMM PF02272.


ensembl_gene_id: ACP_1071
symbol: bxlB1
gene_biotype: protein_coding
description:
  Xylann 1,4-beta-xylosidase; Identified by similarity to GB:CAD48309.1; match to protein family HMM PF00933; match to protein family HMM PF01915.


ensembl_gene_id: ACP_1072
symbol: ACP_1072
gene_biotype: protein_coding
description:
  DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF08281.


ensembl_gene_id: ACP_1073
symbol: ACP_1073
gene_biotype: protein_coding
description:
  Histidine kinase domain protein; Identified by match to protein family HMM PF02518; match to protein family HMM PF07730.


ensembl_gene_id: ACP_1080
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: ACP_1081
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: ACP_1082
symbol: ftsQ
gene_biotype: protein_coding
description:
  Hypothetical protein; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.


ensembl_gene_id: ACP_1086
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: ACP_1087
symbol: ftsW
gene_biotype: protein_coding
description:
  Cell division protein FtsW; Identified by match to protein family HMM PF01098; match to protein family HMM TIGR02614; Belongs to the SEDS family.


ensembl_gene_id: ACP_1088
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: ACP_1089
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: ACP_1090
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: ACP_1091
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: ACP_1092
symbol: ACP_1092
gene_biotype: protein_coding
description:
  Identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM PF03793.


ensembl_gene_id: ACP_1094
symbol: mraW
gene_biotype: protein_coding
description:
  S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: ACP_1095
symbol: mraZ
gene_biotype: protein_coding
description:
  Putative MraZ protein; Identified by match to protein family HMM PF02381; Belongs to the MraZ family.


ensembl_gene_id: ACP_1098
symbol: ACP_1098
gene_biotype: protein_coding
description:
  TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07720.


ensembl_gene_id: ACP_1099
symbol: ACP_1099
gene_biotype: protein_coding
description:
  Deoxyguanosinetriphosphate triphosphohydrolase, putative; Identified by match to protein family HMM PF01966; match to protein family HMM TIGR01353; Belongs to the dGTPase family. Type 2 subfamily.


ensembl_gene_id: ACP_1104
symbol: ACP_1104
gene_biotype: protein_coding
description:
  Type IV prepilin leader peptidase family protein; Identified by match to protein family HMM PF01478.


ensembl_gene_id: ACP_1105
symbol: ACP_1105
gene_biotype: protein_coding
description:
  Putative flp pilus assembly protein CpaB; Identified by match to protein family HMM PF08666; match to protein family HMM TIGR03177.


ensembl_gene_id: ACP_1106
symbol: ACP_1106
gene_biotype: protein_coding
description:
  Type II/III secretion system protein; Identified by similarity to GB:CAE29119.1; match to protein family HMM PF00263; match to protein family HMM PF04972; match to protein family HMM TIGR01409; Belongs to the bacterial secretin family.


ensembl_gene_id: ACP_1109
symbol: ACP_1109
gene_biotype: protein_coding
description:
  Bacterial type II secretion system protein F domain protein; Identified by match to protein family HMM PF00482.


ensembl_gene_id: ACP_1117
symbol: leuS
gene_biotype: protein_coding
description:
  leucine--tRNA ligase; Identified by match to protein family HMM PF00133; match to protein family HMM PF08264; match to protein family HMM PF09334; match to protein family HMM TIGR00396; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: ACP_1118
symbol: nfo
gene_biotype: protein_coding
description:
  Deoxyribonuclease IV (phage-T(4)-induced); Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.


ensembl_gene_id: ACP_1119
symbol: nagA
gene_biotype: protein_coding
description:
  N-acetylglucosamine-6-phosphate deacetylase; Identified by match to protein family HMM PF01979; match to protein family HMM TIGR00221.


ensembl_gene_id: ACP_1123
symbol: ACP_1123
gene_biotype: protein_coding
description:
  Identified by match to protein family HMM PF01263; Belongs to the glucose-6-phosphate 1-epimerase family.


ensembl_gene_id: ACP_1125
symbol: eda
gene_biotype: protein_coding
description:
  2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; Identified by match to protein family HMM PF01081; match to protein family HMM TIGR01182.


ensembl_gene_id: ACP_1126
symbol: ACP_1126
gene_biotype: protein_coding
description:
  Starvation sensing protein rspA; Identified by match to protein family HMM PF01188; match to protein family HMM PF02746.


ensembl_gene_id: ACP_1128
symbol: gno
gene_biotype: protein_coding
description:
  Gluconate 5-dehydrogenase; Identified by similarity to SP:P50199; match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659.


ensembl_gene_id: ACP_1129
symbol: ACP_1129
gene_biotype: protein_coding
description:
  Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: ACP_1130
symbol: ACP_1130
gene_biotype: protein_coding
description:
  RND efflux system, permease protein, HAE1/HME family; Identified by match to protein family HMM PF00873; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: ACP_1153
symbol: ACP_1153
gene_biotype: protein_coding
description:
  Pyridoxal-phosphate dependent enzyme/ornithine cyclodeaminase family protein; Identified by match to protein family HMM PF00291; match to protein family HMM PF02423.


ensembl_gene_id: ACP_1155
symbol: ACP_1155
gene_biotype: protein_coding
description:
  Identified by match to protein family HMM PF00106; match to protein family HMM PF00296; match to protein family HMM PF00550; match to protein family HMM PF01370; match to protein family HMM PF08659.


ensembl_gene_id: ACP_1157
symbol: ACP_1157
gene_biotype: protein_coding
description:
  Polyketide synthase peptide synthetase fusion protein; Identified by match to protein family HMM PF00109; match to protein family HMM PF00202; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF00698; match to protein family HMM PF02801; match to protein family HMM TIGR01733.


ensembl_gene_id: ACP_1162
symbol: ACP_1162
gene_biotype: protein_coding
description:
  Nonribosomal peptide synthetase; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF00975; match to protein family HMM TIGR01733.


ensembl_gene_id: ACP_1165
symbol: mtaA
gene_biotype: protein_coding
description:
  4'-phosphopantetheinyl transferase MtaA; Identified by similarity to GB:AAF19809.1; match to protein family HMM PF01648; Belongs to the P-Pant transferase superfamily.


ensembl_gene_id: ACP_1173
symbol: ACP_1173
gene_biotype: protein_coding
description:
  Collagen triple helix repeat protein; Identified by match to protein family HMM PF01391; match to protein family HMM PF02839.


ensembl_gene_id: ACP_1190
symbol: ACP_1190
gene_biotype: protein_coding
description:
  Single-strand binding protein subfamily, putative; Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621.


ensembl_gene_id: ACP_1191
symbol: ACP_1191
gene_biotype: protein_coding
description:
  Transporter, type IV (conjugal DNA-protein transfer or VirB) secretory pathway (IVSP) family; Identified by match to protein family HMM PF00437.


ensembl_gene_id: ACP_1195
symbol: ACP_1195
gene_biotype: protein_coding
description:
  Conjugative relaxase domain protein; Identified by match to protein family HMM PF08751; match to protein family HMM TIGR02686.


ensembl_gene_id: ACP_1197
symbol: ACP_1197
gene_biotype: protein_coding
description:
  Conserved domain protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242.


ensembl_gene_id: ACP_1199
symbol: ACP_1199
gene_biotype: protein_coding
description:
  Heavy metal translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525.


ensembl_gene_id: ACP_1201
symbol: ACP_1201
gene_biotype: protein_coding
description:
  Electron transporter, disulfide bond oxidoreductase D (DsbD) family; Identified by match to protein family HMM PF02683.


ensembl_gene_id: ACP_1202
symbol: cusA1
gene_biotype: protein_coding
description:
  Heavy metal efflux RND transporter CusA; Identified by similarity to SP:P38054; match to protein family HMM PF00873; match to protein family HMM TIGR00914; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: ACP_1203
symbol: cusB1
gene_biotype: protein_coding
description:
  Heavy metal efflux RND transporter, MFP subunit CusB; Identified by similarity to SP:P77239; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: ACP_1211
symbol: ACP_1211
gene_biotype: protein_coding
description:
  Copper-exporting ATPase; Identified by similarity to SP:P37279; match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM PF04945; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525.


ensembl_gene_id: ACP_1212
symbol: ACP_1212
gene_biotype: protein_coding
description:
  Sigma-70 factor domain protein; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: ACP_1217
symbol: ACP_1217
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:AAL23323.1; match to protein family HMM PF03625.


ensembl_gene_id: ACP_1219
symbol: ACP_1219
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: ACP_1224
symbol: ACP_1224
gene_biotype: protein_coding
description:
  Putative partition protein; Identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; Belongs to the ParB family.


ensembl_gene_id: ACP_1225
symbol: ACP_1225
gene_biotype: protein_coding
description:
  Transcriptional regulator, MerR family; Identified by match to protein family HMM PF00376; match to protein family HMM PF09278.


ensembl_gene_id: ACP_1229
symbol: ACP_1229
gene_biotype: protein_coding
description:
  Pyridine nucleotide-disulphide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992.


ensembl_gene_id: ACP_1230
symbol: merP
gene_biotype: protein_coding
description:
  Mercuric transport protein periplasmic component; Involved in mercury resistance. Acts as a mercury scavenger that specifically binds to a mercuric ion in the periplasm and probably passes it to the cytoplasmic mercuric reductase MerA via the mercuric transport protein MerT.


ensembl_gene_id: ACP_1232
symbol: ACP_1232
gene_biotype: protein_coding
description:
  Probable transcription regulator PA5029, putative; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: ACP_1238
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: ACP_1241
symbol: ACP_1241
gene_biotype: protein_coding
description:
  Identified by match to protein family HMM PF02449; match to protein family HMM PF08532; match to protein family HMM PF08533.


ensembl_gene_id: ACP_1242
symbol: ompA
gene_biotype: protein_coding
description:
  Outer membrane protein A; Identified by similarity to SP:Q05146; match to protein family HMM PF00691.


ensembl_gene_id: ACP_1243
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: ACP_1251
symbol: ACP_1251
gene_biotype: protein_coding
description:
  Non-specific serine/threonine protein kinase; Identified by similarity to PDB:1MRU_A; match to protein family HMM PF00069.


ensembl_gene_id: ACP_1252
symbol: ACP_1252
gene_biotype: protein_coding
description:
  Ammonium transporter, ammonium transporter (Amt) family; Identified by similarity to SP:Q07429; match to protein family HMM PF00909.


ensembl_gene_id: ACP_1253
symbol: ACP_1253
gene_biotype: protein_coding
description:
  Transporter, CPA2 family; Identified by similarity to SP:P26235; match to protein family HMM PF00999.


ensembl_gene_id: ACP_1260
symbol: ACP_1260
gene_biotype: protein_coding
description:
  Sensor histidine kinase, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.


ensembl_gene_id: ACP_1263
symbol: ACP_1263
gene_biotype: protein_coding
description:
  Glycosyl hydrolase, family 2; Identified by match to protein family HMM PF00703; match to protein family HMM PF02837.


ensembl_gene_id: ACP_1264
symbol: ACP_1264
gene_biotype: protein_coding
description:
  The CAT family is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily; identified by match to protein family HMM PF00324.


ensembl_gene_id: ACP_1269
symbol: ACP_1269
gene_biotype: protein_coding
description:
  Tat pathway signal sequence domain protein; Identified by match to protein family HMM PF07944; match to protein family HMM TIGR01409.


ensembl_gene_id: ACP_1272
symbol: ACP_1272
gene_biotype: protein_coding
description:
  3-deoxy-7-phosphoheptulonate synthase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).


ensembl_gene_id: ACP_1273
symbol: ACP_1273
gene_biotype: protein_coding
description:
  ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: ACP_1280
symbol: ACP_1280
gene_biotype: protein_coding
description:
  Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106; match to protein family HMM PF08659; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: ACP_1283
symbol: ACP_1283
gene_biotype: protein_coding
description:
  NADH-dependent oxidoreductase, oye family; Identified by similarity to GB:AAF02539.1; match to protein family HMM PF00724.


ensembl_gene_id: ACP_1287
symbol: ACP_1287
gene_biotype: protein_coding
description:
  TonB-dependent receptor; Identified by similarity to SP:P38370; match to protein family HMM PF07715.


ensembl_gene_id: ACP_1291
symbol: ACP_1291
gene_biotype: protein_coding
description:
  Two component regulator propeller/histidine kinase domain protein; Identified by match to protein family HMM PF02518; match to protein family HMM PF07494; match to protein family HMM PF07495; match to protein family HMM PF07730.


ensembl_gene_id: ACP_1292
symbol: ACP_1292
gene_biotype: protein_coding
description:
  DNA-binding response regulator, LuxR family; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196.


ensembl_gene_id: ACP_1295
symbol: ACP_1295
gene_biotype: protein_coding
description:
  Limonene-1,2-epoxide hydrolase catalytic domain protein; Identified by match to protein family HMM PF07858.


ensembl_gene_id: ACP_1300
symbol: ACP_1300
gene_biotype: protein_coding
description:
  Peptidase, S53 family; Identified by similarity to SP:P42790; match to protein family HMM PF00082; match to protein family HMM PF09286.


ensembl_gene_id: ACP_1302
symbol: ACP_1302
gene_biotype: protein_coding
description:
  Putative transcriptional regulatory protein; Identified by similarity to SP:P43015; match to protein family HMM PF00486; match to protein family HMM PF07719.


ensembl_gene_id: ACP_1304
symbol: ACP_1304
gene_biotype: protein_coding
description:
  ISAca5, transposase; Identified by match to protein family HMM PF01548; match to protein family HMM PF02371.


ensembl_gene_id: ACP_1307
symbol: ACP_1307
gene_biotype: protein_coding
description:
  The Drug:H+ Antiporter-2 (14 Spanner) (DHA2) Family is a member of the Major Facilitator Superfamily (MFS); identified by match to protein family HMM PF07690.


ensembl_gene_id: ACP_1310
symbol: ACP_1310
gene_biotype: protein_coding
description:
  Tetratricopeptide repeat protein; Identified by similarity to PIR:F95305; match to protein family HMM PF07719.


ensembl_gene_id: ACP_1312
symbol: ACP_1312
gene_biotype: protein_coding
description:
  RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: ACP_1313
symbol: ACP_1313
gene_biotype: protein_coding
description:
  Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992.


ensembl_gene_id: ACP_1320
symbol: mdlC
gene_biotype: protein_coding
description:
  Benzoylformate decarboxylase; Identified by similarity to SP:P20906; match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; Belongs to the TPP enzyme family.


ensembl_gene_id: ACP_1322
symbol: ACP_1322
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase (NAD) family protein; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: ACP_1323
symbol: ACP_1323
gene_biotype: protein_coding
description:
  Two-component system sensor protein, putative; Identified by match to protein family HMM PF02518; match to protein family HMM PF07494; match to protein family HMM PF07495; match to protein family HMM PF07730.


ensembl_gene_id: ACP_1324
symbol: ACP_1324
gene_biotype: protein_coding
description:
  Two-component system regulatory protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF08279; match to protein family HMM PF08281.


ensembl_gene_id: ACP_1337
symbol: ACP_1337
gene_biotype: protein_coding
description:
  GAF domain/GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00254.


ensembl_gene_id: ACP_1342
symbol: ACP_1342
gene_biotype: protein_coding
description:
  Transporter, hydrophobe/amphiphile efflux-1 family; Identified by match to protein family HMM PF00873; match to protein family HMM TIGR00915; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: ACP_1343
symbol: oprM
gene_biotype: protein_coding
description:
  Outer membrane efflux protein OprM; Identified by similarity to SP:Q51487; match to protein family HMM PF02321; match to protein family HMM TIGR01845.


ensembl_gene_id: ACP_1344
symbol: ACP_1344
gene_biotype: protein_coding
description:
  Transcription regulators of NagC/XylR family, sugar kinase, putative; Identified by match to protein family HMM PF01869.


ensembl_gene_id: ACP_1345
symbol: ACP_1345
gene_biotype: protein_coding
description:
  Transporter, major facilitator superfamily; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.


ensembl_gene_id: ACP_1346
symbol: ACP_1346
gene_biotype: protein_coding
description:
  Beta-galactosidase; Identified by similarity to GB:BAA21669.1; match to protein family HMM PF01301; match to protein family HMM PF02449.


ensembl_gene_id: ACP_1349
symbol: cutC
gene_biotype: protein_coding
description:
  Copper homeostasis protein CutC; Participates in the control of copper homeostasis. Belongs to the CutC family.


ensembl_gene_id: ACP_1354
symbol: ACP_1354
gene_biotype: protein_coding
description:
  FG-GAP repeat protein; Identified by match to protein family HMM PF01839; match to protein family HMM PF07593.


ensembl_gene_id: ACP_1355
symbol: ACP_1355
gene_biotype: protein_coding
description:
  Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.


ensembl_gene_id: ACP_1361
symbol: ACP_1361
gene_biotype: protein_coding
description:
  UDP-sulfoquinovose synthase; Identified by similarity to SP:O48917; match to protein family HMM PF01370.


ensembl_gene_id: ACP_1369
symbol: ACP_1369
gene_biotype: protein_coding
description:
  Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730.


ensembl_gene_id: ACP_1370
symbol: ACP_1370
gene_biotype: protein_coding
description:
  Efflux ABC transporter, macrolide exporter (MacB) family, ATP-binding protein; Identified by match to protein family HMM PF00005.


ensembl_gene_id: ACP_1372
symbol: purM
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine cyclo-ligase; Identified by similarity to SP:P12043; match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR00878.


ensembl_gene_id: ACP_1375
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: ACP_1376
symbol: ACP_1376
gene_biotype: protein_coding
description:
  Cyclic nucleotide-binding domain protein; Identified by match to protein family HMM PF00027; match to protein family HMM PF06210.


ensembl_gene_id: ACP_1379
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: ACP_1380
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: ACP_1382
symbol: rsfS
gene_biotype: protein_coding
description:
  Iojap family protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: ACP_1387
symbol: ACP_1387
gene_biotype: protein_coding
description:
  Pyridine nucleotide-disulphide oxidoreductase family protein; Identified by match to protein family HMM PF07992.


ensembl_gene_id: ACP_1389
symbol: dnaB
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: ACP_1390
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: ACP_1391
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase II; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist  [...]


ensembl_gene_id: ACP_1397
symbol: ACP_1397
gene_biotype: protein_coding
description:
  Efflux ABC transporter, macrolide exporter (MacB) family, permease protein; Identified by match to protein family HMM PF02687; match to protein family HMM TIGR03434.


ensembl_gene_id: ACP_1401
symbol: ilvA
gene_biotype: protein_coding
description:
  Threonine ammonia-lyase; Identified by match to protein family HMM PF00291; match to protein family HMM PF01842; match to protein family HMM TIGR01127.


ensembl_gene_id: ACP_1404
symbol: ACP_1404
gene_biotype: protein_coding
description:
  Drug resistance transporter, EmrB/QacA subfamily; Identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; Belongs to the major facilitator superfamily.


