# geneInfo

ensembl_gene_id: SAMN05660776_0012
symbol: SKB83305.1
gene_biotype: protein_coding
description:
  16S rRNA (cytosine967-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: SAMN05660776_0014
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.


ensembl_gene_id: SAMN05660776_0056
symbol: SKB83988.1
gene_biotype: protein_coding
description:
  4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05660776_0066
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: SAMN05660776_0067
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: SAMN05660776_0074
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: SAMN05660776_0089
symbol: SKB84958.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: SAMN05660776_0096
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: SAMN05660776_0110
symbol: SKB85394.1
gene_biotype: protein_coding
description:
  MFS transporter, sugar porter (SP) family; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: SAMN05660776_0119
symbol: pdxH
gene_biotype: protein_coding
description:
  Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).


ensembl_gene_id: SAMN05660776_0121
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: SAMN05660776_0124
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: SAMN05660776_0131
symbol: kdsB
gene_biotype: protein_coding
description:
  3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase); Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: SAMN05660776_0141
symbol: ribB
gene_biotype: protein_coding
description:
  3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.


ensembl_gene_id: SAMN05660776_0146
symbol: tpx
gene_biotype: protein_coding
description:
  Thiol peroxidase, atypical 2-Cys peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.


ensembl_gene_id: SAMN05660776_0158
symbol: SKB86543.1
gene_biotype: protein_coding
description:
  acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.


ensembl_gene_id: SAMN05660776_0176
symbol: SKB29905.1
gene_biotype: protein_coding
description:
  Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.


ensembl_gene_id: SAMN05660776_0177
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: SAMN05660776_0192
symbol: SKB30050.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: SAMN05660776_0205
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: SAMN05660776_0212
symbol: thiC
gene_biotype: protein_coding
description:
  Phosphomethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.


ensembl_gene_id: SAMN05660776_0215
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: SAMN05660776_0216
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: SAMN05660776_0223
symbol: SKB30393.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: SAMN05660776_0228
symbol: SKB30455.1
gene_biotype: protein_coding
description:
  Membrane fusion protein, cobalt-zinc-cadmium efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN05660776_0229
symbol: SKB30466.1
gene_biotype: protein_coding
description:
  Cobalt-zinc-cadmium resistance protein CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN05660776_0245
symbol: sbcD
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: SAMN05660776_0262
symbol: SKB30888.1
gene_biotype: protein_coding
description:
  propionyl-CoA carboxylase alpha chain; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: SAMN05660776_0277
symbol: SKB30971.1
gene_biotype: protein_coding
description:
  Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: SAMN05660776_0283
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: SAMN05660776_0291
symbol: SKB31129.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: SAMN05660776_0301
symbol: SKB31255.1
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: SAMN05660776_0304
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease-3; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: SAMN05660776_0313
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: SAMN05660776_0314
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.


ensembl_gene_id: SAMN05660776_0315
symbol: SKB31460.1
gene_biotype: protein_coding
description:
  acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: SAMN05660776_0316
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: SAMN05660776_0319
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: SAMN05660776_0320
symbol: SKB31527.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN05660776_0323
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily.


ensembl_gene_id: SAMN05660776_0324
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: SAMN05660776_0325
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: SAMN05660776_0326
symbol: hisB
gene_biotype: protein_coding
description:
  Imidazoleglycerol-phosphate dehydratase; In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family.


ensembl_gene_id: SAMN05660776_0327
symbol: hisH
gene_biotype: protein_coding
description:
  Glutamine amidotransferase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: SAMN05660776_0329
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.


ensembl_gene_id: SAMN05660776_0330
symbol: hisF
gene_biotype: protein_coding
description:
  Cyclase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: SAMN05660776_0334
symbol: SKB31753.1
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: SAMN05660776_0337
symbol: SKB31777.1
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen-3 oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: SAMN05660776_0347
symbol: nhaA
gene_biotype: protein_coding
description:
  Na+:H+ antiporter, NhaA family; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.


ensembl_gene_id: SAMN05660776_0348
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium transporter; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: SAMN05660776_0390
symbol: SKB32256.1
gene_biotype: protein_coding
description:
  Phosphopantetheine--protein transferase domain-containing protein; Belongs to the P-Pant transferase superfamily.


ensembl_gene_id: SAMN05660776_0391
symbol: acpP
gene_biotype: protein_coding
description:
  Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.


ensembl_gene_id: SAMN05660776_0392
symbol: SKB32341.1
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: SAMN05660776_0410
symbol: ung
gene_biotype: protein_coding
description:
  Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: SAMN05660776_0411
symbol: SKB32617.1
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity. Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: SAMN05660776_0413
symbol: SKB32633.1
gene_biotype: protein_coding
description:
  Na+/H+-dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: SAMN05660776_0414
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: SAMN05660776_0428
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: SAMN05660776_0430
symbol: tsaD
gene_biotype: protein_coding
description:
  N6-L-threonylcarbamoyladenine synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: SAMN05660776_0431
symbol: SKB32813.1
gene_biotype: protein_coding
description:
  16S rRNA (uracil1498-N3)-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: SAMN05660776_0455
symbol: SKB33045.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase-1; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: SAMN05660776_0472
symbol: SKB33205.1
gene_biotype: protein_coding
description:
  Alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.


ensembl_gene_id: SAMN05660776_0505
symbol: SKB33664.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxylase, type 1; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.


ensembl_gene_id: SAMN05660776_0510
symbol: mscL
gene_biotype: protein_coding
description:
  Large conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: SAMN05660776_0518
symbol: serC
gene_biotype: protein_coding
description:
  Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.


ensembl_gene_id: SAMN05660776_0519
symbol: SKB33791.1
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: SAMN05660776_0529
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: SAMN05660776_0531
symbol: lolD
gene_biotype: protein_coding
description:
  Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.


ensembl_gene_id: SAMN05660776_0542
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: SAMN05660776_0547
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: SAMN05660776_0555
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: SAMN05660776_0564
symbol: rpsR
gene_biotype: protein_coding
description:
  SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: SAMN05660776_0567
symbol: priA
gene_biotype: protein_coding
description:
  Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: SAMN05660776_0572
symbol: rlmH
gene_biotype: protein_coding
description:
  23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: SAMN05660776_0573
symbol: SKB34404.1
gene_biotype: protein_coding
description:
  XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: SAMN05660776_0577
symbol: trmH
gene_biotype: protein_coding
description:
  tRNA (guanosine-2'-O-)-methyltransferase; Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN05660776_0590
symbol: SKB34710.1
gene_biotype: protein_coding
description:
  Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: SAMN05660776_0604
symbol: rpmH
gene_biotype: protein_coding
description:
  LSU ribosomal protein L34P; Manually curated; Belongs to the bacterial ribosomal protein bL34 family.


ensembl_gene_id: SAMN05660776_0607
symbol: SKB34923.1
gene_biotype: protein_coding
description:
  Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.


ensembl_gene_id: SAMN05660776_0620
symbol: SKB35027.1
gene_biotype: protein_coding
description:
  Ornithine--oxo-acid transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05660776_0621
symbol: SKB35039.1
gene_biotype: protein_coding
description:
  23S rRNA (uracil1939-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: SAMN05660776_0663
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN05660776_0667
symbol: nnrD
gene_biotype: protein_coding
description:
  yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specif [...]


ensembl_gene_id: SAMN05660776_0673
symbol: SKB35692.1
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: SAMN05660776_0689
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: SAMN05660776_0695
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: SAMN05660776_0697
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: SAMN05660776_0699
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: SAMN05660776_0709
symbol: SKB36154.1
gene_biotype: protein_coding
description:
  phospholipid/cholesterol/gamma-HCH transport system permease protein; Manually curated; Belongs to the MlaE permease family.


ensembl_gene_id: SAMN05660776_0721
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: SAMN05660776_0722
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: SAMN05660776_0723
symbol: proA
gene_biotype: protein_coding
description:
  Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: SAMN05660776_0725
symbol: SKB36338.1
gene_biotype: protein_coding
description:
  Monovalent cation:H+ antiporter-2, CPA2 family; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: SAMN05660776_0730
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: SAMN05660776_0744
symbol: SKB36596.1
gene_biotype: protein_coding
description:
  NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.


ensembl_gene_id: SAMN05660776_0781
symbol: SKB37077.1
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-galactosamine dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: SAMN05660776_0785
symbol: SKB37138.1
gene_biotype: protein_coding
description:
  Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.


ensembl_gene_id: SAMN05660776_0787
symbol: cysQ
gene_biotype: protein_coding
description:
  3'(2'), 5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.


ensembl_gene_id: SAMN05660776_0788
symbol: SKB37222.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: SAMN05660776_0790
symbol: SKB37251.1
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: SAMN05660776_0818
symbol: menB
gene_biotype: protein_coding
description:
  1,4-Dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.


ensembl_gene_id: SAMN05660776_0822
symbol: menD
gene_biotype: protein_coding
description:
  2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily.


ensembl_gene_id: SAMN05660776_0834
symbol: panB
gene_biotype: protein_coding
description:
  Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: SAMN05660776_0838
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: SAMN05660776_0839
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: SAMN05660776_0840
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: SAMN05660776_0843
symbol: argB
gene_biotype: protein_coding
description:
  N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: SAMN05660776_0844
symbol: SKB38140.1
gene_biotype: protein_coding
description:
  N-succinyl-L-ornithine transcarbamylase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.


ensembl_gene_id: SAMN05660776_0845
symbol: SKB38159.1
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05660776_0847
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: SAMN05660776_0850
symbol: ilvA
gene_biotype: protein_coding
description:
  L-threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: SAMN05660776_0851
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: SAMN05660776_0862
symbol: SKB38378.1
gene_biotype: protein_coding
description:
  UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.


ensembl_gene_id: SAMN05660776_0867
symbol: SKB38467.1
gene_biotype: protein_coding
description:
  Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN05660776_0879
symbol: SKB38630.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: SAMN05660776_0887
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: SAMN05660776_0907
symbol: rlmF
gene_biotype: protein_coding
description:
  23S rRNA (adenine1618-N6)-methyltransferase; Specifically methylates the adenine in position 1618 of 23S rRNA.


ensembl_gene_id: SAMN05660776_0942
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: SAMN05660776_0944
symbol: SKB39624.1
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...]


ensembl_gene_id: SAMN05660776_0952
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: SAMN05660776_0965
symbol: SKB39869.1
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: SAMN05660776_0969
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: SAMN05660776_0981
symbol: SKB40175.1
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: SAMN05660776_0983
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: SAMN05660776_1004
symbol: sucC
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: SAMN05660776_1006
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: SAMN05660776_1016
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: SAMN05660776_1018
symbol: SKB40592.1
gene_biotype: protein_coding
description:
  Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.


ensembl_gene_id: SAMN05660776_1020
symbol: SKB40608.1
gene_biotype: protein_coding
description:
  DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA.


ensembl_gene_id: SAMN05660776_1022
symbol: SKB40626.1
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: SAMN05660776_1023
symbol: SKB40630.1
gene_biotype: protein_coding
description:
  RNA polymerase Rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: SAMN05660776_1025
symbol: dapA
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: SAMN05660776_1031
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: SAMN05660776_1035
symbol: prmC
gene_biotype: protein_coding
description:
  Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: SAMN05660776_1037
symbol: SKB40781.1
gene_biotype: protein_coding
description:
  Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: SAMN05660776_1042
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: SAMN05660776_1043
symbol: SKB40950.1
gene_biotype: protein_coding
description:
  Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: SAMN05660776_1046
symbol: mltG
gene_biotype: protein_coding
description:
  UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: SAMN05660776_1048
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: SAMN05660776_1052
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine37-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: SAMN05660776_1053
symbol: rplS
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: SAMN05660776_1068
symbol: lipB
gene_biotype: protein_coding
description:
  Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: SAMN05660776_1079
symbol: SKB44887.1
gene_biotype: protein_coding
description:
  Membrane fusion protein, Cu(I)/Ag(I) efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN05660776_1081
symbol: SKB44924.1
gene_biotype: protein_coding
description:
  Cu(I)/Ag(I) efflux system membrane protein CusA/SilA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN05660776_1094
symbol: surE
gene_biotype: protein_coding
description:
  5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: SAMN05660776_1096
symbol: SKB45163.1
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: SAMN05660776_1110
symbol: coaX
gene_biotype: protein_coding
description:
  Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: SAMN05660776_1115
symbol: SKB45467.1
gene_biotype: protein_coding
description:
  Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN05660776_1116
symbol: SKB45477.1
gene_biotype: protein_coding
description:
  RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN05660776_1125
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase-1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: SAMN05660776_1127
symbol: miaB
gene_biotype: protein_coding
description:
  tRNA-2-methylthio-N6-dimethylallyladenosine synthase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: SAMN05660776_1131
symbol: SKB45659.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: SAMN05660776_1132
symbol: groS
gene_biotype: protein_coding
description:
  Chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: SAMN05660776_1133
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: SAMN05660776_1134
symbol: cutC
gene_biotype: protein_coding
description:
  Copper homeostasis protein; Participates in the control of copper homeostasis. Belongs to the CutC family.


ensembl_gene_id: SAMN05660776_1150
symbol: SKB46030.1
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase/carboxymuconolactone decarboxylase family protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: SAMN05660776_1153
symbol: SKB46095.1
gene_biotype: protein_coding
description:
  Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: SAMN05660776_1178
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: SAMN05660776_1179
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease, protease subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: SAMN05660776_1185
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxine 5-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: SAMN05660776_1187
symbol: nadK
gene_biotype: protein_coding
description:
  NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: SAMN05660776_1189
symbol: SKB46537.1
gene_biotype: protein_coding
description:
  Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: SAMN05660776_1214
symbol: ctaB
gene_biotype: protein_coding
description:
  Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.


ensembl_gene_id: SAMN05660776_1218
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: SAMN05660776_1220
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: SAMN05660776_1222
symbol: queG
gene_biotype: protein_coding
description:
  Epoxyqueuosine reductase; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family.


ensembl_gene_id: SAMN05660776_1226
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: SAMN05660776_1236
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: SAMN05660776_1238
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: SAMN05660776_1245
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: SAMN05660776_1246
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine55 synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: SAMN05660776_1249
symbol: aat
gene_biotype: protein_coding
description:
  leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: SAMN05660776_1255
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: SAMN05660776_1267
symbol: SKB47569.1
gene_biotype: protein_coding
description:
  Putative glycerol-1-phosphate prenyltransferase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P).


ensembl_gene_id: SAMN05660776_1268
symbol: SKB47586.1
gene_biotype: protein_coding
description:
  4'-phosphopantetheinyl transferase superfamily protein; Belongs to the P-Pant transferase superfamily.


ensembl_gene_id: SAMN05660776_1269
symbol: ahcY
gene_biotype: protein_coding
description:
  Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: SAMN05660776_1272
symbol: rplU
gene_biotype: protein_coding
description:
  LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: SAMN05660776_1280
symbol: SKB47794.1
gene_biotype: protein_coding
description:
  Single-strand DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: SAMN05660776_1288
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: SAMN05660776_1290
symbol: SKB47933.1
gene_biotype: protein_coding
description:
  Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05660776_1291
symbol: bioD
gene_biotype: protein_coding
description:
  Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: SAMN05660776_1305
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: SAMN05660776_1306
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: SAMN05660776_1309
symbol: panC
gene_biotype: protein_coding
description:
  Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: SAMN05660776_1310
symbol: panD
gene_biotype: protein_coding
description:
  L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: SAMN05660776_1313
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA/Sms; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: SAMN05660776_1323
symbol: glyQS
gene_biotype: protein_coding
description:
  glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: SAMN05660776_1345
symbol: rsmA
gene_biotype: protein_coding
description:
  16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: SAMN05660776_1351
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase, PTH1 family; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: SAMN05660776_1352
symbol: rplY
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: SAMN05660776_1368
symbol: metE
gene_biotype: protein_coding
description:
  Methionine synthase (B12-independent); Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.


ensembl_gene_id: SAMN05660776_1370
symbol: nrfA
gene_biotype: protein_coding
description:
  Nitrite reductase (cytochrome c-552); Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process; Belongs to the cytochrome c-552 family.


ensembl_gene_id: SAMN05660776_1388
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: SAMN05660776_1390
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN05660776_1402
symbol: SKB49587.1
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: SAMN05660776_1424
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: SAMN05660776_1427
symbol: SKB49928.1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN05660776_1430
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: SAMN05660776_1450
symbol: nbaC
gene_biotype: protein_coding
description:
  3-hydroxyanthranilate 3,4-dioxygenase; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate; Belongs to the 3-HAO family.


ensembl_gene_id: SAMN05660776_1454
symbol: SKB50214.1
gene_biotype: protein_coding
description:
  Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN05660776_1455
symbol: SKB50227.1
gene_biotype: protein_coding
description:
  Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN05660776_1466
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease-3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: SAMN05660776_1467
symbol: SKB50385.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: SAMN05660776_1469
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase-1; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: SAMN05660776_1473
symbol: SKB50443.1
gene_biotype: protein_coding
description:
  Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: SAMN05660776_1475
symbol: kbl
gene_biotype: protein_coding
description:
  2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.


ensembl_gene_id: SAMN05660776_1490
symbol: ade
gene_biotype: protein_coding
description:
  Adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.


ensembl_gene_id: SAMN05660776_1492
symbol: rsmI
gene_biotype: protein_coding
description:
  16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: SAMN05660776_1495
symbol: SKB50714.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: SAMN05660776_1497
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: SAMN05660776_1508
symbol: SKB50918.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.


ensembl_gene_id: SAMN05660776_1509
symbol: SKB50933.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: SAMN05660776_1513
symbol: tatA
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: SAMN05660776_1521
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: SAMN05660776_1522
symbol: ybeY
gene_biotype: protein_coding
description:
  rRNA maturation RNase YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: SAMN05660776_1524
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: SAMN05660776_1531
symbol: SKB51230.1
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: SAMN05660776_1535
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: SAMN05660776_1540
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: SAMN05660776_1544
symbol: SKB51408.1
gene_biotype: protein_coding
description:
  Kef-type K+ transport system, membrane component KefB; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: SAMN05660776_1548
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: SAMN05660776_1551
symbol: murQ
gene_biotype: protein_coding
description:
  N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.


ensembl_gene_id: SAMN05660776_1565
symbol: SKB51712.1
gene_biotype: protein_coding
description:
  tRNA-U20-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: SAMN05660776_1567
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: SAMN05660776_1582
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.


ensembl_gene_id: SAMN05660776_1596
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase-3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: SAMN05660776_1597
symbol: SKB52081.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: SAMN05660776_1598
symbol: SKB52093.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: SAMN05660776_1600
symbol: mtgA
gene_biotype: protein_coding
description:
  Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.


ensembl_gene_id: SAMN05660776_1609
symbol: atpB
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: SAMN05660776_1610
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN05660776_1611
symbol: atpF
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: SAMN05660776_1612
symbol: atpH
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN05660776_1613
symbol: atpA
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: SAMN05660776_1614
symbol: atpG
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: SAMN05660776_1617
symbol: dut
gene_biotype: protein_coding
description:
  dUTP pyrophosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: SAMN05660776_1630
symbol: recA
gene_biotype: protein_coding
description:
  Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: SAMN05660776_1641
symbol: SKB52584.1
gene_biotype: protein_coding
description:
  methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: SAMN05660776_1648
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: SAMN05660776_1650
symbol: SKB52661.1
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: SAMN05660776_1651
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: SAMN05660776_1654
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: SAMN05660776_1676
symbol: SKB52942.1
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: SAMN05660776_1684
symbol: SKB52996.1
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: SAMN05660776_1690
symbol: ileS
gene_biotype: protein_coding
description:
  Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.


ensembl_gene_id: SAMN05660776_1692
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: SAMN05660776_1699
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: SAMN05660776_1717
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: SAMN05660776_1723
symbol: SKB53344.1
gene_biotype: protein_coding
description:
  Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.


ensembl_gene_id: SAMN05660776_1729
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: SAMN05660776_1739
symbol: SKB53497.1
gene_biotype: protein_coding
description:
  Succinate dehydrogenase / fumarate reductase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.


ensembl_gene_id: SAMN05660776_1746
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor (superfamily II helicase); Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN05660776_1757
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: SAMN05660776_1771
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: SAMN05660776_1780
symbol: SKB54084.1
gene_biotype: protein_coding
description:
  2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: SAMN05660776_1797
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: SAMN05660776_1812
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: SAMN05660776_1820
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N7-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: SAMN05660776_1823
symbol: SKB54649.1
gene_biotype: protein_coding
description:
  ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: SAMN05660776_1830
symbol: SKB54732.1
gene_biotype: protein_coding
description:
  tRNA1Val (adenine37-N6)-methyltransferase; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC).


ensembl_gene_id: SAMN05660776_1831
symbol: tsf
gene_biotype: protein_coding
description:
  Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: SAMN05660776_1834
symbol: rplM
gene_biotype: protein_coding
description:
  LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: SAMN05660776_1836
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: SAMN05660776_1861
symbol: SKB55175.1
gene_biotype: protein_coding
description:
  Cell division transport system permease protein; Required for cell division and gliding motility. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: SAMN05660776_1864
symbol: glgB
gene_biotype: protein_coding
description:
  1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: SAMN05660776_1871
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: SAMN05660776_1889
symbol: SKB58185.1
gene_biotype: protein_coding
description:
  BCCT, betaine/carnitine/choline family transporter; Belongs to the BCCT transporter (TC 2.A.15) family.


ensembl_gene_id: SAMN05660776_1895
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: SAMN05660776_1897
symbol: folD
gene_biotype: protein_coding
description:
  5,10-methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: SAMN05660776_1905
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family.


ensembl_gene_id: SAMN05660776_1907
symbol: SKB58449.1
gene_biotype: protein_coding
description:
  NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.


ensembl_gene_id: SAMN05660776_1911
symbol: engB
gene_biotype: protein_coding
description:
  GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: SAMN05660776_1914
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA (cytosine1402-N4)-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: SAMN05660776_1917
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: SAMN05660776_1918
symbol: mraY
gene_biotype: protein_coding
description:
  Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: SAMN05660776_1919
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: SAMN05660776_1921
symbol: murG
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: SAMN05660776_1924
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: SAMN05660776_1925
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: SAMN05660776_1931
symbol: SKB58746.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4).


ensembl_gene_id: SAMN05660776_1936
symbol: queE
gene_biotype: protein_coding
description:
  Organic radical activating enzyme; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: SAMN05660776_1938
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN05660776_1940
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.


ensembl_gene_id: SAMN05660776_1941
symbol: secF
gene_biotype: protein_coding
description:
  SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.


ensembl_gene_id: SAMN05660776_1945
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: SAMN05660776_1946
symbol: SKB58994.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: SAMN05660776_1953
symbol: SKB59207.1
gene_biotype: protein_coding
description:
  anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.


ensembl_gene_id: SAMN05660776_1954
symbol: SKB59218.1
gene_biotype: protein_coding
description:
  Glutamate dehydrogenase/leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: SAMN05660776_1967
symbol: SKB59403.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: SAMN05660776_1979
symbol: ruvC
gene_biotype: protein_coding
description:
  Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: SAMN05660776_1980
symbol: SKB59628.1
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen-3 oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: SAMN05660776_1992
symbol: macB
gene_biotype: protein_coding
description:
  Putative ABC transport system ATP-binding protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.


ensembl_gene_id: SAMN05660776_2004
symbol: gmd
gene_biotype: protein_coding
description:
  GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.


ensembl_gene_id: SAMN05660776_2025
symbol: SKB60246.1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: SAMN05660776_2046
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: SAMN05660776_2047
symbol: SKB60521.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol---serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN05660776_2049
symbol: SKB60536.1
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase AhpD family core domain-containing protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: SAMN05660776_2050
symbol: tatC
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.


ensembl_gene_id: SAMN05660776_2071
symbol: xerC
gene_biotype: protein_coding
description:
  Integrase/recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: SAMN05660776_2077
symbol: tuf
gene_biotype: protein_coding
description:
  Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: SAMN05660776_2079
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: SAMN05660776_2080
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: SAMN05660776_2081
symbol: rplK
gene_biotype: protein_coding
description:
  LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: SAMN05660776_2082
symbol: rplA
gene_biotype: protein_coding
description:
  LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: SAMN05660776_2083
symbol: rplJ
gene_biotype: protein_coding
description:
  LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: SAMN05660776_2084
symbol: rplL
gene_biotype: protein_coding
description:
  LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: SAMN05660776_2085
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN05660776_2090
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: SAMN05660776_2118
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: SAMN05660776_2120
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN05660776_2129
symbol: SKB61697.1
gene_biotype: protein_coding
description:
  tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family; Belongs to the SUA5 family.


ensembl_gene_id: SAMN05660776_2135
symbol: menA
gene_biotype: protein_coding
description:
  1,4-dihydroxy-2-naphthoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.


ensembl_gene_id: SAMN05660776_2155
symbol: fcl
gene_biotype: protein_coding
description:
  GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.