ensembl_gene_id: ACP_1407
symbol: ACP_1407
gene_biotype: protein_coding
description:
  RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family, permease protein; Identified by match to protein family HMM PF00873; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: ACP_1408
symbol: ACP_1408
gene_biotype: protein_coding
description:
  Efflux transporter, RND family, MFP subunit; Identified by similarity to SP:P37636; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: ACP_1412
symbol: ACP_1412
gene_biotype: protein_coding
description:
  Methyltransferase, UbiE/COQ5 family; Identified by match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242.


ensembl_gene_id: ACP_1417
symbol: ACP_1417
gene_biotype: protein_coding
description:
  RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: ACP_1420
symbol: ACP_1420
gene_biotype: protein_coding
description:
  Hydrolase, alpha/beta fold family/4-carboxymuconolactone decarboxylase family protein; Identified by match to protein family HMM PF00561; match to protein family HMM PF02627.


ensembl_gene_id: ACP_1422
symbol: rplQ
gene_biotype: protein_coding
description:
  Ribosomal protein L17; Identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059.


ensembl_gene_id: ACP_1423
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: ACP_1424
symbol: rpsD
gene_biotype: protein_coding
description:
  Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: ACP_1425
symbol: rpsK
gene_biotype: protein_coding
description:
  Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: ACP_1426
symbol: rpsM
gene_biotype: protein_coding
description:
  Ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: ACP_1427
symbol: rpmJ
gene_biotype: protein_coding
description:
  Ribosomal protein L36; Identified by match to protein family HMM PF00444; match to protein family HMM TIGR01022; Belongs to the bacterial ribosomal protein bL36 family.


ensembl_gene_id: ACP_1428
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: ACP_1429
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: ACP_1430
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: ACP_1431
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: ACP_1432
symbol: rplO
gene_biotype: protein_coding
description:
  Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: ACP_1433
symbol: rpmD
gene_biotype: protein_coding
description:
  Ribosomal protein L30; Identified by match to protein family HMM PF00327; match to protein family HMM TIGR01308.


ensembl_gene_id: ACP_1434
symbol: rpsE
gene_biotype: protein_coding
description:
  Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: ACP_1435
symbol: rplR
gene_biotype: protein_coding
description:
  Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: ACP_1436
symbol: rplF
gene_biotype: protein_coding
description:
  Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: ACP_1437
symbol: rpsH
gene_biotype: protein_coding
description:
  Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: ACP_1438
symbol: rpsN
gene_biotype: protein_coding
description:
  Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.


ensembl_gene_id: ACP_1439
symbol: rplE
gene_biotype: protein_coding
description:
  Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: ACP_1440
symbol: rplX
gene_biotype: protein_coding
description:
  Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: ACP_1441
symbol: rplN
gene_biotype: protein_coding
description:
  Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: ACP_1442
symbol: rpsQ
gene_biotype: protein_coding
description:
  Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: ACP_1443
symbol: rpmC
gene_biotype: protein_coding
description:
  Ribosomal protein L29; Identified by match to protein family HMM PF00831; match to protein family HMM TIGR00012; Belongs to the universal ribosomal protein uL29 family.


ensembl_gene_id: ACP_1444
symbol: rplP
gene_biotype: protein_coding
description:
  Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: ACP_1445
symbol: rpsC
gene_biotype: protein_coding
description:
  Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: ACP_1446
symbol: rplV
gene_biotype: protein_coding
description:
  Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: ACP_1447
symbol: rpsS
gene_biotype: protein_coding
description:
  Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: ACP_1448
symbol: rplB
gene_biotype: protein_coding
description:
  Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: ACP_1449
symbol: rplW
gene_biotype: protein_coding
description:
  Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: ACP_1450
symbol: rplD
gene_biotype: protein_coding
description:
  Ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.


ensembl_gene_id: ACP_1451
symbol: rplC
gene_biotype: protein_coding
description:
  Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: ACP_1452
symbol: rpsJ
gene_biotype: protein_coding
description:
  Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: ACP_1453
symbol: tuf
gene_biotype: protein_coding
description:
  Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: ACP_1454
symbol: fusA
gene_biotype: protein_coding
description:
  Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]


ensembl_gene_id: ACP_1455
symbol: rpsG
gene_biotype: protein_coding
description:
  Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: ACP_1458
symbol: ACP_1458
gene_biotype: protein_coding
description:
  Peptidase, S9C (acylaminoacyl-peptidase) family; Identified by match to protein family HMM PF00326; match to protein family HMM PF02129.


ensembl_gene_id: ACP_1461
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional regulator, NrdR family; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: ACP_1462
symbol: ACP_1462
gene_biotype: protein_coding
description:
  Putative isocitrate dehydrogenase, NAD-dependent; Identified by match to protein family HMM PF00180.


ensembl_gene_id: ACP_1463
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Identified by match to protein family HMM PF01118; match to protein family HMM PF02774; match to protein family HMM TIGR00978; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: ACP_1464
symbol: ACP_1464
gene_biotype: protein_coding
description:
  Aspartate kinase; Identified by match to protein family HMM PF00696; match to protein family HMM PF01842; match to protein family HMM TIGR00657; Belongs to the aspartokinase family.


ensembl_gene_id: ACP_1466
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Identified by similarity to SP:P04036; match to protein family HMM PF01113; match to protein family HMM PF05173; match to protein family HMM TIGR00036; Belongs to the DapB family.


ensembl_gene_id: ACP_1467
symbol: dapA1
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: ACP_1468
symbol: ACP_1468
gene_biotype: protein_coding
description:
  Putative 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family.


ensembl_gene_id: ACP_1469
symbol: rnj
gene_biotype: protein_coding
description:
  Metallo-beta-lactamase family protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: ACP_1470
symbol: tdcB
gene_biotype: protein_coding
description:
  Threonine dehydratase catabolic; Identified by similarity to SP:P05792; match to protein family HMM PF00291.


ensembl_gene_id: ACP_1474
symbol: ACP_1474
gene_biotype: protein_coding
description:
  Two-component hybrid sensor and regulator, putative; Identified by match to protein family HMM PF00072; match to protein family HMM PF01627.


ensembl_gene_id: ACP_1475
symbol: ACP_1475
gene_biotype: protein_coding
description:
  DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196.


ensembl_gene_id: ACP_1477
symbol: ACP_1477
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydrogenase NAD-binding domain protein; Identified by match to protein family HMM PF03446.


ensembl_gene_id: ACP_1482
symbol: ACP_1482
gene_biotype: protein_coding
description:
  Putative daunorubicin resistance ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.


ensembl_gene_id: ACP_1485
symbol: ACP_1485
gene_biotype: protein_coding
description:
  Sensor histidine kinase, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF08448; match to protein family HMM TIGR00229.


ensembl_gene_id: ACP_1486
symbol: ACP_1486
gene_biotype: protein_coding
description:
  Pyridine nucleotide-disulfide oxidoreductase family; Identified by match to protein family HMM PF03486; match to protein family HMM PF07992.


ensembl_gene_id: ACP_1487
symbol: aspA
gene_biotype: protein_coding
description:
  Aspartate ammonia-lyase; Identified by similarity to SP:P26899; match to protein family HMM PF00206.


ensembl_gene_id: ACP_1490
symbol: ACP_1490
gene_biotype: protein_coding
description:
  Exopolysaccharide biosynthesis protein; Identified by similarity to SP:Q04973; match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.


ensembl_gene_id: ACP_1491
symbol: ACP_1491
gene_biotype: protein_coding
description:
  Identified by match to protein family HMM PF00984; match to protein family HMM PF03446; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: ACP_1497
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: ACP_1498
symbol: purS
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase, purS protein; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought [...]


ensembl_gene_id: ACP_1499
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic diphosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: ACP_1502
symbol: czcA
gene_biotype: protein_coding
description:
  Heavy metal efflux pump, CzcA family; Identified by similarity to SP:P94177; match to protein family HMM PF00873; match to protein family HMM TIGR00914; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: ACP_1503
symbol: ACP_1503
gene_biotype: protein_coding
description:
  Heavy metal efflux transporter, RND family, MFP subunit; Identified by similarity to SP:P13510; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: ACP_1504
symbol: ACP_1504
gene_biotype: protein_coding
description:
  Efflux transporter, outer membrane factor (OMF) family; Identified by match to protein family HMM PF02321.


ensembl_gene_id: ACP_1508
symbol: ACP_1508
gene_biotype: protein_coding
description:
  FG-GAP repeat protein/ASPIC/UnbV domain protein; Identified by match to protein family HMM PF01839; match to protein family HMM PF07593.


ensembl_gene_id: ACP_1509
symbol: ACP_1509
gene_biotype: protein_coding
description:
  Cation transport ATPase (P-type) family, type IIA subfamily; Identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494.


ensembl_gene_id: ACP_1514
symbol: ACP_1514
gene_biotype: protein_coding
description:
  Putative membrane protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: ACP_1516
symbol: ACP_1516
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:CAI06201.1; match to protein family HMM PF02586; Belongs to the SOS response-associated peptidase family.


ensembl_gene_id: ACP_1519
symbol: dnaE1
gene_biotype: protein_coding
description:
  DNA polymerase III, alpha subunit; Identified by similarity to SP:O34623; match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594; Belongs to the DNA polymerase type-C family. DnaE2 subfamily.


ensembl_gene_id: ACP_1522
symbol: ACP_1522
gene_biotype: protein_coding
description:
  ABC transporter, macrolide exporter (MacB) family, permease protein; Identified by match to protein family HMM PF02687; match to protein family HMM TIGR03434.


ensembl_gene_id: ACP_1523
symbol: ACP_1523
gene_biotype: protein_coding
description:
  Transcriptional regulator, PadR family, putative; Identified by match to protein family HMM PF03551; match to protein family HMM TIGR03433.


ensembl_gene_id: ACP_1524
symbol: ACP_1524
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to PIR:S76628; match to protein family HMM PF05685.


ensembl_gene_id: ACP_1526
symbol: ACP_1526
gene_biotype: protein_coding
description:
  Putative permease; Identified by match to protein family HMM PF02687; match to protein family HMM TIGR03434.


ensembl_gene_id: ACP_1528
symbol: ACP_1528
gene_biotype: protein_coding
description:
  Permease, putative domain protein; Identified by match to protein family HMM PF02687; match to protein family HMM TIGR03434.


ensembl_gene_id: ACP_1531
symbol: ACP_1531
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error.


ensembl_gene_id: ACP_1536
symbol: ACP_1536
gene_biotype: protein_coding
description:
  Putative type I restriction-modification system, M subunit; Identified by match to protein family HMM PF02384.


ensembl_gene_id: ACP_1537
symbol: hsdS
gene_biotype: protein_coding
description:
  Type I restriction-modification system, S subunit; Identified by match to protein family HMM PF01420.


ensembl_gene_id: ACP_1538
symbol: hsdR
gene_biotype: protein_coding
description:
  Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.


ensembl_gene_id: ACP_1540
symbol: ACP_1540
gene_biotype: protein_coding
description:
  ThiF domain protein; Identified by similarity to GB:BAC59348.1; match to protein family HMM PF00899.


ensembl_gene_id: ACP_1543
symbol: ACP_1543
gene_biotype: protein_coding
description:
  Conserved domain protein; Identified by similarity to GB:CAD86450.1; match to protein family HMM PF06114.


ensembl_gene_id: ACP_1559
symbol: ACP_1559
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:BAC89307.1; match to protein family HMM PF05685.


ensembl_gene_id: ACP_1565
symbol: ACP_1565
gene_biotype: protein_coding
description:
  Sensory box sensor histidine kinase/response regulator, putative; Identified by match to protein family HMM PF02518.


ensembl_gene_id: ACP_1570
symbol: ACP_1570
gene_biotype: protein_coding
description:
  ISAca4, transposase orfB; The stop site for this ORF lies outside the terminus of the IS element; identified by match to protein family HMM PF00665.


ensembl_gene_id: ACP_1585
symbol: ACP_1585
gene_biotype: protein_coding
description:
  Conserved hypothetical protein TIGR00726; Identified by match to protein family HMM PF02578; match to protein family HMM TIGR00726; Belongs to the multicopper oxidase YfiH/RL5 family.


ensembl_gene_id: ACP_1586
symbol: ACP_1586
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: ACP_1591
symbol: ACP_1591
gene_biotype: protein_coding
description:
  Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106; match to protein family HMM PF08659.


ensembl_gene_id: ACP_1599
symbol: ACP_1599
gene_biotype: protein_coding
description:
  Efflux transporter, RND family, MFP subunit; Identified by similarity to SP:P75830; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: ACP_1601
symbol: lolD1
gene_biotype: protein_coding
description:
  Lipoprotein-releasing system, ATP-binding protein LolD; Identified by match to protein family HMM PF00005.


ensembl_gene_id: ACP_1606
symbol: rfaC
gene_biotype: protein_coding
description:
  Lipopolysaccharide heptosyltransferase I; Identified by match to protein family HMM PF01075; match to protein family HMM TIGR02193.


ensembl_gene_id: ACP_1607
symbol: lpxK
gene_biotype: protein_coding
description:
  Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: ACP_1608
symbol: waaA
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: ACP_1610
symbol: icsS1
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Identified by similarity to SP:O54055; match to protein family HMM PF00266; match to protein family HMM PF01212.


ensembl_gene_id: ACP_1611
symbol: ACP_1611
gene_biotype: protein_coding
description:
  Peptidase, M50 family; Identified by match to protein family HMM PF00595; match to protein family HMM PF02163; match to protein family HMM TIGR00054.


ensembl_gene_id: ACP_1612
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: ACP_1613
symbol: cdsA
gene_biotype: protein_coding
description:
  Phosphatidate cytidylyltransferase; Identified by match to protein family HMM PF01148; Belongs to the CDS family.


ensembl_gene_id: ACP_1615
symbol: gltX1
gene_biotype: protein_coding
description:
  glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: ACP_1616
symbol: ispF
gene_biotype: protein_coding
description:
  2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: ACP_1617
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: ACP_1620
symbol: bshC
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:BAD41574.1; Belongs to the BshC family.


ensembl_gene_id: ACP_1624
symbol: ACP_1624
gene_biotype: protein_coding
description:
  PHP domain protein; Identified by match to protein family HMM PF00633; match to protein family HMM PF02811.


ensembl_gene_id: ACP_1627
symbol: uppS
gene_biotype: protein_coding
description:
  Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: ACP_1628
symbol: hupA1
gene_biotype: protein_coding
description:
  DNA-binding protein HU 1; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: ACP_1634
symbol: ACP_1634
gene_biotype: protein_coding
description:
  Prolyl endopeptidase; Identified by similarity to SP:Q06903; match to protein family HMM PF00326; match to protein family HMM PF02897.


ensembl_gene_id: ACP_1638
symbol: ACP_1638
gene_biotype: protein_coding
description:
  Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.


ensembl_gene_id: ACP_1640
symbol: ACP_1640
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to PIR:C81975; match to protein family HMM PF06296.


ensembl_gene_id: ACP_1642
symbol: mqnC
gene_biotype: protein_coding
description:
  Radical SAM domain protein; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: ACP_1647
symbol: mnmA
gene_biotype: protein_coding
description:
  (5-methylaminomethyl-2-thiouridylate)- methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: ACP_1648
symbol: engA
gene_biotype: protein_coding
description:
  Ribosome-associated GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: ACP_1654
symbol: ACP_1654
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:BAC91407.1; match to protein family HMM PF07366.


ensembl_gene_id: ACP_1656
symbol: crtE2
gene_biotype: protein_coding
description:
  Geranylgeranyl diphosphate synthase; Identified by similarity to GB:BAA82613.1; match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: ACP_1658
symbol: ACP_1658
gene_biotype: protein_coding
description:
  HAD-superfamily hydrolase, subfamily IA, variant 3; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549.


ensembl_gene_id: ACP_1661
symbol: ACP_1661
gene_biotype: protein_coding
description:
  Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: ACP_1668
symbol: ACP_1668
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:AAS69285.1; match to protein family HMM PF08327.


ensembl_gene_id: ACP_1674
symbol: mrdB
gene_biotype: protein_coding
description:
  Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: ACP_1676
symbol: ACP_1676
gene_biotype: protein_coding
description:
  Sugar isomerase, KpsF/GutQ family; Identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393; Belongs to the SIS family. GutQ/KpsF subfamily.


ensembl_gene_id: ACP_1678
symbol: ACP_1678
gene_biotype: protein_coding
description:
  Thiol-disulfide oxidoreductase; Identified by similarity to SP:P35160; match to protein family HMM PF00578; match to protein family HMM PF08534.


ensembl_gene_id: ACP_1680
symbol: ACP_1680
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:BAB49186.1; match to protein family HMM PF00196.


ensembl_gene_id: ACP_1684
symbol: ACP_1684
gene_biotype: protein_coding
description:
  Identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM TIGR03423.


ensembl_gene_id: ACP_1686
symbol: mreC
gene_biotype: protein_coding
description:
  Rod shape-determining protein MreC; Identified by match to protein family HMM PF04085; match to protein family HMM TIGR00219.


ensembl_gene_id: ACP_1687
symbol: ACP_1687
gene_biotype: protein_coding
description:
  Cell shape determining protein MreB; Identified by similarity to SP:P13519; match to protein family HMM PF02491; match to protein family HMM PF06723; match to protein family HMM TIGR00904.


ensembl_gene_id: ACP_1690
symbol: ald
gene_biotype: protein_coding
description:
  Alanine dehydrogenase; Identified by match to protein family HMM PF01262; match to protein family HMM PF05222; match to protein family HMM TIGR00518; Belongs to the AlaDH/PNT family.


ensembl_gene_id: ACP_1692
symbol: ACP_1692
gene_biotype: protein_coding
description:
  Nitrogen regulation protein NtrY, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.


ensembl_gene_id: ACP_1693
symbol: ACP_1693
gene_biotype: protein_coding
description:
  Sigma-54 dependent DNA-binding response regulator; Identified by similarity to SP:Q06065; match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954.


ensembl_gene_id: ACP_1697
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: ACP_1698
symbol: ACP_1698
gene_biotype: protein_coding
description:
  CBS/transporter domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF03471.


ensembl_gene_id: ACP_1699
symbol: ybeY
gene_biotype: protein_coding
description:
  Conserved hypothetical protein TIGR00043; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: ACP_1710
symbol: ACP_1710
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: ACP_1716
symbol: mutM1
gene_biotype: protein_coding
description:
  DNA-formamidopyrimidine glycosylase; Identified by similarity to SP:P50465; match to protein family HMM PF01149; match to protein family HMM PF06831; Belongs to the FPG family.


ensembl_gene_id: ACP_1717
symbol: ACP_1717
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase domain protein; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF08494.


ensembl_gene_id: ACP_1718
symbol: cdd
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: ACP_1719
symbol: pdp
gene_biotype: protein_coding
description:
  Pyrimidine-nucleoside phosphorylase; Identified by similarity to SP:P39142; match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM PF07831; match to protein family HMM TIGR02644.


ensembl_gene_id: ACP_1720
symbol: ACP_1720
gene_biotype: protein_coding
description:
  nucleoside:Na+ symporter, concentrative nucleoside transporter (CNT) family; Identified by match to protein family HMM PF01773; match to protein family HMM PF07662; match to protein family HMM PF07670.


ensembl_gene_id: ACP_1721
symbol: punA
gene_biotype: protein_coding
description:
  Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: ACP_1723
symbol: ACP_1723
gene_biotype: protein_coding
description:
  Putative uridine kinase; Identified by match to protein family HMM PF00485; match to protein family HMM TIGR00235; Belongs to the uridine kinase family.


ensembl_gene_id: ACP_1729
symbol: ACP_1729
gene_biotype: protein_coding
description:
  Deoxyhypusine synthase family protein; Hypusine is a modified amino acid found in eukarya and archaea, but as yet unknown in prokarya; identified by match to protein family HMM PF01916; Belongs to the deoxyhypusine synthase family.


ensembl_gene_id: ACP_1736
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: ACP_1737
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: ACP_1738
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: ACP_1739
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: ACP_1740
symbol: ACP_1740
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:AAS70951.1; match to protein family HMM PF04028.


ensembl_gene_id: ACP_1743
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF01336; match to protein family HMM TIGR00643.


ensembl_gene_id: ACP_1744
symbol: ACP_1744
gene_biotype: protein_coding
description:
  Arginine decarboxylase, pyruvoyl-dependent; Identified by match to protein family HMM PF01862; match to protein family HMM TIGR00286.


ensembl_gene_id: ACP_1748
symbol: tadA
gene_biotype: protein_coding
description:
  Cytidine and deoxycytidylate deaminase zinc-binding region; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: ACP_1749
symbol: ACP_1749
gene_biotype: protein_coding
description:
  HAD-superfamily hydrolase, subfamily IIB; Identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR01484.


ensembl_gene_id: ACP_1755
symbol: ACP_1755
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:CAG37536.1; match to protein family HMM PF02021; Belongs to the UPF0102 family.


ensembl_gene_id: ACP_1765
symbol: ACP_1765
gene_biotype: protein_coding
description:
  Putative membrane protein; Identified by match to protein family HMM PF01988; match to protein family HMM PF02915.


ensembl_gene_id: ACP_1766
symbol: ACP_1766
gene_biotype: protein_coding
description:
  Prephenate dehydrogenase; Identified by match to protein family HMM PF01210; match to protein family HMM PF02153.


ensembl_gene_id: ACP_1767
symbol: aroF1
gene_biotype: protein_coding
description:
  3-deoxy-7-phosphoheptulonate synthase; Identified by match to protein family HMM PF00793; match to protein family HMM TIGR01361.


ensembl_gene_id: ACP_1769
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: ACP_1770
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: ACP_1771
symbol: trpF
gene_biotype: protein_coding
description:
  N-(5'phosphoribosyl)anthranilate isomerase; Identified by match to protein family HMM PF00697; Belongs to the TrpF family.


ensembl_gene_id: ACP_1772
symbol: trpC
gene_biotype: protein_coding
description:
  Indole-3-glycerol phosphate synthase; Identified by match to protein family HMM PF00218; Belongs to the TrpC family.


ensembl_gene_id: ACP_1776
symbol: fabF
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: ACP_1783
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: ACP_1785
symbol: ACP_1785
gene_biotype: protein_coding
description:
  Sensor histidine kinase with PAS/PAC and Response regulator receiver domains, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.


ensembl_gene_id: ACP_1788
symbol: ACP_1788
gene_biotype: protein_coding
description:
  Oxidoreductase, FAD-dependent; Identified by similarity to SP:O31616; match to protein family HMM PF01266; match to protein family HMM PF07992.


ensembl_gene_id: ACP_1789
symbol: citZ
gene_biotype: protein_coding
description:
  Citrate synthase 2; Identified by match to protein family HMM PF00285; match to protein family HMM TIGR01800; Belongs to the citrate synthase family.


ensembl_gene_id: ACP_1792
symbol: ACP_1792
gene_biotype: protein_coding
description:
  Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106.


ensembl_gene_id: ACP_1795
symbol: ACP_1795
gene_biotype: protein_coding
description:
  Amino acid transpoprter, cationic amino acid transporter (CAT) family; Identified by match to protein family HMM PF00324.


ensembl_gene_id: ACP_1797
symbol: ACP_1797
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to PIR:E83395; match to protein family HMM PF04237.


ensembl_gene_id: ACP_1798
symbol: ACP_1798
gene_biotype: protein_coding
description:
  NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.


ensembl_gene_id: ACP_1801
symbol: rpmB
gene_biotype: protein_coding
description:
  Ribosomal protein L28; Identified by match to protein family HMM PF00830; match to protein family HMM TIGR00009; Belongs to the bacterial ribosomal protein bL28 family.


ensembl_gene_id: ACP_1803
symbol: ACP_1803
gene_biotype: protein_coding
description:
  Putative phosophoadenylyl-sulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.


ensembl_gene_id: ACP_1804
symbol: cysN
gene_biotype: protein_coding
description:
  Sulfate adenylyltransferase, large subunit; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.


ensembl_gene_id: ACP_1805
symbol: cysD
gene_biotype: protein_coding
description:
  Sulfate adenylyltransferase, small subunit; Identified by similarity to SP:P21156; match to protein family HMM PF01507; match to protein family HMM TIGR02039.


ensembl_gene_id: ACP_1806
symbol: msrB
gene_biotype: protein_coding
description:
  methionine-R-sulfoxide reductase; Identified by match to protein family HMM PF01641; match to protein family HMM TIGR00357; Belongs to the MsrB Met sulfoxide reductase family.


ensembl_gene_id: ACP_1807
symbol: ACP_1807
gene_biotype: protein_coding
description:
  Putative endoribonuclease L-PSP; Identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004.


ensembl_gene_id: ACP_1809
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase, NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: ACP_1811
symbol: pccB
gene_biotype: protein_coding
description:
  methylmalonyl-CoA decarboxylase; Identified by similarity to PIR:T43828; match to protein family HMM PF01039.


ensembl_gene_id: ACP_1815
symbol: ACP_1815
gene_biotype: protein_coding
description:
  Identified by similarity to SP:P22250; match to protein family HMM PF00749; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: ACP_1816
symbol: ACP_1816
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to SP:P44031; match to protein family HMM PF05973.


ensembl_gene_id: ACP_1818
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: ACP_1823
symbol: ACP_1823
gene_biotype: protein_coding
description:
  Peptidase S54 (rhomboid) family protein, nonpeptidase homolog; Identified by match to protein family HMM PF01694.


ensembl_gene_id: ACP_1824
symbol: ACP_1824
gene_biotype: protein_coding
description:
  Peptidase, M28A family; Identified by match to protein family HMM PF01546; match to protein family HMM PF04389.


ensembl_gene_id: ACP_1827
symbol: ACP_1827
gene_biotype: protein_coding
description:
  Bacterial transferase, hexapeptide repeat family; Identified by match to protein family HMM PF00132.


ensembl_gene_id: ACP_1828
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase, alpha subunit; Identified by match to protein family HMM PF01409; match to protein family HMM TIGR00468; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: ACP_1830
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase, beta subunit; Identified by match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HMM PF03484; match to protein family HMM TIGR00472; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: ACP_1832
symbol: ACP_1832
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: ACP_1836
symbol: ohr
gene_biotype: protein_coding
description:
  Organic hydroperoxide resistance protein; Identified by similarity to SP:O68390; match to protein family HMM PF02566.


ensembl_gene_id: ACP_1837
symbol: ACP_1837
gene_biotype: protein_coding
description:
  Putative delta-9 desaturase; Identified by similarity to GB:CAA05166.1; match to protein family HMM PF00487.


ensembl_gene_id: ACP_1838
symbol: ACP_1838
gene_biotype: protein_coding
description:
  4-carboxymuconolactone decarboxylase domain protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: ACP_1839
symbol: ACP_1839
gene_biotype: protein_coding
description:
  Oxidoreductase, FAD-dependent; Identified by match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF03486; match to protein family HMM PF07992; match to protein family HMM TIGR00275.


ensembl_gene_id: ACP_1845
symbol: moaC
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: ACP_1846
symbol: moeA
gene_biotype: protein_coding
description:
  Molybdopterin biosynthesis protein MoeA; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: ACP_1848
symbol: exsB
gene_biotype: protein_coding
description:
  exsB protein; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.


ensembl_gene_id: ACP_1851
symbol: ACP_1851
gene_biotype: protein_coding
description:
  Inorganic anion transporter, SulP family; Identified by match to protein family HMM PF00860; match to protein family HMM PF00916; match to protein family HMM PF01740.


ensembl_gene_id: ACP_1852
symbol: gid
gene_biotype: protein_coding
description:
  Gid protein; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.


ensembl_gene_id: ACP_1853
symbol: ACP_1853
gene_biotype: protein_coding
description:
  Permease subunit of a ABC-type transport system involved in lipoprotein release, putative; Identified by match to protein family HMM PF02687.


ensembl_gene_id: ACP_1857
symbol: ACP_1857
gene_biotype: protein_coding
description:
  Tungsten formylmethanofuran dehydrogenase, subunit E; Identified by match to protein family HMM PF02663.


ensembl_gene_id: ACP_1864
symbol: gatA
gene_biotype: protein_coding
description:
  glutamyl-tRNA(Gln) amidotransferase, A subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: ACP_1865
symbol: gatC
gene_biotype: protein_coding
description:
  glutamyl-tRNA; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: ACP_1867
symbol: rfbD
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.


ensembl_gene_id: ACP_1868
symbol: rfbC
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: ACP_1869
symbol: rfbA
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: ACP_1870
symbol: rfbB
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01181; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: ACP_1872
symbol: ACP_1872
gene_biotype: protein_coding
description:
  Polysaccharide biosynthesis/export protein; Identified by similarity to SP:Q03961; match to protein family HMM PF02563.


ensembl_gene_id: ACP_1875
symbol: phrB
gene_biotype: protein_coding
description:
  Deoxyribodipyrimidine photolyase; Identified by similarity to SP:P12769; match to protein family HMM PF03441.


ensembl_gene_id: ACP_1882
symbol: pyk
gene_biotype: protein_coding
description:
  Pyruvate kinase; Identified by match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064; Belongs to the pyruvate kinase family.


ensembl_gene_id: ACP_1883
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: ACP_1887
symbol: cmk
gene_biotype: protein_coding
description:
  Cytidylate kinase; Identified by similarity to SP:P38493; match to protein family HMM PF02224; match to protein family HMM TIGR00017.


ensembl_gene_id: ACP_1893
symbol: ACP_1893
gene_biotype: protein_coding
description:
  RNA polymerase sigma-70 factor, ECF family protein; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: ACP_1894
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: ACP_1900
symbol: ACP_1900
gene_biotype: protein_coding
description:
  MFS transporter, anion:cation symporter (ACS) family; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.


ensembl_gene_id: ACP_1902
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-0-acyl N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: ACP_1903
symbol: ACP_1903
gene_biotype: protein_coding
description:
  Peptidase, M20/M25/M40 family; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687.


ensembl_gene_id: ACP_1905
symbol: maf
gene_biotype: protein_coding
description:
  Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: ACP_1907
symbol: ACP_1907
gene_biotype: protein_coding
description:
  Transporter, small conductance mechanosensitive ion channel family; Identified by match to protein family HMM PF00924.


ensembl_gene_id: ACP_1909
symbol: moaB
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein B; Identified by match to protein family HMM PF00994; match to protein family HMM TIGR00177.


ensembl_gene_id: ACP_1912
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: ACP_1916
symbol: bioF
gene_biotype: protein_coding
description:
  8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.


ensembl_gene_id: ACP_1917
symbol: ACP_1917
gene_biotype: protein_coding
description:
  Peptidase, M13 family; Identified by match to protein family HMM PF01431; match to protein family HMM PF05649.


ensembl_gene_id: ACP_1920
symbol: ACP_1920
gene_biotype: protein_coding
description:
  Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.


ensembl_gene_id: ACP_1923
symbol: fabD
gene_biotype: protein_coding
description:
  Malonyl CoA-acyl carrier protein transacylase; Identified by similarity to SP:P71019; match to protein family HMM PF00698; match to protein family HMM TIGR00128.


ensembl_gene_id: ACP_1925
symbol: plsX
gene_biotype: protein_coding
description:
  Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: ACP_1926
symbol: rpmF
gene_biotype: protein_coding
description:
  Ribosomal protein L32; Identified by match to protein family HMM PF01783; match to protein family HMM TIGR01031; Belongs to the bacterial ribosomal protein bL32 family.


ensembl_gene_id: ACP_1927
symbol: ACP_1927
gene_biotype: protein_coding
description:
  Conserved domain protein; Identified by similarity to PIR:E72412; match to protein family HMM PF02620.


ensembl_gene_id: ACP_1937
symbol: ACP_1937
gene_biotype: protein_coding
description:
  Conserved hypothetical protein TIGR00730; Identified by match to protein family HMM PF03641; match to protein family HMM TIGR00730; Belongs to the LOG family.


ensembl_gene_id: ACP_1942
symbol: ACP_1942
gene_biotype: protein_coding
description:
  Possible transcriptional regulator, TetR family, putative; Identified by match to protein family HMM PF00440.


ensembl_gene_id: ACP_1947
symbol: ACP_1947
gene_biotype: protein_coding
description:
  VOC family protein; Identified by match to protein family HMM PF00903; match to protein family HMM PF06983.


ensembl_gene_id: ACP_1952
symbol: ACP_1952
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:CAI07107.1; match to protein family HMM PF03781; match to protein family HMM TIGR03440.


ensembl_gene_id: ACP_1953
symbol: ACP_1953
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:AAS02620.1; match to protein family HMM PF08242; match to protein family HMM TIGR03438.


ensembl_gene_id: ACP_1954
symbol: ACP_1954
gene_biotype: protein_coding
description:
  malate/L-lactate dehydrogenase family; Identified by match to protein family HMM PF02615; Belongs to the LDH2/MDH2 oxidoreductase family.


ensembl_gene_id: ACP_1962
symbol: alaS
gene_biotype: protein_coding
description:
  alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: ACP_1964
symbol: ACP_1964
gene_biotype: protein_coding
description:
  Regulator of sigma-B activity, putative; Identified by match to protein family HMM PF01590; match to protein family HMM PF07228.


ensembl_gene_id: ACP_1967
symbol: ACP_1967
gene_biotype: protein_coding
description:
  Putative rhamnosyl transferase; Identified by similarity to GB:AAA62129.1; match to protein family HMM PF03033.


ensembl_gene_id: ACP_1970
symbol: ACP_1970
gene_biotype: protein_coding
description:
  O-glycosyl hydrolase, family 30; Identified by match to protein family HMM PF02055; Belongs to the glycosyl hydrolase 30 family.


ensembl_gene_id: ACP_1971
symbol: ACP_1971
gene_biotype: protein_coding
description:
  Drug resistance transporter, EmrB/QacA subfamily; Identified by similarity to SP:P27304; match to protein family HMM PF07690; match to protein family HMM TIGR00711; Belongs to the major facilitator superfamily.


ensembl_gene_id: ACP_1972
symbol: ACP_1972
gene_biotype: protein_coding
description:
  Putative sensory box histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF08448; match to protein family HMM TIGR00229.


ensembl_gene_id: ACP_1973
symbol: ACP_1973
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes.


ensembl_gene_id: ACP_1976
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: ACP_1977
symbol: ACP_1977
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:BAC72761.1; match to protein family HMM PF03966.


ensembl_gene_id: ACP_1979
symbol: ACP_1979
gene_biotype: protein_coding
description:
  Intracellular protease, PfpI family; Identified by match to protein family HMM PF01965; match to protein family HMM TIGR01382.


ensembl_gene_id: ACP_1980
symbol: ACP_1980
gene_biotype: protein_coding
description:
  Putative Mg chelatase; Identified by match to protein family HMM PF01078; match to protein family HMM PF07728; match to protein family HMM TIGR00368.


ensembl_gene_id: ACP_1982
symbol: ACP_1982
gene_biotype: protein_coding
description:
  TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715; match to protein family HMM TIGR01782.


ensembl_gene_id: ACP_1985
symbol: ACP_1985
gene_biotype: protein_coding
description:
  Identified by match to protein family HMM PF00873; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: ACP_1997
symbol: holA
gene_biotype: protein_coding
description:
  DNA polymerase III, delta subunit; Identified by match to protein family HMM PF06144; match to protein family HMM TIGR01128.


ensembl_gene_id: ACP_2002
symbol: panC
gene_biotype: protein_coding
description:
  Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: ACP_2003
symbol: panB
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: ACP_2005
symbol: ACP_2005
gene_biotype: protein_coding
description:
  Glycosyl tranferase, homolog; Identified by similarity to GB:CAH34282.1; match to protein family HMM TIGR03472.


ensembl_gene_id: ACP_2006
symbol: ACP_2006
gene_biotype: protein_coding
description:
  Efflux ABC transporter, macrolide exporter (MacB) family, permease protein; Identified by match to protein family HMM PF02687.


ensembl_gene_id: ACP_2011
symbol: pyrR
gene_biotype: protein_coding
description:
  Phosphoribosyl transferase domain protein; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.


ensembl_gene_id: ACP_2012
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00670; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: ACP_2013
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase, multifunctional complex type; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: ACP_2014
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: ACP_2019
symbol: ACP_2019
gene_biotype: protein_coding
description:
  A/G-specific adenine glycosylase, putative; Identified by match to protein family HMM PF00633; match to protein family HMM PF00730.


ensembl_gene_id: ACP_2020
symbol: add
gene_biotype: protein_coding
description:
  Adenosine deaminase; Identified by match to protein family HMM PF00962; match to protein family HMM TIGR01430.


ensembl_gene_id: ACP_2025
symbol: purD
gene_biotype: protein_coding
description:
  Phosphoribosylamine--glycine ligase; Identified by match to protein family HMM PF01071; match to protein family HMM PF02655; match to protein family HMM PF02843; match to protein family HMM PF02844; match to protein family HMM TIGR00877; Belongs to the GARS family.


ensembl_gene_id: ACP_2030
symbol: ACP_2030
gene_biotype: protein_coding
description:
  DNA-binding protein HU; Identified by similarity to SP:P08821; match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family.


ensembl_gene_id: ACP_2035
symbol: ACP_2035
gene_biotype: protein_coding
description:
  Helicase, DEAD/DEAH domain protein; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF08494.


ensembl_gene_id: ACP_2036
symbol: ftsH
gene_biotype: protein_coding
description:
  ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: ACP_2037
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: ACP_2038
symbol: lepB2
gene_biotype: protein_coding
description:
  Signal peptidase I; Identified by similarity to SP:P00803; match to protein family HMM PF00717; match to protein family HMM TIGR02227; Belongs to the peptidase S26 family.


ensembl_gene_id: ACP_2040
symbol: ACP_2040
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to PIR:H97758; match to protein family HMM PF05170.