ensembl_gene_id: SAMN05660776_2166
symbol: SKB62142.1
gene_biotype: protein_coding
description:
  N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase; Belongs to the glycosyltransferase 26 family.


ensembl_gene_id: SAMN05660776_2171
symbol: katG
gene_biotype: protein_coding
description:
  Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.


ensembl_gene_id: SAMN05660776_2198
symbol: SKB62476.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains.


ensembl_gene_id: SAMN05660776_2206
symbol: SKB62545.1
gene_biotype: protein_coding
description:
  Choline/glycine/proline betaine transport protein; Belongs to the BCCT transporter (TC 2.A.15) family.


ensembl_gene_id: SAMN05660776_2228
symbol: SKB62879.1
gene_biotype: protein_coding
description:
  NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: SAMN05660776_2232
symbol: pepT
gene_biotype: protein_coding
description:
  Tripeptide aminopeptidase; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.


ensembl_gene_id: SAMN05660776_2234
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: SAMN05660776_2245
symbol: guaB
gene_biotype: protein_coding
description:
  IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: SAMN05660776_2263
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: SAMN05660776_2271
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: SAMN05660776_2273
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: SAMN05660776_2274
symbol: SKB63382.1
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: SAMN05660776_2277
symbol: rplT
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: SAMN05660776_2280
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: SAMN05660776_2292
symbol: SKB65213.1
gene_biotype: protein_coding
description:
  Pyruvate formate lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.


ensembl_gene_id: SAMN05660776_2322
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: SAMN05660776_2327
symbol: purU
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).


ensembl_gene_id: SAMN05660776_2328
symbol: icmF
gene_biotype: protein_coding
description:
  methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.


ensembl_gene_id: SAMN05660776_2338
symbol: crcB
gene_biotype: protein_coding
description:
  CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: SAMN05660776_2342
symbol: SKB66083.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05660776_2347
symbol: grpE
gene_biotype: protein_coding
description:
  Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...]


ensembl_gene_id: SAMN05660776_2348
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: SAMN05660776_2367
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.


ensembl_gene_id: SAMN05660776_2374
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).


ensembl_gene_id: SAMN05660776_2389
symbol: kynU
gene_biotype: protein_coding
description:
  Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.


ensembl_gene_id: SAMN05660776_2395
symbol: SKB66718.1
gene_biotype: protein_coding
description:
  Deoxyribodipyrimidine photo-lyase (single-stranded DNA-specific); Belongs to the DNA photolyase family.


ensembl_gene_id: SAMN05660776_2400
symbol: kmo
gene_biotype: protein_coding
description:
  Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily.


ensembl_gene_id: SAMN05660776_2406
symbol: SKB66798.1
gene_biotype: protein_coding
description:
  Dinuclear metal center protein, YbgI/SA1388 family; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.


ensembl_gene_id: SAMN05660776_2407
symbol: lpxK
gene_biotype: protein_coding
description:
  lipid-A-disaccharide kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: SAMN05660776_2410
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: SAMN05660776_2418
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: SAMN05660776_2423
symbol: ftsH
gene_biotype: protein_coding
description:
  Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: SAMN05660776_2424
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: SAMN05660776_2425
symbol: SKB66959.1
gene_biotype: protein_coding
description:
  BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase.


ensembl_gene_id: SAMN05660776_2427
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: SAMN05660776_2433
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: SAMN05660776_2436
symbol: SKB67074.1
gene_biotype: protein_coding
description:
  23S rRNA pseudouridine1911/1915/1917 synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: SAMN05660776_2449
symbol: SKB67168.1
gene_biotype: protein_coding
description:
  Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.


ensembl_gene_id: SAMN05660776_2453
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: SAMN05660776_2454
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: SAMN05660776_2457
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: SAMN05660776_2469
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: SAMN05660776_2475
symbol: ctaA
gene_biotype: protein_coding
description:
  Cytochrome c oxidase assembly protein subunit 15; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily.


ensembl_gene_id: SAMN05660776_2476
symbol: SKB67487.1
gene_biotype: protein_coding
description:
  tRNA nucleotidyltransferase (CCA-adding enzyme); Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: SAMN05660776_2484
symbol: SKB67570.1
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family.


ensembl_gene_id: SAMN05660776_2485
symbol: SKB67574.1
gene_biotype: protein_coding
description:
  Putative holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: SAMN05660776_2487
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: SAMN05660776_2491
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: SAMN05660776_2499
symbol: clpB
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: SAMN05660776_2503
symbol: glyA
gene_biotype: protein_coding
description:
  Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: SAMN05660776_2509
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: SAMN05660776_2517
symbol: recR
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: SAMN05660776_2529
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: SAMN05660776_2543
symbol: ureE
gene_biotype: protein_coding
description:
  Urease accessory protein; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.


ensembl_gene_id: SAMN05660776_2544
symbol: ureF
gene_biotype: protein_coding
description:
  Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.


ensembl_gene_id: SAMN05660776_2545
symbol: ureG
gene_biotype: protein_coding
description:
  Urease accessory protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.


ensembl_gene_id: SAMN05660776_2559
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: SAMN05660776_2573
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA-specific 2-thiouridylase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: SAMN05660776_2659
symbol: SKB71494.1
gene_biotype: protein_coding
description:
  5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.


ensembl_gene_id: SAMN05660776_2698
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: SAMN05660776_2701
symbol: SKB72035.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: SAMN05660776_2705
symbol: pcm
gene_biotype: protein_coding
description:
  protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.


ensembl_gene_id: SAMN05660776_2706
symbol: yidC
gene_biotype: protein_coding
description:
  YidC/Oxa1 family membrane protein insertase; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: SAMN05660776_2707
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: SAMN05660776_2720
symbol: rsmG
gene_biotype: protein_coding
description:
  16S rRNA (guanine527-N7)-methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: SAMN05660776_2725
symbol: menG
gene_biotype: protein_coding
description:
  Demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).


ensembl_gene_id: SAMN05660776_2729
symbol: SKB73795.1
gene_biotype: protein_coding
description:
  Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.


ensembl_gene_id: SAMN05660776_2730
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: SAMN05660776_2731
symbol: rpsO
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: SAMN05660776_2732
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: SAMN05660776_2734
symbol: SKB73881.1
gene_biotype: protein_coding
description:
  RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN05660776_2745
symbol: SKB74048.1
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase.


ensembl_gene_id: SAMN05660776_2775
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA (adenine2503-C2)-methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: SAMN05660776_2776
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine--tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: SAMN05660776_2777
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: SAMN05660776_2780
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: SAMN05660776_2781
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: SAMN05660776_2789
symbol: SKB74784.1
gene_biotype: protein_coding
description:
  5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: SAMN05660776_2790
symbol: SKB74817.1
gene_biotype: protein_coding
description:
  5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.


ensembl_gene_id: SAMN05660776_2801
symbol: metZ
gene_biotype: protein_coding
description:
  O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.


ensembl_gene_id: SAMN05660776_2805
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: SAMN05660776_2823
symbol: ku
gene_biotype: protein_coding
description:
  DNA end-binding protein Ku; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.


ensembl_gene_id: SAMN05660776_2826
symbol: hppA
gene_biotype: protein_coding
description:
  K(+)-stimulated pyrophosphate-energized sodium pump; Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily.


ensembl_gene_id: SAMN05660776_2827
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: SAMN05660776_2829
symbol: SKB75278.1
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.


ensembl_gene_id: SAMN05660776_2834
symbol: thyA
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: SAMN05660776_2841
symbol: SKB75421.1
gene_biotype: protein_coding
description:
  Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.


ensembl_gene_id: SAMN05660776_2847
symbol: SKB75497.1
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: SAMN05660776_2870
symbol: cas1
gene_biotype: protein_coding
description:
  CRISP-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: SAMN05660776_2871
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: SAMN05660776_2890
symbol: SKB76921.1
gene_biotype: protein_coding
description:
  Type I restriction enzyme, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.


ensembl_gene_id: SAMN05660776_2939
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: SAMN05660776_2942
symbol: SKB77579.1
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN05660776_2943
symbol: pdhA
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: SAMN05660776_2944
symbol: SKB77602.1
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: SAMN05660776_2957
symbol: gcvP
gene_biotype: protein_coding
description:
  Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.


ensembl_gene_id: SAMN05660776_2962
symbol: purE
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: SAMN05660776_2963
symbol: purK
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: SAMN05660776_2964
symbol: SKB77921.1
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: SAMN05660776_2965
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: SAMN05660776_2966
symbol: obg
gene_biotype: protein_coding
description:
  GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: SAMN05660776_2981
symbol: SKB78164.1
gene_biotype: protein_coding
description:
  23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN05660776_2987
symbol: rpsL
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: SAMN05660776_2988
symbol: rpsG
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: SAMN05660776_2989
symbol: fusA
gene_biotype: protein_coding
description:
  Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: SAMN05660776_2990
symbol: rpsJ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: SAMN05660776_2991
symbol: rplC
gene_biotype: protein_coding
description:
  LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: SAMN05660776_2993
symbol: rplW
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: SAMN05660776_2994
symbol: rplB
gene_biotype: protein_coding
description:
  LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: SAMN05660776_2995
symbol: rpsS
gene_biotype: protein_coding
description:
  SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: SAMN05660776_2996
symbol: rplV
gene_biotype: protein_coding
description:
  LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: SAMN05660776_2997
symbol: rpsC
gene_biotype: protein_coding
description:
  SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: SAMN05660776_2998
symbol: rplP
gene_biotype: protein_coding
description:
  LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: SAMN05660776_3000
symbol: rpsQ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: SAMN05660776_3001
symbol: rplN
gene_biotype: protein_coding
description:
  LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: SAMN05660776_3002
symbol: rplX
gene_biotype: protein_coding
description:
  LSU ribosomal protein L24P; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: SAMN05660776_3003
symbol: rplE
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: SAMN05660776_3004
symbol: rpsN
gene_biotype: protein_coding
description:
  SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.


ensembl_gene_id: SAMN05660776_3005
symbol: rpsH
gene_biotype: protein_coding
description:
  SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: SAMN05660776_3006
symbol: rplF
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: SAMN05660776_3007
symbol: rplR
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: SAMN05660776_3008
symbol: rpsE
gene_biotype: protein_coding
description:
  SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: SAMN05660776_3010
symbol: rplO
gene_biotype: protein_coding
description:
  LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: SAMN05660776_3011
symbol: secY
gene_biotype: protein_coding
description:
  Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: SAMN05660776_3012
symbol: infA
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 1 (bIF-1); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: SAMN05660776_3013
symbol: rpmJ
gene_biotype: protein_coding
description:
  LSU ribosomal protein L36P; Manually curated; Belongs to the bacterial ribosomal protein bL36 family.


ensembl_gene_id: SAMN05660776_3014
symbol: rpsM
gene_biotype: protein_coding
description:
  SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: SAMN05660776_3015
symbol: rpsK
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: SAMN05660776_3016
symbol: rpsD
gene_biotype: protein_coding
description:
  SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: SAMN05660776_3017
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN05660776_3021
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: SAMN05660776_3035
symbol: nqrA
gene_biotype: protein_coding
description:
  Na+-transporting NADH:ubiquinone oxidoreductase subunit A; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.


ensembl_gene_id: SAMN05660776_3036
symbol: nqrB
gene_biotype: protein_coding
description:
  Na+-transporting NADH:ubiquinone oxidoreductase subunit B; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.


ensembl_gene_id: SAMN05660776_3037
symbol: nqrC
gene_biotype: protein_coding
description:
  Na+-transporting NADH:ubiquinone oxidoreductase subunit C; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.


ensembl_gene_id: SAMN05660776_3038
symbol: nqrD
gene_biotype: protein_coding
description:
  Na+-transporting NADH:ubiquinone oxidoreductase subunit D; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family.


ensembl_gene_id: SAMN05660776_3039
symbol: nqrE
gene_biotype: protein_coding
description:
  Na+-transporting NADH:ubiquinone oxidoreductase subunit E; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family.


ensembl_gene_id: SAMN05660776_3040
symbol: nqrF
gene_biotype: protein_coding
description:
  Na+-transporting NADH:ubiquinone oxidoreductase subunit F; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway.


ensembl_gene_id: SAMN05660776_3045
symbol: map
gene_biotype: protein_coding
description:
  Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: SAMN05660776_3048
symbol: gpmI
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: SAMN05660776_3054
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: SAMN05660776_3057
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: SAMN05660776_3059
symbol: dacA
gene_biotype: protein_coding
description:
  TIGR00159 family protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: SAMN05660776_3063
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: SAMN05660776_3099
symbol: SKB80706.1
gene_biotype: protein_coding
description:
  Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.


ensembl_gene_id: SAMN05660776_3119
symbol: rnz
gene_biotype: protein_coding
description:
  Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.


ensembl_gene_id: SAMN05660776_3121
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: SAMN05660776_3130
symbol: ychF
gene_biotype: protein_coding
description:
  Hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: SAMN05660776_3136
symbol: SKB81761.1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: SAMN05660776_3145
symbol: SKB81837.1
gene_biotype: protein_coding
description:
  LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: SAMN05660776_3160
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: SAMN05660776_3173
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: SAMN05660776_3176
symbol: xerC-2
gene_biotype: protein_coding
description:
  Integrase/recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


# pathwayInfo

id: CL:1022
description: Glutamate biosynthetic process, and Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1022_Glutamate_biosynthetic_process,_and_Glu/Leu/Phe/Val_dehydrogenase,_dimerisation_domain


id: CL:1042
description: Methylmalonyl-CoA mutase, and Acetate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1042_Methylmalonyl-CoA_mutase,_and_Acetate_metabolic_process


id: CL:1056
description: Mixed, incl. Fatty acid degradation, and Synthesis and degradation of ketone bodies
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1056_Mixed,_incl._Fatty_acid_degradation,_and_Synthesis_and_degradation_of_ketone_bodies


id: CL:1058
description: Acyl-CoA dehydrogenase, middle domain, and Lipid oxidation
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1058_Acyl-CoA_dehydrogenase,_middle_domain,_and_Lipid_oxidation


id: CL:1061
description: Thiolase, and 3-hydroxyacyl-CoA dehydrogenase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1061_Thiolase,_and_3-hydroxyacyl-CoA_dehydrogenase,_C-terminal


id: CL:1089
description: acetyl-CoA biosynthetic process, and Alcohol dehydrogenase-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1089_acetyl-CoA_biosynthetic_process,_and_Alcohol_dehydrogenase-like,_N-terminal


id: CL:110
description: Mixed, incl. Translation protein SH3-like domain superfamily, and Small ribosomal subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:110_Mixed,_incl._Translation_protein_SH3-like_domain_superfamily,_and_Small_ribosomal_subunit


id: CL:1113
description: Mixed, incl. Fatty acid biosynthesis, and FAD-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1113_Mixed,_incl._Fatty_acid_biosynthesis,_and_FAD-binding_domain


id: CL:1114
description: Fatty acid biosynthesis, and FAD-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1114_Fatty_acid_biosynthesis,_and_FAD-binding_domain


id: CL:1115
description: Fatty acid biosynthesis, and Biotin-binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1115_Fatty_acid_biosynthesis,_and_Biotin-binding_site


id: CL:1116
description: Fatty acid biosynthesis, and Biotin-binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1116_Fatty_acid_biosynthesis,_and_Biotin-binding_site


id: CL:1117
description: Fatty acid biosynthesis, and S-acyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1117_Fatty_acid_biosynthesis,_and_S-acyltransferase_activity


id: CL:1120
description: Beta-ketoacyl-acyl-carrier-protein synthase III activity, and S-acyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1120_Beta-ketoacyl-acyl-carrier-protein_synthase_III_activity,_and_S-acyltransferase_activity


id: CL:1140
description: Biotin-binding site, and Acetyl-CoA carboxylase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1140_Biotin-binding_site,_and_Acetyl-CoA_carboxylase


id: CL:1151
description: Fatty acid biosynthetic process, and HI0933-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1151_Fatty_acid_biosynthetic_process,_and_HI0933-like_protein


id: CL:1152
description: Fatty acid synthase activity, and Nitronate monooxygenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1152_Fatty_acid_synthase_activity,_and_Nitronate_monooxygenase_activity


id: CL:1161
description: Mixed, incl. HI0933-like protein, and Acyl carrier protein (ACP)
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1161_Mixed,_incl._HI0933-like_protein,_and_Acyl_carrier_protein_(ACP)


id: CL:1171
description: Mixed, incl. Biotin metabolism, and Peptidase C45
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1171_Mixed,_incl._Biotin_metabolism,_and_Peptidase_C45


id: CL:1173
description: Biotin metabolism, and Phosphopantetheine attachment site
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1173_Biotin_metabolism,_and_Phosphopantetheine_attachment_site


id: CL:1177
description: Beta-ketoacyl synthase, N-terminal, and Phosphopantetheine attachment site
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1177_Beta-ketoacyl_synthase,_N-terminal,_and_Phosphopantetheine_attachment_site


id: CL:1215
description: Pentose phosphate pathway, and Glycolysis / Gluconeogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1215_Pentose_phosphate_pathway,_and_Glycolysis_/_Gluconeogenesis


id: CL:1216
description: Pentose phosphate pathway, and Glyceraldehyde/Erythrose phosphate dehydrogenase family
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1216_Pentose_phosphate_pathway,_and_Glyceraldehyde/Erythrose_phosphate_dehydrogenase_family


id: CL:1218
description: Glycolysis, and Pentose phosphate pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1218_Glycolysis,_and_Pentose_phosphate_pathway


id: CL:1220
description: Glycolysis, and Glyceraldehyde/Erythrose phosphate dehydrogenase family
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1220_Glycolysis,_and_Glyceraldehyde/Erythrose_phosphate_dehydrogenase_family


id: CL:1222
description: Glyceraldehyde 3-phosphate dehydrogenase, active site, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1222_Glyceraldehyde_3-phosphate_dehydrogenase,_active_site,_and_Glycolysis


id: CL:1232
description: Pyruvate kinase-like domain superfamily, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1232_Pyruvate_kinase-like_domain_superfamily,_and_Glycolysis


id: CL:125
description: rRNA-binding, and Elongation factor G C-terminus
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:125_rRNA-binding,_and_Elongation_factor_G_C-terminus


id: CL:1263
description: pfkB family carbohydrate kinase, and Amidohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1263_pfkB_family_carbohydrate_kinase,_and_Amidohydrolase


id: CL:1275
description: Mixed, incl. Intramolecular oxidoreductase activity, interconverting aldoses and ketoses, and Ami_2
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1275_Mixed,_incl._Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses,_and_Ami_2


id: CL:1295
description: Cellular amino acid biosynthetic process, and Cysteine and methionine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1295_Cellular_amino_acid_biosynthetic_process,_and_Cysteine_and_methionine_metabolism


id: CL:1296
description: Cellular amino acid biosynthetic process, and Cysteine and methionine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1296_Cellular_amino_acid_biosynthetic_process,_and_Cysteine_and_methionine_metabolism


id: CL:1298
description: Cysteine and methionine metabolism, and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1298_Cysteine_and_methionine_metabolism,_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:1299
description: Cysteine and methionine metabolism, and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1299_Cysteine_and_methionine_metabolism,_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:1300
description: Cysteine and methionine metabolism, and Lysine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1300_Cysteine_and_methionine_metabolism,_and_Lysine_biosynthesis


id: CL:1301
description: Sulfur amino acid metabolic process, and Homoserine dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1301_Sulfur_amino_acid_metabolic_process,_and_Homoserine_dehydrogenase


id: CL:1304
description: Transsulfuration, and Cysteine synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1304_Transsulfuration,_and_Cysteine_synthase_activity


id: CL:1358
description: Branched-chain amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1358_Branched-chain_amino_acid_metabolic_process


id: CL:1368
description: Leucine biosynthesis, and Thiamine pyrophosphate enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1368_Leucine_biosynthesis,_and_Thiamine_pyrophosphate_enzyme


id: CL:1382
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1382_Mixed,_incl._D-isomer_specific_2-hydroxyacid_dehydrogenase,_NAD-binding_domain,_and_Serine_biosynthesis

description:
  Mixed, incl. D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain, and Serine biosynthesis


id: CL:1384
description: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain, and Serine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1384_D-isomer_specific_2-hydroxyacid_dehydrogenase,_catalytic_domain,_and_Serine_biosynthesis


id: CL:1405
description: Phenylalanine, tyrosine and tryptophan biosynthesis, and Histidine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1405_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis,_and_Histidine_biosynthesis


id: CL:1407
description: Aromatic amino acid biosynthesis, and Anthranilate synthase component I-like
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1407_Aromatic_amino_acid_biosynthesis,_and_Anthranilate_synthase_component_I-like


id: CL:1409
description: Tryptophan biosynthesis, and Anthranilate synthase component I-like
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1409_Tryptophan_biosynthesis,_and_Anthranilate_synthase_component_I-like


id: CL:1458
description: Glutamine family amino acid biosynthetic process, and Proline dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1458_Glutamine_family_amino_acid_biosynthetic_process,_and_Proline_dehydrogenase


id: CL:1459
description: Arginine biosynthetic process, and Diaminopimelate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1459_Arginine_biosynthetic_process,_and_Diaminopimelate_biosynthetic_process


id: CL:1462
description: Arginine biosynthesis, and Amino acid binding
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1462_Arginine_biosynthesis,_and_Amino_acid_binding


id: CL:1479
description: Proline biosynthesis, and Proline dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1479_Proline_biosynthesis,_and_Proline_dehydrogenase


id: CL:149
description: L28p-like, and Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:149_L28p-like,_and_Structural_constituent_of_ribosome


id: CL:1496
description: Mixed, incl. Aminopeptidase N-like , N-terminal domain, and Peptidase M24
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1496_Mixed,_incl._Aminopeptidase_N-like_,_N-terminal_domain,_and_Peptidase_M24


id: CL:150
description: Mixed, incl. L28p-like, and Ribosomal large subunit assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:150_Mixed,_incl._L28p-like,_and_Ribosomal_large_subunit_assembly


id: CL:1512
description: Mostly uncharacterized, incl. beta-Alanine metabolism, and Innate Immune System
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1512_Mostly_uncharacterized,_incl._beta-Alanine_metabolism,_and_Innate_Immune_System


id: CL:1513
description: Mixed, incl. Chloroalkane and chloroalkene degradation, and Innate Immune System
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1513_Mixed,_incl._Chloroalkane_and_chloroalkene_degradation,_and_Innate_Immune_System


id: CL:1515
description: Mixed, incl. AsmA-like, C-terminal, and Acyl-CoA reductase (LuxC)
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1515_Mixed,_incl._AsmA-like,_C-terminal,_and_Acyl-CoA_reductase_(LuxC)


id: CL:1517
description: Mixed, incl. Acyl-CoA reductase (LuxC), and FecR protein
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1517_Mixed,_incl._Acyl-CoA_reductase_(LuxC),_and_FecR_protein


id: CL:1544
description: Mixed, incl. Peptidase C45, and Arginine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1544_Mixed,_incl._Peptidase_C45,_and_Arginine_catabolic_process


id: CL:1545
description: Mixed, incl. Peptidase C45, and L-methylmalonyl-CoA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1545_Mixed,_incl._Peptidase_C45,_and_L-methylmalonyl-CoA_metabolic_process


id: CL:1554
description: Mixed, incl. Arginine catabolic process, and Peptidyl-lysine modification to peptidyl-hypusine
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1554_Mixed,_incl._Arginine_catabolic_process,_and_Peptidyl-lysine_modification_to_peptidyl-hypusine


id: CL:1564
description: Mixed, incl. Thiamine metabolic process, and Queuosine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1564_Mixed,_incl._Thiamine_metabolic_process,_and_Queuosine_biosynthesis


id: CL:1588
description: Mixed, incl. D-amino acid metabolic process, and MazG nucleotide pyrophosphohydrolase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1588_Mixed,_incl._D-amino_acid_metabolic_process,_and_MazG_nucleotide_pyrophosphohydrolase_domain


id: CL:159
description: Mixed, incl. L28p-like, and Zinc-binding ribosomal protein
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:159_Mixed,_incl._L28p-like,_and_Zinc-binding_ribosomal_protein


id: CL:1608
description: Mixed, incl. Amidohydrolase 3, and HIT-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1608_Mixed,_incl._Amidohydrolase_3,_and_HIT-like_superfamily


id: CL:1621
description: Mixed, incl. Lipid biosynthetic process, and Ubiquinone and other terpenoid-quinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1621_Mixed,_incl._Lipid_biosynthetic_process,_and_Ubiquinone_and_other_terpenoid-quinone_biosynthesis


id: CL:1622
description: Mixed, incl. Isoprenoid metabolic process, and Fatty acid hydroxylase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1622_Mixed,_incl._Isoprenoid_metabolic_process,_and_Fatty_acid_hydroxylase


id: CL:1623
description: Mixed, incl. Isoprenoid metabolic process, and Fatty acid hydroxylase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1623_Mixed,_incl._Isoprenoid_metabolic_process,_and_Fatty_acid_hydroxylase