ensembl_gene_id: ACP_2042
symbol: ACP_2042
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: ACP_2049
symbol: ACP_2049
gene_biotype: protein_coding
description:
  Response regulators of cell autolysis; Identified by match to protein family HMM PF00072; match to protein family HMM PF04397.


ensembl_gene_id: ACP_2054
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: ACP_2059
symbol: ACP_2059
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:BAB53534.1; match to protein family HMM PF06935.


ensembl_gene_id: ACP_2061
symbol: ACP_2061
gene_biotype: protein_coding
description:
  Oligopeptide transporter, OPT family; Identified by match to protein family HMM PF03169; match to protein family HMM TIGR00728; match to protein family HMM TIGR00733.


ensembl_gene_id: ACP_2062
symbol: msuD
gene_biotype: protein_coding
description:
  Methanesulfonate sulfonatase MsuD; Identified by similarity to GB:AAB82564.1; match to protein family HMM PF00296.


ensembl_gene_id: ACP_2065
symbol: rpsR
gene_biotype: protein_coding
description:
  Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: ACP_2067
symbol: pth
gene_biotype: protein_coding
description:
  aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: ACP_2068
symbol: rplY
gene_biotype: protein_coding
description:
  Ribosomal protein L25, Ctc-form; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: ACP_2069
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase family protein; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: ACP_2071
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: ACP_2074
symbol: hemL
gene_biotype: protein_coding
description:
  Glutamate-1-semialdehyde-2,1-aminomutase; Identified by match to protein family HMM PF00202; match to protein family HMM TIGR00713.


ensembl_gene_id: ACP_2077
symbol: ychF
gene_biotype: protein_coding
description:
  GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: ACP_2078
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: ACP_2079
symbol: galU
gene_biotype: protein_coding
description:
  UTP-glucose-1-phosphate uridylyltransferase; Identified by similarity to SP:Q05852; match to protein family HMM PF00483; match to protein family HMM TIGR01099.


ensembl_gene_id: ACP_2080
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: ACP_2081
symbol: ACP_2081
gene_biotype: protein_coding
description:
  Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229.


ensembl_gene_id: ACP_2084
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: ACP_2085
symbol: ACP_2085
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:BAB80641.1; match to protein family HMM PF03928.


ensembl_gene_id: ACP_2086
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: ACP_2087
symbol: grpE
gene_biotype: protein_coding
description:
  Co-chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depend [...]


ensembl_gene_id: ACP_2088
symbol: dnaJ
gene_biotype: protein_coding
description:
  Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]


ensembl_gene_id: ACP_2091
symbol: ACP_2091
gene_biotype: protein_coding
description:
  Oxidoreductase, molybdopterin-binding; Identified by match to protein family HMM PF00174; match to protein family HMM TIGR01409.


ensembl_gene_id: ACP_2093
symbol: tatA
gene_biotype: protein_coding
description:
  Twin-arginine translocation protein, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: ACP_2096
symbol: gcvT
gene_biotype: protein_coding
description:
  Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine.


ensembl_gene_id: ACP_2097
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: ACP_2098
symbol: gcvPA
gene_biotype: protein_coding
description:
  Putative glycine cleavage system P-protein, subunit 1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.


ensembl_gene_id: ACP_2099
symbol: gcvPB
gene_biotype: protein_coding
description:
  Putative glycine cleavage system P-protein, subunit 2; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily.


ensembl_gene_id: ACP_2108
symbol: ACP_2108
gene_biotype: protein_coding
description:
  Beta-glucosidase; Identified by similarity to SP:P27034; match to protein family HMM PF00933; match to protein family HMM PF01915.


ensembl_gene_id: ACP_2110
symbol: ACP_2110
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase, beta subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.


ensembl_gene_id: ACP_2111
symbol: ACP_2111
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: ACP_2113
symbol: ACP_2113
gene_biotype: protein_coding
description:
  Two-component response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF08281.


ensembl_gene_id: ACP_2117
symbol: yidC
gene_biotype: protein_coding
description:
  Membrane protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: ACP_2119
symbol: ACP_2119
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: ACP_2120
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: ACP_2121
symbol: rpmH
gene_biotype: protein_coding
description:
  Ribosomal protein L34; Identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family.


ensembl_gene_id: ACP_2123
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: ACP_2125
symbol: ACP_2125
gene_biotype: protein_coding
description:
  Efflux ABC transporter, macrolide exporter (MacB) family, permease protein; Identified by similarity to SP:P75831; match to protein family HMM PF02687; match to protein family HMM TIGR03434.


ensembl_gene_id: ACP_2131
symbol: ACP_2131
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase, PpiC type; Identified by similarity to SP:P21202; match to protein family HMM PF00639; match to protein family HMM PF09312.


ensembl_gene_id: ACP_2134
symbol: ACP_2134
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxylase; Identified by match to protein family HMM PF00289; match to protein family HMM PF02222; match to protein family HMM PF02785; match to protein family HMM PF02786; match to protein family HMM TIGR00514.


ensembl_gene_id: ACP_2137
symbol: ACP_2137
gene_biotype: protein_coding
description:
  Transport energizing protein, ExbD/TolR family; Identified by similarity to SP:Q05606; match to protein family HMM PF02472.


ensembl_gene_id: ACP_2139
symbol: ACP_2139
gene_biotype: protein_coding
description:
  TonB domain protein; Identified by match to protein family HMM PF03544; match to protein family HMM TIGR01352.


ensembl_gene_id: ACP_2140
symbol: secF
gene_biotype: protein_coding
description:
  Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: ACP_2141
symbol: secD
gene_biotype: protein_coding
description:
  Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: ACP_2142
symbol: yajC
gene_biotype: protein_coding
description:
  Preprotein translocase, YajC subunit; Identified by match to protein family HMM PF02699; match to protein family HMM TIGR00739.


ensembl_gene_id: ACP_2147
symbol: ACP_2147
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:AAV46321.1; match to protein family HMM PF08495.


ensembl_gene_id: ACP_2148
symbol: ACP_2148
gene_biotype: protein_coding
description:
  Conserved domain protein; Identified by similarity to GB:BAC09164.1; match to protein family HMM PF08447.


ensembl_gene_id: ACP_2151
symbol: ACP_2151
gene_biotype: protein_coding
description:
  Cna protein B-type domain protein; Identified by match to protein family HMM PF00593; match to protein family HMM PF05738.


ensembl_gene_id: ACP_2154
symbol: tgt
gene_biotype: protein_coding
description:
  tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...]


ensembl_gene_id: ACP_2159
symbol: obg
gene_biotype: protein_coding
description:
  GTP-binding protein Obg/CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: ACP_2160
symbol: alr
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: ACP_2162
symbol: thrS
gene_biotype: protein_coding
description:
  threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). Also edits incorrectly charged L-seryl-tRNA(Thr).


ensembl_gene_id: ACP_2169
symbol: ACP_2169
gene_biotype: protein_coding
description:
  Tetrahydrofolate synthase; Identified by match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01499; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: ACP_2171
symbol: ACP_2171
gene_biotype: protein_coding
description:
  class-I glutamine amidotransferase family protein; Identified by match to protein family HMM PF00117; match to protein family HMM PF07722.


ensembl_gene_id: ACP_2172
symbol: gidB
gene_biotype: protein_coding
description:
  Methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: ACP_2173
symbol: parA
gene_biotype: protein_coding
description:
  Chromosome partitioning protein parA; Identified by similarity to SP:O05189; match to protein family HMM PF01656.


ensembl_gene_id: ACP_2174
symbol: parB
gene_biotype: protein_coding
description:
  Chromosome partitioning protein parB; Identified by similarity to SP:O05190; match to protein family HMM PF02195; match to protein family HMM TIGR00180; Belongs to the ParB family.


ensembl_gene_id: ACP_2183
symbol: trmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: ACP_2186
symbol: ACP_2186
gene_biotype: protein_coding
description:
  Putative addiction module antidote protein, CC2985 family; Identified by match to protein family HMM PF03693; match to protein family HMM TIGR02606.


ensembl_gene_id: ACP_2187
symbol: ACP_2187
gene_biotype: protein_coding
description:
  Plasmid stabilization system protein, RelE/ParE family; Identified by match to protein family HMM PF05016; Belongs to the RelE toxin family.


ensembl_gene_id: ACP_2188
symbol: hemB
gene_biotype: protein_coding
description:
  Porphobilinogen synthase; Identified by match to protein family HMM PF00490; Belongs to the ALAD family.


ensembl_gene_id: ACP_2190
symbol: ACP_2190
gene_biotype: protein_coding
description:
  Conserved hypothetical protein TIGR00250; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: ACP_2191
symbol: mltG
gene_biotype: protein_coding
description:
  Conserved hypothetical protein TIGR00247; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: ACP_2196
symbol: dnaN
gene_biotype: protein_coding
description:
  DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]


ensembl_gene_id: ACP_2197
symbol: ACP_2197
gene_biotype: protein_coding
description:
  Two-component system, regulatory protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF02954.


ensembl_gene_id: ACP_2198
symbol: ACP_2198
gene_biotype: protein_coding
description:
  Histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.


ensembl_gene_id: ACP_2200
symbol: ACP_2200
gene_biotype: protein_coding
description:
  Transporter, glucose-selective OprB porin (OprB) family; Identified by similarity to SP:Q51485; match to protein family HMM PF04966; Belongs to the OprB family.


ensembl_gene_id: ACP_2202
symbol: ACP_2202
gene_biotype: protein_coding
description:
  Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: ACP_2204
symbol: asnS
gene_biotype: protein_coding
description:
  asparagine--tRNA ligase; Identified by match to protein family HMM PF00152; match to protein family HMM PF00587; match to protein family HMM PF01336; match to protein family HMM TIGR00457.


ensembl_gene_id: ACP_2205
symbol: rocF
gene_biotype: protein_coding
description:
  Arginase; Identified by match to protein family HMM PF00491; match to protein family HMM TIGR01229; Belongs to the arginase family.


ensembl_gene_id: ACP_2207
symbol: ACP_2207
gene_biotype: protein_coding
description:
  Addiction module antidote protein, HigA family; Identified by match to protein family HMM PF01381; match to protein family HMM TIGR02607.


ensembl_gene_id: ACP_2209
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: ACP_2214
symbol: ACP_2214
gene_biotype: protein_coding
description:
  Putative translation elongation factor G; Identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM PF03764; match to protein family HMM TIGR00231.


ensembl_gene_id: ACP_2217
symbol: ACP_2217
gene_biotype: protein_coding
description:
  Putative 4-aminobutyrate aminotransferase; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: ACP_2220
symbol: cysS
gene_biotype: protein_coding
description:
  cysteine--tRNA ligase; Identified by match to protein family HMM PF01406; match to protein family HMM PF09190; match to protein family HMM PF09334; match to protein family HMM TIGR00435; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: ACP_2221
symbol: tsaD
gene_biotype: protein_coding
description:
  Metalloendopeptidase, glycoprotease family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: ACP_2222
symbol: ACP_2222
gene_biotype: protein_coding
description:
  tRNA nucleotidyltransferase/poly(A) polymerase family protein; Identified by match to protein family HMM PF01743; match to protein family HMM PF01966; match to protein family HMM TIGR00277; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: ACP_2223
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: ACP_2224
symbol: ACP_2224
gene_biotype: protein_coding
description:
  Identified by match to protein family HMM PF01066; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: ACP_2227
symbol: aroD
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase, type I domain/shikimate 5-dehydrogenase domain protein; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA); Belongs to the type-I 3-dehydroquinase family.


ensembl_gene_id: ACP_2233
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: ACP_2243
symbol: ACP_2243
gene_biotype: protein_coding
description:
  Identified by match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242.


ensembl_gene_id: ACP_2244
symbol: ACP_2244
gene_biotype: protein_coding
description:
  Anti-anti-sigma factor; Identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; Belongs to the anti-sigma-factor antagonist family.


ensembl_gene_id: ACP_2247
symbol: rpmI
gene_biotype: protein_coding
description:
  Ribosomal protein L35; Identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001; Belongs to the bacterial ribosomal protein bL35 family.


ensembl_gene_id: ACP_2248
symbol: rplT
gene_biotype: protein_coding
description:
  Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: ACP_2249
symbol: folP
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: ACP_2250
symbol: dacB
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; Identified by match to protein family HMM PF02113; match to protein family HMM TIGR00666.


ensembl_gene_id: ACP_2253
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: ACP_2257
symbol: rpsU
gene_biotype: protein_coding
description:
  Ribosomal protein S21; Identified by match to protein family HMM PF01165; match to protein family HMM TIGR00030; Belongs to the bacterial ribosomal protein bS21 family.


ensembl_gene_id: ACP_2259
symbol: ACP_2259
gene_biotype: protein_coding
description:
  Antibiotic biosynthesis monooxygenase domain protein; Identified by match to protein family HMM PF03992.


ensembl_gene_id: ACP_2260
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: ACP_2261
symbol: mutM2
gene_biotype: protein_coding
description:
  DNA-formamidopyrimidine glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: ACP_2262
symbol: ACP_2262
gene_biotype: protein_coding
description:
  Arsenical pump membrane protein; Identified by match to protein family HMM PF02040; match to protein family HMM PF03600.


ensembl_gene_id: ACP_2265
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: ACP_2267
symbol: cobO
gene_biotype: protein_coding
description:
  cob(I)yrinic acid a,c-diamide adenosyltransferase; Identified by match to protein family HMM PF02572; match to protein family HMM TIGR00708.


ensembl_gene_id: ACP_2268
symbol: rlmH
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: ACP_2271
symbol: mutS2
gene_biotype: protein_coding
description:
  MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: ACP_2273
symbol: sodA
gene_biotype: protein_coding
description:
  Superoxide dismutase, Mn; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: ACP_2274
symbol: ACP_2274
gene_biotype: protein_coding
description:
  Putative glucan 1,4-alpha-glucosidase; Identified by match to protein family HMM PF00723; match to protein family HMM PF09137.


ensembl_gene_id: ACP_2276
symbol: tkt
gene_biotype: protein_coding
description:
  Transketolase; Identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00232; Belongs to the transketolase family.


ensembl_gene_id: ACP_2277
symbol: rpiB
gene_biotype: protein_coding
description:
  Ribose 5-phosphate isomerase B; Identified by match to protein family HMM PF02502; match to protein family HMM TIGR00689; match to protein family HMM TIGR01120.


ensembl_gene_id: ACP_2279
symbol: gnd
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydrogenase (decarboxylating); Identified by match to protein family HMM PF00393; match to protein family HMM PF03446; match to protein family HMM TIGR00872.


ensembl_gene_id: ACP_2282
symbol: glk
gene_biotype: protein_coding
description:
  Glucokinase; Identified by similarity to SP:P46880; match to protein family HMM PF02685; match to protein family HMM TIGR00749; Belongs to the bacterial glucokinase family.


ensembl_gene_id: ACP_2287
symbol: ACP_2287
gene_biotype: protein_coding
description:
  DNA-3-methyladenine glycosylase; Identified by match to protein family HMM PF02245; match to protein family HMM TIGR00567; Belongs to the DNA glycosylase MPG family.


ensembl_gene_id: ACP_2288
symbol: ACP_2288
gene_biotype: protein_coding
description:
  Putative peroxiredoxin bcp; Identified by similarity to SP:P23480; match to protein family HMM PF00578; match to protein family HMM PF08534.


ensembl_gene_id: ACP_2290
symbol: ACP_2290
gene_biotype: protein_coding
description:
  RND efflux system, outer membrane lipoprotein, NodT family; Identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845.


ensembl_gene_id: ACP_2293
symbol: agpA
gene_biotype: protein_coding
description:
  Alpha-glucan phosphorylase; Identified by similarity to GB:CAA04523.1; match to protein family HMM PF00343; match to protein family HMM TIGR02094.


ensembl_gene_id: ACP_2294
symbol: galK
gene_biotype: protein_coding
description:
  Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.


ensembl_gene_id: ACP_2295
symbol: ACP_2295
gene_biotype: protein_coding
description:
  Pyridoxal-dependent decarboxylase conserved domain protein; Identified by match to protein family HMM PF00282.


ensembl_gene_id: ACP_2297
symbol: ACP_2297
gene_biotype: protein_coding
description:
  Peptidase, M13 (neprilysin) family; Identified by similarity to GB:BAA24495.1; match to protein family HMM PF01431; match to protein family HMM PF05649.


ensembl_gene_id: ACP_2301
symbol: ACP_2301
gene_biotype: protein_coding
description:
  Phytoene desaturase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593; match to protein family HMM TIGR02734.


ensembl_gene_id: ACP_2303
symbol: ACP_2303
gene_biotype: protein_coding
description:
  Phytoene dehydrogenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593; match to protein family HMM TIGR02734.


ensembl_gene_id: ACP_2304
symbol: ACP_2304
gene_biotype: protein_coding
description:
  Transporter, SSS family; Identified by match to protein family HMM PF00474; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: ACP_2305
symbol: ACP_2305
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to SP:Q8TYM3; match to protein family HMM PF02594; Belongs to the UPF0235 family.


ensembl_gene_id: ACP_2306
symbol: ACP_2306
gene_biotype: protein_coding
description:
  Conserved hypothetical protein TIGR00044; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: ACP_2307
symbol: ACP_2307
gene_biotype: protein_coding
description:
  Conserved hypothetical protein TIGR00046; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: ACP_2309
symbol: ACP_2309
gene_biotype: protein_coding
description:
  Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: ACP_2310
symbol: ACP_2310
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:AAW75492.1; match to protein family HMM PF08241; match to protein family HMM PF08242.


ensembl_gene_id: ACP_2311
symbol: sdaA
gene_biotype: protein_coding
description:
  L-serine ammonia-lyase; Identified by match to protein family HMM PF03313; match to protein family HMM PF03315; match to protein family HMM TIGR00720; Belongs to the iron-sulfur dependent L-serine dehydratase family.


ensembl_gene_id: ACP_2312
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: ACP_2314
symbol: cobB
gene_biotype: protein_coding
description:
  Putative nicotinic acid mononucleotide:5, 6-dimethylbenzimidazole(DMB)phosphoribosyltransferase; Identified by similarity to GB:AAC78722.1; match to protein family HMM PF02146; Belongs to the sirtuin family. Class III subfamily.


ensembl_gene_id: ACP_2315
symbol: folK
gene_biotype: protein_coding
description:
  2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase; Identified by match to protein family HMM PF01288; match to protein family HMM TIGR01498.


ensembl_gene_id: ACP_2317
symbol: rpsA
gene_biotype: protein_coding
description:
  Ribosomal protein S1; Identified by match to protein family HMM PF00575; match to protein family HMM TIGR00717.


ensembl_gene_id: ACP_2319
symbol: ACP_2319
gene_biotype: protein_coding
description:
  2Fe-2S iron-sulfur cluster binding protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799; match to protein family HMM TIGR01409.


ensembl_gene_id: ACP_2320
symbol: ACP_2320
gene_biotype: protein_coding
description:
  Molybdopterin dehydrogenase, FAD-binding domain protein; Identified by match to protein family HMM PF00941.


ensembl_gene_id: ACP_2321
symbol: ACP_2321
gene_biotype: protein_coding
description:
  Oxidoreductase, aldehyde oxidase/xanthine dehydrogenase family; Identified by match to protein family HMM PF01315; match to protein family HMM PF02738.


ensembl_gene_id: ACP_2322
symbol: ACP_2322
gene_biotype: protein_coding
description:
  Putative xanthine dehydrogenase accessory factor; Identified by match to protein family HMM PF02625.


ensembl_gene_id: ACP_2327
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.


ensembl_gene_id: ACP_2328
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: ACP_2329
symbol: nusB
gene_biotype: protein_coding
description:
  Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: ACP_2330
symbol: crt
gene_biotype: protein_coding
description:
  3-hydroxybutyryl-CoA dehydratase; Identified by similarity to SP:P52046; match to protein family HMM PF00378.


ensembl_gene_id: ACP_2332
symbol: ACP_2332
gene_biotype: protein_coding
description:
  D-isomer specific 2-hydroxyacid dehydrogenase family protein; Identified by match to protein family HMM PF02826.


ensembl_gene_id: ACP_2333
symbol: ACP_2333
gene_biotype: protein_coding
description:
  FAD-binding/oxidase/4Fe-4S binding domain protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF01565; match to protein family HMM PF02913.


ensembl_gene_id: ACP_2334
symbol: aspC
gene_biotype: protein_coding
description:
  Aspartate aminotransferase; Identified by similarity to SP:Q56232; match to protein family HMM PF00155.


ensembl_gene_id: ACP_2335
symbol: ACP_2335
gene_biotype: protein_coding
description:
  Putative phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; Identified by match to protein family HMM PF00977; Belongs to the HisA/HisF family.


ensembl_gene_id: ACP_2336
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazoleglycerol phosphate synthase, cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: ACP_2337
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: ACP_2339
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate transaminase; Identified by match to protein family HMM PF00155; match to protein family HMM TIGR01141; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: ACP_2340
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: ACP_2341
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily.


ensembl_gene_id: ACP_2342
symbol: ACP_2342
gene_biotype: protein_coding
description:
  phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP; Belongs to the PRA-CH family.


ensembl_gene_id: ACP_2343
symbol: ACP_2343
gene_biotype: protein_coding
description:
  Histidine kinase/response regulator hybrid protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.


ensembl_gene_id: ACP_2344
symbol: kdsA
gene_biotype: protein_coding
description:
  3-deoxy-8-phosphooctulonate synthase; Identified by match to protein family HMM PF00793; match to protein family HMM TIGR01362; Belongs to the KdsA family.


ensembl_gene_id: ACP_2346
symbol: aspS
gene_biotype: protein_coding
description:
  aspartate--tRNA ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: ACP_2347
symbol: ACP_2347
gene_biotype: protein_coding
description:
  Conserved domain protein; Identified by similarity to GB:AAP58485.1; match to protein family HMM PF07605.


ensembl_gene_id: ACP_2348
symbol: hisS
gene_biotype: protein_coding
description:
  histidine--tRNA ligase; Identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM TIGR00442.


ensembl_gene_id: ACP_2349
symbol: gidA
gene_biotype: protein_coding
description:
  Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: ACP_2350
symbol: ACP_2350
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase; Identified by similarity to SP:P25888; match to protein family HMM PF00270; match to protein family HMM PF00271; Belongs to the DEAD box helicase family.


ensembl_gene_id: ACP_2353
symbol: ACP_2353
gene_biotype: protein_coding
description:
  Na+/H+ antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.


ensembl_gene_id: ACP_2354
symbol: ACP_2354
gene_biotype: protein_coding
description:
  Putative dihydrolipoamide acetyltransferase; Identified by similarity to GB:AAD17484.2; match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817; match to protein family HMM TIGR02927.


ensembl_gene_id: ACP_2355
symbol: purK
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase, ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: ACP_2356
symbol: purE
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: ACP_2380
symbol: sthA
gene_biotype: protein_coding
description:
  Soluble pyridine nucleotide transhydrogenase; Identified by similarity to SP:P27306; match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992.


ensembl_gene_id: ACP_2391
symbol: ACP_2391
gene_biotype: protein_coding
description:
  Aminotransferase, class V; Identified by match to protein family HMM PF00266; match to protein family HMM PF01053.


ensembl_gene_id: ACP_2392
symbol: serA
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Identified by match to protein family HMM PF00389; match to protein family HMM PF01842; match to protein family HMM PF02826; match to protein family HMM TIGR01327; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: ACP_2396
symbol: ACP_2396
gene_biotype: protein_coding
description:
  Putative undecaprenol kinase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP); Belongs to the UppP family.


ensembl_gene_id: ACP_2397
symbol: ACP_2397
gene_biotype: protein_coding
description:
  acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.


ensembl_gene_id: ACP_2398
symbol: ACP_2398
gene_biotype: protein_coding
description:
  Peptide/nickel transport system ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; Belongs to the ABC transporter superfamily.


ensembl_gene_id: ACP_2402
symbol: ACP_2402
gene_biotype: protein_coding
description:
  RNA polymerase sigma-70 factor, ECF family; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: ACP_2406
symbol: ACP_2406
gene_biotype: protein_coding
description:
  Heat shock protein, Hsp20 family; Identified by match to protein family HMM PF00011; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: ACP_2407
symbol: clpB
gene_biotype: protein_coding
description:
  ATP-dependent chaperone protein ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: ACP_2410
symbol: ACP_2410
gene_biotype: protein_coding
description:
  Alpha-glucosidase II; Identified by similarity to SP:Q9F234; match to protein family HMM PF01055; Belongs to the glycosyl hydrolase 31 family.


ensembl_gene_id: ACP_2412
symbol: bxlB2
gene_biotype: protein_coding
description:
  Identified by similarity to GB:CAD48309.1; match to protein family HMM PF00933; match to protein family HMM PF01915; match to protein family HMM PF07691.


ensembl_gene_id: ACP_2414
symbol: ACP_2414
gene_biotype: protein_coding
description:
  K+ channel, voltage-gated ion channel (VIC) family; Identified by match to protein family HMM PF00520; match to protein family HMM PF02254; match to protein family HMM PF07885.


ensembl_gene_id: ACP_2416
symbol: ACP_2416
gene_biotype: protein_coding
description:
  Alpha glucuronidase; Identified by similarity to SP:P96105; Belongs to the glycosyl hydrolase 67 family.


ensembl_gene_id: ACP_2417
symbol: ACP_2417
gene_biotype: protein_coding
description:
  Oxidoreductase, short-chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106; match to protein family HMM PF08659.


ensembl_gene_id: ACP_2418
symbol: ACP_2418
gene_biotype: protein_coding
description:
  Molybdopterin oxidoreductase; Identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: ACP_2419
symbol: ACP_2419
gene_biotype: protein_coding
description:
  Outer membrane protein, OMP85 family; Identified by match to protein family HMM PF01103; match to protein family HMM PF07244; match to protein family HMM TIGR03303.


ensembl_gene_id: ACP_2423
symbol: ACP_2423
gene_biotype: protein_coding
description:
  Threonyl and Alanyl tRNA synthetase/DHHA1 domain protein; Identified by match to protein family HMM PF02272; match to protein family HMM PF07973.


ensembl_gene_id: ACP_2424
symbol: msrA
gene_biotype: protein_coding
description:
  methionine-S-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: ACP_2429
symbol: ACP_2429
gene_biotype: protein_coding
description:
  Glycosyl hydrolase, family 2; Identified by match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837; Belongs to the glycosyl hydrolase 2 family.


ensembl_gene_id: ACP_2430
symbol: kdsC
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Identified by similarity to SP:P45396; match to protein family HMM TIGR01670.


ensembl_gene_id: ACP_2431
symbol: ACP_2431
gene_biotype: protein_coding
description:
  Peptidase, S9A/B/C family; Identified by match to protein family HMM PF00326; match to protein family HMM PF07676.


ensembl_gene_id: ACP_2432
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: ACP_2433
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: ACP_2434
symbol: hemG1
gene_biotype: protein_coding
description:
  Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.


ensembl_gene_id: ACP_2435
symbol: coxB
gene_biotype: protein_coding
description:
  Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).


ensembl_gene_id: ACP_2437
symbol: coxA
gene_biotype: protein_coding
description:
  Cytochrome c oxidase, subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.


ensembl_gene_id: ACP_2442
symbol: ACP_2442
gene_biotype: protein_coding
description:
  Putative ubiquinol-cytochrome c reductase, cytochrome b subunit; Identified by similarity to SP:P08502; match to protein family HMM PF00033.


ensembl_gene_id: ACP_2445
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: ACP_2453
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: ACP_2455
symbol: ahcY
gene_biotype: protein_coding
description:
  Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: ACP_2459
symbol: ada
gene_biotype: protein_coding
description:
  ADA regulatory protein; Identified by similarity to SP:P06134; match to protein family HMM PF00165; match to protein family HMM PF01035; match to protein family HMM PF02805; match to protein family HMM PF02870; match to protein family HMM TIGR00589.


ensembl_gene_id: ACP_2461
symbol: purB
gene_biotype: protein_coding
description:
  Adenylosuccinate lyase; Identified by match to protein family HMM PF00206; match to protein family HMM TIGR00928; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.


ensembl_gene_id: ACP_2462
symbol: ubiX
gene_biotype: protein_coding
description:
  3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: ACP_2464
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: ACP_2465
symbol: kduD
gene_biotype: protein_coding
description:
  2-deoxy-D-gluconate 3-dehydrogenase; Identified by similarity to SP:P37769; match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659.


ensembl_gene_id: ACP_2466
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: ACP_2467
symbol: ACP_2467
gene_biotype: protein_coding
description:
  GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00254.


ensembl_gene_id: ACP_2468
symbol: ACP_2468
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:AAU23474.1; match to protein family HMM PF06912.


ensembl_gene_id: ACP_2469
symbol: ACP_2469
gene_biotype: protein_coding
description:
  NADH dehydrogenase; Identified by similarity to GB:AAC46302.1; match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF07992.


ensembl_gene_id: ACP_2474
symbol: ilvE
gene_biotype: protein_coding
description:
  Branched-chain-amino-acid transaminase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: ACP_2475
symbol: ACP_2475
gene_biotype: protein_coding
description:
  Membrane protein, MarC family; Identified by match to protein family HMM PF01914; match to protein family HMM TIGR00427.


ensembl_gene_id: ACP_2484
symbol: ACP_2484
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to PIR:A75262; match to protein family HMM PF03060.


ensembl_gene_id: ACP_2495
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: ACP_2506
symbol: ACP_2506
gene_biotype: protein_coding
description:
  Two-component system response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM PF07728.


ensembl_gene_id: ACP_2507
symbol: ACP_2507
gene_biotype: protein_coding
description:
  Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.


ensembl_gene_id: ACP_2516
symbol: ACP_2516
gene_biotype: protein_coding
description:
  Putative organic hydroperoxide resistance protein; Identified by similarity to SP:O68390; match to protein family HMM PF02566.


ensembl_gene_id: ACP_2530
symbol: ACP_2530
gene_biotype: protein_coding
description:
  MFS transporter, SP family; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00879; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: ACP_2534
symbol: ACP_2534
gene_biotype: protein_coding
description:
  ABC transporter, probable glycolipid exporter (DevE) family, permease protein; Identified by match to protein family HMM PF02687.


ensembl_gene_id: ACP_2541
symbol: pgsA1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Identified by similarity to SP:P46322; match to protein family HMM PF01066; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: ACP_2544
symbol: icsS2
gene_biotype: protein_coding
description:
  Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.


ensembl_gene_id: ACP_2545
symbol: iscU
gene_biotype: protein_coding
description:
  FeS cluster assembly scaffold IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.


ensembl_gene_id: ACP_2546
symbol: ACP_2546
gene_biotype: protein_coding
description:
  Iron-sulfur cluster assembly accessory protein; Identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049; Belongs to the HesB/IscA family.


ensembl_gene_id: ACP_2547
symbol: hscB
gene_biotype: protein_coding
description:
  Fe-S protein assembly co-chaperone HscB; Identified by similarity to SP:P36540; match to protein family HMM PF00226.


ensembl_gene_id: ACP_2549
symbol: hscA
gene_biotype: protein_coding
description:
  Fe-S protein assembly chaperone HscA; Identified by match to protein family HMM PF00012; match to protein family HMM TIGR01991; Belongs to the heat shock protein 70 family.


ensembl_gene_id: ACP_2551
symbol: iscX
gene_biotype: protein_coding
description:
  FeS assembly protein IscX; Identified by similarity to GB:BAC90157.1; match to protein family HMM PF04384; match to protein family HMM TIGR03412.


ensembl_gene_id: ACP_2552
symbol: pstS1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, periplasmic phosphate-binding protein PstS; Identified by similarity to SP:P06128; match to protein family HMM PF01547; match to protein family HMM TIGR00975; Belongs to the PstS family.


ensembl_gene_id: ACP_2553
symbol: pstC
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: ACP_2554
symbol: pstA
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, permease protein PstA; Identified by similarity to SP:P07654; match to protein family HMM PF00528; match to protein family HMM TIGR00974.


ensembl_gene_id: ACP_2558
symbol: ACP_2558
gene_biotype: protein_coding
description:
  Phenazine biosynthesis protein, PhzF family; Identified by match to protein family HMM PF02567; match to protein family HMM TIGR00654.


ensembl_gene_id: ACP_2560
symbol: ACP_2560
gene_biotype: protein_coding
description:
  Efflux ABC transporter, lipoprotein translocase (LPT) family, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF02463.


ensembl_gene_id: ACP_2563
symbol: ACP_2563
gene_biotype: protein_coding
description:
  Putative addiction module killer protein; Identified by match to protein family HMM PF05973; match to protein family HMM TIGR02683.


ensembl_gene_id: ACP_2565
symbol: ACP_2565
gene_biotype: protein_coding
description:
  NADH dehydrogenase I, A subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain.


ensembl_gene_id: ACP_2567
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH dehydrogenase domain protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: ACP_2569
symbol: nuoI
gene_biotype: protein_coding
description:
  NADH dehydrogenase I, I subunit; Identified by similarity to SP:P33604; match to protein family HMM PF00037.


ensembl_gene_id: ACP_2577
symbol: ACP_2577
gene_biotype: protein_coding
description:
  DNA internalization-related competence protein ComEC/Rec2; Identified by match to protein family HMM PF00753; match to protein family HMM PF03772; match to protein family HMM TIGR00360; match to protein family HMM TIGR00361.


ensembl_gene_id: ACP_2578
symbol: rumA
gene_biotype: protein_coding
description:
  23S rRNA (uracil-5-)-methyltransferase; Identified by similarity to SP:P55135; match to protein family HMM PF01938; match to protein family HMM PF05958; match to protein family HMM TIGR00479; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: ACP_2580
symbol: coaX
gene_biotype: protein_coding
description:
  Transcriptional activator, putative, Baf family; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis; Belongs to the type III pantothenate kinase family.


ensembl_gene_id: ACP_2581
symbol: ACP_2581
gene_biotype: protein_coding
description:
  biotin--acetyl-CoA-carboxylase ligase; Identified by match to protein family HMM PF03099; match to protein family HMM TIGR00121.


ensembl_gene_id: ACP_2582
symbol: nadC
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide pyrophosphorylase; Identified by match to protein family HMM PF01729; match to protein family HMM PF02749; match to protein family HMM TIGR00078; Belongs to the NadC/ModD family.


ensembl_gene_id: ACP_2583
symbol: valS
gene_biotype: protein_coding
description:
  valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: ACP_2585
symbol: rpe
gene_biotype: protein_coding
description:
  Ribulose-phosphate 3-epimerase; Identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; Belongs to the ribulose-phosphate 3-epimerase family.


ensembl_gene_id: ACP_2589
symbol: ACP_2589
gene_biotype: protein_coding
description:
  Pseudouridine synthase rsuA family protein; Identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: ACP_2590
symbol: scpB
gene_biotype: protein_coding
description:
  Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: ACP_2591
symbol: scpA
gene_biotype: protein_coding
description:
  Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: ACP_2592
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophanyl-tRNA synthetase TrpS; Identified by match to protein family HMM PF00579; match to protein family HMM TIGR00233; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: ACP_2598
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: ACP_2599
symbol: ACP_2599
gene_biotype: protein_coding
description:
  Peptidase, S53 family; Identified by match to protein family HMM PF00082; match to protein family HMM PF09286.


ensembl_gene_id: ACP_2612
symbol: sucC
gene_biotype: protein_coding
description:
  succinyl-CoA synthase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: ACP_2614
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase alpha chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: ACP_2617
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: ACP_2630
symbol: ACP_2630
gene_biotype: protein_coding
description:
  High-affinity nickel uptake transporter; Identified by similarity to SP:P23516; match to protein family HMM PF03824; match to protein family HMM TIGR00802; Belongs to the NiCoT transporter (TC 2.A.52) family.


ensembl_gene_id: ACP_2631
symbol: typA
gene_biotype: protein_coding
description:
  GTP-binding protein TypA; Identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF01926; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR01394.


ensembl_gene_id: ACP_2632
symbol: ACP_2632
gene_biotype: protein_coding
description:
  Helix-turn-helix/cupin domain protein; Identified by match to protein family HMM PF01381; match to protein family HMM PF07883.


ensembl_gene_id: ACP_2633
symbol: ACP_2633
gene_biotype: protein_coding
description:
  Conserved hypothetical protein TIGR01777; Identified by match to protein family HMM PF01370; match to protein family HMM PF08338; match to protein family HMM TIGR01777.


ensembl_gene_id: ACP_2636
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.


ensembl_gene_id: ACP_2637
symbol: fabZ
gene_biotype: protein_coding
description:
  Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: ACP_2638
symbol: lpxA
gene_biotype: protein_coding
description:
  acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: ACP_2642
symbol: ACP_2642
gene_biotype: protein_coding
description:
  Transglycosylase, SLT family; Identified by match to protein family HMM PF01464; match to protein family HMM PF01476.


ensembl_gene_id: ACP_2643
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: ACP_2647
symbol: ACP_2647
gene_biotype: protein_coding
description:
  Dipeptidyl peptidase IV; Identified by match to protein family HMM PF00326; match to protein family HMM PF00930.


ensembl_gene_id: ACP_2648
symbol: ACP_2648
gene_biotype: protein_coding
description:
  Efflux ABC transporter, macrolide exporter (MacB) family, permease protein; Identified by similarity to SP:P75831; match to protein family HMM PF02687.


ensembl_gene_id: ACP_2649
symbol: ACP_2649
gene_biotype: protein_coding
description:
  Peptidase, M29 (aminopeptidase T) family; Identified by similarity to SP:P24828; match to protein family HMM PF02073.