id: CL:1624
description: Mixed, incl. Isoprenoid metabolic process, and Fatty acid hydroxylase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1624_Mixed,_incl._Isoprenoid_metabolic_process,_and_Fatty_acid_hydroxylase


id: CL:1625
description: Mixed, incl. Carotenoid biosynthesis, and Terpenoid backbone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1625_Mixed,_incl._Carotenoid_biosynthesis,_and_Terpenoid_backbone_biosynthesis


id: CL:1626
description: Mixed, incl. Carotenoid biosynthesis, and Chromophore
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1626_Mixed,_incl._Carotenoid_biosynthesis,_and_Chromophore


id: CL:1646
description: Polyprenyl synthetase, and Asp/Glu racemase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1646_Polyprenyl_synthetase,_and_Asp/Glu_racemase


id: CL:1656
description: Mixed, incl. Steroid biosynthesis, and Monooxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1656_Mixed,_incl._Steroid_biosynthesis,_and_Monooxygenase


id: CL:1659
description: Steroid biosynthesis, and Monooxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1659_Steroid_biosynthesis,_and_Monooxygenase


id: CL:1680
description: Mixed, incl. Terpenoid backbone biosynthesis, and TspO/MBR-related superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1680_Mixed,_incl._Terpenoid_backbone_biosynthesis,_and_TspO/MBR-related_superfamily


id: CL:1682
description: GHMP kinase, C-terminal domain superfamily, and Nicotinate-nucleotide adenylyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1682_GHMP_kinase,_C-terminal_domain_superfamily,_and_Nicotinate-nucleotide_adenylyltransferase_activity


id: CL:1692
description: Mixed, incl. TspO/MBR-related superfamily, and Polyprenyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1692_Mixed,_incl._TspO/MBR-related_superfamily,_and_Polyprenyltransferase_activity


id: CL:1706
description: Mixed, incl. TAT protein transport complex, and Polysaccharide biosynthesis C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1706_Mixed,_incl._TAT_protein_transport_complex,_and_Polysaccharide_biosynthesis_C-terminal_domain


id: CL:1707
description: Mixed, incl. TAT protein transport complex, and DNA replication initiation
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1707_Mixed,_incl._TAT_protein_transport_complex,_and_DNA_replication_initiation


id: CL:1709
description: Mixed, incl. DNA replication initiation, and Peptidase family M1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1709_Mixed,_incl._DNA_replication_initiation,_and_Peptidase_family_M1_domain


id: CL:1723
description: TAT protein transport complex, and Protein of unknown function (DUF541)
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1723_TAT_protein_transport_complex,_and_Protein_of_unknown_function_(DUF541)


id: CL:1733
description: Mixed, incl. Linoleic acid metabolism, and Sugar-phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1733_Mixed,_incl._Linoleic_acid_metabolism,_and_Sugar-phosphatase_activity


id: CL:1753
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1753_Mixed,_incl._Glycerophospholipid_metabolism,_and_Ubiquinone_and_other_terpenoid-quinone_biosynthesis

description:
  Mixed, incl. Glycerophospholipid metabolism, and Ubiquinone and other terpenoid-quinone biosynthesis


id: CL:1754
description: Mixed, incl. Glycerophospholipid metabolism, and Menaquinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1754_Mixed,_incl._Glycerophospholipid_metabolism,_and_Menaquinone_biosynthesis


id: CL:1756
description: Mixed, incl. Menaquinone biosynthesis, and NRAMP family
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1756_Mixed,_incl._Menaquinone_biosynthesis,_and_NRAMP_family


id: CL:1758
description: Menaquinone biosynthesis, and Phenylacetic acid degradation-related domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1758_Menaquinone_biosynthesis,_and_Phenylacetic_acid_degradation-related_domain


id: CL:178
description: Mixed, incl. Small ribosomal subunit, and K Homology domain, type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:178_Mixed,_incl._Small_ribosomal_subunit,_and_K_Homology_domain,_type_2


id: CL:1789
description: Mixed, incl. Phospholipid metabolism, and Phospholipid/glycerol acyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1789_Mixed,_incl._Phospholipid_metabolism,_and_Phospholipid/glycerol_acyltransferase


id: CL:1791
description: Phospholipid/glycerol acyltransferase, and Phospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1791_Phospholipid/glycerol_acyltransferase,_and_Phospholipid_metabolism


id: CL:1816
description: Mixed, incl. Biotin metabolic process, and JmjC domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1816_Mixed,_incl._Biotin_metabolic_process,_and_JmjC_domain


id: CL:1817
description: Mixed, incl. Biotin metabolic process, and JmjC domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1817_Mixed,_incl._Biotin_metabolic_process,_and_JmjC_domain


id: CL:1820
description: Biotin metabolic process, and 1-butanol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1820_Biotin_metabolic_process,_and_1-butanol_metabolic_process


id: CL:1835
description: Aminotransferase, class I/classII, and NAD-dependent epimerase/dehydratase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1835_Aminotransferase,_class_I/classII,_and_NAD-dependent_epimerase/dehydratase


id: CL:1844
description: Mixed, incl. ubiE/COQ5 methyltransferase family, and Phosphoric diester hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1844_Mixed,_incl._ubiE/COQ5_methyltransferase_family,_and_Phosphoric_diester_hydrolase_activity


id: CL:1861
description: Mixed, incl. Nucleophile aminohydrolases, N-terminal, and Asp/Glu racemase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1861_Mixed,_incl._Nucleophile_aminohydrolases,_N-terminal,_and_Asp/Glu_racemase


id: CL:1863
description: Asparagine metabolic process, and Cyanoamino acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1863_Asparagine_metabolic_process,_and_Cyanoamino_acid_metabolism


id: CL:1889
description: Mixed, incl. Oxidoreductase activity, and Sulfur compound metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1889_Mixed,_incl._Oxidoreductase_activity,_and_Sulfur_compound_metabolic_process


id: CL:1890
description: Mixed, incl. Oxidoreductase activity, and Sulfur compound metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1890_Mixed,_incl._Oxidoreductase_activity,_and_Sulfur_compound_metabolic_process


id: CL:1891
description: Mixed, incl. Oxidoreductase activity, and Sulfur compound metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1891_Mixed,_incl._Oxidoreductase_activity,_and_Sulfur_compound_metabolic_process


id: CL:1892
description: Mixed, incl. Oxidative phosphorylation, and Thioredoxin-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1892_Mixed,_incl._Oxidative_phosphorylation,_and_Thioredoxin-like_superfamily


id: CL:1893
description: Mixed, incl. Oxidative phosphorylation, and Thioredoxin-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1893_Mixed,_incl._Oxidative_phosphorylation,_and_Thioredoxin-like_superfamily


id: CL:1894
description: Mixed, incl. Oxidative phosphorylation, and Electron transfer activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1894_Mixed,_incl._Oxidative_phosphorylation,_and_Electron_transfer_activity


id: CL:1896
description: Mixed, incl. Electron transfer activity, and Copper chaperone SCO1/SenC
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1896_Mixed,_incl._Electron_transfer_activity,_and_Copper_chaperone_SCO1/SenC


id: CL:1897
description: Electron transfer activity, and Copper chaperone SCO1/SenC
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1897_Electron_transfer_activity,_and_Copper_chaperone_SCO1/SenC


id: CL:1899
description: Electron transfer activity, and Copper chaperone SCO1/SenC
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1899_Electron_transfer_activity,_and_Copper_chaperone_SCO1/SenC


id: CL:1901
description: Cytochrome c-like domain, and Plant-pathogen interaction
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1901_Cytochrome_c-like_domain,_and_Plant-pathogen_interaction


id: CL:1936
description: Mixed, incl. Cytochrome c-like domain, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1936_Mixed,_incl._Cytochrome_c-like_domain,_and_4Fe-4S_binding_domain


id: CL:1941
description: Cytochrome c-like domain, and Heme binding
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1941_Cytochrome_c-like_domain,_and_Heme_binding


id: CL:1964
description: Mixed, incl. Peptidase M16, C-terminal, and Antiporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1964_Mixed,_incl._Peptidase_M16,_C-terminal,_and_Antiporter_activity


id: CL:1966
description: Mixed, incl. Peptidase M16, C-terminal, and Band 7 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1966_Mixed,_incl._Peptidase_M16,_C-terminal,_and_Band_7_domain


id: CL:1984
description: Mixed, incl. Cation:cation antiporter activity, and NADH dehydrogenase (quinone) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1984_Mixed,_incl._Cation:cation_antiporter_activity,_and_NADH_dehydrogenase_(quinone)_activity


id: CL:199
description: Large ribosomal subunit, and Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:199_Large_ribosomal_subunit,_and_Cyclophilin-type_peptidyl-prolyl_cis-trans_isomerase,_conserved_site


id: CL:1997
description: Response to oxidative stress, and Thioredoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1997_Response_to_oxidative_stress,_and_Thioredoxin_domain


id: CL:1998
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1998_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor,_and_Thioredoxin_domain

description:
  Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor, and Thioredoxin domain


id: CL:1999
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:1999_Mixed,_incl._Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor,_and_Nitronate_monooxygenase_activity

description:
  Mixed, incl. Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor, and Nitronate monooxygenase activity


id: CL:2001
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2001_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: CL:2037
description: Mixed, incl. Reactive oxygen species metabolic process, and Deglycase PfpI
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2037_Mixed,_incl._Reactive_oxygen_species_metabolic_process,_and_Deglycase_PfpI


id: CL:2038
description: Mixed, incl. Pyridine nucleotide-disulphide oxidoreductase, and Disulfide oxidoreductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2038_Mixed,_incl._Pyridine_nucleotide-disulphide_oxidoreductase,_and_Disulfide_oxidoreductase_activity


id: CL:2039
description: Pyridine nucleotide-disulphide oxidoreductase, and Thioredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2039_Pyridine_nucleotide-disulphide_oxidoreductase,_and_Thioredoxin


id: CL:2050
description: Mixed, incl. Peroxiredoxin, C-terminal, and Outer membrane protein beta-barrel domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2050_Mixed,_incl._Peroxiredoxin,_C-terminal,_and_Outer_membrane_protein_beta-barrel_domain


id: CL:2074
description: Mixed, incl. Iron-sulfur cluster assembly, and Cysteine desulfurase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2074_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Cysteine_desulfurase_activity


id: CL:2075
description: Mixed, incl. Iron-sulfur cluster assembly, and Cysteine desulfurase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2075_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Cysteine_desulfurase_activity


id: CL:2077
description: Iron-sulfur cluster assembly, and Cysteine desulfurase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2077_Iron-sulfur_cluster_assembly,_and_Cysteine_desulfurase_activity


id: CL:2099
description: Mixed, incl. Fe-S cluster assembly domain superfamily, and RNA (guanine-N7)-methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2099_Mixed,_incl._Fe-S_cluster_assembly_domain_superfamily,_and_RNA_(guanine-N7)-methylation


id: CL:2118
description: Mixed, incl. Glycoside metabolic process, and Protein of unknown function DUF2911
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2118_Mixed,_incl._Glycoside_metabolic_process,_and_Protein_of_unknown_function_DUF2911


id: CL:2121
description: Mixed, incl. Glycoside metabolic process, and Protein of unknown function DUF2911
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2121_Mixed,_incl._Glycoside_metabolic_process,_and_Protein_of_unknown_function_DUF2911


id: CL:2150
description: Mixed, incl. Sulfur metabolism, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2150_Mixed,_incl._Sulfur_metabolism,_and_Nitrogen_metabolism


id: CL:2151
description: Mixed, incl. Nitrogen metabolism, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2151_Mixed,_incl._Nitrogen_metabolism,_and_Glycosyl_transferase_family_2


id: CL:2153
description: Mixed, incl. 4Fe-4S binding domain, and Alkylhydroperoxidase AhpD core
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2153_Mixed,_incl._4Fe-4S_binding_domain,_and_Alkylhydroperoxidase_AhpD_core


id: CL:2156
description: Mixed, incl. 4Fe-4S binding domain, and Steroid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2156_Mixed,_incl._4Fe-4S_binding_domain,_and_Steroid_biosynthesis


id: CL:2180
description: Multiheme cytochrome superfamily, and ResB-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2180_Multiheme_cytochrome_superfamily,_and_ResB-like_domain


id: CL:2193
description: Mixed, incl. Sulfate assimilation, and Siroheme metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2193_Mixed,_incl._Sulfate_assimilation,_and_Siroheme_metabolic_process


id: CL:2195
description: Siroheme metabolic process, and Sulfate reduction
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2195_Siroheme_metabolic_process,_and_Sulfate_reduction


id: CL:2217
description: Mixed, incl. ABC-2 family transporter protein, and ABC transporter-like, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2217_Mixed,_incl._ABC-2_family_transporter_protein,_and_ABC_transporter-like,_ATP-binding_domain


id: CL:2218
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2218_Mostly_uncharacterized,_incl._ABC-2_family_transporter_protein,_and_Nitrous_oxide_reductase,_N-terminal

description:
  Mostly uncharacterized, incl. ABC-2 family transporter protein, and Nitrous oxide reductase, N-terminal


id: CL:2223
description: Mixed, incl. Pectin lyase fold, and ABC-type transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2223_Mixed,_incl._Pectin_lyase_fold,_and_ABC-type_transporter_activity


id: CL:2241
description: Mixed, incl. ABC-2 family transporter protein, and Dimeric alpha-beta barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2241_Mixed,_incl._ABC-2_family_transporter_protein,_and_Dimeric_alpha-beta_barrel


id: CL:2272
description: Mixed, incl. Signal, and Cationic antimicrobial peptide (CAMP) resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2272_Mixed,_incl._Signal,_and_Cationic_antimicrobial_peptide_(CAMP)_resistance


id: CL:2273
description: Mixed, incl. Signal, and Cationic antimicrobial peptide (CAMP) resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2273_Mixed,_incl._Signal,_and_Cationic_antimicrobial_peptide_(CAMP)_resistance


id: CL:2274
description: Mixed, incl. Organic substance transport, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2274_Mixed,_incl._Organic_substance_transport,_and_Signal


id: CL:2275
description: Mixed, incl. Organic substance transport, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2275_Mixed,_incl._Organic_substance_transport,_and_Signal


id: CL:2276
description: Mixed, incl. Macromolecule localization, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2276_Mixed,_incl._Macromolecule_localization,_and_Signal


id: CL:2277
description: Mostly uncharacterized, incl. Macromolecule localization, and Molecular transducer activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2277_Mostly_uncharacterized,_incl._Macromolecule_localization,_and_Molecular_transducer_activity


id: CL:2278
description: Mostly uncharacterized, incl. Macromolecule localization, and Molecular transducer activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2278_Mostly_uncharacterized,_incl._Macromolecule_localization,_and_Molecular_transducer_activity


id: CL:2279
description: Mostly uncharacterized, incl. Envelope, and Cationic antimicrobial peptide (CAMP) resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2279_Mostly_uncharacterized,_incl._Envelope,_and_Cationic_antimicrobial_peptide_(CAMP)_resistance


id: CL:2281
description: Mostly uncharacterized, incl. Envelope, and Protein of unknown function DUF4252
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2281_Mostly_uncharacterized,_incl._Envelope,_and_Protein_of_unknown_function_DUF4252


id: CL:2282
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2282_Mostly_uncharacterized,_incl._Tetratricopeptide-like_helical_domain_superfamily,_and_Protein_of_unknown_function_DUF4252

description:
  Mostly uncharacterized, incl. Tetratricopeptide-like helical domain superfamily, and Protein of unknown function DUF4252


id: CL:2283
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2283_Mostly_uncharacterized,_incl._Protein_of_unknown_function_DUF4252,_and_PD-(D/E)XK_endonuclease-like_domain_superfamily

description:
  Mostly uncharacterized, incl. Protein of unknown function DUF4252, and PD-(D/E)XK endonuclease-like domain superfamily


id: CL:2284
description: Mostly uncharacterized, incl. Protein of unknown function DUF4252, and Secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2284_Mostly_uncharacterized,_incl._Protein_of_unknown_function_DUF4252,_and_Secretion


id: CL:2285
description: Mostly uncharacterized, incl. Secretion, and SPOR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2285_Mostly_uncharacterized,_incl._Secretion,_and_SPOR_domain


id: CL:2287
description: Mostly uncharacterized, incl. SPOR domain, and Lactate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2287_Mostly_uncharacterized,_incl._SPOR_domain,_and_Lactate_metabolic_process


id: CL:2288
description: Mostly uncharacterized, incl. SPOR domain, and Retropepsin-like domain, bacterial
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2288_Mostly_uncharacterized,_incl._SPOR_domain,_and_Retropepsin-like_domain,_bacterial


id: CL:2289
description: Mostly uncharacterized, incl. SPOR domain, and Retropepsin-like domain, bacterial
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2289_Mostly_uncharacterized,_incl._SPOR_domain,_and_Retropepsin-like_domain,_bacterial


id: CL:2291
description: Mixed, incl. Retropepsin-like domain, bacterial, and Lysozyme-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2291_Mixed,_incl._Retropepsin-like_domain,_bacterial,_and_Lysozyme-like_domain_superfamily


id: CL:2304
description: Mixed, incl. SPOR domain, and Esterase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2304_Mixed,_incl._SPOR_domain,_and_Esterase-like


id: CL:2317
description: Mixed, incl. ER-Phagosome pathway, and Outer membrane protein beta-barrel domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2317_Mixed,_incl._ER-Phagosome_pathway,_and_Outer_membrane_protein_beta-barrel_domain_2


id: CL:2333
description: Mixed, incl. Lactate metabolic process, and Peptidase M4/M1, CTD superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2333_Mixed,_incl._Lactate_metabolic_process,_and_Peptidase_M4/M1,_CTD_superfamily


id: CL:235
description: RNA polymerase complex, and Transcription termination
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:235_RNA_polymerase_complex,_and_Transcription_termination


id: CL:2354
description: Protein of unknown function DUF4252, and Peptidase family S41
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2354_Protein_of_unknown_function_DUF4252,_and_Peptidase_family_S41


id: CL:2363
description: Mixed, incl. PD-(D/E)XK endonuclease-like domain superfamily, and Regulation of growth
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2363_Mixed,_incl._PD-(D/E)XK_endonuclease-like_domain_superfamily,_and_Regulation_of_growth


id: CL:2374
description: Mixed, incl. Nucleoside monophosphate catabolic process, and Tetratricopeptide repeat 1
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2374_Mixed,_incl._Nucleoside_monophosphate_catabolic_process,_and_Tetratricopeptide_repeat_1


id: CL:2386
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2386_Mixed,_incl._Response_to_organic_substance,_and_Outer_membrane_protein_transport_protein_(OMPP1/FadL/TodX)

description:
  Mixed, incl. Response to organic substance, and Outer membrane protein transport protein (OMPP1/FadL/TodX)


id: CL:2402
description: Mixed, incl. TRAM domain, and Alcohol catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2402_Mixed,_incl._TRAM_domain,_and_Alcohol_catabolic_process


id: CL:2420
description: Mixed, incl. Protein transport, and TonB, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2420_Mixed,_incl._Protein_transport,_and_TonB,_C-terminal


id: CL:2421
description: Mixed, incl. Biopolymer transport protein ExbD/TolR, and TonB, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2421_Mixed,_incl._Biopolymer_transport_protein_ExbD/TolR,_and_TonB,_C-terminal


id: CL:2424
description: Biopolymer transport protein ExbD/TolR, and MotA/TolQ/ExbB proton channel
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2424_Biopolymer_transport_protein_ExbD/TolR,_and_MotA/TolQ/ExbB_proton_channel


id: CL:2447
description: Lipid transporter activity, and Transporter-associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2447_Lipid_transporter_activity,_and_Transporter-associated_domain


id: CL:2457
description: Mixed, incl. Lipid degradation, and Outer membrane protein/outer membrane enzyme PagP, beta-barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2457_Mixed,_incl._Lipid_degradation,_and_Outer_membrane_protein/outer_membrane_enzyme_PagP,_beta-barrel


id: CL:2470
description: Mixed, incl. AsmA-like, C-terminal, and Protein of unknown function DUF4249
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2470_Mixed,_incl._AsmA-like,_C-terminal,_and_Protein_of_unknown_function_DUF4249


id: CL:2479
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2479_Mostly_uncharacterized,_incl._Putative_auto-transporter_adhesin,_head_GIN_domain,_and_Chitin_binding

description:
  Mostly uncharacterized, incl. Putative auto-transporter adhesin, head GIN domain, and Chitin binding


id: CL:2481
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2481_Mostly_uncharacterized,_incl._Putative_auto-transporter_adhesin,_head_GIN_domain,_and_Tricarboxylic_acid_metabolic_process

description:
  Mostly uncharacterized, incl. Putative auto-transporter adhesin, head GIN domain, and Tricarboxylic acid metabolic process


id: CL:2482
description: Mixed, incl. Putative auto-transporter adhesin, head GIN domain, and Xylene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2482_Mixed,_incl._Putative_auto-transporter_adhesin,_head_GIN_domain,_and_Xylene_degradation


id: CL:2483
description: Mixed, incl. Xylene degradation, and RmlD-like substrate binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2483_Mixed,_incl._Xylene_degradation,_and_RmlD-like_substrate_binding_domain


id: CL:2494
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2494_Mixed,_incl._Putative_auto-transporter_adhesin,_head_GIN_domain,_and_Sigma_factor_antagonist_activity

description:
  Mixed, incl. Putative auto-transporter adhesin, head GIN domain, and Sigma factor antagonist activity


id: CL:2503
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2503_Mixed,_incl._Tricarboxylic_acid_metabolic_process,_and_Mismatch_base_pair_DNA_N-glycosylase_activity

description:
  Mixed, incl. Tricarboxylic acid metabolic process, and Mismatch base pair DNA N-glycosylase activity


id: CL:2524
description: Mixed, incl. K Homology domain, type 1, and Cytokinetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2524_Mixed,_incl._K_Homology_domain,_type_1,_and_Cytokinetic_process


id: CL:2533
description: Mixed, incl. Peptidase M4/M1, CTD superfamily, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2533_Mixed,_incl._Peptidase_M4/M1,_CTD_superfamily,_and_Sigma-70,_region_4


id: CL:2549
description: Mixed, incl. Regulation of DNA recombination, and Protein of unknown function DUF2911
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2549_Mixed,_incl._Regulation_of_DNA_recombination,_and_Protein_of_unknown_function_DUF2911


id: CL:2550
description: Mixed, incl. Regulation of DNA recombination, and Secretion system C-terminal sorting domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2550_Mixed,_incl._Regulation_of_DNA_recombination,_and_Secretion_system_C-terminal_sorting_domain


id: CL:2559
description: Mixed, incl. Protein of unknown function DUF2911, and Peptidase M23
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2559_Mixed,_incl._Protein_of_unknown_function_DUF2911,_and_Peptidase_M23


id: CL:2573
description: Mostly uncharacterized, incl. Lipoprotein, and Membrane organization
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2573_Mostly_uncharacterized,_incl._Lipoprotein,_and_Membrane_organization


id: CL:2575
description: Mostly uncharacterized, incl. Lipoprotein, and Protein of unknown function DUF1573
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2575_Mostly_uncharacterized,_incl._Lipoprotein,_and_Protein_of_unknown_function_DUF1573


id: CL:2576
description: Mixed, incl. Lipoprotein, and Outer membrane protein/outer membrane enzyme PagP, beta-barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2576_Mixed,_incl._Lipoprotein,_and_Outer_membrane_protein/outer_membrane_enzyme_PagP,_beta-barrel


id: CL:2577
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2577_Mixed,_incl._Sulfatase-modifying_factor_enzyme,_and_Outer_membrane_protein/outer_membrane_enzyme_PagP,_beta-barrel

description:
  Mixed, incl. Sulfatase-modifying factor enzyme, and Outer membrane protein/outer membrane enzyme PagP, beta-barrel


id: CL:2579
description: Mixed, incl. Sulfatase-modifying factor enzyme, and Carbohydrate-binding-like fold
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2579_Mixed,_incl._Sulfatase-modifying_factor_enzyme,_and_Carbohydrate-binding-like_fold


id: CL:2581
description: Mixed, incl. Outer membrane protein beta-barrel domain 2, and Sulfatase-modifying factor enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2581_Mixed,_incl._Outer_membrane_protein_beta-barrel_domain_2,_and_Sulfatase-modifying_factor_enzyme


id: CL:2593
description: Mixed, incl. Carbohydrate-binding-like fold, and Peptidoglycan glycosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2593_Mixed,_incl._Carbohydrate-binding-like_fold,_and_Peptidoglycan_glycosyltransferase_activity


id: CL:2613
description: Mixed, incl. Acyl-CoA reductase (LuxC), and ANL, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2613_Mixed,_incl._Acyl-CoA_reductase_(LuxC),_and_ANL,_N-terminal_domain


id: CL:2625
description: Mostly uncharacterized, incl. Protein of unknown function DUF1573, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2625_Mostly_uncharacterized,_incl._Protein_of_unknown_function_DUF1573,_and_Tetratricopeptide_repeat


id: CL:2628
description: Mostly uncharacterized, incl. Tetratricopeptide repeat, and Uroporphyrinogen-III synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2628_Mostly_uncharacterized,_incl._Tetratricopeptide_repeat,_and_Uroporphyrinogen-III_synthase


id: CL:2631
description: Mixed, incl. Uroporphyrinogen-III synthase, and GH3 family
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2631_Mixed,_incl._Uroporphyrinogen-III_synthase,_and_GH3_family


id: CL:2647
description: Mixed, incl. Tetratricopeptide repeat, and Chaperone protein Skp
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2647_Mixed,_incl._Tetratricopeptide_repeat,_and_Chaperone_protein_Skp


id: CL:2671
description: Mixed, incl. TRAM domain, and DNA binding HTH domain, Fis-type
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2671_Mixed,_incl._TRAM_domain,_and_DNA_binding_HTH_domain,_Fis-type


id: CL:2681
description: Mixed, incl. NAD metabolic process, and Domain of unknown function DUF4136
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2681_Mixed,_incl._NAD_metabolic_process,_and_Domain_of_unknown_function_DUF4136


id: CL:2697
description: Mixed, incl. NlpC/P60 family, and 4-phosphopantetheinyl transferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2697_Mixed,_incl._NlpC/P60_family,_and_4-phosphopantetheinyl_transferase_domain


id: CL:2699
description: Mixed, incl. 4-phosphopantetheinyl transferase domain, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2699_Mixed,_incl._4-phosphopantetheinyl_transferase_domain,_and_Coenzyme_A_biosynthesis


id: CL:2717
description: Mixed, incl. Von Willebrand factor, type A, and Sel1-like repeats.
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2717_Mixed,_incl._Von_Willebrand_factor,_type_A,_and_Sel1-like_repeats.