ensembl_gene_id: ACP_2650
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: ACP_2651
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: ACP_2652
symbol: ACP_2652
gene_biotype: protein_coding
description:
  DNA ligase, ATP-dependent; Identified by similarity to SP:Q9HHC4; match to protein family HMM PF01068; match to protein family HMM PF04675; match to protein family HMM PF04679; match to protein family HMM TIGR00574.


ensembl_gene_id: ACP_2653
symbol: ACP_2653
gene_biotype: protein_coding
description:
  Inosine-uridine preferring nucleoside hydrolase family protein; Identified by match to protein family HMM PF01156.


ensembl_gene_id: ACP_2654
symbol: ACP_2654
gene_biotype: protein_coding
description:
  Zinc transporter ZitB; Identified by similarity to SP:P75757; match to protein family HMM PF01545; match to protein family HMM TIGR01297.


ensembl_gene_id: ACP_2656
symbol: hslV
gene_biotype: protein_coding
description:
  ATP-dependent protease HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: ACP_2657
symbol: hslU
gene_biotype: protein_coding
description:
  Heat shock protein HslVU, ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: ACP_2659
symbol: ACP_2659
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:BAB67576.1; match to protein family HMM PF02656.


ensembl_gene_id: ACP_2666
symbol: mntH
gene_biotype: protein_coding
description:
  NRAMP family Mn2+/Fe2+ transporter; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.


ensembl_gene_id: ACP_2667
symbol: dtxR
gene_biotype: protein_coding
description:
  Iron dependent regulatory protein; Identified by match to protein family HMM PF01325; match to protein family HMM PF02742; match to protein family HMM PF04023.


ensembl_gene_id: ACP_2674
symbol: ACP_2674
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:CAF24589.1; match to protein family HMM PF05114; Belongs to the UPF0276 family.


ensembl_gene_id: ACP_2677
symbol: ACP_2677
gene_biotype: protein_coding
description:
  Endo-polygalacturonase/pectinesterase; Identified by match to protein family HMM PF00295; match to protein family HMM PF01095.


ensembl_gene_id: ACP_2678
symbol: ACP_2678
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.


ensembl_gene_id: ACP_2679
symbol: ACP_2679
gene_biotype: protein_coding
description:
  Polygalacturonase; Identified by match to protein family HMM PF00295; Belongs to the glycosyl hydrolase 28 family.


ensembl_gene_id: ACP_2686
symbol: ACP_2686
gene_biotype: protein_coding
description:
  Pyruvate ferrodoxin oxidoreductase; Identified by similarity to GB:CAA70873.1; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.


ensembl_gene_id: ACP_2689
symbol: ACP_2689
gene_biotype: protein_coding
description:
  Non-specific serine/threonine protein kinase; Identified by similarity to SP:P33973; match to protein family HMM PF00069; match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07720.


ensembl_gene_id: ACP_2696
symbol: queE
gene_biotype: protein_coding
description:
  Radical SAM domain protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: ACP_2697
symbol: ACP_2697
gene_biotype: protein_coding
description:
  Putative 6-pyruvoyl tetrahydropterin synthase; Identified by match to protein family HMM PF01242; match to protein family HMM TIGR03367.


ensembl_gene_id: ACP_2699
symbol: cadA
gene_biotype: protein_coding
description:
  Cadmium-exporting ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525.


ensembl_gene_id: ACP_2700
symbol: ACP_2700
gene_biotype: protein_coding
description:
  Thioredoxin-disulfide reductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01292.


ensembl_gene_id: ACP_2704
symbol: ACP_2704
gene_biotype: protein_coding
description:
  AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF01553.


ensembl_gene_id: ACP_2709
symbol: pruA
gene_biotype: protein_coding
description:
  Delta-1-pyrroline-5-carboxylate dehydrogenase; Identified by similarity to SP:P39634; match to protein family HMM PF00171; match to protein family HMM TIGR01237.


ensembl_gene_id: ACP_2711
symbol: ACP_2711
gene_biotype: protein_coding
description:
  Pyridine nucleotide-disulphide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF00072; match to protein family HMM PF01266; match to protein family HMM PF07992.


ensembl_gene_id: ACP_2712
symbol: ACP_2712
gene_biotype: protein_coding
description:
  Two-component sensor histidine kinase all1088; Identified by match to protein family HMM PF00027; match to protein family HMM PF02518.


ensembl_gene_id: ACP_2714
symbol: motB2
gene_biotype: protein_coding
description:
  Chemotaxis protein MotB; Identified by similarity to SP:P09349; match to protein family HMM PF00691.


ensembl_gene_id: ACP_2715
symbol: ACP_2715
gene_biotype: protein_coding
description:
  Pyridine nucleotide-disulphide oxidoreductase; Identified by match to protein family HMM PF01494; match to protein family HMM PF05834.


ensembl_gene_id: ACP_2716
symbol: ACP_2716
gene_biotype: protein_coding
description:
  GAF/FHA/SpoE domain protein; Identified by match to protein family HMM PF00498; match to protein family HMM PF01590; match to protein family HMM PF07228.


ensembl_gene_id: ACP_2719
symbol: treY
gene_biotype: protein_coding
description:
  (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase; Identified by match to protein family HMM TIGR02401.


ensembl_gene_id: ACP_2720
symbol: treZ
gene_biotype: protein_coding
description:
  4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase; Identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02402.


ensembl_gene_id: ACP_2725
symbol: ACP_2725
gene_biotype: protein_coding
description:
  Tat pathway signal sequence domain protein; Identified by match to protein family HMM PF04185; match to protein family HMM TIGR01409.


ensembl_gene_id: ACP_2728
symbol: cysE
gene_biotype: protein_coding
description:
  Serine O-acetyltransferase; Identified by match to protein family HMM PF00132; match to protein family HMM TIGR01172.


ensembl_gene_id: ACP_2729
symbol: cysK2
gene_biotype: protein_coding
description:
  Cysteine synthase A; Identified by match to protein family HMM PF00291; match to protein family HMM TIGR01136; match to protein family HMM TIGR01139.


ensembl_gene_id: ACP_2730
symbol: ACP_2730
gene_biotype: protein_coding
description:
  Efflux ABC transporter, peptide-1 exporter (Pep1E) family, permease/ATP-binding protein; Identified by match to protein family HMM PF00005.


ensembl_gene_id: ACP_2733
symbol: aldH
gene_biotype: protein_coding
description:
  NADP-dependent fatty aldehyde dehydrogenase; Identified by similarity to SP:Q56694; match to protein family HMM PF00171.


ensembl_gene_id: ACP_2734
symbol: ACP_2734
gene_biotype: protein_coding
description:
  Transcription regulator, gntR family; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.


ensembl_gene_id: ACP_2736
symbol: ACP_2736
gene_biotype: protein_coding
description:
  Malate dehydrogenase (oxaloacetate-decarboxylating); Identified by similarity to SP:P26616; match to protein family HMM PF00390; match to protein family HMM PF03949.


ensembl_gene_id: ACP_2742
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: ACP_2746
symbol: rpmA
gene_biotype: protein_coding
description:
  Ribosomal protein L27; Identified by match to protein family HMM PF01016; match to protein family HMM TIGR00062; Belongs to the bacterial ribosomal protein bL27 family.


ensembl_gene_id: ACP_2747
symbol: rplU
gene_biotype: protein_coding
description:
  Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: ACP_2754
symbol: ACP_2754
gene_biotype: protein_coding
description:
  Sensory transduction histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229.


ensembl_gene_id: ACP_2760
symbol: ACP_2760
gene_biotype: protein_coding
description:
  ybaK/ebsC protein; Identified by similarity to SP:P36922; match to protein family HMM PF04073; match to protein family HMM TIGR00011; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.


ensembl_gene_id: ACP_2761
symbol: ACP_2761
gene_biotype: protein_coding
description:
  Efflux ABC transporter, ATP-binding protein; Identified by similarity to SP:P46903; match to protein family HMM PF00005.


ensembl_gene_id: ACP_2762
symbol: ACP_2762
gene_biotype: protein_coding
description:
  Putative cytochrome c-type biogenesis protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.


ensembl_gene_id: ACP_2763
symbol: thiC
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.


ensembl_gene_id: ACP_2765
symbol: clpC
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease, ATP-binding subunit ClpC; Identified by similarity to SP:P37571; similarity to GB:AAC44446.1; match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; Belongs to the ClpA/ClpB family.


ensembl_gene_id: ACP_2766
symbol: lolD2
gene_biotype: protein_coding
description:
  Lipoprotein-releasing system, ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.


ensembl_gene_id: ACP_2768
symbol: ACP_2768
gene_biotype: protein_coding
description:
  Lipoprotein releasing system, transmembrane protein, LolC/E family; Identified by match to protein family HMM PF02687.


ensembl_gene_id: ACP_2769
symbol: ACP_2769
gene_biotype: protein_coding
description:
  Conserved domain protein; Identified by similarity to GB:BAC89906.1; match to protein family HMM PF07494.


ensembl_gene_id: ACP_2774
symbol: xylB
gene_biotype: protein_coding
description:
  Xylulokinase; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01312.


ensembl_gene_id: ACP_2778
symbol: ACP_2778
gene_biotype: protein_coding
description:
  TonB-dependent receptor plug domain protein; Identified by similarity to SP:P38370; match to protein family HMM PF07715.


ensembl_gene_id: ACP_2784
symbol: ACP_2784
gene_biotype: protein_coding
description:
  Peptidase, S9A/B/C families, catalytic domain protein; Identified by match to protein family HMM PF00326.


ensembl_gene_id: ACP_2785
symbol: ACP_2785
gene_biotype: protein_coding
description:
  Putative phosphoglycolate phosphatase; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549.


ensembl_gene_id: ACP_2786
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...]


ensembl_gene_id: ACP_2787
symbol: araB
gene_biotype: protein_coding
description:
  Ribulokinase; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782.


ensembl_gene_id: ACP_2792
symbol: ACP_2792
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:AAO75244.1; match to protein family HMM PF07944; match to protein family HMM TIGR01409.


ensembl_gene_id: ACP_2793
symbol: ACP_2793
gene_biotype: protein_coding
description:
  Identified by similarity to SP:P82593; match to protein family HMM PF02018; match to protein family HMM PF06964.


ensembl_gene_id: ACP_2796
symbol: tdh
gene_biotype: protein_coding
description:
  L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family.


ensembl_gene_id: ACP_2803
symbol: rplS
gene_biotype: protein_coding
description:
  Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: ACP_2806
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: ACP_2807
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: ACP_2808
symbol: ACP_2808
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:CAE79962.1; Belongs to the UPF0109 family.


ensembl_gene_id: ACP_2809
symbol: rpsP
gene_biotype: protein_coding
description:
  Ribosomal protein S16; Identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; Belongs to the bacterial ribosomal protein bS16 family.


ensembl_gene_id: ACP_2810
symbol: ACP_2810
gene_biotype: protein_coding
description:
  Two-component hybrid sensor and regulator; Identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229.


ensembl_gene_id: ACP_2811
symbol: acsA
gene_biotype: protein_coding
description:
  acetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: ACP_2812
symbol: kdsB
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: ACP_2813
symbol: ACP_2813
gene_biotype: protein_coding
description:
  Transporter, major facilitator family; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.


ensembl_gene_id: ACP_2814
symbol: ACP_2814
gene_biotype: protein_coding
description:
  Putative two-component system response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196.


ensembl_gene_id: ACP_2818
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: ACP_2820
symbol: acad9
gene_biotype: protein_coding
description:
  acetyl-CoA dehydrogenase; Identified by similarity to SP:Q9H845; match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.


ensembl_gene_id: ACP_2822
symbol: ACP_2822
gene_biotype: protein_coding
description:
  Nonpeptidase homolog, peptidase S53 family; Identified by match to protein family HMM PF00082; match to protein family HMM PF09286.


ensembl_gene_id: ACP_2823
symbol: aehA
gene_biotype: protein_coding
description:
  Alpha-amino acid ester hydrolase; Identified by similarity to GB:AAL60195.1; match to protein family HMM PF02129; match to protein family HMM PF08530; match to protein family HMM TIGR00976.


ensembl_gene_id: ACP_2825
symbol: rph
gene_biotype: protein_coding
description:
  tRNA nucleotidyltransferase; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: ACP_2828
symbol: ACP_2828
gene_biotype: protein_coding
description:
  Sigma-54 dependent DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM PF07728.


ensembl_gene_id: ACP_2832
symbol: proS
gene_biotype: protein_coding
description:
  proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacy [...]


ensembl_gene_id: ACP_2835
symbol: vapC-2
gene_biotype: protein_coding
description:
  Mycobacterium tuberculosis PIN domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.


ensembl_gene_id: ACP_2836
symbol: ACP_2836
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:CAE55498.1; match to protein family HMM PF01402.


ensembl_gene_id: ACP_2837
symbol: ACP_2837
gene_biotype: protein_coding
description:
  methylmalonyl-CoA mutase domain protein; Identified by match to protein family HMM PF02310; match to protein family HMM TIGR00640.


ensembl_gene_id: ACP_2839
symbol: ACP_2839
gene_biotype: protein_coding
description:
  Octaprenyl-diphosphate synthase; Identified by similarity to SP:P19641; match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: ACP_2840
symbol: ACP_2840
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:AAR36595.1; match to protein family HMM PF04461; Belongs to the UPF0234 family.


ensembl_gene_id: ACP_2841
symbol: ACP_2841
gene_biotype: protein_coding
description:
  Hydrolase, TatD family; Identified by match to protein family HMM PF01026; match to protein family HMM TIGR00010.


ensembl_gene_id: ACP_2842
symbol: metG
gene_biotype: protein_coding
description:
  methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: ACP_2843
symbol: argS
gene_biotype: protein_coding
description:
  arginine--tRNA ligase; Identified by similarity to SP:P11875; match to protein family HMM PF00750; match to protein family HMM PF03485; match to protein family HMM PF05746; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: ACP_2846
symbol: glyA
gene_biotype: protein_coding
description:
  Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: ACP_2849
symbol: gatB
gene_biotype: protein_coding
description:
  glutamyl-tRNA(Gln) amidotransferase, B subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: ACP_2857
symbol: lpdA
gene_biotype: protein_coding
description:
  Dihydrolipoyl dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF00890; match to protein family HMM PF01134; match to protein family HMM PF01266; match to protein family HMM PF02852; match to protein family HMM PF03486; match to protein family HMM PF07992; match to protein family HMM TIGR01350.


ensembl_gene_id: ACP_2858
symbol: ACP_2858
gene_biotype: protein_coding
description:
  Peptidase, M56 family/TonB domain protein; Identified by match to protein family HMM PF05569; match to protein family HMM TIGR01352.


ensembl_gene_id: ACP_2861
symbol: lipB
gene_biotype: protein_coding
description:
  Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: ACP_2862
symbol: copR
gene_biotype: protein_coding
description:
  Transcriptional activator protein copR; Identified by similarity to SP:Q02540; match to protein family HMM PF00072; match to protein family HMM PF00486.


ensembl_gene_id: ACP_2863
symbol: ACP_2863
gene_biotype: protein_coding
description:
  Two-component hybrid sensor and regulator, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.


ensembl_gene_id: ACP_2864
symbol: kup
gene_biotype: protein_coding
description:
  Potassium uptake protein; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family.


ensembl_gene_id: ACP_2868
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.


ensembl_gene_id: ACP_2871
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: ACP_2876
symbol: efp
gene_biotype: protein_coding
description:
  Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: ACP_2879
symbol: trpG
gene_biotype: protein_coding
description:
  Anthranilate synthase component II; Identified by similarity to PIR:A01122; match to protein family HMM PF00117; match to protein family HMM TIGR00566.


ensembl_gene_id: ACP_2882
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...]


ensembl_gene_id: ACP_2883
symbol: gdhA
gene_biotype: protein_coding
description:
  Glutamate dehydrogenase; Identified by similarity to SP:P96110; match to protein family HMM PF00208; match to protein family HMM PF02812; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: ACP_2887
symbol: pgsA2
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Identified by similarity to SP:P46322; match to protein family HMM PF01066; match to protein family HMM TIGR00560; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: ACP_2888
symbol: ppGpp
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: ACP_2889
symbol: ACP_2889
gene_biotype: protein_coding
description:
  rhodanese/MoeB/ThiF domain protein; Identified by match to protein family HMM PF00581; match to protein family HMM PF00899; match to protein family HMM PF05237.


ensembl_gene_id: ACP_2892
symbol: ACP_2892
gene_biotype: protein_coding
description:
  Putative cysteine synthase B; Identified by match to protein family HMM PF00291; match to protein family HMM TIGR01136.


ensembl_gene_id: ACP_2902
symbol: ACP_2902
gene_biotype: protein_coding
description:
  Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293; Belongs to the Nudix hydrolase family.


ensembl_gene_id: ACP_2904
symbol: rsmI
gene_biotype: protein_coding
description:
  Tetrapyrrole methylase family protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: ACP_2905
symbol: ACP_2905
gene_biotype: protein_coding
description:
  Peptidase, M50 family; Identified by match to protein family HMM PF00571; match to protein family HMM PF02163; Belongs to the peptidase M50B family.


ensembl_gene_id: ACP_2906
symbol: ACP_2906
gene_biotype: protein_coding
description:
  Putative methyltransferase; Identified by match to protein family HMM PF03602; match to protein family HMM TIGR00095.


ensembl_gene_id: ACP_2907
symbol: ACP_2907
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:CAD16765.1; match to protein family HMM PF04014.


ensembl_gene_id: ACP_2909
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine-phosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: ACP_2919
symbol: ACP_2919
gene_biotype: protein_coding
description:
  Translation elongation factor Tu; Identified by match to protein family HMM PF00009; match to protein family HMM PF03143; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR00485.


ensembl_gene_id: ACP_2920
symbol: rpmG
gene_biotype: protein_coding
description:
  Ribosomal protein L33; Identified by match to protein family HMM PF00471; match to protein family HMM TIGR01023; Belongs to the bacterial ribosomal protein bL33 family.


ensembl_gene_id: ACP_2922
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: ACP_2923
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription termination/antitermination factor NusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: ACP_2924
symbol: rplK
gene_biotype: protein_coding
description:
  Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: ACP_2925
symbol: rplA
gene_biotype: protein_coding
description:
  Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: ACP_2926
symbol: rplJ
gene_biotype: protein_coding
description:
  Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: ACP_2927
symbol: rplL
gene_biotype: protein_coding
description:
  Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: ACP_2928
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: ACP_2931
symbol: metE
gene_biotype: protein_coding
description:
  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.


ensembl_gene_id: ACP_2936
symbol: moaA
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: ACP_2943
symbol: emrB
gene_biotype: protein_coding
description:
  Identified by similarity to SP:P27304; match to protein family HMM PF07690; match to protein family HMM TIGR00711; Belongs to the major facilitator superfamily.