id: CL:2721
description: Von Willebrand factor, type A, and Sel1-like repeats.
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2721_Von_Willebrand_factor,_type_A,_and_Sel1-like_repeats.


id: CL:2744
description: Mixed, incl. RecF/RecN/SMC, N-terminal, and Pseudouridine synthase, RsuA/RluB/E/F, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2744_Mixed,_incl._RecF/RecN/SMC,_N-terminal,_and_Pseudouridine_synthase,_RsuA/RluB/E/F,_conserved_site


id: CL:2762
description: Mixed, incl. Peptidoglycan biosynthetic process, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2762_Mixed,_incl._Peptidoglycan_biosynthetic_process,_and_Cell_division


id: CL:2763
description: Mixed, incl. Peptidoglycan biosynthetic process, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2763_Mixed,_incl._Peptidoglycan_biosynthetic_process,_and_Cell_division


id: CL:2765
description: Mixed, incl. Cell cycle, and Peptidoglycan glycosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2765_Mixed,_incl._Cell_cycle,_and_Peptidoglycan_glycosyltransferase_activity


id: CL:2766
description: Cell cycle, and Regulation of cell shape
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2766_Cell_cycle,_and_Regulation_of_cell_shape


id: CL:2768
description: Regulation of cell shape, and Penicillin-binding Protein dimerisation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2768_Regulation_of_cell_shape,_and_Penicillin-binding_Protein_dimerisation_domain


id: CL:2773
description: Mur ligase, C-terminal, and D-Alanine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2773_Mur_ligase,_C-terminal,_and_D-Alanine_metabolism


id: CL:2821
description: Transglycosylase, and Transglycosylase SLT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2821_Transglycosylase,_and_Transglycosylase_SLT_domain


id: CL:2837
description: Mixed, incl. Peptidase S24-like, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2837_Mixed,_incl._Peptidase_S24-like,_and_AAA_domain


id: CL:2852
description: Mixed, incl. Membrane organization, and Cis-trans isomerase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2852_Mixed,_incl._Membrane_organization,_and_Cis-trans_isomerase_activity


id: CL:2854
description: Membrane assembly, and Linoleic acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2854_Membrane_assembly,_and_Linoleic_acid_metabolism


id: CL:2868
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2868_Mixed,_incl._AAA_domain_(dynein-related_subfamily),_and_Peptidyl-prolyl_cis-trans_isomerase,_PpiC-type

description:
  Mixed, incl. AAA domain (dynein-related subfamily), and Peptidyl-prolyl cis-trans isomerase, PpiC-type


id: CL:2878
description: Mostly uncharacterized, incl. Protein export, and TerB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2878_Mostly_uncharacterized,_incl._Protein_export,_and_TerB-like


id: CL:2880
description: Mixed, incl. YtxH-like protein, and Peptidase S24-like
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2880_Mixed,_incl._YtxH-like_protein,_and_Peptidase_S24-like


id: CL:2882
description: Mixed, incl. YtxH-like protein, and Peptidase S24-like
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2882_Mixed,_incl._YtxH-like_protein,_and_Peptidase_S24-like


id: CL:2906
description: Mixed, incl. TerB-like, and Protein-exporting ATPase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2906_Mixed,_incl._TerB-like,_and_Protein-exporting_ATPase_activity


id: CL:2922
description: Mixed, incl. Quorum sensing, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2922_Mixed,_incl._Quorum_sensing,_and_Signal


id: CL:2923
description: Mixed, incl. Quorum sensing, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2923_Mixed,_incl._Quorum_sensing,_and_Signal


id: CL:2924
description: Mixed, incl. Quorum sensing, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2924_Mixed,_incl._Quorum_sensing,_and_Signal


id: CL:2925
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2925_Mostly_uncharacterized,_incl._Glycosyl_transferase,_family_1,_and_Nucleotide-diphospho-sugar_transferases

description:
  Mostly uncharacterized, incl. Glycosyl transferase, family 1, and Nucleotide-diphospho-sugar transferases


id: CL:2927
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2927_Mostly_uncharacterized,_incl._Glycosyl_transferase,_family_1,_and_Capsule_assembly_protein_Wzi_superfamily

description:
  Mostly uncharacterized, incl. Glycosyl transferase, family 1, and Capsule assembly protein Wzi superfamily


id: CL:2929
description: Mixed, incl. Glycosyl transferase, family 1, and Glycosyltransferase 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2929_Mixed,_incl._Glycosyl_transferase,_family_1,_and_Glycosyltransferase_2-like


id: CL:2932
description: Mixed, incl. Glycosyl transferase, family 1, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2932_Mixed,_incl._Glycosyl_transferase,_family_1,_and_Glycosyl_transferase_family_2


id: CL:2935
description: Mixed, incl. Glycosyl transferase, family 1, and Lipid glycosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2935_Mixed,_incl._Glycosyl_transferase,_family_1,_and_Lipid_glycosylation


id: CL:2953
description: Mixed, incl. Capsule assembly protein Wzi superfamily, and TPR repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2953_Mixed,_incl._Capsule_assembly_protein_Wzi_superfamily,_and_TPR_repeat


id: CL:2989
description: Mixed, incl. Sulfur compound binding, and Capsule assembly protein Wzi
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2989_Mixed,_incl._Sulfur_compound_binding,_and_Capsule_assembly_protein_Wzi


id: CL:2990
description: Mixed, incl. Sulfur compound catabolic process, and TSP type-3 repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:2990_Mixed,_incl._Sulfur_compound_catabolic_process,_and_TSP_type-3_repeat


id: CL:300
description: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding, and Glutamyl/glutaminyl-tRNA synthetase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:300_Aminoacyl-tRNA_synthetase,_class_Ia,_anticodon-binding,_and_Glutamyl/glutaminyl-tRNA_synthetase


id: CL:3005
description: Mixed, incl. Capsule assembly protein Wzi, and SNARE associated Golgi protein
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3005_Mixed,_incl._Capsule_assembly_protein_Wzi,_and_SNARE_associated_Golgi_protein


id: CL:3024
description: Mixed, incl. Nucleotidyl transferase, and Polysaccharide biosynthesis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3024_Mixed,_incl._Nucleotidyl_transferase,_and_Polysaccharide_biosynthesis_protein


id: CL:3042
description: Mixed, incl. Porin activity, and Quorum sensing
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3042_Mixed,_incl._Porin_activity,_and_Quorum_sensing


id: CL:3043
description: Mixed, incl. Quorum sensing, and Porin activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3043_Mixed,_incl._Quorum_sensing,_and_Porin_activity


id: CL:3045
description: Mixed, incl. Porin activity, and CHU_C Type IX secretion signal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3045_Mixed,_incl._Porin_activity,_and_CHU_C_Type_IX_secretion_signal_domain


id: CL:3048
description: Mixed, incl. Lectin, and Protein of unknown function DUF4402
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3048_Mixed,_incl._Lectin,_and_Protein_of_unknown_function_DUF4402


id: CL:3051
description: Mixed, incl. Lectin, and Protein of unknown function DUF4402
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3051_Mixed,_incl._Lectin,_and_Protein_of_unknown_function_DUF4402


id: CL:3053
description: Protein of unknown function DUF4402, and Lectin
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3053_Protein_of_unknown_function_DUF4402,_and_Lectin


id: CL:3064
description: Mixed, incl. Lectin, and TSP type-3 repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3064_Mixed,_incl._Lectin,_and_TSP_type-3_repeat


id: CL:3076
description: Mixed, incl. NodB homology domain, and Glycosyltransferase Family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3076_Mixed,_incl._NodB_homology_domain,_and_Glycosyltransferase_Family_4


id: CL:3092
description: CHU_C Type IX secretion signal domain, and Outer membrane protein, bacterial
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3092_CHU_C_Type_IX_secretion_signal_domain,_and_Outer_membrane_protein,_bacterial


id: CL:3094
description: WD40-like beta propeller, and Ig-like domain CHU_C associated
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3094_WD40-like_beta_propeller,_and_Ig-like_domain_CHU_C_associated


id: CL:3117
description: Mixed, incl. HYR domain, and Peptidase S8, subtilisin-related
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3117_Mixed,_incl._HYR_domain,_and_Peptidase_S8,_subtilisin-related


id: CL:3119
description: Mixed, incl. Peptidase S8, subtilisin-related, and Zinc-dependent metalloprotease
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3119_Mixed,_incl._Peptidase_S8,_subtilisin-related,_and_Zinc-dependent_metalloprotease


id: CL:3135
description: Mixed, incl. HYR domain, and Outer membrane protein beta-barrel domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3135_Mixed,_incl._HYR_domain,_and_Outer_membrane_protein_beta-barrel_domain


id: CL:3145
description: Mixed, incl. 5-nucleotidase activity, and Helix-hairpin-helix DNA-binding motif class 1
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3145_Mixed,_incl._5-nucleotidase_activity,_and_Helix-hairpin-helix_DNA-binding_motif_class_1


id: CL:3157
description: Mixed, incl. YceI-like domain, and HNH nuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3157_Mixed,_incl._YceI-like_domain,_and_HNH_nuclease


id: CL:3158
description: Mixed, incl. HNH nuclease, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3158_Mixed,_incl._HNH_nuclease,_and_Methyltransferase_domain


id: CL:3169
description: YceI-like domain, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3169_YceI-like_domain,_and_Bacterial_chemotaxis


id: CL:3178
description: Mixed, incl. DNA integration, and Outer membrane protein beta-barrel domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3178_Mixed,_incl._DNA_integration,_and_Outer_membrane_protein_beta-barrel_domain_2


id: CL:3188
description: Mixed, incl. Ammonium/urea transporter, and Phosphoribosyl-ATP pyrophosphohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3188_Mixed,_incl._Ammonium/urea_transporter,_and_Phosphoribosyl-ATP_pyrophosphohydrolase


id: CL:3205
description: Mixed, incl. RNA methyltransferase, and Tetrapyrrole methylase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3205_Mixed,_incl._RNA_methyltransferase,_and_Tetrapyrrole_methylase


id: CL:3216
description: Mixed, incl. Taxis, and TSP type-3 repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3216_Mixed,_incl._Taxis,_and_TSP_type-3_repeat


id: CL:3237
description: Mixed, incl. Carbon fixation, and Zinc carboxypeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3237_Mixed,_incl._Carbon_fixation,_and_Zinc_carboxypeptidase


id: CL:3252
description: Mixed, incl. RNA polymerase sigma-70 like, and Cysteine-type peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3252_Mixed,_incl._RNA_polymerase_sigma-70_like,_and_Cysteine-type_peptidase_activity


id: CL:3253
description: Mixed, incl. RNA polymerase sigma-70 like, and PASTA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3253_Mixed,_incl._RNA_polymerase_sigma-70_like,_and_PASTA_domain


id: CL:3282
description: Mixed, incl. Domain of unknown function DUF1232, and AI-2E family transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3282_Mixed,_incl._Domain_of_unknown_function_DUF1232,_and_AI-2E_family_transporter


id: CL:329
description: Mixed, incl. YebC-like, and RF-1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:329_Mixed,_incl._YebC-like,_and_RF-1_domain


id: CL:3294
description: Mixed, incl. MGS-like domain, and RNA 3-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3294_Mixed,_incl._MGS-like_domain,_and_RNA_3-end_processing


id: CL:3306
description: Mostly uncharacterized, incl. NTF2-like domain superfamily, and Tyrosinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3306_Mostly_uncharacterized,_incl._NTF2-like_domain_superfamily,_and_Tyrosinase_activity


id: CL:3307
description: Mostly uncharacterized, incl. Protein of unknown function DUF1328, and Helix_turn_helix ASNC type
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3307_Mostly_uncharacterized,_incl._Protein_of_unknown_function_DUF1328,_and_Helix_turn_helix_ASNC_type


id: CL:3308
description: Mixed, incl. Protein of unknown function DUF1328, and Helix_turn_helix ASNC type
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3308_Mixed,_incl._Protein_of_unknown_function_DUF1328,_and_Helix_turn_helix_ASNC_type


id: CL:3319
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3319_Mixed,_incl._Long-chain_fatty_acid_transporter_activity,_and_Outer_membrane_protein_beta-barrel_family

description:
  Mixed, incl. Long-chain fatty acid transporter activity, and Outer membrane protein beta-barrel family


id: CL:3328
description: Mixed, incl. NTF2-like domain superfamily, and Tyrosinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3328_Mixed,_incl._NTF2-like_domain_superfamily,_and_Tyrosinase_activity


id: CL:3348
description: Mixed, incl. Nitrotoluene degradation, and YceI-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3348_Mixed,_incl._Nitrotoluene_degradation,_and_YceI-like_domain


id: CL:3349
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3349_Mostly_uncharacterized,_incl._Von_Willebrand_factor_(vWF)_type_A_domain,_and_Bacteriocin_metabolic_process

description:
  Mostly uncharacterized, incl. Von Willebrand factor (vWF) type A domain, and Bacteriocin metabolic process


id: CL:3352
description: Mixed, incl. Tetratricopeptide repeat, and rRNA (adenine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3352_Mixed,_incl._Tetratricopeptide_repeat,_and_rRNA_(adenine)_methyltransferase_activity


id: CL:3368
description: Mixed, incl. Von Willebrand factor (vWF) type A domain, and Band 7 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3368_Mixed,_incl._Von_Willebrand_factor_(vWF)_type_A_domain,_and_Band_7_domain


id: CL:338
description: Mixed, incl. GTP binding domain, and Pseudouridine synthase, RluA-like, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:338_Mixed,_incl._GTP_binding_domain,_and_Pseudouridine_synthase,_RluA-like,_conserved_site


id: CL:3382
description: Nitrotoluene degradation, and YceI-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3382_Nitrotoluene_degradation,_and_YceI-like_domain


id: CL:3397
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3397_Mostly_uncharacterized,_incl._Domain_of_unknown_function_(DUF4870)_,_and_Phospholipase/Carboxylesterase

description:
  Mostly uncharacterized, incl. Domain of unknown function (DUF4870) , and Phospholipase/Carboxylesterase


id: CL:3399
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3399_Mixed,_incl._Domain_of_unknown_function_(DUF4870)_,_and_Positive_regulation_of_RNA_metabolic_process

description:
  Mixed, incl. Domain of unknown function (DUF4870) , and Positive regulation of RNA metabolic process


id: CL:341
description: Mixed, incl. 50S ribosomal protein L30e-like, and Pseudouridine synthase, RluA-like, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:341_Mixed,_incl._50S_ribosomal_protein_L30e-like,_and_Pseudouridine_synthase,_RluA-like,_conserved_site


id: CL:3418
description: Mixed, incl. Liposaccharide metabolic process, and Lipid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3418_Mixed,_incl._Liposaccharide_metabolic_process,_and_Lipid_transport


id: CL:3419
description: Mixed, incl. Liposaccharide metabolic process, and Lipid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3419_Mixed,_incl._Liposaccharide_metabolic_process,_and_Lipid_transport


id: CL:3420
description: Mixed, incl. Liposaccharide metabolic process, and Lipid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3420_Mixed,_incl._Liposaccharide_metabolic_process,_and_Lipid_transport


id: CL:3422
description: Liposaccharide metabolic process, and Permease LptG/LptF-related
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3422_Liposaccharide_metabolic_process,_and_Permease_LptG/LptF-related


id: CL:3424
description: Lipid A biosynthesis, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3424_Lipid_A_biosynthesis,_and_Lipopolysaccharide_biosynthesis


id: CL:343
description: Mixed, incl. Repressor, and TGS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:343_Mixed,_incl._Repressor,_and_TGS_domain


id: CL:3438
description: Lipopolysaccharide biosynthesis, and CBS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3438_Lipopolysaccharide_biosynthesis,_and_CBS_domain


id: CL:3464
description: Mixed, incl. Lipid transport, and Cell gliding
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3464_Mixed,_incl._Lipid_transport,_and_Cell_gliding


id: CL:3466
description: Phospholipid transport, and Lipid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3466_Phospholipid_transport,_and_Lipid_transport


id: CL:3480
description: Mixed, incl. 4Fe-4S dicluster domain, and Response to organic substance
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3480_Mixed,_incl._4Fe-4S_dicluster_domain,_and_Response_to_organic_substance


id: CL:3492
description: Mixed, incl. Lipid A biosynthesis, N-terminal, and Protein glycosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3492_Mixed,_incl._Lipid_A_biosynthesis,_N-terminal,_and_Protein_glycosylation


id: CL:3512
description: TPM domain, and MerR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3512_TPM_domain,_and_MerR-type_HTH_domain


id: CL:3528
description: Mostly uncharacterized, incl. Lipocalin-like domain, and Protein of unknown function DUF1328
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3528_Mostly_uncharacterized,_incl._Lipocalin-like_domain,_and_Protein_of_unknown_function_DUF1328


id: CL:3530
description: Mixed, incl. Lipocalin-like domain, and Protein of unknown function DUF1328
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3530_Mixed,_incl._Lipocalin-like_domain,_and_Protein_of_unknown_function_DUF1328


id: CL:3554
description: Peptidase M56, and Penicillinase repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3554_Peptidase_M56,_and_Penicillinase_repressor


id: CL:3569
description: Mixed, incl. Pyridoxine metabolic process, and UvrB/uvrC motif
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3569_Mixed,_incl._Pyridoxine_metabolic_process,_and_UvrB/uvrC_motif


id: CL:3571
description: Mixed, incl. Pyridoxine metabolic process, and GDSL-like Lipase/Acylhydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3571_Mixed,_incl._Pyridoxine_metabolic_process,_and_GDSL-like_Lipase/Acylhydrolase


id: CL:3599
description: Mixed, incl. Localization, and Response to antibiotic
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3599_Mixed,_incl._Localization,_and_Response_to_antibiotic


id: CL:3600
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3600_Mostly_uncharacterized,_incl._Ferritin-like,_and_Ubiquinone_and_other_terpenoid-quinone_biosynthesis

description:
  Mostly uncharacterized, incl. Ferritin-like, and Ubiquinone and other terpenoid-quinone biosynthesis


id: CL:3601
description: Mostly uncharacterized, incl. Ferritin-like, and Arm, DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3601_Mostly_uncharacterized,_incl._Ferritin-like,_and_Arm,_DNA-binding_domain


id: CL:3602
description: Mixed, incl. Ferritin-like, and Proteolipid membrane potential modulator
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3602_Mixed,_incl._Ferritin-like,_and_Proteolipid_membrane_potential_modulator


id: CL:3603
description: Mixed, incl. Ferritin-like, and Ferritin-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3603_Mixed,_incl._Ferritin-like,_and_Ferritin-like_domain


id: CL:3604
description: Mixed, incl. Ferritin-like domain, and NAD+ kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3604_Mixed,_incl._Ferritin-like_domain,_and_NAD+_kinase_activity


id: CL:3605
description: Mixed, incl. Ferritin-like domain, and NAD+ kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3605_Mixed,_incl._Ferritin-like_domain,_and_NAD+_kinase_activity


id: CL:3618
description: Mixed, incl. Ion channel, and Ferritin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3618_Mixed,_incl._Ion_channel,_and_Ferritin-like


id: CL:3632
description: Mixed, incl. Domain of unknown function DUF2383, and Surface antigen D15-like
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3632_Mixed,_incl._Domain_of_unknown_function_DUF2383,_and_Surface_antigen_D15-like


id: CL:364
description: GTP binding domain, and NAD synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:364_GTP_binding_domain,_and_NAD_synthase


id: CL:3650
description: Proteolipid membrane potential modulator, and OsmC/Ohr family
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3650_Proteolipid_membrane_potential_modulator,_and_OsmC/Ohr_family


id: CL:3659
description: Mixed, incl. Arm, DNA-binding domain, and DsrEFH-like
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3659_Mixed,_incl._Arm,_DNA-binding_domain,_and_DsrEFH-like


id: CL:3662
description: Mixed, incl. Arm, DNA-binding domain, and Helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3662_Mixed,_incl._Arm,_DNA-binding_domain,_and_Helix-turn-helix_domain


id: CL:3666
description: Mixed, incl. DNA primase activity, and Exodeoxyribonuclease V complex
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3666_Mixed,_incl._DNA_primase_activity,_and_Exodeoxyribonuclease_V_complex


id: CL:3685
description: DsrEFH-like, and 5-Nucleotidase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3685_DsrEFH-like,_and_5-Nucleotidase,_C-terminal


id: CL:3694
description: Mostly uncharacterized, incl. UspA, and DoxX family
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3694_Mostly_uncharacterized,_incl._UspA,_and_DoxX_family


id: CL:3695
description: Mixed, incl. UspA, and DoxX family
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3695_Mixed,_incl._UspA,_and_DoxX_family


id: CL:3696
description: Mixed, incl. UspA, and Kelch repeat type 1
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3696_Mixed,_incl._UspA,_and_Kelch_repeat_type_1


id: CL:3698
description: Mixed, incl. UspA, and Coenzyme F420 binding
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3698_Mixed,_incl._UspA,_and_Coenzyme_F420_binding


id: CL:3700
description: UspA, and tRNA endonuclease-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3700_UspA,_and_tRNA_endonuclease-like_domain_superfamily


id: CL:3718
description: Mixed, incl. Kelch repeat type 1, and HWE histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3718_Mixed,_incl._Kelch_repeat_type_1,_and_HWE_histidine_kinase


id: CL:3727
description: Mixed, incl. DoxX family, and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3727_Mixed,_incl._DoxX_family,_and_ABC-2_transporter


id: CL:3729
description: DoxX family, and Ribonuclease H-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3729_DoxX_family,_and_Ribonuclease_H-like_superfamily


id: CL:374
description: RNA helicase activity, and RNA-binding domain, S1
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:374_RNA_helicase_activity,_and_RNA-binding_domain,_S1


id: CL:3743
description: Mixed, incl. ABC-2 transporter, and Membrane fusion protein, biotin-lipoyl like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3743_Mixed,_incl._ABC-2_transporter,_and_Membrane_fusion_protein,_biotin-lipoyl_like_domain


id: CL:3753
description: Mixed, incl. NTF2-like domain superfamily, and NAD-dependent epimerase/dehydratase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3753_Mixed,_incl._NTF2-like_domain_superfamily,_and_NAD-dependent_epimerase/dehydratase


id: CL:376
description: RNA helicase activity, and RNA-binding domain, S1
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:376_RNA_helicase_activity,_and_RNA-binding_domain,_S1


id: CL:3769
description: Mixed, incl. beta-Lactam resistance, and MacB-like periplasmic core domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3769_Mixed,_incl._beta-Lactam_resistance,_and_MacB-like_periplasmic_core_domain


id: CL:3770
description: Mixed, incl. beta-Lactam resistance, and MacB-like periplasmic core domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3770_Mixed,_incl._beta-Lactam_resistance,_and_MacB-like_periplasmic_core_domain


id: CL:3771
description: Mixed, incl. beta-Lactam resistance, and MacB-like periplasmic core domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3771_Mixed,_incl._beta-Lactam_resistance,_and_MacB-like_periplasmic_core_domain


id: CL:3773
description: Mixed, incl. beta-Lactam resistance, and MacB-like periplasmic core domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3773_Mixed,_incl._beta-Lactam_resistance,_and_MacB-like_periplasmic_core_domain


id: CL:3774
description: Mixed, incl. beta-Lactam resistance, and MacB-like periplasmic core domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3774_Mixed,_incl._beta-Lactam_resistance,_and_MacB-like_periplasmic_core_domain


id: CL:3775
description: Mixed, incl. MacB-like periplasmic core domain, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3775_Mixed,_incl._MacB-like_periplasmic_core_domain,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:3776
description: MacB-like periplasmic core domain, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3776_MacB-like_periplasmic_core_domain,_and_MacB,_ATP-binding_domain


id: CL:3778
description: MacB-like periplasmic core domain, and Antibiotic resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3778_MacB-like_periplasmic_core_domain,_and_Antibiotic_resistance


id: CL:3800
description: Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA, and Ferric-uptake regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3800_Cation_efflux_system_CzcA/CusA/SilA/NccA/HelA/CnrA,_and_Ferric-uptake_regulator


id: CL:3816
description: beta-Lactam resistance, and Thioredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3816_beta-Lactam_resistance,_and_Thioredoxin


id: CL:3817
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3817_Mixed,_incl._Multidrug_efflux_transporter_AcrB_TolC_docking_domain,_DN/DC_subdomains,_and_Biotin-lipoyl_like

description:
  Mixed, incl. Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains, and Biotin-lipoyl like


id: CL:3818
description: Mixed, incl. Protein export membrane protein, and Biotin-lipoyl like
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3818_Mixed,_incl._Protein_export_membrane_protein,_and_Biotin-lipoyl_like


id: CL:3827
description: Mixed, incl. Thioredoxin, and MMPL family
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3827_Mixed,_incl._Thioredoxin,_and_MMPL_family


id: CL:3836
description: beta-Lactam resistance, and Cupin 2, conserved barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3836_beta-Lactam_resistance,_and_Cupin_2,_conserved_barrel


id: CL:3837
description: Mixed, incl. ABC-transporter extension domain, and MMPL family
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3837_Mixed,_incl._ABC-transporter_extension_domain,_and_MMPL_family


id: CL:3846
description: Mixed, incl. Cupin 2, conserved barrel, and DNA-binding HTH domain, TetR-type
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3846_Mixed,_incl._Cupin_2,_conserved_barrel,_and_DNA-binding_HTH_domain,_TetR-type


id: CL:3855
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3855_Mixed,_incl._Membrane_fusion_protein,_biotin-lipoyl_like_domain,_and_ABC_transporter_transmembrane_region

description:
  Mixed, incl. Membrane fusion protein, biotin-lipoyl like domain, and ABC transporter transmembrane region


id: CL:3873
description: Mixed, incl. ApbE family, and Protein glycosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3873_Mixed,_incl._ApbE_family,_and_Protein_glycosylation


id: CL:3875
description: Mixed, incl. Protein glycosylation, and Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3875_Mixed,_incl._Protein_glycosylation,_and_Cation_efflux_system_CzcA/CusA/SilA/NccA/HelA/CnrA


id: CL:3897
description: Mixed, incl. Response to heat, and Suppression of phagosomal maturation
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3897_Mixed,_incl._Response_to_heat,_and_Suppression_of_phagosomal_maturation


id: CL:3899
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3899_Mixed,_incl._cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity,_and_tRNA-specific_adenosine_deaminase

description:
  Mixed, incl. cob(I)yrinic acid a,c-diamide adenosyltransferase activity, and tRNA-specific adenosine deaminase


id: CL:3913
description: Mixed, incl. Beta-lactamase, and 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3913_Mixed,_incl._Beta-lactamase,_and_2-dehydro-3-deoxy-D-gluconate_5-dehydrogenase_activity


id: CL:3924
description: Mixed, incl. Phosphorelay signal transduction system, and Transcription regulator LuxR, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3924_Mixed,_incl._Phosphorelay_signal_transduction_system,_and_Transcription_regulator_LuxR,_C-terminal


id: CL:3925
description: Phosphorelay signal transduction system, and Transcription regulator LuxR, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3925_Phosphorelay_signal_transduction_system,_and_Transcription_regulator_LuxR,_C-terminal


id: CL:3926
description: Phosphorelay signal transduction system, and CheY-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3926_Phosphorelay_signal_transduction_system,_and_CheY-like_superfamily


id: CL:3927
description: Phosphorelay signal transduction system, and Transcription regulator LuxR, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3927_Phosphorelay_signal_transduction_system,_and_Transcription_regulator_LuxR,_C-terminal


id: CL:3929
description: Phosphorelay signal transduction system, and Sigma-54 interaction domain, ATP-binding site 2
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3929_Phosphorelay_signal_transduction_system,_and_Sigma-54_interaction_domain,_ATP-binding_site_2


id: CL:3931
description: Phosphorelay signal transduction system, and Transcription regulator LuxR, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3931_Phosphorelay_signal_transduction_system,_and_Transcription_regulator_LuxR,_C-terminal


id: CL:3933
description: Phosphorelay signal transduction system
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3933_Phosphorelay_signal_transduction_system


id: CL:3935
description: Phosphorelay signal transduction system
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3935_Phosphorelay_signal_transduction_system


id: CL:3939
description: Phosphorelay signal transduction system
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3939_Phosphorelay_signal_transduction_system


id: CL:3942
description: Phosphorelay signal transduction system
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3942_Phosphorelay_signal_transduction_system


id: CL:3944
description: Phosphorelay signal transduction system
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3944_Phosphorelay_signal_transduction_system


id: CL:3947
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3947_Signal_transduction_histidine_kinase-related_protein,_C-terminal,_and_Signal_transduction_response_regulator,_receiver_domain

description:
  Signal transduction histidine kinase-related protein, C-terminal, and Signal transduction response regulator, receiver domain


id: CL:3950
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3950_Motif_C-terminal_to_PAS_motifs_(likely_to_contribute_to_PAS_structural_domain),_and_Crp-type_HTH_domain

description:
  Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain), and Crp-type HTH domain


id: CL:3955
description: PAC motif, and Crp-like helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3955_PAC_motif,_and_Crp-like_helix-turn-helix_domain


id: CL:399
description: Mixed, incl. Chaperone, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:399_Mixed,_incl._Chaperone,_and_ATP-dependent_peptidase_activity


id: CL:3995
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:3995_Two-component_regulatory_system,_and_Signal_transduction_histidine_kinase-related_protein,_C-terminal

description:
  Two-component regulatory system, and Signal transduction histidine kinase-related protein, C-terminal


id: CL:401
description: Mixed, incl. Protein peptidyl-prolyl isomerization, and Tetratricopeptide repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:401_Mixed,_incl._Protein_peptidyl-prolyl_isomerization,_and_Tetratricopeptide_repeats


id: CL:402
description: Mixed, incl. AMP salvage, and Threonyl/alanyl tRNA synthetase, SAD
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:402_Mixed,_incl._AMP_salvage,_and_Threonyl/alanyl_tRNA_synthetase,_SAD


id: CL:4055
description: Mixed, incl. AhpD-like, and Glucose inhibited division protein A
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4055_Mixed,_incl._AhpD-like,_and_Glucose_inhibited_division_protein_A


id: CL:4069
description: Mixed, incl. SdiA-regulated, and Transmembrane protein TMEM64
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4069_Mixed,_incl._SdiA-regulated,_and_Transmembrane_protein_TMEM64


id: CL:4087
description: Mostly uncharacterized, incl. Pilus assembly, and Outer membrane protein beta-barrel domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4087_Mostly_uncharacterized,_incl._Pilus_assembly,_and_Outer_membrane_protein_beta-barrel_domain


id: CL:4090
description: Mixed, incl. Pilus assembly, and Outer membrane protein beta-barrel domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4090_Mixed,_incl._Pilus_assembly,_and_Outer_membrane_protein_beta-barrel_domain


id: CL:4109
description: Mixed, incl. Carbohydrate-binding domain, family 9, and Organelle membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4109_Mixed,_incl._Carbohydrate-binding_domain,_family_9,_and_Organelle_membrane


id: CL:4124
description: LytTR DNA-binding domain, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4124_LytTR_DNA-binding_domain,_and_Histidine_kinase


id: CL:4126
description: LytTR DNA-binding domain, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4126_LytTR_DNA-binding_domain,_and_Histidine_kinase


id: CL:4142
description: 2TM domain, and LytTR DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4142_2TM_domain,_and_LytTR_DNA-binding_domain


id: CL:4158
description: Mixed, incl. Six-bladed beta-propeller, TolB-like, and EcxA, zinc-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4158_Mixed,_incl._Six-bladed_beta-propeller,_TolB-like,_and_EcxA,_zinc-binding


id: CL:4160
description: Mixed, incl. Peptidoglycan turnover, and Solute-binding protein family 3/N-terminal domain of MltF
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4160_Mixed,_incl._Peptidoglycan_turnover,_and_Solute-binding_protein_family_3/N-terminal_domain_of_MltF


id: CL:417
description: Protein peptidyl-prolyl isomerization, and TerB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:417_Protein_peptidyl-prolyl_isomerization,_and_TerB-like


id: CL:4179
description: Mixed, incl. 23S rRNA-intervening sequence protein, and Symporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4179_Mixed,_incl._23S_rRNA-intervening_sequence_protein,_and_Symporter_activity


id: CL:4180
description: Mixed, incl. 23S rRNA-intervening sequence protein, and Horizontal gene transfer
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4180_Mixed,_incl._23S_rRNA-intervening_sequence_protein,_and_Horizontal_gene_transfer


id: CL:4181
description: Mixed, incl. 23S rRNA-intervening sequence protein, and Horizontal gene transfer
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4181_Mixed,_incl._23S_rRNA-intervening_sequence_protein,_and_Horizontal_gene_transfer


id: CL:4182
description: 23S rRNA-intervening sequence protein, and Horizontal gene transfer
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4182_23S_rRNA-intervening_sequence_protein,_and_Horizontal_gene_transfer


id: CL:4184
description: 23S rRNA-intervening sequence protein
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4184_23S_rRNA-intervening_sequence_protein


id: CL:4197
description: Horizontal gene transfer, and Subunit ChlI of Mg-chelatase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4197_Horizontal_gene_transfer,_and_Subunit_ChlI_of_Mg-chelatase


id: CL:4207
description: Mixed, incl. DNA integration, and SprB repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4207_Mixed,_incl._DNA_integration,_and_SprB_repeat


id: CL:4209
description: Mixed, incl. SprB repeat, and GDSL-like Lipase/Acylhydrolase family
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4209_Mixed,_incl._SprB_repeat,_and_GDSL-like_Lipase/Acylhydrolase_family


id: CL:4226
description: Mixed, incl. Bacterial SH3 domain, and Regulation of response to stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4226_Mixed,_incl._Bacterial_SH3_domain,_and_Regulation_of_response_to_stimulus


id: CL:4237
description: Mixed, incl. Cyclophilin-like domain superfamily, and Symporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4237_Mixed,_incl._Cyclophilin-like_domain_superfamily,_and_Symporter_activity


id: CL:4238
description: Mixed, incl. Symporter activity, and CBS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4238_Mixed,_incl._Symporter_activity,_and_CBS_domain


id: CL:4249
description: Cyclophilin-like domain superfamily, and NRAMP family
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4249_Cyclophilin-like_domain_superfamily,_and_NRAMP_family


id: CL:4258
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4258_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyl_transferases_group_1


id: CL:4259
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4259_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyl_transferases_group_1


id: CL:4260
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4260_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyl_transferases_group_1


id: CL:4261
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4261_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyl_transferases_group_1


id: CL:4262
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferase, family 1
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4262_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyl_transferase,_family_1


id: CL:4263
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferase, family 1
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4263_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyl_transferase,_family_1


id: CL:4264
description: Polyketide sugar unit biosynthesis, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4264_Polyketide_sugar_unit_biosynthesis,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:4266
description: Polyketide sugar unit biosynthesis, and UDP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4266_Polyketide_sugar_unit_biosynthesis,_and_UDP_binding_domain


id: CL:4267
description: Polyketide sugar unit biosynthesis, and UDP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4267_Polyketide_sugar_unit_biosynthesis,_and_UDP_binding_domain


id: CL:4269
description: Polyketide sugar unit biosynthesis, and UDP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4269_Polyketide_sugar_unit_biosynthesis,_and_UDP_binding_domain


id: CL:4283
description: Polyketide sugar unit biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4283_Polyketide_sugar_unit_biosynthesis


id: CL:4292
description: Mixed, incl. UDP binding domain, and Steroid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4292_Mixed,_incl._UDP_binding_domain,_and_Steroid_biosynthetic_process


id: CL:4308
description: Glycosyltransferase Family 4, and dTTP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4308_Glycosyltransferase_Family_4,_and_dTTP_biosynthetic_process


id: CL:431
description: ATP-dependent protein folding chaperone, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:431_ATP-dependent_protein_folding_chaperone,_and_ATP-dependent_peptidase_activity


id: CL:4319
description: Mixed, incl. N-acetyltransferase activity, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4319_Mixed,_incl._N-acetyltransferase_activity,_and_Glycosyl_transferase_family_2


id: CL:4321
description: Mixed, incl. Acetyltransferase (GNAT) domain, and NeuB family
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4321_Mixed,_incl._Acetyltransferase_(GNAT)_domain,_and_NeuB_family


id: CL:4324
description: Mixed, incl. NeuB family, and Polysaccharide biosynthesis protein, CapD-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4324_Mixed,_incl._NeuB_family,_and_Polysaccharide_biosynthesis_protein,_CapD-like_domain


id: CL:433
description: ATP-dependent protein folding chaperone, and Chaperone binding
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:433_ATP-dependent_protein_folding_chaperone,_and_Chaperone_binding


id: CL:4345
description: Mixed, incl. NodB homology domain, and Glycosyl transferase 4-like
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4345_Mixed,_incl._NodB_homology_domain,_and_Glycosyl_transferase_4-like


id: CL:4354
description: Mixed, incl. Extracellular polysaccharide metabolic process, and Polysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4354_Mixed,_incl._Extracellular_polysaccharide_metabolic_process,_and_Polysaccharide_transport


id: CL:4355
description: Mixed, incl. Extracellular polysaccharide metabolic process, and Polysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4355_Mixed,_incl._Extracellular_polysaccharide_metabolic_process,_and_Polysaccharide_transport


id: CL:4358
description: Polysaccharide transport, and Tyrosine kinase, G-rich domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4358_Polysaccharide_transport,_and_Tyrosine_kinase,_G-rich_domain


id: CL:4360
description: Polysaccharide transport, and Tyrosine kinase, G-rich domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4360_Polysaccharide_transport,_and_Tyrosine_kinase,_G-rich_domain


id: CL:4391
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4391_Mixed,_incl._Cytidylyltransferase,_and_Acyltransferase_activity,_acyl_groups_converted_into_alkyl_on_transfer

description:
  Mixed, incl. Cytidylyltransferase, and Acyltransferase activity, acyl groups converted into alkyl on transfer


id: CL:4409
description: Mixed, incl. Glycosyl transferases group 1, and Polysaccharide biosynthesis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4409_Mixed,_incl._Glycosyl_transferases_group_1,_and_Polysaccharide_biosynthesis_protein


id: CL:4412
description: NodB homology domain, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4412_NodB_homology_domain,_and_Glycosyl_transferases_group_1


id: CL:4428
description: Mixed, incl. GH3 family, and Peptidase M23
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4428_Mixed,_incl._GH3_family,_and_Peptidase_M23


id: CL:4437
description: Gfo/Idh/MocA-like oxidoreductase, N-terminal, and DegT/DnrJ/EryC1/StrS aminotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4437_Gfo/Idh/MocA-like_oxidoreductase,_N-terminal,_and_DegT/DnrJ/EryC1/StrS_aminotransferase


id: CL:4446
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4446_Mixed,_incl._Glycosyltransferase_2-like,_and_S-adenosyl-L-methionine-dependent_methyltransferase_superfamily

description:
  Mixed, incl. Glycosyltransferase 2-like, and S-adenosyl-L-methionine-dependent methyltransferase superfamily


id: CL:4447
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4447_Mixed,_incl._Glycosyltransferase_like_family_2,_and_S-adenosyl-L-methionine-dependent_methyltransferase_superfamily

description:
  Mixed, incl. Glycosyltransferase like family 2, and S-adenosyl-L-methionine-dependent methyltransferase superfamily


id: CL:4448
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4448_Mixed,_incl._Glycosyltransferase_2-like,_and_Glycosyltransferase_subfamily_4-like,_N-terminal_domain

description:
  Mixed, incl. Glycosyltransferase 2-like, and Glycosyltransferase subfamily 4-like, N-terminal domain


id: CL:4450
description: Mixed, incl. ABC-2 transporter, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4450_Mixed,_incl._ABC-2_transporter,_and_Glycosyl_transferase_family_2


id: CL:4464
description: Mixed, incl. Glycosyltransferase like family 2, and Galactosyltransferase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4464_Mixed,_incl._Glycosyltransferase_like_family_2,_and_Galactosyltransferase,_C-terminal


id: CL:4479
description: Mixed, incl. Methyltransferase domain, and Methyltransferase type 12
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4479_Mixed,_incl._Methyltransferase_domain,_and_Methyltransferase_type_12


id: CL:4492
description: Mostly uncharacterized, incl. TonB-dependent receptor-like, and Citrate transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4492_Mostly_uncharacterized,_incl._TonB-dependent_receptor-like,_and_Citrate_transporter


id: CL:4493
description: Mostly uncharacterized, incl. TonB-dependent receptor-like, and Citrate transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4493_Mostly_uncharacterized,_incl._TonB-dependent_receptor-like,_and_Citrate_transporter


id: CL:4495
description: Mixed, incl. TonB-dependent receptor-like, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4495_Mixed,_incl._TonB-dependent_receptor-like,_and_Methyltransferase_domain


id: CL:4498
description: Mixed, incl. Methyltransferase domain, and Putative beta-lactamase-inhibitor-like, PepSY-like
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4498_Mixed,_incl._Methyltransferase_domain,_and_Putative_beta-lactamase-inhibitor-like,_PepSY-like


id: CL:4526
description: Mixed, incl. Organelle membrane, and Regulation of secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4526_Mixed,_incl._Organelle_membrane,_and_Regulation_of_secretion


id: CL:4537
description: Mixed, incl. Porphyrin-containing compound biosynthetic process, and Quinone binding
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4537_Mixed,_incl._Porphyrin-containing_compound_biosynthetic_process,_and_Quinone_binding


id: CL:4538
description: Mixed, incl. Porphyrin-containing compound biosynthetic process, and Quinone binding
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4538_Mixed,_incl._Porphyrin-containing_compound_biosynthetic_process,_and_Quinone_binding


id: CL:4539
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4539_Mixed,_incl._Protoporphyrinogen_IX_metabolic_process,_and_Elp3/MiaA/NifB-like,_radical_SAM_core_domain

description:
  Mixed, incl. Protoporphyrinogen IX metabolic process, and Elp3/MiaA/NifB-like, radical SAM core domain


id: CL:454
description: Mixed, incl. Subtilase family, and Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:454_Mixed,_incl._Subtilase_family,_and_Structural_constituent_of_ribosome


id: CL:4540
description: Protoporphyrinogen IX metabolic process, and Anaerobic coproporphyrinogen-III oxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4540_Protoporphyrinogen_IX_metabolic_process,_and_Anaerobic_coproporphyrinogen-III_oxidase


id: CL:4541
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4541_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: CL:4550
description: Protoporphyrinogen IX metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4550_Protoporphyrinogen_IX_metabolic_process


id: CL:4561
description: Mixed, incl. Protoporphyrinogen oxidase activity, and Heme biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4561_Mixed,_incl._Protoporphyrinogen_oxidase_activity,_and_Heme_biosynthesis


id: CL:4577
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4577_Mixed,_incl._6-O-methylguanine_DNA_methyltransferase,_DNA_binding_domain,_and_CNNM,_transmembrane_domain

description:
  Mixed, incl. 6-O-methylguanine DNA methyltransferase, DNA binding domain, and CNNM, transmembrane domain


id: CL:4587
description: Mixed, incl. ResB-like domain, and Inosine triphosphate pyrophosphatase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4587_Mixed,_incl._ResB-like_domain,_and_Inosine_triphosphate_pyrophosphatase-like


id: CL:4598
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4598_Mixed,_incl._Cellular_amino_acid_catabolic_process,_and_Peptidase_S9,_prolyl_oligopeptidase,_catalytic_domain

description:
  Mixed, incl. Cellular amino acid catabolic process, and Peptidase S9, prolyl oligopeptidase, catalytic domain


id: CL:4599
description: Mixed, incl. Formate metabolic process, and Peptidase S9, prolyl oligopeptidase, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4599_Mixed,_incl._Formate_metabolic_process,_and_Peptidase_S9,_prolyl_oligopeptidase,_catalytic_domain


id: CL:4600
description: Mixed, incl. Peptidase S9, prolyl oligopeptidase, catalytic domain, and Peptidase M28
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4600_Mixed,_incl._Peptidase_S9,_prolyl_oligopeptidase,_catalytic_domain,_and_Peptidase_M28


id: CL:4601
description: Mixed, incl. Carboxypeptidase, and Dipeptidylpeptidase IV, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4601_Mixed,_incl._Carboxypeptidase,_and_Dipeptidylpeptidase_IV,_N-terminal_domain


id: CL:4602
description: Mixed, incl. Cof family, and Ribbon-helix-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4602_Mixed,_incl._Cof_family,_and_Ribbon-helix-helix


id: CL:4604
description: Mixed, incl. Cof family, and Ribbon-helix-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4604_Mixed,_incl._Cof_family,_and_Ribbon-helix-helix


id: CL:4622
description: Mixed, incl. Dipeptidylpeptidase IV, N-terminal domain, and Carboxypeptidase Q
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4622_Mixed,_incl._Dipeptidylpeptidase_IV,_N-terminal_domain,_and_Carboxypeptidase_Q


id: CL:4641
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4641_Mixed,_incl._Peptidase_S9,_prolyl_oligopeptidase,_catalytic_domain,_and_Alkylhydroperoxidase_AhpD_core

description:
  Mixed, incl. Peptidase S9, prolyl oligopeptidase, catalytic domain, and Alkylhydroperoxidase AhpD core


id: CL:4643
description: Mixed, incl. Peptidase S9, serine active site, and Peptidase M28 family
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4643_Mixed,_incl._Peptidase_S9,_serine_active_site,_and_Peptidase_M28_family


id: CL:466
description: Mixed, incl. Rhodanese-like domain, and tRNA pseudouridine synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:466_Mixed,_incl._Rhodanese-like_domain,_and_tRNA_pseudouridine_synthase


id: CL:4669
description: Mixed, incl. Formate metabolic process, and CoA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4669_Mixed,_incl._Formate_metabolic_process,_and_CoA-binding


id: CL:4670
description: Formate metabolic process, and Lactone catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4670_Formate_metabolic_process,_and_Lactone_catabolic_process


id: CL:4673
description: Histidine metabolism, and Aromatic amino acid lyase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4673_Histidine_metabolism,_and_Aromatic_amino_acid_lyase


id: CL:468
description: Rhodanese-like domain, and Superoxide dismutase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:468_Rhodanese-like_domain,_and_Superoxide_dismutase_activity


id: CL:4694
description: Imidazolonepropionase activity, and Peptidase M48
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4694_Imidazolonepropionase_activity,_and_Peptidase_M48


id: CL:4707
description: Mixed, incl. Aromatic amino acid family catabolic process, and Dioxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4707_Mixed,_incl._Aromatic_amino_acid_family_catabolic_process,_and_Dioxygenase


id: CL:4708
description: Mixed, incl. Aromatic amino acid family catabolic process, and Dioxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4708_Mixed,_incl._Aromatic_amino_acid_family_catabolic_process,_and_Dioxygenase


id: CL:4724
description: Styrene degradation, and Polyol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4724_Styrene_degradation,_and_Polyol_metabolic_process


id: CL:4733
description: Mixed, incl. Protein of unknown function DUF4230, and DNA mismatch repair MutS family
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4733_Mixed,_incl._Protein_of_unknown_function_DUF4230,_and_DNA_mismatch_repair_MutS_family


id: CL:4751
description: Mixed, incl. Carbohydrate metabolic process, and Tetratricopeptide-like helical domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4751_Mixed,_incl._Carbohydrate_metabolic_process,_and_Tetratricopeptide-like_helical_domain_superfamily


id: CL:4752
description: Mixed, incl. Carbohydrate metabolic process, and Tetratricopeptide-like helical domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4752_Mixed,_incl._Carbohydrate_metabolic_process,_and_Tetratricopeptide-like_helical_domain_superfamily


id: CL:4753
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4753_Mixed,_incl._TonB-dependent_outer_membrane_protein,_SusC/RagA,_and_Tetratricopeptide-like_helical_domain_superfamily