ensembl_gene_id: ACP_2944
symbol: rplM
gene_biotype: protein_coding
description:
  Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: ACP_2945
symbol: rpsI
gene_biotype: protein_coding
description:
  Ribosomal protein S9; Identified by match to protein family HMM PF00380; Belongs to the universal ribosomal protein uS9 family.


ensembl_gene_id: ACP_2946
symbol: rpsB
gene_biotype: protein_coding
description:
  Ribosomal protein S2; Identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011; Belongs to the universal ribosomal protein uS2 family.


ensembl_gene_id: ACP_2947
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: ACP_2948
symbol: ACP_2948
gene_biotype: protein_coding
description:
  Peptidase, S41B (tricorn core protease) family; Degrades oligopeptides; Belongs to the peptidase S41B family.


ensembl_gene_id: ACP_2957
symbol: cbg-1
gene_biotype: protein_coding
description:
  Beta-glucosidase; Identified by similarity to SP:P27034; match to protein family HMM PF00933; match to protein family HMM PF01915; Belongs to the glycosyl hydrolase 3 family.


ensembl_gene_id: ACP_2958
symbol: pstS2
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, phosphate-binding protein PstS; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR00975; Belongs to the PstS family.


ensembl_gene_id: ACP_2959
symbol: pepA
gene_biotype: protein_coding
description:
  Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: ACP_2960
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: ACP_2961
symbol: ACP_2961
gene_biotype: protein_coding
description:
  Type II/III secretion system protein; Identified by match to protein family HMM PF00263; match to protein family HMM PF03958; Belongs to the bacterial secretin family.


ensembl_gene_id: ACP_2962
symbol: ACP_2962
gene_biotype: protein_coding
description:
  Putative secretion protein; Identified by similarity to GB:AAM62415.1; match to protein family HMM PF07963; match to protein family HMM TIGR02532.


ensembl_gene_id: ACP_2963
symbol: ACP_2963
gene_biotype: protein_coding
description:
  Prepilin-type N-terminal cleavage/methylation domain protein; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532.


ensembl_gene_id: ACP_2964
symbol: ysxC
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTP-binding protein YsxC; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: ACP_2967
symbol: mmgB
gene_biotype: protein_coding
description:
  3-hydroxyacyl-CoA dehydrogenase; Identified by similarity to SP:P45856; match to protein family HMM PF00725; match to protein family HMM PF02737.


ensembl_gene_id: ACP_2970
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase, catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate.


ensembl_gene_id: ACP_2972
symbol: otsA
gene_biotype: protein_coding
description:
  Alpha,alpha-trehalose-phosphate synthase; Identified by similarity to SP:Q92410; match to protein family HMM PF00982.


ensembl_gene_id: ACP_2973
symbol: ACP_2973
gene_biotype: protein_coding
description:
  Identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; Belongs to the anti-sigma-factor antagonist family.


ensembl_gene_id: ACP_2976
symbol: ACP_2976
gene_biotype: protein_coding
description:
  Cation transporter, Mg2+ transporter-E (MgtE) family; Identified by match to protein family HMM PF00571; match to protein family HMM PF03448.


ensembl_gene_id: ACP_2977
symbol: ACP_2977
gene_biotype: protein_coding
description:
  Metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family; Identified by match to protein family HMM PF01566.


ensembl_gene_id: ACP_2979
symbol: ACP_2979
gene_biotype: protein_coding
description:
  Iron complex transport system substrate-binding protein; Identified by match to protein family HMM PF01497.


ensembl_gene_id: ACP_2981
symbol: xerC
gene_biotype: protein_coding
description:
  Putative tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: ACP_2982
symbol: xerC-2
gene_biotype: protein_coding
description:
  Putative tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: ACP_2983
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: ACP_2985
symbol: ACP_2985
gene_biotype: protein_coding
description:
  Sua5/YciO/YrdC/YwlC family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: ACP_2989
symbol: tmk
gene_biotype: protein_coding
description:
  dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: ACP_2991
symbol: argH
gene_biotype: protein_coding
description:
  Argininosuccinate lyase; Identified by match to protein family HMM PF00206; match to protein family HMM TIGR00838.


ensembl_gene_id: ACP_2992
symbol: argF
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: ACP_2993
symbol: argD
gene_biotype: protein_coding
description:
  Acetylornithine transaminase; Identified by similarity to SP:P54752; match to protein family HMM PF00202; match to protein family HMM TIGR00707; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: ACP_2994
symbol: argB
gene_biotype: protein_coding
description:
  Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: ACP_2995
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: ACP_2997
symbol: gltB
gene_biotype: protein_coding
description:
  NADPH-dependent glutamate synthetase; Identified by similarity to SP:Q05755; match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.


ensembl_gene_id: ACP_3000
symbol: ACP_3000
gene_biotype: protein_coding
description:
  Peptidase, S9A family; Identified by match to protein family HMM PF00326; match to protein family HMM PF02897.


ensembl_gene_id: ACP_3003
symbol: ACP_3003
gene_biotype: protein_coding
description:
  Putative membrane protein; Identified by match to protein family HMM PF03649; match to protein family HMM TIGR00245.


ensembl_gene_id: ACP_3004
symbol: ACP_3004
gene_biotype: protein_coding
description:
  Phosphate import ATP-binding protein pstB 1; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily.


ensembl_gene_id: ACP_3005
symbol: ACP_3005
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:AAR34852.1; match to protein family HMM PF04536.


ensembl_gene_id: ACP_3008
symbol: serS
gene_biotype: protein_coding
description:
  serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: ACP_3012
symbol: ACP_3012
gene_biotype: protein_coding
description:
  Polysaccharide deacetylase domain protein/glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535; match to protein family HMM PF01522.


ensembl_gene_id: ACP_3015
symbol: gdh
gene_biotype: protein_coding
description:
  Glucose 1-dehydrogenase; Identified by similarity to SP:P12310; match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659.


ensembl_gene_id: ACP_3019
symbol: ACP_3019
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:AAM71980.1; match to protein family HMM PF07843.


ensembl_gene_id: ACP_3020
symbol: nirA
gene_biotype: protein_coding
description:
  Nitrite reductase; Identified by similarity to GB:BAA06530.1; match to protein family HMM PF01077; match to protein family HMM PF03460; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: ACP_3025
symbol: ACP_3025
gene_biotype: protein_coding
description:
  Sugar MFS transporter, fucose:H+ symporter (FHS) family; Identified by similarity to SP:Q44623; match to protein family HMM PF07690; match to protein family HMM TIGR01272.


ensembl_gene_id: ACP_3026
symbol: hutH
gene_biotype: protein_coding
description:
  Histidine ammonia-lyase; Identified by match to protein family HMM PF00221; match to protein family HMM TIGR01225.


ensembl_gene_id: ACP_3028
symbol: ddc
gene_biotype: protein_coding
description:
  aromatic-L-amino-acid decarboxylase; Identified by similarity to GB:CAB71551.1; match to protein family HMM PF00266; match to protein family HMM PF00282; match to protein family HMM PF01212.


ensembl_gene_id: ACP_3030
symbol: ACP_3030
gene_biotype: protein_coding
description:
  Radical SAM domain protein; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR03471.


ensembl_gene_id: ACP_3035
symbol: queF
gene_biotype: protein_coding
description:
  GTP cyclohydrolase family protein; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.


ensembl_gene_id: ACP_3039
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: ACP_3040
symbol: ACP_3040
gene_biotype: protein_coding
description:
  O-Glycosyl hydrolase, family 30; Identified by match to protein family HMM PF02055; match to protein family HMM TIGR01409.


ensembl_gene_id: ACP_3041
symbol: ACP_3041
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to PIR:S74867; match to protein family HMM PF00578; match to protein family HMM PF08534.


ensembl_gene_id: ACP_3042
symbol: ACP_3042
gene_biotype: protein_coding
description:
  Transcription regulator FurR family; Identified by match to protein family HMM PF01475; Belongs to the Fur family.


ensembl_gene_id: ACP_3043
symbol: ahpC
gene_biotype: protein_coding
description:
  Alkylhydroperoxide reductase C; Identified by similarity to GB:AAC61301.1; match to protein family HMM PF00578; match to protein family HMM PF08534.


ensembl_gene_id: ACP_3044
symbol: ahpD
gene_biotype: protein_coding
description:
  Alkyl hydroperoxide reductase D; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: ACP_3048
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: ACP_3049
symbol: msrP
gene_biotype: protein_coding
description:
  Oxidoreductase, molybdopterin-binding; Part of the MsrPQ system that repairs oxidized cell envelope proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated cell envelope proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers o [...]


ensembl_gene_id: ACP_3050
symbol: msrQ
gene_biotype: protein_coding
description:
  Putative membrane protein; Part of the MsrPQ system that repairs oxidized cell envelope proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated cell envelope proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory [...]


ensembl_gene_id: ACP_3052
symbol: ACP_3052
gene_biotype: protein_coding
description:
  Nickel-dependent hydrogenase, small subunit; Identified by match to protein family HMM PF01058; match to protein family HMM PF08425; match to protein family HMM TIGR00391; match to protein family HMM TIGR01409.


ensembl_gene_id: ACP_3053
symbol: ACP_3053
gene_biotype: protein_coding
description:
  Nickel-dependent hydrogenase, large subunit; Identified by match to protein family HMM PF00374; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.


ensembl_gene_id: ACP_3054
symbol: ACP_3054
gene_biotype: protein_coding
description:
  Nickel-iron hydrogenase, b-type cytochrome subunit; Identified by match to protein family HMM PF01292; match to protein family HMM TIGR02125.


ensembl_gene_id: ACP_3055
symbol: ACP_3055
gene_biotype: protein_coding
description:
  Hydrogenase maturation protease; Identified by match to protein family HMM PF01750; match to protein family HMM TIGR00072.


ensembl_gene_id: ACP_3056
symbol: hypA
gene_biotype: protein_coding
description:
  Putative hydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.


ensembl_gene_id: ACP_3057
symbol: hypB
gene_biotype: protein_coding
description:
  Hydrogenase accessory protein HypB; Identified by similarity to SP:P24190; match to protein family HMM PF02492; match to protein family HMM TIGR00073.


ensembl_gene_id: ACP_3058
symbol: hypE
gene_biotype: protein_coding
description:
  Hydrogenase expression/formation protein HypE; Identified by similarity to SP:P40595; match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR02124.


ensembl_gene_id: ACP_3059
symbol: hypD
gene_biotype: protein_coding
description:
  Hydrogenase expression/formation protein HypD; Identified by similarity to SP:P24192; match to protein family HMM PF01924; match to protein family HMM TIGR00075.


ensembl_gene_id: ACP_3060
symbol: hypC
gene_biotype: protein_coding
description:
  Hydrogenase assembly chaperone HypC/HupF; Identified by match to protein family HMM PF01455; match to protein family HMM TIGR00074.


ensembl_gene_id: ACP_3061
symbol: hypF
gene_biotype: protein_coding
description:
  (NiFe) hydrogenase maturation protein HypF; Identified by similarity to SP:O07451; match to protein family HMM PF00708; match to protein family HMM PF01300; match to protein family HMM PF07503; match to protein family HMM TIGR00143.


ensembl_gene_id: ACP_3064
symbol: ACP_3064
gene_biotype: protein_coding
description:
  Transporter, major facilitator family; Identified by similarity to SP:P43531; match to protein family HMM PF00083; match to protein family HMM PF07690.


ensembl_gene_id: ACP_3068
symbol: ppc
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase (GTP); Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family.


ensembl_gene_id: ACP_3075
symbol: ACP_3075
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:CAD73230.1; match to protein family HMM PF07632.


ensembl_gene_id: ACP_3079
symbol: ACP_3079
gene_biotype: protein_coding
description:
  Cupin domain protein; Identified by match to protein family HMM PF02678; match to protein family HMM PF05726; Belongs to the pirin family.


ensembl_gene_id: ACP_3084
symbol: ACP_3084
gene_biotype: protein_coding
description:
  Putative tRNA-dihydrouridine synthase; Identified by match to protein family HMM PF01207; match to protein family HMM TIGR00737.


ensembl_gene_id: ACP_3085
symbol: serB
gene_biotype: protein_coding
description:
  ACT domain protein/phosphoserine phosphatase SerB; Identified by match to protein family HMM PF00702; match to protein family HMM PF01842; match to protein family HMM PF08282; match to protein family HMM TIGR00338; match to protein family HMM TIGR01488.


ensembl_gene_id: ACP_3090
symbol: ACP_3090
gene_biotype: protein_coding
description:
  Thiamine pyrophosphate requiring enzyme; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; Belongs to the TPP enzyme family.


ensembl_gene_id: ACP_3091
symbol: ACP_3091
gene_biotype: protein_coding
description:
  Mandelate racemase/muconate lactonizing enzyme family protein; Identified by match to protein family HMM PF01188; match to protein family HMM PF02746.


ensembl_gene_id: ACP_3095
symbol: mtgA
gene_biotype: protein_coding
description:
  Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.


ensembl_gene_id: ACP_3096
symbol: argG
gene_biotype: protein_coding
description:
  Argininosuccinate synthase; Identified by match to protein family HMM PF00764; match to protein family HMM TIGR00032; Belongs to the argininosuccinate synthase family. Type 2 subfamily.


ensembl_gene_id: ACP_3099
symbol: azoR
gene_biotype: protein_coding
description:
  Acyl carrier protein phosphodiesterase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.


ensembl_gene_id: ACP_3110
symbol: ACP_3110
gene_biotype: protein_coding
description:
  Type 4 fimbrial assembly protein; Identified by similarity to GB:AAT00614.1; match to protein family HMM PF00437; match to protein family HMM PF05157.


ensembl_gene_id: ACP_3111
symbol: ACP_3111
gene_biotype: protein_coding
description:
  Putative type 4 fimbrial assembly protein PilC; Identified by similarity to GB:AAT00616.1; match to protein family HMM PF00482.


ensembl_gene_id: ACP_3113
symbol: ACP_3113
gene_biotype: protein_coding
description:
  Outer membrane lipoprotein carrier protein, LolA family; Identified by match to protein family HMM PF03548.


ensembl_gene_id: ACP_3115
symbol: ACP_3115
gene_biotype: protein_coding
description:
  Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993.


ensembl_gene_id: ACP_3117
symbol: ACP_3117
gene_biotype: protein_coding
description:
  Putative iron-sulfur cluster binding protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF08331.


ensembl_gene_id: ACP_3120
symbol: ACP_3120
gene_biotype: protein_coding
description:
  HAMP domain protein; Identified by match to protein family HMM PF00672; match to protein family HMM PF07228.


ensembl_gene_id: ACP_3123
symbol: ACP_3123
gene_biotype: protein_coding
description:
  Carboxyl-terminal protease; Identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; Belongs to the peptidase S41A family.


ensembl_gene_id: ACP_3124
symbol: ACP_3124
gene_biotype: protein_coding
description:
  Peptidylprolyl cis-trans isomerase SurA, putative; Identified by similarity to SP:P21202; match to protein family HMM PF00639; match to protein family HMM PF09312.


ensembl_gene_id: ACP_3125
symbol: ACP_3125
gene_biotype: protein_coding
description:
  OB-fold nucleic acid binding domain protein/HD domain protein; Identified by match to protein family HMM PF01336; match to protein family HMM PF01966.


ensembl_gene_id: ACP_3126
symbol: ACP_3126
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:BAD42151.1; match to protein family HMM PF01878.


ensembl_gene_id: ACP_3127
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: ACP_3128
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: ACP_3129
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: ACP_3130
symbol: ACP_3130
gene_biotype: protein_coding
description:
  Putative ribosomal RNA small subunit methyltransferase B; Identified by match to protein family HMM PF01029; match to protein family HMM PF01189; match to protein family HMM PF05175; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: ACP_3132
symbol: ACP_3132
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:CAE12691.1; match to protein family HMM PF02566.


ensembl_gene_id: ACP_3133
symbol: ACP_3133
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; Identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: ACP_3134
symbol: ubiE
gene_biotype: protein_coding
description:
  Menaquinone biosynthesis methyltransferase ubiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).


ensembl_gene_id: ACP_3135
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.


ensembl_gene_id: ACP_3143
symbol: tatC
gene_biotype: protein_coding
description:
  Sec-independent protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.


ensembl_gene_id: ACP_3145
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: ACP_3149
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: ACP_3156
symbol: ACP_3156
gene_biotype: protein_coding
description:
  Putative pyruvate dehydrogenase, E1 component; Identified by match to protein family HMM PF00676; match to protein family HMM PF02779; match to protein family HMM PF02780.


ensembl_gene_id: ACP_3157
symbol: hppA
gene_biotype: protein_coding
description:
  V-type H(+)-translocating pyrophosphatase; Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force.


ensembl_gene_id: ACP_3159
symbol: nnrD
gene_biotype: protein_coding
description:
  YjeF family protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...]


ensembl_gene_id: ACP_3160
symbol: ACP_3160
gene_biotype: protein_coding
description:
  Conserved hypothetical protein TIGR00150; Identified by similarity to GB:AAN53677.1; match to protein family HMM PF02367; match to protein family HMM TIGR00150.


ensembl_gene_id: ACP_3161
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: ACP_3166
symbol: ACP_3166
gene_biotype: protein_coding
description:
  Transporter, type IV (conjugal DNA-protein transfer or VirB) secretory pathway (IVSP) family; Identified by match to protein family HMM PF05101.


ensembl_gene_id: ACP_3183
symbol: dndE
gene_biotype: protein_coding
description:
  DNA sulfur modification protein DndE; Identified by match to protein family HMM PF08870; match to protein family HMM TIGR03184.


ensembl_gene_id: ACP_3184
symbol: dndD
gene_biotype: protein_coding
description:
  DNA sulfur modification protein DndD; Identified by similarity to GB:BAC70641.1; match to protein family HMM TIGR03185.


ensembl_gene_id: ACP_3185
symbol: dndC
gene_biotype: protein_coding
description:
  Putative sulfurtransferase DndC; Identified by match to protein family HMM PF01507; match to protein family HMM TIGR03183.


ensembl_gene_id: ACP_3186
symbol: dndB
gene_biotype: protein_coding
description:
  DNA sulfur modification protein DndB; Identified by similarity to GB:BAC70643.1; match to protein family HMM TIGR03187; match to protein family HMM TIGR03233.


ensembl_gene_id: ACP_3187
symbol: dndA
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Identified by match to protein family HMM PF00266; match to protein family HMM TIGR03235.


ensembl_gene_id: ACP_3189
symbol: ACP_3189
gene_biotype: protein_coding
description:
  Putative helicase, ATP-dependent; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851.


ensembl_gene_id: ACP_3196
symbol: ACP_3196
gene_biotype: protein_coding
description:
  Identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; Belongs to the ParB family.


ensembl_gene_id: ACP_3197
symbol: dnaE2
gene_biotype: protein_coding
description:
  DNA polymerase III, alpha subunit; Identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594; Belongs to the DNA polymerase type-C family. DnaE2 subfamily.