description:
  Mixed, incl. TonB-dependent outer membrane protein, SusC/RagA, and Tetratricopeptide-like helical domain superfamily


id: CL:4754
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4754_Mixed,_incl._TonB-dependent_outer_membrane_protein,_SusC/RagA,_and_Tetratricopeptide-like_helical_domain_superfamily

description:
  Mixed, incl. TonB-dependent outer membrane protein, SusC/RagA, and Tetratricopeptide-like helical domain superfamily


id: CL:4755
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4755_Mixed,_incl._TonB-dependent_outer_membrane_protein,_SusC/RagA,_and_Tetratricopeptide-like_helical_domain_superfamily

description:
  Mixed, incl. TonB-dependent outer membrane protein, SusC/RagA, and Tetratricopeptide-like helical domain superfamily


id: CL:4756
description: Mixed, incl. Sulfatase, N-terminal, and Other glycan degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4756_Mixed,_incl._Sulfatase,_N-terminal,_and_Other_glycan_degradation


id: CL:4757
description: Mixed, incl. 3-keto-disaccharide hydrolase, and Sulfatase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4757_Mixed,_incl._3-keto-disaccharide_hydrolase,_and_Sulfatase,_N-terminal


id: CL:4758
description: Mixed, incl. Sulfatase, N-terminal, and Sialidase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4758_Mixed,_incl._Sulfatase,_N-terminal,_and_Sialidase


id: CL:4759
description: Mixed, incl. SGNH hydrolase superfamily, and DapA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4759_Mixed,_incl._SGNH_hydrolase_superfamily,_and_DapA-like


id: CL:4760
description: Mixed, incl. SGNH hydrolase superfamily, and Kelch repeat type 1
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4760_Mixed,_incl._SGNH_hydrolase_superfamily,_and_Kelch_repeat_type_1


id: CL:4775
description: Mixed, incl. DapA-like, and Fluorobenzoate degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4775_Mixed,_incl._DapA-like,_and_Fluorobenzoate_degradation


id: CL:4799
description: Mixed, incl. 3-keto-disaccharide hydrolase, and Gfo/Idh/MocA-like oxidoreductase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4799_Mixed,_incl._3-keto-disaccharide_hydrolase,_and_Gfo/Idh/MocA-like_oxidoreductase,_N-terminal


id: CL:4800
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4800_3-keto-disaccharide_hydrolase,_and_Twin-arginine_translocation_pathway,_signal_sequence,_bacterial/archaeal

description:
  3-keto-disaccharide hydrolase, and Twin-arginine translocation pathway, signal sequence, bacterial/archaeal


id: CL:4801
description: 3-keto-disaccharide hydrolase, and GMC oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4801_3-keto-disaccharide_hydrolase,_and_GMC_oxidoreductase


id: CL:4810
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4810_3-keto-disaccharide_hydrolase,_and_Twin-arginine_translocation_pathway,_signal_sequence,_bacterial/archaeal

description:
  3-keto-disaccharide hydrolase, and Twin-arginine translocation pathway, signal sequence, bacterial/archaeal


id: CL:4820
description: Xylose isomerase-like TIM barrel, and Gfo/Idh/MocA-like oxidoreductase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4820_Xylose_isomerase-like_TIM_barrel,_and_Gfo/Idh/MocA-like_oxidoreductase,_C-terminal


id: CL:4833
description: Mixed, incl. Vacuole, and Phenol-containing compound catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4833_Mixed,_incl._Vacuole,_and_Phenol-containing_compound_catabolic_process


id: CL:4834
description: Mixed, incl. Phenol-containing compound catabolic process, and SAF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4834_Mixed,_incl._Phenol-containing_compound_catabolic_process,_and_SAF_domain


id: CL:4847
description: Vacuole, and Six-hairpin glycosidase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4847_Vacuole,_and_Six-hairpin_glycosidase-like_superfamily


id: CL:4857
description: Mixed, incl. TonB-dependent outer membrane protein, SusC/RagA, and SusD-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4857_Mixed,_incl._TonB-dependent_outer_membrane_protein,_SusC/RagA,_and_SusD-like,_N-terminal


id: CL:4858
description: TonB-dependent outer membrane protein, SusC/RagA, and SusD-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4858_TonB-dependent_outer_membrane_protein,_SusC/RagA,_and_SusD-like,_N-terminal


id: CL:4859
description: TonB-dependent outer membrane protein, SusC/RagA, and SusD-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4859_TonB-dependent_outer_membrane_protein,_SusC/RagA,_and_SusD-like,_N-terminal


id: CL:4860
description: TonB-dependent outer membrane protein, SusC/RagA, and SusD-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4860_TonB-dependent_outer_membrane_protein,_SusC/RagA,_and_SusD-like,_N-terminal


id: CL:4861
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4861_TonB-dependent_outer_membrane_protein,_SusC/RagA,_and_Starch-binding_associating_with_outer_membrane

description:
  TonB-dependent outer membrane protein, SusC/RagA, and Starch-binding associating with outer membrane


id: CL:4863
description: Mixed, incl. Peptidase M60-like family, and Susd and RagB outer membrane lipoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4863_Mixed,_incl._Peptidase_M60-like_family,_and_Susd_and_RagB_outer_membrane_lipoprotein


id: CL:4884
description: Mixed, incl. Starch binding, and ATPase-coupled ion transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4884_Mixed,_incl._Starch_binding,_and_ATPase-coupled_ion_transmembrane_transporter_activity


id: CL:4895
description: FecR protein, and RNA polymerase sigma-70, Bacteroidetes type
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4895_FecR_protein,_and_RNA_polymerase_sigma-70,_Bacteroidetes_type


id: CL:4905
description: Mixed, incl. Starch-binding associating with outer membrane, and Vitamin transport
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4905_Mixed,_incl._Starch-binding_associating_with_outer_membrane,_and_Vitamin_transport


id: CL:491
description: Catalytic activity, acting on DNA, and Nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:491_Catalytic_activity,_acting_on_DNA,_and_Nucleoid


id: CL:4920
description: Mixed, incl. Glycosyl hydrolase family 92, and Fn3 associated
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4920_Mixed,_incl._Glycosyl_hydrolase_family_92,_and_Fn3_associated


id: CL:4923
description: Mixed, incl. Mannoside phosphorylase, and Glycosyl hydrolase-like 10
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4923_Mixed,_incl._Mannoside_phosphorylase,_and_Glycosyl_hydrolase-like_10


id: CL:493
description: Catalytic activity, acting on DNA, and Nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:493_Catalytic_activity,_acting_on_DNA,_and_Nucleoid


id: CL:4944
description: Mixed, incl. Sphingolipid metabolism, and Domain of unknown function DUF5107
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4944_Mixed,_incl._Sphingolipid_metabolism,_and_Domain_of_unknown_function_DUF5107


id: CL:4946
description: Mixed, incl. Beta-galactosidase complex, and Transcription regulator HTH-like
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4946_Mixed,_incl._Beta-galactosidase_complex,_and_Transcription_regulator_HTH-like


id: CL:495
description: DNA replication, and DNA damage sensor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:495_DNA_replication,_and_DNA_damage_sensor_activity


id: CL:4960
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4960_Mixed,_incl._Domain_of_unknown_function_(DUF4976),_and_Starch-binding_associating_with_outer_membrane

description:
  Mixed, incl. Domain of unknown function (DUF4976), and Starch-binding associating with outer membrane


id: CL:4969
description: Mixed, incl. Carboxypeptidase, and Ami_2
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4969_Mixed,_incl._Carboxypeptidase,_and_Ami_2


id: CL:497
description: ATP-dependent activity, acting on DNA, and DNA-directed DNA polymerase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:497_ATP-dependent_activity,_acting_on_DNA,_and_DNA-directed_DNA_polymerase


id: CL:4992
description: Mixed, incl. Hydrolase activity, hydrolyzing O-glycosyl compounds, and Glucan metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4992_Mixed,_incl._Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds,_and_Glucan_metabolic_process


id: CL:4993
description: Starch and sucrose metabolism, and Starch binding
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4993_Starch_and_sucrose_metabolism,_and_Starch_binding


id: CL:4995
description: Glucan metabolic process, and Starch and sucrose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4995_Glucan_metabolic_process,_and_Starch_and_sucrose_metabolism


id: CL:4997
description: Glycosyl hydrolase, all-beta, and Six-hairpin glycosidase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4997_Glycosyl_hydrolase,_all-beta,_and_Six-hairpin_glycosidase-like_superfamily


id: CL:4999
description: Glycosyl hydrolase, family 13, catalytic domain, and Glycoside hydrolase family 31
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:4999_Glycosyl_hydrolase,_family_13,_catalytic_domain,_and_Glycoside_hydrolase_family_31


id: CL:500
description: Mixed, incl. RecQ zinc-binding, and DNA-directed DNA polymerase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:500_Mixed,_incl._RecQ_zinc-binding,_and_DNA-directed_DNA_polymerase


id: CL:502
description: DNA-directed DNA polymerase, and RQC domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:502_DNA-directed_DNA_polymerase,_and_RQC_domain


id: CL:5023
description: Starch binding, and LacI-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5023_Starch_binding,_and_LacI-type_HTH_domain


id: CL:5042
description: Hydrolase activity, hydrolyzing O-glycosyl compounds, and Amino sugar metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5042_Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds,_and_Amino_sugar_metabolic_process


id: CL:5043
description: Mixed, incl. Glycoside hydrolase family 16, and Beta-hexosaminidase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5043_Mixed,_incl._Glycoside_hydrolase_family_16,_and_Beta-hexosaminidase


id: CL:5044
description: Mixed, incl. Glycoside hydrolase family 16, and Beta-hexosaminidase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5044_Mixed,_incl._Glycoside_hydrolase_family_16,_and_Beta-hexosaminidase


id: CL:5047
description: PKD domain superfamily, and Y_Y_Y domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5047_PKD_domain_superfamily,_and_Y_Y_Y_domain


id: CL:5069
description: Mixed, incl. Chitin binding, and Peroxiredoxin, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5069_Mixed,_incl._Chitin_binding,_and_Peroxiredoxin,_C-terminal


id: CL:5079
description: Glycoside hydrolase, family 3, N-terminal, and Amino sugar metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5079_Glycoside_hydrolase,_family_3,_N-terminal,_and_Amino_sugar_metabolic_process


id: CL:5091
description: Mixed, incl. Galactose metabolism, and Dipeptidyl-peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5091_Mixed,_incl._Galactose_metabolism,_and_Dipeptidyl-peptidase_activity


id: CL:5095
description: Galactose metabolic process, and Glycosyl hydrolases family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5095_Galactose_metabolic_process,_and_Glycosyl_hydrolases_family_2


id: CL:5113
description: Mixed, incl. Dipeptidyl-peptidase activity, and Protein of unknown function DUF885
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5113_Mixed,_incl._Dipeptidyl-peptidase_activity,_and_Protein_of_unknown_function_DUF885


id: CL:5124
description: Mostly uncharacterized, incl. Monooxygenase activity, and TonB-dependent receptor-like
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5124_Mostly_uncharacterized,_incl._Monooxygenase_activity,_and_TonB-dependent_receptor-like


id: CL:5125
description: Mostly uncharacterized, incl. TonB-dependent receptor-like, and Peptidase M3A/M3B
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5125_Mostly_uncharacterized,_incl._TonB-dependent_receptor-like,_and_Peptidase_M3A/M3B


id: CL:5126
description: Mostly uncharacterized, incl. TonB-dependent receptor-like, and Peptidase M3A/M3B
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5126_Mostly_uncharacterized,_incl._TonB-dependent_receptor-like,_and_Peptidase_M3A/M3B


id: CL:5128
description: Mixed, incl. Nitrous oxide reductase, N-terminal, and Outer membrane protein beta-barrel domain 3
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5128_Mixed,_incl._Nitrous_oxide_reductase,_N-terminal,_and_Outer_membrane_protein_beta-barrel_domain_3


id: CL:5143
description: Mixed, incl. Spermidine metabolic process, and Methyltransferase type 11
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5143_Mixed,_incl._Spermidine_metabolic_process,_and_Methyltransferase_type_11


id: CL:5159
description: Mixed, incl. Ferrous iron transporter FeoA domain, and Zinc/iron permease
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5159_Mixed,_incl._Ferrous_iron_transporter_FeoA_domain,_and_Zinc/iron_permease


id: CL:5171
description: Cell death, and Cation efflux family
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5171_Cell_death,_and_Cation_efflux_family


id: CL:5187
description: Mixed, incl. Homeobox-like domain superfamily, and ABC transporters
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5187_Mixed,_incl._Homeobox-like_domain_superfamily,_and_ABC_transporters


id: CL:5188
description: Mixed, incl. ABC transporters, and Antibiotic metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5188_Mixed,_incl._ABC_transporters,_and_Antibiotic_metabolic_process


id: CL:5189
description: Mixed, incl. Periplasmic binding protein, and ABC transporters
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5189_Mixed,_incl._Periplasmic_binding_protein,_and_ABC_transporters


id: CL:5191
description: Mixed, incl. Bacteriocin metabolic process, and Iron ion homeostasis
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5191_Mixed,_incl._Bacteriocin_metabolic_process,_and_Iron_ion_homeostasis


id: CL:5213
description: Mixed, incl. Periplasmic binding protein, and Nucleoside recognition
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5213_Mixed,_incl._Periplasmic_binding_protein,_and_Nucleoside_recognition


id: CL:5227
description: Mixed, incl. Beta-lactamase, class-A, and Protein of unknown function DUF4249
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5227_Mixed,_incl._Beta-lactamase,_class-A,_and_Protein_of_unknown_function_DUF4249


id: CL:5229
description: Mixed, incl. Protein of unknown function DUF4249, and TonB-dependent receptor-like
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5229_Mixed,_incl._Protein_of_unknown_function_DUF4249,_and_TonB-dependent_receptor-like


id: CL:5252
description: Mixed, incl. DNA binding HTH domain, AraC-type, and Cupin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5252_Mixed,_incl._DNA_binding_HTH_domain,_AraC-type,_and_Cupin_domain


id: CL:5254
description: DNA binding HTH domain, AraC-type, and LysR, substrate-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5254_DNA_binding_HTH_domain,_AraC-type,_and_LysR,_substrate-binding


id: CL:5285
description: Mixed, incl. Potassium ion transport, and Universal stress protein A family
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5285_Mixed,_incl._Potassium_ion_transport,_and_Universal_stress_protein_A_family


id: CL:5286
description: Mixed, incl. Potassium ion transport, and Universal stress protein A family
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5286_Mixed,_incl._Potassium_ion_transport,_and_Universal_stress_protein_A_family


id: CL:5288
description: Mixed, incl. Potassium ion transport, and Calcium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5288_Mixed,_incl._Potassium_ion_transport,_and_Calcium_ion_transport


id: CL:5289
description: Mixed, incl. TrkA-N domain, and Ion channel
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5289_Mixed,_incl._TrkA-N_domain,_and_Ion_channel


id: CL:5291
description: Antiport, and Large-conductance mechanosensitive channel
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5291_Antiport,_and_Large-conductance_mechanosensitive_channel


id: CL:5312
description: Mixed, incl. RNA 3-end processing, and Calcium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5312_Mixed,_incl._RNA_3-end_processing,_and_Calcium_ion_transport


id: CL:5328
description: Universal stress protein A family, and Peptidase family M1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5328_Universal_stress_protein_A_family,_and_Peptidase_family_M1_domain


id: CL:5338
description: Mixed, incl. RimK-like ATP-grasp domain, and Succinylglutamate desuccinylase/aspartoacylase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5338_Mixed,_incl._RimK-like_ATP-grasp_domain,_and_Succinylglutamate_desuccinylase/aspartoacylase


id: CL:535
description: DNA polymerase complex, and PHP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:535_DNA_polymerase_complex,_and_PHP_domain


id: CL:5357
description: Mixed, incl. Transmembrane helix, and Ubiquinone and other terpenoid-quinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5357_Mixed,_incl._Transmembrane_helix,_and_Ubiquinone_and_other_terpenoid-quinone_biosynthesis


id: CL:5358
description: Mixed, incl. Transmembrane helix, and Aldo-keto reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5358_Mixed,_incl._Transmembrane_helix,_and_Aldo-keto_reductase


id: CL:5359
description: Mostly uncharacterized, incl. Aldo-keto reductase, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5359_Mostly_uncharacterized,_incl._Aldo-keto_reductase,_and_Sporulation


id: CL:5360
description: Mostly uncharacterized, incl. Sporulation, and Von Willebrand factor (vWF) type A domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5360_Mostly_uncharacterized,_incl._Sporulation,_and_Von_Willebrand_factor_(vWF)_type_A_domain


id: CL:5361
description: Mostly uncharacterized, incl. SdiA-regulated, and RNA methyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5361_Mostly_uncharacterized,_incl._SdiA-regulated,_and_RNA_methyltransferase


id: CL:5362
description: Mostly uncharacterized, incl. SdiA-regulated, and RNA methyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5362_Mostly_uncharacterized,_incl._SdiA-regulated,_and_RNA_methyltransferase


id: CL:5363
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5363_Mostly_uncharacterized,_incl._Domain_of_unknown_function_DUF1232,_and_Mycobacterial_4_TMS_phage_holin,_superfamily_IV

description:
  Mostly uncharacterized, incl. Domain of unknown function DUF1232, and Mycobacterial 4 TMS phage holin, superfamily IV


id: CL:5366
description: Mixed, incl. Mycobacterial 4 TMS phage holin, superfamily IV, and RNA polymerase binding
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5366_Mixed,_incl._Mycobacterial_4_TMS_phage_holin,_superfamily_IV,_and_RNA_polymerase_binding


id: CL:5386
description: Mixed, incl. SdiA-regulated, and RNA methyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5386_Mixed,_incl._SdiA-regulated,_and_RNA_methyltransferase


id: CL:5397
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5397_Mixed,_incl._Phosphoric_diester_hydrolase_activity,_and_Pyridine_nucleotide-disulphide_oxidoreductase

description:
  Mixed, incl. Phosphoric diester hydrolase activity, and Pyridine nucleotide-disulphide oxidoreductase


id: CL:5408
description: Mostly uncharacterized, incl. Von Willebrand factor (vWF) type A domain, and RDD family
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5408_Mostly_uncharacterized,_incl._Von_Willebrand_factor_(vWF)_type_A_domain,_and_RDD_family


id: CL:5409
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5409_Mostly_uncharacterized,_incl._Domain_of_unknown_function_DUF4136,_and_Phosphatidic_acid_phosphatase_type_2/haloperoxidase

description:
  Mostly uncharacterized, incl. Domain of unknown function DUF4136, and Phosphatidic acid phosphatase type 2/haloperoxidase


id: CL:5412
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5412_Mixed,_incl._Domain_of_unknown_function_DUF4136,_and_Phosphatidic_acid_phosphatase_type_2/haloperoxidase

description:
  Mixed, incl. Domain of unknown function DUF4136, and Phosphatidic acid phosphatase type 2/haloperoxidase


id: CL:5437
description: Mixed, incl. Domain of unknown function DUF58, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5437_Mixed,_incl._Domain_of_unknown_function_DUF58,_and_Sporulation


id: CL:5451
description: Mixed, incl. Aldo-keto reductase, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5451_Mixed,_incl._Aldo-keto_reductase,_and_Tetratricopeptide_repeat


id: CL:5452
description: Mixed, incl. Tetratricopeptide repeat, and TT1751-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5452_Mixed,_incl._Tetratricopeptide_repeat,_and_TT1751-like_domain_superfamily


id: CL:5465
description: Mixed, incl. Aldo-keto reductase, and HxlR-like helix-turn-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5465_Mixed,_incl._Aldo-keto_reductase,_and_HxlR-like_helix-turn-helix


id: CL:547
description: Primosome, and Single-stranded DNA-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:547_Primosome,_and_Single-stranded_DNA-binding_protein


id: CL:5477
description: Mixed, incl. Bacterial PH domain, and Regulation of secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5477_Mixed,_incl._Bacterial_PH_domain,_and_Regulation_of_secretion


id: CL:5478
description: Mixed, incl. BCCT transporter family, and Elongation factor G C-terminus
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5478_Mixed,_incl._BCCT_transporter_family,_and_Elongation_factor_G_C-terminus


id: CL:5493
description: Bacterial PH domain, and Regulation of secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5493_Bacterial_PH_domain,_and_Regulation_of_secretion


id: CL:5507
description: Mostly uncharacterized, incl. NAD(P)-binding domain, and Gcn5-related N-acetyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5507_Mostly_uncharacterized,_incl._NAD(P)-binding_domain,_and_Gcn5-related_N-acetyltransferase


id: CL:5508
description: Mixed, incl. Gcn5-related N-acetyltransferase, and NAD(P)-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5508_Mixed,_incl._Gcn5-related_N-acetyltransferase,_and_NAD(P)-binding_domain


id: CL:5509
description: Mostly uncharacterized, incl. YCII-related, and NAD(P)H-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5509_Mostly_uncharacterized,_incl._YCII-related,_and_NAD(P)H-binding


id: CL:5510
description: Mixed, incl. RimK-like ATP-grasp domain, and Arginine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5510_Mixed,_incl._RimK-like_ATP-grasp_domain,_and_Arginine_catabolic_process


id: CL:5521
description: Mixed, incl. YCII-related, and NAD(P)H-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5521_Mixed,_incl._YCII-related,_and_NAD(P)H-binding


id: CL:5531
description: Mixed, incl. Gcn5-related N-acetyltransferase, and Aminotransferase class IV
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5531_Mixed,_incl._Gcn5-related_N-acetyltransferase,_and_Aminotransferase_class_IV


id: CL:5545
description: Mixed, incl. NmrA-like family, and Zinc-binding dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5545_Mixed,_incl._NmrA-like_family,_and_Zinc-binding_dehydrogenase


id: CL:5548
description: Mixed, incl. Zinc-binding dehydrogenase, and NmrA-like family
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5548_Mixed,_incl._Zinc-binding_dehydrogenase,_and_NmrA-like_family


id: CL:5567
description: Mixed, incl. NmrA-like family, and Amine oxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5567_Mixed,_incl._NmrA-like_family,_and_Amine_oxidase


id: CL:5576
description: Mixed, incl. ArsC family, and Sulphur transport
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5576_Mixed,_incl._ArsC_family,_and_Sulphur_transport


id: CL:5577
description: Mixed, incl. ArsC family, and DSBA-like thioredoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5577_Mixed,_incl._ArsC_family,_and_DSBA-like_thioredoxin_domain


id: CL:558
description: Nucleotide-excision repair, and Holliday junction helicase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:558_Nucleotide-excision_repair,_and_Holliday_junction_helicase_complex


id: CL:5592
description: Mixed, incl. Sulphur transport, and Crp-like helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5592_Mixed,_incl._Sulphur_transport,_and_Crp-like_helix-turn-helix_domain


id: CL:5603
description: Mostly uncharacterized, incl. DNA ligase activity, and LOG family
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5603_Mostly_uncharacterized,_incl._DNA_ligase_activity,_and_LOG_family


id: CL:5605
description: Mixed, incl. DNA ligase (ATP) activity, and Double-strand break repair
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5605_Mixed,_incl._DNA_ligase_(ATP)_activity,_and_Double-strand_break_repair


id: CL:5606
description: Mixed, incl. DNA ligase (ATP) activity, and Calcineurin-like phosphoesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5606_Mixed,_incl._DNA_ligase_(ATP)_activity,_and_Calcineurin-like_phosphoesterase


id: CL:5615
description: Non-homologous end-joining, and Phosphatidate phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5615_Non-homologous_end-joining,_and_Phosphatidate_phosphatase_activity


id: CL:5629
description: Mixed, incl. LOG family, and Helix-hairpin-helix DNA-binding motif, class 1
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5629_Mixed,_incl._LOG_family,_and_Helix-hairpin-helix_DNA-binding_motif,_class_1


id: CL:5631
description: Mixed, incl. LOG family, and Helix-hairpin-helix DNA-binding motif, class 1
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5631_Mixed,_incl._LOG_family,_and_Helix-hairpin-helix_DNA-binding_motif,_class_1


id: CL:5648
description: Mixed, incl. Peptidase S9A, N-terminal domain, and tRNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5648_Mixed,_incl._Peptidase_S9A,_N-terminal_domain,_and_tRNA-binding_domain


id: CL:5657
description: Mixed, incl. Acyl-CoA N-acyltransferase, and Flavin reductase like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5657_Mixed,_incl._Acyl-CoA_N-acyltransferase,_and_Flavin_reductase_like_domain


id: CL:5658
description: Mixed, incl. Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily, and FAS1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5658_Mixed,_incl._Cryptochrome/DNA_photolyase,_FAD-binding_domain-like_superfamily,_and_FAS1_domain


id: CL:5661
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5661_Mixed,_incl._Cryptochrome/DNA_photolyase,_FAD-binding_domain-like_superfamily,_and_Protein_kinase_domain

description:
  Mixed, incl. Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily, and Protein kinase domain


id: CL:5676
description: FAS1 domain, and Lipocalin-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5676_FAS1_domain,_and_Lipocalin-like_domain


id: CL:5685
description: Mixed, incl. Acyl-CoA N-acyltransferase, and Citrate transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5685_Mixed,_incl._Acyl-CoA_N-acyltransferase,_and_Citrate_transporter


id: CL:5687
description: Mixed, incl. Flavin reductase like domain, and Uracil DNA N-glycosylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5687_Mixed,_incl._Flavin_reductase_like_domain,_and_Uracil_DNA_N-glycosylase_activity


id: CL:570
description: Holliday junction helicase complex, and Bacterial nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:570_Holliday_junction_helicase_complex,_and_Bacterial_nucleoid


id: CL:5701
description: Methyltransferase type 12, and Acetyltransferase (GNAT) family
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5701_Methyltransferase_type_12,_and_Acetyltransferase_(GNAT)_family


id: CL:5710
description: Mostly uncharacterized, incl. DNA integration, and Glycoside-hydrolase family GH114
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5710_Mostly_uncharacterized,_incl._DNA_integration,_and_Glycoside-hydrolase_family_GH114


id: CL:5712
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5712_Mostly_uncharacterized,_incl._Glycoside-hydrolase_family_GH114,_and_Pyridine_nucleotide-disulphide_oxidoreductase

description:
  Mostly uncharacterized, incl. Glycoside-hydrolase family GH114, and Pyridine nucleotide-disulphide oxidoreductase


id: CL:5713
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5713_Mostly_uncharacterized,_incl._Glycoside-hydrolase_family_GH114,_and_Pyridine_nucleotide-disulphide_oxidoreductase

description:
  Mostly uncharacterized, incl. Glycoside-hydrolase family GH114, and Pyridine nucleotide-disulphide oxidoreductase


id: CL:5714
description: Mixed, incl. Pyridine nucleotide-disulphide oxidoreductase, and Sulfur relay system
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5714_Mixed,_incl._Pyridine_nucleotide-disulphide_oxidoreductase,_and_Sulfur_relay_system


id: CL:5716
description: DNA integration, and Helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5716_DNA_integration,_and_Helix-turn-helix_domain


id: CL:5728
description: Mixed, incl. Pyridine nucleotide-disulphide oxidoreductase, and DsrE/DsrF-like family
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5728_Mixed,_incl._Pyridine_nucleotide-disulphide_oxidoreductase,_and_DsrE/DsrF-like_family


id: CL:5739
description: Mixed, incl. Glycoside-hydrolase family GH114, and Phenylacetic acid degradation-related domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5739_Mixed,_incl._Glycoside-hydrolase_family_GH114,_and_Phenylacetic_acid_degradation-related_domain


id: CL:5741
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5741_Mixed,_incl._Glycoside-hydrolase_family_GH114,_and_Glycoside_hydrolase/deacetylase,_beta/alpha-barrel

description:
  Mixed, incl. Glycoside-hydrolase family GH114, and Glycoside hydrolase/deacetylase, beta/alpha-barrel


id: CL:5760
description: Mixed, incl. EF-Hand 1, calcium-binding site, and Response to oxygen-containing compound
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5760_Mixed,_incl._EF-Hand_1,_calcium-binding_site,_and_Response_to_oxygen-containing_compound


id: CL:5776
description: Mostly uncharacterized, incl. RDD family, and AAA domain, group 15
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5776_Mostly_uncharacterized,_incl._RDD_family,_and_AAA_domain,_group_15


id: CL:5778
description: Mixed, incl. AAA domain, group 15, and Zinc/iron permease
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5778_Mixed,_incl._AAA_domain,_group_15,_and_Zinc/iron_permease


id: CL:5794
description: Mixed, incl. Beta-lactamase, and Restriction endonuclease type II-like
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5794_Mixed,_incl._Beta-lactamase,_and_Restriction_endonuclease_type_II-like


id: CL:5805
description: Sodium, and Protein of unknown function DUF368
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5805_Sodium,_and_Protein_of_unknown_function_DUF368


id: CL:581
description: DNA topoisomerase, type IIA-like domain superfamily, and Large-conductance mechanosensitive channel
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:581_DNA_topoisomerase,_type_IIA-like_domain_superfamily,_and_Large-conductance_mechanosensitive_channel


id: CL:5828
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5828_Mostly_uncharacterized,_incl._Defense_response,_and_Lambda_repressor-like,_DNA-binding_domain_superfamily

description:
  Mostly uncharacterized, incl. Defense response, and Lambda repressor-like, DNA-binding domain superfamily


id: CL:5829
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5829_Mostly_uncharacterized,_incl._Defense_response,_and_Lambda_repressor-like,_DNA-binding_domain_superfamily

description:
  Mostly uncharacterized, incl. Defense response, and Lambda repressor-like, DNA-binding domain superfamily


id: CL:5830
description: Mostly uncharacterized, incl. Defense response, and Nickel cation binding
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5830_Mostly_uncharacterized,_incl._Defense_response,_and_Nickel_cation_binding


id: CL:5831
description: Mixed, incl. Defense response, and Lambda repressor-like, DNA-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5831_Mixed,_incl._Defense_response,_and_Lambda_repressor-like,_DNA-binding_domain_superfamily


id: CL:5832
description: Mixed, incl. DNA modification, and ATP hydrolysis activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5832_Mixed,_incl._DNA_modification,_and_ATP_hydrolysis_activity


id: CL:5833
description: Mixed, incl. DNA modification, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5833_Mixed,_incl._DNA_modification,_and_AAA_domain


id: CL:5835
description: Mixed, incl. DNA modification, and Chromosome segregation
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5835_Mixed,_incl._DNA_modification,_and_Chromosome_segregation


id: CL:5861
description: Mixed, incl. AAA domain, and DNA translocase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5861_Mixed,_incl._AAA_domain,_and_DNA_translocase_activity


id: CL:5874
description: Mixed, incl. DNA modification, and Double-strand break repair
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5874_Mixed,_incl._DNA_modification,_and_Double-strand_break_repair


id: CL:5875
description: Mixed, incl. DNA modification, and Double-strand break repair
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5875_Mixed,_incl._DNA_modification,_and_Double-strand_break_repair


id: CL:5878
description: Mixed, incl. DNA modification, and Lysine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5878_Mixed,_incl._DNA_modification,_and_Lysine_biosynthesis


id: CL:59
description: Mixed, incl. Translation, and ATP-dependent activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:59_Mixed,_incl._Translation,_and_ATP-dependent_activity


id: CL:5902
description: Mixed, incl. Carboxylic ester hydrolase activity, and Homologous recombination
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5902_Mixed,_incl._Carboxylic_ester_hydrolase_activity,_and_Homologous_recombination


id: CL:5913
description: Mixed, incl. Maintenance of DNA repeat elements, and Fido domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5913_Mixed,_incl._Maintenance_of_DNA_repeat_elements,_and_Fido_domain


id: CL:5915
description: Mixed, incl. Maintenance of DNA repeat elements, and HipA-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5915_Mixed,_incl._Maintenance_of_DNA_repeat_elements,_and_HipA-like,_C-terminal


id: CL:5916
description: Maintenance of DNA repeat elements, and HipA-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5916_Maintenance_of_DNA_repeat_elements,_and_HipA-like,_C-terminal


id: CL:5929
description: Mixed, incl. HipA-like, C-terminal, and HipA N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5929_Mixed,_incl._HipA-like,_C-terminal,_and_HipA_N-terminal_domain


id: CL:5948
description: Mixed, incl. Fido domain, and RNA-directed DNA polymerase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5948_Mixed,_incl._Fido_domain,_and_RNA-directed_DNA_polymerase


id: CL:5950
description: Fido domain, and RNA-directed DNA polymerase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5950_Fido_domain,_and_RNA-directed_DNA_polymerase


id: CL:5971
description: Mixed, incl. Nickel cation binding, and Ammonium/urea transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5971_Mixed,_incl._Nickel_cation_binding,_and_Ammonium/urea_transporter


id: CL:599
description: Mixed, incl. Base-excision repair, and Transporter-associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:599_Mixed,_incl._Base-excision_repair,_and_Transporter-associated_domain


id: CL:5991
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:5991_Mixed,_incl._Protein_of_unknown_function_DUF6364,_and_Carbon-oxygen_lyase_activity,_acting_on_polysaccharides

description:
  Mixed, incl. Protein of unknown function DUF6364, and Carbon-oxygen lyase activity, acting on polysaccharides


id: CL:6005
description: Mixed, incl. Toxin-antitoxin complex, and Arachidonic acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:6005_Mixed,_incl._Toxin-antitoxin_complex,_and_Arachidonic_acid_metabolism


id: CL:6007
description: Mixed, incl. Toxin-antitoxin complex, and PIN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:6007_Mixed,_incl._Toxin-antitoxin_complex,_and_PIN_domain


id: CL:6009
description: Toxin-antitoxin complex, and mRNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:6009_Toxin-antitoxin_complex,_and_mRNA_binding


id: CL:601
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:601_Base-excision_repair,_and_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Base-excision repair, and Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: CL:6028
description: Mixed, incl. Arachidonic acid metabolism, and Metallodipeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:6028_Mixed,_incl._Arachidonic_acid_metabolism,_and_Metallodipeptidase_activity


id: CL:6038
description: Mixed, incl. Toxin-antitoxin system, RelE/ParE toxin family, and Ribbon-helix-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:6038_Mixed,_incl._Toxin-antitoxin_system,_RelE/ParE_toxin_family,_and_Ribbon-helix-helix


id: CL:6040
description: Mixed, incl. Ribbon-helix-helix, and Toxin-antitoxin system, RelE/ParE toxin family
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:6040_Mixed,_incl._Ribbon-helix-helix,_and_Toxin-antitoxin_system,_RelE/ParE_toxin_family


id: CL:6059
description: Mixed, incl. Peptidase M60-like family, and Cationic antimicrobial peptide (CAMP) resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:6059_Mixed,_incl._Peptidase_M60-like_family,_and_Cationic_antimicrobial_peptide_(CAMP)_resistance


id: CL:61
description: Translation, and RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:61_Translation,_and_RNA_metabolic_process


id: CL:62
description: Translation, and RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:62_Translation,_and_RNA_metabolic_process


id: CL:620
description: Mixed, incl. tRNA modification, and Protein alkylation
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:620_Mixed,_incl._tRNA_modification,_and_Protein_alkylation


id: CL:622
description: Methylthiotransferase, and Dihydrouridine synthase (Dus)
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:622_Methylthiotransferase,_and_Dihydrouridine_synthase_(Dus)


id: CL:63
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:63_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:639
description: Protein alkylation, and PUA-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:639_Protein_alkylation,_and_PUA-like_superfamily


id: CL:64
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:64_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:65
description: Ribosome, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:65_Ribosome,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:654
description: Mixed, incl. Antibiotic resistance, and DNA glycosylase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:654_Mixed,_incl._Antibiotic_resistance,_and_DNA_glycosylase


id: CL:66
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:66_Ribosome,_and_Translation_regulator_activity


id: CL:669
description: Polyphosphate kinase, and Ppx/GppA phosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:669_Polyphosphate_kinase,_and_Ppx/GppA_phosphatase


id: CL:67
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:67_Ribosome,_and_Translation_regulator_activity


id: CL:682
description: Mixed, incl. RNA 5-end processing, and Ketone catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:682_Mixed,_incl._RNA_5-end_processing,_and_Ketone_catabolic_process


id: CL:696
description: Nucleotide biosynthetic process, and Folate biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:696_Nucleotide_biosynthetic_process,_and_Folate_biosynthesis


id: CL:697
description: Nucleoside monophosphate metabolic process, and Pyrimidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:697_Nucleoside_monophosphate_metabolic_process,_and_Pyrimidine_metabolism


id: CL:698
description: Ribonucleoside monophosphate metabolic process, and Pyrimidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:698_Ribonucleoside_monophosphate_metabolic_process,_and_Pyrimidine_metabolism


id: CL:699
description: Ribonucleoside monophosphate metabolic process, and Uracil phosphoribosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:699_Ribonucleoside_monophosphate_metabolic_process,_and_Uracil_phosphoribosyltransferase_activity


id: CL:701
description: Purine nucleoside monophosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:701_Purine_nucleoside_monophosphate_biosynthetic_process


id: CL:71
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:71_Ribosome,_and_Translation_regulator_activity


id: CL:721
description: GMP biosynthesis, and 5-nucleotidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:721_GMP_biosynthesis,_and_5-nucleotidase_activity


id: CL:735
description: UMP biosynthetic process, and Uracil phosphoribosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:735_UMP_biosynthetic_process,_and_Uracil_phosphoribosyltransferase_activity


id: CL:737
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity, and Amino acid binding
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:737_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity,_and_Amino_acid_binding


id: CL:749
description: Uracil phosphoribosyltransferase activity, and UMP salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:749_Uracil_phosphoribosyltransferase_activity,_and_UMP_salvage


id: CL:75
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:75_Ribosome,_and_Translation_regulator_activity


id: CL:760
description: Phosphorylase superfamily, and 5-Nucleotidase/apyrase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:760_Phosphorylase_superfamily,_and_5-Nucleotidase/apyrase


id: CL:775
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:775_Mixed,_incl._Nucleobase-containing_compound_kinase_activity,_and_Ribonucleoside-diphosphate_reductase_complex

description:
  Mixed, incl. Nucleobase-containing compound kinase activity, and Ribonucleoside-diphosphate reductase complex


id: CL:776
description: Ribonucleoside-diphosphate reductase complex, and Nucleobase-containing compound kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:776_Ribonucleoside-diphosphate_reductase_complex,_and_Nucleobase-containing_compound_kinase_activity


id: CL:779
description: Ribonucleoside-diphosphate reductase complex, and GMP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:779_Ribonucleoside-diphosphate_reductase_complex,_and_GMP_metabolic_process


id: CL:802
description: Deoxyribonucleoside monophosphate biosynthetic process, and Dihydrofolate reductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:802_Deoxyribonucleoside_monophosphate_biosynthetic_process,_and_Dihydrofolate_reductase_activity


id: CL:816
description: Mixed, incl. Pyridine nucleotide biosynthetic process, and Folate biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:816_Mixed,_incl._Pyridine_nucleotide_biosynthetic_process,_and_Folate_biosynthesis


id: CL:817
description: Folate biosynthesis, and Pantothenate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:817_Folate_biosynthesis,_and_Pantothenate_metabolic_process


id: CL:818
description: Folate biosynthesis, and Riboflavin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:818_Folate_biosynthesis,_and_Riboflavin_metabolic_process


id: CL:820
description: Folic acid-containing compound biosynthetic process, and Cell adhesion
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:820_Folic_acid-containing_compound_biosynthetic_process,_and_Cell_adhesion


id: CL:83
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:83_Structural_constituent_of_ribosome


id: CL:849
description: Pantothenate metabolic process, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:849_Pantothenate_metabolic_process,_and_Coenzyme_A_biosynthesis


id: CL:862
description: Pyridine nucleotide biosynthetic process, and Pyrimidine-containing compound catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:862_Pyridine_nucleotide_biosynthetic_process,_and_Pyrimidine-containing_compound_catabolic_process


id: CL:865
description: Pyridine nucleotide biosynthetic process, and Pyrimidine-containing compound catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:865_Pyridine_nucleotide_biosynthetic_process,_and_Pyrimidine-containing_compound_catabolic_process


id: CL:866
description: Pyridine nucleotide biosynthetic process, and UTP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:866_Pyridine_nucleotide_biosynthetic_process,_and_UTP_metabolic_process


id: CL:877
description: Nicotinamide nucleotide biosynthetic process, and NAD+ binding
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:877_Nicotinamide_nucleotide_biosynthetic_process,_and_NAD+_binding


id: CL:890
description: Ribosylnicotinamide kinase activity, and Nicotinamide riboside transport
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:890_Ribosylnicotinamide_kinase_activity,_and_Nicotinamide_riboside_transport


id: CL:902
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:902_Mixed,_incl._Cation_efflux_family,_and_ATP-dependent_DNA_helicase_RecG/Transcription-repair-coupling_factor

description:
  Mixed, incl. Cation efflux family, and ATP-dependent DNA helicase RecG/Transcription-repair-coupling factor


id: CL:913
description: Mixed, incl. AAA domain, and NUDIX hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:913_Mixed,_incl._AAA_domain,_and_NUDIX_hydrolase


id: CL:915
description: Mixed, incl. AAA domain, and Histone-like DNA-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:915_Mixed,_incl._AAA_domain,_and_Histone-like_DNA-binding_protein


id: CL:934
description: Mixed, incl. Carbon metabolism, and Fatty acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:934_Mixed,_incl._Carbon_metabolism,_and_Fatty_acid_metabolism


id: CL:935
description: Mixed, incl. Carbon metabolism, and Fatty acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:935_Mixed,_incl._Carbon_metabolism,_and_Fatty_acid_metabolism


id: CL:937
description: Carbon metabolism, and Valine, leucine and isoleucine degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:937_Carbon_metabolism,_and_Valine,_leucine_and_isoleucine_degradation


id: CL:938
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:938_Mixed,_incl._Citrate_cycle_(TCA_cycle),_and_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors

description:
  Mixed, incl. Citrate cycle (TCA cycle), and Oxidoreductase activity, acting on the CH-NH2 group of donors


id: CL:939
description: Citrate cycle (TCA cycle), and Oxidoreductase activity, acting on the CH-NH2 group of donors
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:939_Citrate_cycle_(TCA_cycle),_and_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: CL:94
description: rRNA-binding, and Translation protein SH3-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:94_rRNA-binding,_and_Translation_protein_SH3-like_domain_superfamily


id: CL:941
description: Citrate cycle (TCA cycle), and Glycine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:941_Citrate_cycle_(TCA_cycle),_and_Glycine_metabolic_process


id: CL:943
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:943_Mixed,_incl._Dihydrolipoyl_dehydrogenase_activity,_and_acetyl-CoA_biosynthetic_process_from_pyruvate

description:
  Mixed, incl. Dihydrolipoyl dehydrogenase activity, and acetyl-CoA biosynthetic process from pyruvate


id: CL:945
description: Dehydrogenase, E1 component, and Dihydrolipoamide dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:945_Dehydrogenase,_E1_component,_and_Dihydrolipoamide_dehydrogenase


id: CL:96
description: Large ribosomal subunit rRNA binding, and Translation protein, beta-barrel domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:96_Large_ribosomal_subunit_rRNA_binding,_and_Translation_protein,_beta-barrel_domain_superfamily


id: CL:965
description: Glycine catabolic process, and Beta-eliminating lyase
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:965_Glycine_catabolic_process,_and_Beta-eliminating_lyase


id: CL:981
description: Tricarboxylic acid cycle, and Malate dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:981_Tricarboxylic_acid_cycle,_and_Malate_dehydrogenase_activity


id: CL:996
description: 2Fe-2S iron-sulfur cluster binding domain, and FAD-dependent oxidoreductase SdhA/FrdA/AprA
name:
  Local Network Cluster (STRING).STRING_v12.0_241145_STRINGid_CL:996_2Fe-2S_iron-sulfur_cluster_binding_domain,_and_FAD-dependent_oxidoreductase_SdhA/FrdA/AprA


id: GO:0000701
description: Purine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0000701
golevel: 7
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0000701_Purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 10
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0003864
description: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003864
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0003864_3-methyl-2-oxobutanoate_hydroxymethyltransferase_activity


id: GO:0003871
description: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003871
golevel: 6
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0003871_5-methyltetrahydropteroyltriglutamate-homocysteine_S-methyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 6
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0004015
description: adenosylmethionine-8-amino-7-oxononanoate transaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004015
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0004015_adenosylmethionine-8-amino-7-oxononanoate_transaminase_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004149
description: Dihydrolipoyllysine-residue succinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004149
golevel: 7
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0004149_Dihydrolipoyllysine-residue_succinyltransferase_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
golevel: 6
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 6
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004591
description: Oxoglutarate dehydrogenase (succinyl-transferring) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004591
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0004591_Oxoglutarate_dehydrogenase_(succinyl-transferring)_activity


id: GO:0004604
description: Phosphoadenylyl-sulfate reductase (thioredoxin) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004604
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0004604_Phosphoadenylyl-sulfate_reductase_(thioredoxin)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004648
description: O-phospho-L-serine:2-oxoglutarate aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004648
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0004648_O-phospho-L-serine:2-oxoglutarate_aminotransferase_activity


id: GO:0004719
description: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004719
golevel: 8
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0004719_protein-L-isoaspartate_(D-aspartate)_O-methyltransferase_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0006303
description: Double-strand break repair via nonhomologous end joining
memo: https://amigo.geneontology.org/amigo/term/GO:0006303
golevel: 9
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0006303_Double-strand_break_repair_via_nonhomologous_end_joining


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 11
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0007156
description: Homophilic cell adhesion via plasma membrane adhesion molecules
memo: https://amigo.geneontology.org/amigo/term/GO:0007156
golevel: 5
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0007156_Homophilic_cell_adhesion_via_plasma_membrane_adhesion_molecules


id: GO:0008108
description: UDP-glucose:hexose-1-phosphate uridylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008108
golevel: 6
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0008108_UDP-glucose:hexose-1-phosphate_uridylyltransferase_activity


id: GO:0008124
description: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008124
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0008124_4-alpha-hydroxytetrahydrobiopterin_dehydratase_activity


id: GO:0008263
description: Pyrimidine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008263
golevel: 7
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0008263_Pyrimidine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0008271
description: Secondary active sulfate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008271
golevel: 6
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0008271_Secondary_active_sulfate_transmembrane_transporter_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 7
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008690
description: 3-deoxy-manno-octulosonate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008690
golevel: 6
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0008690_3-deoxy-manno-octulosonate_cytidylyltransferase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
golevel: 6
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008759
description: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008759
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0008759_UDP-3-O-[3-hydroxymyristoyl]_N-acetylglucosamine_deacetylase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008780
description: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008780
golevel: 6
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0008780_acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine_O-acyltransferase_activity


id: GO:0008817
description: cob(I)yrinic acid a,c-diamide adenosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008817
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0008817_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 9
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 9
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 9
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 10
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 9
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 10
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009175
description: Pyrimidine ribonucleoside monophosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009175
golevel: 10
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0009175_Pyrimidine_ribonucleoside_monophosphate_catabolic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 9
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 10
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009196
description: Pyrimidine deoxyribonucleoside diphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009196
golevel: 9
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0009196_Pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process


id: GO:0009197
description: Pyrimidine deoxyribonucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009197
golevel: 10
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0009197_Pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 10
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 9
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 10
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009210
description: Pyrimidine ribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009210
golevel: 10
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0009210_Pyrimidine_ribonucleoside_triphosphate_catabolic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 9
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 10
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 10
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 9
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 10
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 6
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 6
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 6
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
golevel: 3
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015932
description: Nucleobase-containing compound transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015932
golevel: 3
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0015932_Nucleobase-containing_compound_transmembrane_transporter_activity


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016624
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016624
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016624_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_disulfide_as_acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016641
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016641
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016641_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_oxygen_as_acceptor


id: GO:0016642
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016642
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016642_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_disulfide_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016653
description: Oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016653
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016653_Oxidoreductase_activity,_acting_on_NAD(P)H,_heme_protein_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016661
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016661
golevel: 3
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016661_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors


id: GO:0016662
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016662
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016662_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors,_cytochrome_as_acceptor


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016670
description: Oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016670
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016670_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_oxygen_as_acceptor


id: GO:0016671
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016671
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016671_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: GO:0016675
description: Oxidoreductase activity, acting on a heme group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016675
golevel: 3
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016675_Oxidoreductase_activity,_acting_on_a_heme_group_of_donors


id: GO:0016684
description: Oxidoreductase activity, acting on peroxide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016684
golevel: 3
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016684_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


id: GO:0016701
description: Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
memo: https://amigo.geneontology.org/amigo/term/GO:0016701
golevel: 3
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016701_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen


id: GO:0016702
memo: https://amigo.geneontology.org/amigo/term/GO:0016702
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016702_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_two_atoms_of_oxygen

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen


id: GO:0016703
memo: https://amigo.geneontology.org/amigo/term/GO:0016703
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016703_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_one_atom_of_oxygen_(internal_monooxygenases_or_internal_mixed_function_oxidases)

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)


id: GO:0016705
memo: https://amigo.geneontology.org/amigo/term/GO:0016705
golevel: 3
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016705_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: GO:0016709
memo: https://amigo.geneontology.org/amigo/term/GO:0016709
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016709_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen


id: GO:0016712
memo: https://amigo.geneontology.org/amigo/term/GO:0016712
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016712_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_reduced_flavin_or_flavoprotein_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen


id: GO:0016714
memo: https://amigo.geneontology.org/amigo/term/GO:0016714
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016714_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_reduced_pteridine_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen


id: GO:0016716
memo: https://amigo.geneontology.org/amigo/term/GO:0016716
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016716_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_another_compound_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen


id: GO:0016717
memo: https://amigo.geneontology.org/amigo/term/GO:0016717
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016717_Oxidoreductase_activity,_acting_on_paired_donors,_with_oxidation_of_a_pair_of_donors_resulting_in_the_reduction_of_molecular_oxygen_to_two_molecules_of_water

description:
  Oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water


id: GO:0016721
description: Oxidoreductase activity, acting on superoxide radicals as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016721
golevel: 3
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016721_Oxidoreductase_activity,_acting_on_superoxide_radicals_as_acceptor