ensembl_gene_id: ACP_3200
symbol: ACP_3200
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to PIR:AC2205; match to protein family HMM PF02586; Belongs to the SOS response-associated peptidase family.


ensembl_gene_id: ACP_3207
symbol: ACP_3207
gene_biotype: protein_coding
description:
  Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687; match to protein family HMM TIGR03434.


ensembl_gene_id: ACP_3214
symbol: ACP_3214
gene_biotype: protein_coding
description:
  Group II intron-encoded maturase; Identified by match to protein family HMM PF00078; match to protein family HMM PF08388.


ensembl_gene_id: ACP_3219
symbol: ACP_3219
gene_biotype: protein_coding
description:
  Conserved domain protein; Identified by similarity to GB:AAW76458.1; match to protein family HMM PF07715.


ensembl_gene_id: ACP_3235
symbol: ACP_3235
gene_biotype: protein_coding
description:
  ISAca2, transposase istB; Identified by similarity to SP:P15026; match to protein family HMM PF01695.


ensembl_gene_id: ACP_3252
symbol: ACP_3252
gene_biotype: protein_coding
description:
  Single-strand binding domain protein; Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621.


ensembl_gene_id: ACP_3265
symbol: ACP_3265
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to PIR:AC2550; match to protein family HMM PF06114.


ensembl_gene_id: ACP_3272
symbol: dapA2
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Identified by match to protein family HMM PF00701; Belongs to the DapA family.


ensembl_gene_id: ACP_3273
symbol: ACP_3273
gene_biotype: protein_coding
description:
  Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF01134; match to protein family HMM PF03486; match to protein family HMM PF04324; match to protein family HMM PF07992.


ensembl_gene_id: ACP_3275
symbol: ACP_3275
gene_biotype: protein_coding
description:
  Putative proline racemase; Identified by similarity to GB:CAB71312.1; match to protein family HMM PF05544; Belongs to the proline racemase family.


ensembl_gene_id: ACP_3277
symbol: ACP_3277
gene_biotype: protein_coding
description:
  Dipeptidyl peptidase, putative; Identified by similarity to GB:BAA11872.1; match to protein family HMM PF00326; match to protein family HMM PF00930.


ensembl_gene_id: ACP_3279
symbol: fucP
gene_biotype: protein_coding
description:
  Fucose: H+ symporter permease; Identified by similarity to SP:P11551; match to protein family HMM PF07690; match to protein family HMM TIGR00885.


ensembl_gene_id: ACP_3285
symbol: ACP_3285
gene_biotype: protein_coding
description:
  D-galactarate dehydratase/altronate hydrolase family protein, insertion; Identified by match to protein family HMM PF04295; match to protein family HMM PF08666.


ensembl_gene_id: ACP_3286
symbol: ACP_3286
gene_biotype: protein_coding
description:
  Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF08659.


ensembl_gene_id: ACP_3288
symbol: ACP_3288
gene_biotype: protein_coding
description:
  Putative sensory transcriptional regulator; Identified by match to protein family HMM PF01590; match to protein family HMM PF03861.


ensembl_gene_id: ACP_3291
symbol: ACP_3291
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:AAK23581.1; match to protein family HMM PF04169; match to protein family HMM PF04174.


ensembl_gene_id: ACP_3297
symbol: purH
gene_biotype: protein_coding
description:
  Bifunctional purine biosynthesis protein PurH; Identified by similarity to SP:P15639; match to protein family HMM PF01808; match to protein family HMM PF02142; match to protein family HMM TIGR00355.


ensembl_gene_id: ACP_3303
symbol: fabG
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: ACP_3306
symbol: ACP_3306
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: ACP_3307
symbol: recA
gene_biotype: protein_coding
description:
  recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: ACP_3308
symbol: coaD
gene_biotype: protein_coding
description:
  Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: ACP_3309
symbol: ACP_3309
gene_biotype: protein_coding
description:
  Aspartate aminotransferase; Identified by similarity to SP:P23034; match to protein family HMM PF00155; match to protein family HMM PF00266; match to protein family HMM PF01041; match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM PF01276.


ensembl_gene_id: ACP_3310
symbol: yfbT
gene_biotype: protein_coding
description:
  Phosphatase YfbT; Identified by similarity to SP:P77625; match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549.


ensembl_gene_id: ACP_3311
symbol: hppD
gene_biotype: protein_coding
description:
  4-hydroxyphenylpyruvate dioxygenase; Identified by match to protein family HMM PF00903; match to protein family HMM TIGR01263.


ensembl_gene_id: ACP_3313
symbol: folD
gene_biotype: protein_coding
description:
  Methylenetetrahydrofolate dehydrogenase (NADP+)/methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: ACP_3315
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: ACP_3316
symbol: crcB
gene_biotype: protein_coding
description:
  crcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: ACP_3317
symbol: ACP_3317
gene_biotype: protein_coding
description:
  Identified by match to protein family HMM PF00195; match to protein family HMM PF02797; match to protein family HMM PF08392; match to protein family HMM PF08541.


ensembl_gene_id: ACP_3318
symbol: phhA
gene_biotype: protein_coding
description:
  Phenylalanine-4-hydroxylase; Identified by similarity to SP:P30967; match to protein family HMM PF00351.


ensembl_gene_id: ACP_3321
symbol: ACP_3321
gene_biotype: protein_coding
description:
  Conserved domain protein; Identified by similarity to GB:BAD49603.1; match to protein family HMM PF08867.


ensembl_gene_id: ACP_3322
symbol: ACP_3322
gene_biotype: protein_coding
description:
  Putative para-nitrobenzyl esterase; Identified by similarity to SP:P37967; match to protein family HMM PF00135; Belongs to the type-B carboxylesterase/lipase family.


ensembl_gene_id: ACP_3325
symbol: rimP
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: ACP_3326
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription termination factor NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: ACP_3327
symbol: infB
gene_biotype: protein_coding
description:
  IF-2 family protein; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: ACP_3328
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: ACP_3329
symbol: shc
gene_biotype: protein_coding
description:
  Squalene-hopene cyclase; Identified by similarity to SP:P33247; similarity to GB:BAA25185.1; match to protein family HMM PF00432; match to protein family HMM TIGR01507; match to protein family HMM TIGR01787.


ensembl_gene_id: ACP_3330
symbol: ACP_3330
gene_biotype: protein_coding
description:
  Radical SAM domain protein; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR03470.


ensembl_gene_id: ACP_3334
symbol: hupA2
gene_biotype: protein_coding
description:
  DNA-binding protein HU 1; Identified by similarity to SP:P08821; match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family.


ensembl_gene_id: ACP_3336
symbol: ACP_3336
gene_biotype: protein_coding
description:
  Two-component system regulatory protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196.


ensembl_gene_id: ACP_3337
symbol: metH
gene_biotype: protein_coding
description:
  Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.


ensembl_gene_id: ACP_3338
symbol: cobA
gene_biotype: protein_coding
description:
  uroporphyrinogen-III C-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01469; Belongs to the precorrin methyltransferase family.


ensembl_gene_id: ACP_3340
symbol: ACP_3340
gene_biotype: protein_coding
description:
  Efflux transporter, RND family, MFP subunit; Identified by similarity to GB:BAC06607.1; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: ACP_3342
symbol: mdtC
gene_biotype: protein_coding
description:
  Multidrug resistance protein MdtC; Identified by similarity to GB:BAC06609.1; match to protein family HMM PF00873; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: ACP_3343
symbol: ACP_3343
gene_biotype: protein_coding
description:
  Efflux transporter, outer membrane factor lipoprotein, NodT family; Identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845.


ensembl_gene_id: ACP_3345
symbol: ACP_3345
gene_biotype: protein_coding
description:
  C-terminal processing peptidase; Identified by match to protein family HMM PF00595; match to protein family HMM PF03572.


ensembl_gene_id: ACP_3346
symbol: ACP_3346
gene_biotype: protein_coding
description:
  Penicillin-binding protein, 1A family; Identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074.


ensembl_gene_id: ACP_3352
symbol: ribF
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibF; Identified by match to protein family HMM PF01687; match to protein family HMM PF06574; match to protein family HMM TIGR00083; Belongs to the ribF family.


ensembl_gene_id: ACP_3355
symbol: ygfZ
gene_biotype: protein_coding
description:
  Folate-binding protein YgfZ; Identified by match to protein family HMM PF01571; match to protein family HMM PF08669; match to protein family HMM TIGR03317; Belongs to the GcvT family.


ensembl_gene_id: ACP_3357
symbol: mtaP
gene_biotype: protein_coding
description:
  Methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily.


ensembl_gene_id: ACP_3361
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: ACP_3363
symbol: mpl
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase; Identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01081.


ensembl_gene_id: ACP_3364
symbol: ACP_3364
gene_biotype: protein_coding
description:
  Identified by similarity to SP:O35083; similarity to SP:Q42670; match to protein family HMM PF01553.


ensembl_gene_id: ACP_3369
symbol: ACP_3369
gene_biotype: protein_coding
description:
  Conserved domain protein; Identified by similarity to GB:CAH04820.1; match to protein family HMM PF00515; match to protein family HMM PF07719.


ensembl_gene_id: ACP_3389
symbol: thrC2
gene_biotype: protein_coding
description:
  Threonine synthase; Identified by match to protein family HMM PF00291; match to protein family HMM TIGR00260.


ensembl_gene_id: ACP_3391
symbol: ACP_3391
gene_biotype: protein_coding
description:
  Aminotransferase, classes I and II family protein; Identified by match to protein family HMM PF00155; match to protein family HMM PF00266; match to protein family HMM PF01053; match to protein family HMM PF01212.


ensembl_gene_id: ACP_3392
symbol: ACP_3392
gene_biotype: protein_coding
description:
  Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase family protein; Identified by match to protein family HMM PF01553.


ensembl_gene_id: ACP_3395
symbol: dut
gene_biotype: protein_coding
description:
  dUTP diphosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.


ensembl_gene_id: ACP_3405
symbol: rimO
gene_biotype: protein_coding
description:
  RNA modification enzyme, MiaB-family; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: ACP_3406
symbol: ACP_3406
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C- terminal domain of GyrB, which probably disrupts DNA binding by the gyrase.


ensembl_gene_id: ACP_3409
symbol: ACP_3409
gene_biotype: protein_coding
description:
  CinA homolog; Identified by match to protein family HMM PF00994; match to protein family HMM PF02464; match to protein family HMM TIGR00199; match to protein family HMM TIGR00200; Belongs to the CinA family.


ensembl_gene_id: ACP_3410
symbol: plsY
gene_biotype: protein_coding
description:
  Acyl-phosphate glycerol 3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: ACP_3411
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase (NAD(+)); Identified by match to protein family HMM PF01210; match to protein family HMM PF02558; match to protein family HMM PF03446; match to protein family HMM PF07479; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: ACP_3413
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: ACP_3414
symbol: ribD
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: ACP_3415
symbol: ribE
gene_biotype: protein_coding
description:
  Riboflavin synthase, alpha subunit; Identified by match to protein family HMM PF00677; match to protein family HMM TIGR00187.


ensembl_gene_id: ACP_3416
symbol: ACP_3416
gene_biotype: protein_coding
description:
  Pyridoxal-phosphate dependent enzyme family protein; Identified by match to protein family HMM PF00291.


ensembl_gene_id: ACP_3417
symbol: mqnA
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: ACP_3418
symbol: dprA
gene_biotype: protein_coding
description:
  DNA protecting protein DprA; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.


ensembl_gene_id: ACP_3419
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...]


ensembl_gene_id: ACP_3420
symbol: ACP_3420
gene_biotype: protein_coding
description:
  Addiction module antitoxin, RelB/DinJ family; Identified by similarity to SP:Q47150; similarity to GB:CAA26250.1; match to protein family HMM PF04221; match to protein family HMM TIGR02384.


ensembl_gene_id: ACP_3421
symbol: ACP_3421
gene_biotype: protein_coding
description:
  Addiction module toxin, RelE/StbE family; Identified by match to protein family HMM PF05016; match to protein family HMM TIGR02385.


ensembl_gene_id: ACP_3423
symbol: ACP_3423
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to PIR:S77173; match to protein family HMM PF04248.


ensembl_gene_id: ACP_3425
symbol: ACP_3425
gene_biotype: protein_coding
description:
  Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00254.


ensembl_gene_id: ACP_3430
symbol: ACP_3430
gene_biotype: protein_coding
description:
  Xylann 1,4-beta-xylosidase; Identified by similarity to SP:P36906; match to protein family HMM PF01229.


ensembl_gene_id: ACP_3432
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: ACP_3433
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: ACP_3434
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: ACP_3438
symbol: cynT
gene_biotype: protein_coding
description:
  Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.


ensembl_gene_id: ACP_3442
symbol: arsC
gene_biotype: protein_coding
description:
  Arsenate reductase; Identified by similarity to SP:P45947; match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: ACP_3444
symbol: ACP_3444
gene_biotype: protein_coding
description:
  Putative dolichyl-phosphate-mannose-protein mannosyltransferase; Identified by match to protein family HMM PF02366.


ensembl_gene_id: ACP_3446
symbol: sixA
gene_biotype: protein_coding
description:
  Phosphohistidine phosphatase SixA; Identified by match to protein family HMM PF00300; match to protein family HMM TIGR00249.


ensembl_gene_id: ACP_3447
symbol: ACP_3447
gene_biotype: protein_coding
description:
  Putative exopolyphosphatase; Identified by match to protein family HMM PF02541; match to protein family HMM TIGR03706.


ensembl_gene_id: ACP_3449
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: ACP_3455
symbol: ACP_3455
gene_biotype: protein_coding
description:
  Decarboxylase, UbiD family; Identified by match to protein family HMM PF01977; match to protein family HMM TIGR00148; match to protein family HMM TIGR03701; Belongs to the UbiD family.


ensembl_gene_id: ACP_3456
symbol: nuoI-2
gene_biotype: protein_coding
description:
  NADH dehydrogenase I, I subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: ACP_3457
symbol: ACP_3457
gene_biotype: protein_coding
description:
  Conserved domain protein; Identified by similarity to PIR:C82791; match to protein family HMM PF04366.


ensembl_gene_id: ACP_3462
symbol: ACP_3462
gene_biotype: protein_coding
description:
  Sensory transduction histidine kinase; Identified by match to protein family HMM PF00027; match to protein family HMM PF02518.


ensembl_gene_id: ACP_3464
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: ACP_3465
symbol: ilvN
gene_biotype: protein_coding
description:
  Acetolactate synthase small subunit; Identified by match to protein family HMM PF01842; match to protein family HMM TIGR00119.


ensembl_gene_id: ACP_3466
symbol: ivlB2
gene_biotype: protein_coding
description:
  Acetolactate synthase, large subunit, biosynthetic type; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; match to protein family HMM TIGR00118.


ensembl_gene_id: ACP_3467
symbol: ilvD
gene_biotype: protein_coding
description:
  Dihydroxy-acid dehydratase; Identified by match to protein family HMM PF00920; match to protein family HMM TIGR00110; Belongs to the IlvD/Edd family.


ensembl_gene_id: ACP_3468
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: ACP_3469
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: ACP_3470
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: ACP_3471
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Identified by similarity to SP:Q8RL85; match to protein family HMM PF00682; Belongs to the alpha-IPM synthase/homocitrate synthase family.


ensembl_gene_id: ACP_3478
symbol: galE
gene_biotype: protein_coding
description:
  UDP-glucose 4-epimerase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01179; Belongs to the NAD(P)-dependent epimerase/dehydratase family.


ensembl_gene_id: ACP_3480
symbol: ACP_3480
gene_biotype: protein_coding
description:
  mutS domain protein; Identified by match to protein family HMM PF00488; Belongs to the DNA mismatch repair MutS family.


ensembl_gene_id: ACP_3481
symbol: rbsK
gene_biotype: protein_coding
description:
  Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.


ensembl_gene_id: ACP_3482
symbol: ACP_3482
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate.


ensembl_gene_id: ACP_3484
symbol: dnaE3
gene_biotype: protein_coding
description:
  DNA polymerase III, alpha subunit; Identified by similarity to SP:P10443; match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.


ensembl_gene_id: ACP_3487
symbol: ACP_3487
gene_biotype: protein_coding
description:
  Peptidase, family M1; Identified by match to protein family HMM PF00515; match to protein family HMM PF01433.


ensembl_gene_id: ACP_3488
symbol: lpxB
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: ACP_3491
symbol: ACP_3491
gene_biotype: protein_coding
description:
  Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: ACP_3493
symbol: adh
gene_biotype: protein_coding
description:
  Alcohol dehydrogenase, zinc-containing; Identified by similarity to SP:P42327; match to protein family HMM PF00107; match to protein family HMM PF08240.


ensembl_gene_id: ACP_3495
symbol: cusB2
gene_biotype: protein_coding
description:
  Heavy metal efflux RND transporter, MFP subunit CusB; Identified by similarity to SP:P77239; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: ACP_3505
symbol: ku
gene_biotype: protein_coding
description:
  Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.


ensembl_gene_id: ACP_3506
symbol: ACP_3506
gene_biotype: protein_coding
description:
  Putative DNA ligase, ATP-dependent; Identified by match to protein family HMM PF01068; match to protein family HMM PF01896; match to protein family HMM PF04679; match to protein family HMM TIGR02776; match to protein family HMM TIGR02777; match to protein family HMM TIGR02778; match to protein family HMM TIGR02779.


ensembl_gene_id: ACP_3518
symbol: ACP_3518
gene_biotype: protein_coding
description:
  Prolyl oligopeptidase; Identified by similarity to SP:P27028; similarity to SP:Q06903; match to protein family HMM PF00326; match to protein family HMM PF02897.


ensembl_gene_id: ACP_3519
symbol: ACP_3519
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family/aminotransferase, classes I and II; Identified by match to protein family HMM PF00155; match to protein family HMM PF00392.


ensembl_gene_id: ACP_3521
symbol: ACP_3521
gene_biotype: protein_coding
description:
  Transcription repressor of sporulation and degradative enzymes production paiB, putative; Identified by match to protein family HMM PF04299.


ensembl_gene_id: ACP_3522
symbol: ACP_3522
gene_biotype: protein_coding
description:
  TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715; match to protein family HMM TIGR01783.


ensembl_gene_id: ACP_3532
symbol: ACP_3532
gene_biotype: protein_coding
description:
  Aminotransferase, DegT/DnrJ/EryC1/StrS family; Identified by match to protein family HMM PF00202; match to protein family HMM PF01041; match to protein family HMM PF01053; match to protein family HMM PF01212; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: ACP_3537
symbol: ACP_3537
gene_biotype: protein_coding
description:
  Two-component sensor histidine kinase; Identified by match to protein family HMM PF01336; match to protein family HMM PF02518; match to protein family HMM PF07730.


ensembl_gene_id: ACP_3544
symbol: ACP_3544
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Identified by similarity to GB:CAI09968.1; match to protein family HMM PF08808.


ensembl_gene_id: ACP_3545
symbol: mobA
gene_biotype: protein_coding
description:
  Putative molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.