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016730
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016730
golevel: 3
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016730_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors


id: GO:0016731
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016731
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016731_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_NAD_or_NADP_as_acceptor


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016774
description: Phosphotransferase activity, carboxyl group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016774
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016774_Phosphotransferase_activity,_carboxyl_group_as_acceptor


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
golevel: 6
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016823
description: Hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances
memo: https://amigo.geneontology.org/amigo/term/GO:0016823
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016823_Hydrolase_activity,_acting_on_acid_carbon-carbon_bonds,_in_ketonic_substances


id: GO:0016825
description: Hydrolase activity, acting on acid phosphorus-nitrogen bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016825
golevel: 3
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016825_Hydrolase_activity,_acting_on_acid_phosphorus-nitrogen_bonds


id: GO:0016837
description: Carbon-oxygen lyase activity, acting on polysaccharides
memo: https://amigo.geneontology.org/amigo/term/GO:0016837
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016837_Carbon-oxygen_lyase_activity,_acting_on_polysaccharides


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016863
description: Intramolecular oxidoreductase activity, transposing C=C bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016863
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016863_Intramolecular_oxidoreductase_activity,_transposing_C=C_bonds


id: GO:0016868
description: Intramolecular transferase activity, phosphotransferases
memo: https://amigo.geneontology.org/amigo/term/GO:0016868
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016868_Intramolecular_transferase_activity,_phosphotransferases


id: GO:0016869
description: Intramolecular transferase activity, transferring amino groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016869
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016869_Intramolecular_transferase_activity,_transferring_amino_groups


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016888
description: Endodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016888
golevel: 7
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016888_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016889
description: Endodeoxyribonuclease activity, producing 3-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016889
golevel: 7
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016889_Endodeoxyribonuclease_activity,_producing_3-phosphomonoesters


id: GO:0016891
description: Endoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016891
golevel: 7
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016891_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
golevel: 6
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016894
memo: https://amigo.geneontology.org/amigo/term/GO:0016894
golevel: 6
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016894_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_3-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3-phosphomonoesters


id: GO:0016895
description: Exodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016895
golevel: 7
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016895_Exodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016896
description: Exoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016896
golevel: 7
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016896_Exoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016903
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016903
golevel: 3
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0016903_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors


id: GO:0017183
description: Peptidyl-diphthamide biosynthetic process from peptidyl-histidine
memo: https://amigo.geneontology.org/amigo/term/GO:0017183
golevel: 11
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0017183_Peptidyl-diphthamide_biosynthetic_process_from_peptidyl-histidine


id: GO:0018339
description: peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid
memo: https://amigo.geneontology.org/amigo/term/GO:0018339
golevel: 8
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0018339_peptidyl-L-beta-methylthioaspartic_acid_biosynthetic_process_from_peptidyl-aspartic_acid


id: GO:0019171
description: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019171
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0019171_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0019219
description: Regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019219
golevel: 5
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0019219_Regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0019243
description: Methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
memo: https://amigo.geneontology.org/amigo/term/GO:0019243
golevel: 9
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0019243_Methylglyoxal_catabolic_process_to_D-lactate_via_S-lactoyl-glutathione


id: GO:0019287
description: Isopentenyl diphosphate biosynthetic process, mevalonate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0019287
golevel: 12
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0019287_Isopentenyl_diphosphate_biosynthetic_process,_mevalonate_pathway


id: GO:0019379
memo: https://amigo.geneontology.org/amigo/term/GO:0019379
golevel: 5
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0019379_Sulfate_assimilation,_phosphoadenylyl_sulfate_reduction_by_phosphoadenylyl-sulfate_reductase_(thioredoxin)

description:
  Sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)


id: GO:0019829
description: ATPase-coupled cation transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019829
golevel: 6
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0019829_ATPase-coupled_cation_transmembrane_transporter_activity


id: GO:0030613
description: Oxidoreductase activity, acting on phosphorus or arsenic in donors
memo: https://amigo.geneontology.org/amigo/term/GO:0030613
golevel: 3
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0030613_Oxidoreductase_activity,_acting_on_phosphorus_or_arsenic_in_donors


id: GO:0030614
description: Oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0030614
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0030614_Oxidoreductase_activity,_acting_on_phosphorus_or_arsenic_in_donors,_disulfide_as_acceptor


id: GO:0031233
description: Intrinsic component of external side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031233
name:
  GOCC.STRING_v12.0_241145_STRINGid_GO:0031233_Intrinsic_component_of_external_side_of_plasma_membrane


id: GO:0031235
description: Intrinsic component of the cytoplasmic side of the plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031235
name:
  GOCC.STRING_v12.0_241145_STRINGid_GO:0031235_Intrinsic_component_of_the_cytoplasmic_side_of_the_plasma_membrane


id: GO:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
golevel: 3
name:
  GOCC.STRING_v12.0_241145_STRINGid_GO:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GO:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
golevel: 3
name:
  GOCC.STRING_v12.0_241145_STRINGid_GO:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GO:0033362
description: Lysine biosynthetic process via diaminopimelate, diaminopimelate-aminotransferase pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0033362
golevel: 12
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0033362_Lysine_biosynthetic_process_via_diaminopimelate,_diaminopimelate-aminotransferase_pathway


id: GO:0033467
description: CMP-keto-3-deoxy-D-manno-octulosonic acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033467
golevel: 7
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0033467_CMP-keto-3-deoxy-D-manno-octulosonic_acid_metabolic_process


id: GO:0033468
description: CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033468
golevel: 8
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0033468_CMP-keto-3-deoxy-D-manno-octulosonic_acid_biosynthetic_process


id: GO:0033512
description: L-lysine catabolic process to acetyl-CoA via saccharopine
memo: https://amigo.geneontology.org/amigo/term/GO:0033512
golevel: 13
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0033512_L-lysine_catabolic_process_to_acetyl-CoA_via_saccharopine


id: GO:0033695
description: Oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0033695
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0033695_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_quinone_or_similar_compound_as_acceptor


id: GO:0033744
description: L-methionine:thioredoxin-disulfide S-oxidoreductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033744
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0033744_L-methionine:thioredoxin-disulfide_S-oxidoreductase_activity


id: GO:0033764
description: Steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0033764
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0033764_Steroid_dehydrogenase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0033818
description: Beta-ketoacyl-acyl-carrier-protein synthase III activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033818
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0033818_Beta-ketoacyl-acyl-carrier-protein_synthase_III_activity


id: GO:0034023
description: 5-(carboxyamino)imidazole ribonucleotide mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034023
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0034023_5-(carboxyamino)imidazole_ribonucleotide_mutase_activity


id: GO:0034028
description: 5-(carboxyamino)imidazole ribonucleotide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034028
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0034028_5-(carboxyamino)imidazole_ribonucleotide_synthase_activity


id: GO:0034249
description: Negative regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034249
golevel: 6
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0034249_Negative_regulation_of_cellular_amide_metabolic_process


id: GO:0034250
description: Positive regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034250
golevel: 6
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0034250_Positive_regulation_of_cellular_amide_metabolic_process


id: GO:0034257
description: Nicotinamide riboside transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034257
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0034257_Nicotinamide_riboside_transmembrane_transporter_activity


id: GO:0034404
description: Nucleobase-containing small molecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034404
golevel: 6
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0034404_Nucleobase-containing_small_molecule_biosynthetic_process


id: GO:0035592
description: Establishment of protein localization to extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0035592
golevel: 6
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0035592_Establishment_of_protein_localization_to_extracellular_region


id: GO:0035998
description: 7,8-dihydroneopterin 3-triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0035998
golevel: 6
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0035998_7,8-dihydroneopterin_3-triphosphate_biosynthetic_process


id: GO:0036361
description: Racemase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0036361
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0036361_Racemase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0042083
description: 5,10-methylenetetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042083
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0042083_5,10-methylenetetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042084
description: 5-methyltetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042084
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0042084_5-methyltetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042085
description: 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042085
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0042085_5-methyltetrahydropteroyltri-L-glutamate-dependent_methyltransferase_activity


id: GO:0042279
description: Nitrite reductase (cytochrome, ammonia-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042279
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0042279_Nitrite_reductase_(cytochrome,_ammonia-forming)_activity


id: GO:0042777
description: Proton motive force-driven plasma membrane ATP synthesis
memo: https://amigo.geneontology.org/amigo/term/GO:0042777
golevel: 13
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0042777_Proton_motive_force-driven_plasma_membrane_ATP_synthesis


id: GO:0044419
description: Biological process involved in interspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0044419
golevel: 1
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0044419_Biological_process_involved_in_interspecies_interaction_between_organisms


id: GO:0044769
description: ATPase activity, coupled to transmembrane movement of ions, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0044769
golevel: 7
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0044769_ATPase_activity,_coupled_to_transmembrane_movement_of_ions,_rotational_mechanism


id: GO:0045156
memo: https://amigo.geneontology.org/amigo/term/GO:0045156
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0045156_Electron_transporter,_transferring_electrons_within_the_cyclic_electron_transport_pathway_of_photosynthesis_activity

description:
  Electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity


id: GO:0045261
description: Proton-transporting ATP synthase complex, catalytic core F(1)
memo: https://amigo.geneontology.org/amigo/term/GO:0045261
golevel: 6
name:
  GOCC.STRING_v12.0_241145_STRINGid_GO:0045261_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: GO:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
golevel: 6
name:
  GOCC.STRING_v12.0_241145_STRINGid_GO:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GO:0045934
description: Negative regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045934
golevel: 6
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0045934_Negative_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0045935
description: Positive regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045935
golevel: 6
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0045935_Positive_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0046537
description: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046537
golevel: 6
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0046537_2,3-bisphosphoglycerate-independent_phosphoglycerate_mutase_activity


id: GO:0046912
description: Acyltransferase activity, acyl groups converted into alkyl on transfer
memo: https://amigo.geneontology.org/amigo/term/GO:0046912
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0046912_Acyltransferase_activity,_acyl_groups_converted_into_alkyl_on_transfer


id: GO:0046915
description: Transition metal ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046915
golevel: 6
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0046915_Transition_metal_ion_transmembrane_transporter_activity


id: GO:0046933
description: Proton-transporting ATP synthase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046933
golevel: 8
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0046933_Proton-transporting_ATP_synthase_activity,_rotational_mechanism


id: GO:0046961
description: Proton-transporting ATPase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046961
golevel: 8
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0046961_Proton-transporting_ATPase_activity,_rotational_mechanism


id: GO:0047451
description: 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047451
golevel: 6
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0047451_3-hydroxyoctanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0047480
description: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047480
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0047480_UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine_ligase_activity


id: GO:0048646
description: Anatomical structure formation involved in morphogenesis
memo: https://amigo.geneontology.org/amigo/term/GO:0048646
golevel: 2
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0048646_Anatomical_structure_formation_involved_in_morphogenesis


id: GO:0050486
description: Intramolecular transferase activity, transferring hydroxy groups
memo: https://amigo.geneontology.org/amigo/term/GO:0050486
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0050486_Intramolecular_transferase_activity,_transferring_hydroxy_groups


id: GO:0050511
description: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050511
golevel: 6
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0050511_Undecaprenyldiphospho-muramoylpentapeptide_beta-N-acetylglucosaminyltransferase_activity


id: GO:0050567
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050567
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0050567_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0051003
description: Ligase activity, forming nitrogen-metal bonds, forming coordination complexes
memo: https://amigo.geneontology.org/amigo/term/GO:0051003
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0051003_Ligase_activity,_forming_nitrogen-metal_bonds,_forming_coordination_complexes


id: GO:0051075
description: S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051075
golevel: 3
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0051075_S-adenosylmethionine:tRNA_ribosyltransferase-isomerase_activity


id: GO:0051172
description: Negative regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051172
golevel: 5
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0051172_Negative_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051173
description: Positive regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051173
golevel: 5
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0051173_Positive_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051703
description: Biological process involved in intraspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0051703
golevel: 1
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0051703_Biological_process_involved_in_intraspecies_interaction_between_organisms


id: GO:0051991
memo: https://amigo.geneontology.org/amigo/term/GO:0051991
golevel: 6
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0051991_UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol_4-beta-N-acetylglucosaminlytransferase_activity

description:
  UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity


id: GO:0051992
memo: https://amigo.geneontology.org/amigo/term/GO:0051992
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0051992_UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate_transferase_activity

description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity


id: GO:0052907
description: 23S rRNA (adenine(1618)-N(6))-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052907
golevel: 9
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0052907_23S_rRNA_(adenine(1618)-N(6))-methyltransferase_activity


id: GO:0052908
description: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052908
golevel: 9
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0052908_16S_rRNA_(adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase_activity


id: GO:0061695
description: Transferase complex, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0061695
golevel: 4
name:
  GOCC.STRING_v12.0_241145_STRINGid_GO:0061695_Transferase_complex,_transferring_phosphorus-containing_groups


id: GO:0070204
description: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0070204
golevel: 4
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0070204_2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid_synthase_activity


id: GO:0070626
memo: https://amigo.geneontology.org/amigo/term/GO:0070626
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0070626_(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)_succinate_lyase_(fumarate-forming)_activity

description:
  (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity


id: GO:0070647
description: Protein modification by small protein conjugation or removal
memo: https://amigo.geneontology.org/amigo/term/GO:0070647
golevel: 6
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0070647_Protein_modification_by_small_protein_conjugation_or_removal


id: GO:0071951
description: Conversion of methionyl-tRNA to N-formyl-methionyl-tRNA
memo: https://amigo.geneontology.org/amigo/term/GO:0071951
golevel: 12
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0071951_Conversion_of_methionyl-tRNA_to_N-formyl-methionyl-tRNA


id: GO:0072599
description: Establishment of protein localization to endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0072599
golevel: 7
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0072599_Establishment_of_protein_localization_to_endoplasmic_reticulum


id: GO:0097174
description: 1,6-anhydro-N-acetyl-beta-muramic acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0097174
golevel: 7
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0097174_1,6-anhydro-N-acetyl-beta-muramic_acid_metabolic_process


id: GO:0097175
description: 1,6-anhydro-N-acetyl-beta-muramic acid catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0097175
golevel: 8
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0097175_1,6-anhydro-N-acetyl-beta-muramic_acid_catabolic_process


id: GO:0097588
description: Archaeal or bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:0097588
golevel: 4
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0097588_Archaeal_or_bacterial-type_flagellum-dependent_cell_motility


id: GO:0098519
description: Nucleotide phosphatase activity, acting on free nucleotides
memo: https://amigo.geneontology.org/amigo/term/GO:0098519
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0098519_Nucleotide_phosphatase_activity,_acting_on_free_nucleotides


id: GO:0098742
description: Cell-cell adhesion via plasma-membrane adhesion molecules
memo: https://amigo.geneontology.org/amigo/term/GO:0098742
golevel: 4
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0098742_Cell-cell_adhesion_via_plasma-membrane_adhesion_molecules


id: GO:0102027
description: S-adenosylmethionine:2-demethylquinol-8 methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102027
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0102027_S-adenosylmethionine:2-demethylquinol-8_methyltransferase_activity


id: GO:0102094
description: S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102094
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0102094_S-adenosylmethionine:2-demethylmenaquinol_methyltransferase_activity


id: GO:0102552
description: Lipoyl synthase activity (acting on glycine-cleavage complex H protein
memo: https://amigo.geneontology.org/amigo/term/GO:0102552
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0102552_Lipoyl_synthase_activity_(acting_on_glycine-cleavage_complex_H_protein


id: GO:0102553
description: Lipoyl synthase activity (acting on pyruvate dehydrogenase E2 protein)
memo: https://amigo.geneontology.org/amigo/term/GO:0102553
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0102553_Lipoyl_synthase_activity_(acting_on_pyruvate_dehydrogenase_E2_protein)


id: GO:0102752
memo: https://amigo.geneontology.org/amigo/term/GO:0102752
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0102752_1,4-alpha-glucan_branching_enzyme_activity_(using_a_glucosylated_glycogenin_as_primer_for_glycogen_synthesis)

description:
  1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis)


id: GO:0102955
description: S-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102955
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0102955_S-adenosylmethionine:2-demethylmenaquinol-7_methyltransferase_activity


id: GO:0106074
description: aminoacyl-tRNA metabolism involved in translational fidelity
memo: https://amigo.geneontology.org/amigo/term/GO:0106074
golevel: 9
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:0106074_aminoacyl-tRNA_metabolism_involved_in_translational_fidelity


id: GO:0140078
description: Class I DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0140078
golevel: 5
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:0140078_Class_I_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:1900191
description: Negative regulation of single-species biofilm formation
memo: https://amigo.geneontology.org/amigo/term/GO:1900191
golevel: 7
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:1900191_Negative_regulation_of_single-species_biofilm_formation


id: GO:1901505
description: Carbohydrate derivative transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:1901505
golevel: 3
name:
  GOMF.STRING_v12.0_241145_STRINGid_GO:1901505_Carbohydrate_derivative_transmembrane_transporter_activity


id: GO:1902021
description: Regulation of bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:1902021
golevel: 6
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:1902021_Regulation_of_bacterial-type_flagellum-dependent_cell_motility


id: GO:1902221
description: Erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1902221
golevel: 8
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:1902221_Erythrose_4-phosphate/phosphoenolpyruvate_family_amino_acid_metabolic_process


id: GO:1902222
description: Erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1902222
golevel: 9
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:1902222_Erythrose_4-phosphate/phosphoenolpyruvate_family_amino_acid_catabolic_process


id: GO:1902223
description: Erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:1902223
golevel: 9
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:1902223_Erythrose_4-phosphate/phosphoenolpyruvate_family_amino_acid_biosynthetic_process


id: GO:1903507
description: Negative regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903507
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:1903507_Negative_regulation_of_nucleic_acid-templated_transcription


id: GO:1903508
description: Positive regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903508
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:1903508_Positive_regulation_of_nucleic_acid-templated_transcription


id: GO:1904951
description: Positive regulation of establishment of protein localization
memo: https://amigo.geneontology.org/amigo/term/GO:1904951
golevel: 7
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:1904951_Positive_regulation_of_establishment_of_protein_localization


id: GO:2000112
description: Regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000112
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:2000112_Regulation_of_cellular_macromolecule_biosynthetic_process


id: GO:2000113
description: Negative regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000113
name:
  GOBP.STRING_v12.0_241145_STRINGid_GO:2000113_Negative_regulation_of_cellular_macromolecule_biosynthetic_process


id: GOCC:0000015
description: Phosphopyruvate hydratase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000015
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0000015_Phosphopyruvate_hydratase_complex


id: GOCC:0000138
description: Golgi trans cisterna
memo: https://amigo.geneontology.org/amigo/term/GO:0000138
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0000138_Golgi_trans_cisterna


id: GOCC:0000151
description: Ubiquitin ligase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000151
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0000151_Ubiquitin_ligase_complex


id: GOCC:0000313
description: Organellar ribosome
memo: https://amigo.geneontology.org/amigo/term/GO:0000313
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0000313_Organellar_ribosome


id: GOCC:0000314
description: Organellar small ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0000314
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0000314_Organellar_small_ribosomal_subunit


id: GOCC:0000325
description: Plant-type vacuole
memo: https://amigo.geneontology.org/amigo/term/GO:0000325
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0000325_Plant-type_vacuole


id: GOCC:0000345
description: Cytosolic DNA-directed RNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000345
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0000345_Cytosolic_DNA-directed_RNA_polymerase_complex


id: GOCC:0000428
description: DNA-directed RNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000428
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0000428_DNA-directed_RNA_polymerase_complex


id: GOCC:0000502
description: Proteasome complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000502
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0000502_Proteasome_complex


id: GOCC:0000781
description: Chromosome, telomeric region
memo: https://amigo.geneontology.org/amigo/term/GO:0000781
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0000781_Chromosome,_telomeric_region


id: GOCC:0000930
description: Gamma-tubulin complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000930
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0000930_Gamma-tubulin_complex


id: GOCC:0000931
description: Gamma-tubulin large complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000931
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0000931_Gamma-tubulin_large_complex


id: GOCC:0002189
description: Ribose phosphate diphosphokinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0002189
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0002189_Ribose_phosphate_diphosphokinase_complex


id: GOCC:0005576
description: Extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0005576
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0005576_Extracellular_region


id: GOCC:0005615
description: Extracellular space
memo: https://amigo.geneontology.org/amigo/term/GO:0005615
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0005615_Extracellular_space


id: GOCC:0005727
description: Extrachromosomal circular DNA
memo: https://amigo.geneontology.org/amigo/term/GO:0005727
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0005727_Extrachromosomal_circular_DNA


id: GOCC:0005740
description: Mitochondrial envelope
memo: https://amigo.geneontology.org/amigo/term/GO:0005740
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0005740_Mitochondrial_envelope


id: GOCC:0005741
description: Mitochondrial outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005741
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0005741_Mitochondrial_outer_membrane


id: GOCC:0005743
description: Mitochondrial inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005743
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0005743_Mitochondrial_inner_membrane


id: GOCC:0005746
description: Mitochondrial respirasome
memo: https://amigo.geneontology.org/amigo/term/GO:0005746
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0005746_Mitochondrial_respirasome


id: GOCC:0005747
description: Mitochondrial respiratory chain complex I
memo: https://amigo.geneontology.org/amigo/term/GO:0005747
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0005747_Mitochondrial_respiratory_chain_complex_I


id: GOCC:0005758
description: Mitochondrial intermembrane space
memo: https://amigo.geneontology.org/amigo/term/GO:0005758
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0005758_Mitochondrial_intermembrane_space


id: GOCC:0005759
description: Mitochondrial matrix
memo: https://amigo.geneontology.org/amigo/term/GO:0005759
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0005759_Mitochondrial_matrix


id: GOCC:0005761
description: Mitochondrial ribosome
memo: https://amigo.geneontology.org/amigo/term/GO:0005761
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0005761_Mitochondrial_ribosome


id: GOCC:0005763
description: Mitochondrial small ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0005763
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0005763_Mitochondrial_small_ribosomal_subunit


id: GOCC:0005765
description: Lysosomal membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005765
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0005765_Lysosomal_membrane


id: GOCC:0005778
description: Peroxisomal membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005778
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0005778_Peroxisomal_membrane


id: GOCC:0005783
description: Endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0005783
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0005783_Endoplasmic_reticulum


id: GOCC:0005788
description: Endoplasmic reticulum lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0005788
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0005788_Endoplasmic_reticulum_lumen


id: GOCC:0005789
description: Endoplasmic reticulum membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005789
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0005789_Endoplasmic_reticulum_membrane


id: GOCC:0005793
description: Endoplasmic reticulum-Golgi intermediate compartment
memo: https://amigo.geneontology.org/amigo/term/GO:0005793
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0005793_Endoplasmic_reticulum-Golgi_intermediate_compartment


id: GOCC:0005798
description: Golgi-associated vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0005798
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0005798_Golgi-associated_vesicle


id: GOCC:0005802
description: trans-Golgi network
memo: https://amigo.geneontology.org/amigo/term/GO:0005802
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0005802_trans-Golgi_network


id: GOCC:0005815
description: Microtubule organizing center
memo: https://amigo.geneontology.org/amigo/term/GO:0005815
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0005815_Microtubule_organizing_center


id: GOCC:0005835
description: Fatty acid synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005835
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0005835_Fatty_acid_synthase_complex


id: GOCC:0005847
description: mRNA cleavage and polyadenylation specificity factor complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005847
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0005847_mRNA_cleavage_and_polyadenylation_specificity_factor_complex


id: GOCC:0005849
description: mRNA cleavage factor complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005849
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0005849_mRNA_cleavage_factor_complex


id: GOCC:0005875
description: Microtubule associated complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005875
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0005875_Microtubule_associated_complex


id: GOCC:0005882
description: Intermediate filament
memo: https://amigo.geneontology.org/amigo/term/GO:0005882
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0005882_Intermediate_filament


id: GOCC:0005887
description: Integral component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005887
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0005887_Integral_component_of_plasma_membrane


id: GOCC:0005911
description: Cell-cell junction
memo: https://amigo.geneontology.org/amigo/term/GO:0005911
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0005911_Cell-cell_junction


id: GOCC:0005945
description: 6-phosphofructokinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005945
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0005945_6-phosphofructokinase_complex


id: GOCC:0005948
description: Acetolactate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005948
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_241145_STRINGid_GOCC:0005948_Acetolactate_synthase_complex


