# geneInfo

ensembl_gene_id: CCDG5_0001
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: CCDG5_0002
symbol: CCDG5_0002
gene_biotype: protein_coding
description:
  DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of  [...]


ensembl_gene_id: CCDG5_0004
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: CCDG5_0006
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: CCDG5_0007
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: CCDG5_0009
symbol: CCDG5_0009
gene_biotype: protein_coding
description:
  Hypothetical protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: CCDG5_0011
symbol: CCDG5_0011
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.


ensembl_gene_id: CCDG5_0012
symbol: CCDG5_0012
gene_biotype: protein_coding
description:
  Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: CCDG5_0014
symbol: xylA
gene_biotype: protein_coding
description:
  Xylose isomerase; High confidence in function and specificity; Belongs to the xylose isomerase family.


ensembl_gene_id: CCDG5_0036
symbol: cls
gene_biotype: protein_coding
description:
  Cardiolipin synthetase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.


ensembl_gene_id: CCDG5_0037
symbol: ADSL
gene_biotype: protein_coding
description:
  Adenylosuccinate lyase; High confidence in function and specificity; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.


ensembl_gene_id: CCDG5_0038
symbol: secD
gene_biotype: protein_coding
description:
  Protein-export membrane protein, SecD/SecF family; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: CCDG5_0039
symbol: secF
gene_biotype: protein_coding
description:
  Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: CCDG5_0043
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: CCDG5_0055
symbol: aguA
gene_biotype: protein_coding
description:
  Alpha-glucuronidase; High confidence in function and specificity; Belongs to the glycosyl hydrolase 67 family.


ensembl_gene_id: CCDG5_0058
symbol: CCDG5_0058
gene_biotype: protein_coding
description:
  Binding-protein-dependent transport systems inner membrane component; High confidence in function and specificity.


ensembl_gene_id: CCDG5_0059
symbol: CCDG5_0059
gene_biotype: protein_coding
description:
  Glycoside hydrolase family protein; High confidence in function and specificity; Belongs to the glycosyl hydrolase 2 family.


ensembl_gene_id: CCDG5_0060
symbol: CCDG5_0060
gene_biotype: protein_coding
description:
  Hypothetical protein; High confidence in function and specificity; Belongs to the glycosyl hydrolase 2 family.


ensembl_gene_id: CCDG5_0069
symbol: ydjJ1
gene_biotype: protein_coding
description:
  Putative zinc-type alcohol dehydrogenase-like protein YdjJ; High confidence in function and specificity.


ensembl_gene_id: CCDG5_0074
symbol: CCDG5_0074
gene_biotype: protein_coding
description:
  Integral membrane sensor signal transduction histidine kinase; High confidence in function and specificity.


ensembl_gene_id: CCDG5_0076
symbol: hflX
gene_biotype: protein_coding
description:
  GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: CCDG5_0084
symbol: CCDG5_0084
gene_biotype: protein_coding
description:
  Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; High confidence in function and specificity.


ensembl_gene_id: CCDG5_0089
symbol: metA
gene_biotype: protein_coding
description:
  Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.


ensembl_gene_id: CCDG5_0111
symbol: ytzG
gene_biotype: protein_coding
description:
  Putative RNA pseudouridine synthase YtzG; High confidence in function and specificity; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: CCDG5_0112
symbol: yurJ
gene_biotype: protein_coding
description:
  Putative ABC transporter ATP-binding protein YurJ; High confidence in function and specificity; Belongs to the ABC transporter superfamily.


ensembl_gene_id: CCDG5_0114
symbol: ftsE
gene_biotype: protein_coding
description:
  Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: CCDG5_0115
symbol: CCDG5_0115
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: CCDG5_0117
symbol: CCDG5_0117
gene_biotype: protein_coding
description:
  Hypothetical protein; High confidence in function and specificity; Belongs to the peptidase S41A family.


ensembl_gene_id: CCDG5_0119
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: CCDG5_0120
symbol: lysS
gene_biotype: protein_coding
description:
  Lysine-tRNA ligase; High confidence in function and specificity; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: CCDG5_0127
symbol: bglB
gene_biotype: protein_coding
description:
  Thermostable beta-glucosidase B; High confidence in function and specificity; Belongs to the glycosyl hydrolase 3 family.


ensembl_gene_id: CCDG5_0132
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.


ensembl_gene_id: CCDG5_0133
symbol: CCDG5_0133
gene_biotype: protein_coding
description:
  Hypothetical protein; Family membership; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: CCDG5_0135
symbol: gcp
gene_biotype: protein_coding
description:
  Putative tRNA threonylcarbamoyladenosine biosynthesis protein Gcp; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: CCDG5_0138
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: CCDG5_0140
symbol: CCDG5_0140
gene_biotype: protein_coding
description:
  Amino acid-binding ACT protein; High confidence in function and specificity; Belongs to the UPF0735 family.


ensembl_gene_id: CCDG5_0148
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: CCDG5_0149
symbol: rpsI
gene_biotype: protein_coding
description:
  30S ribosomal protein S9; High confidence in function and specificity; Belongs to the universal ribosomal protein uS9 family.


ensembl_gene_id: CCDG5_0151
symbol: metG
gene_biotype: protein_coding
description:
  Methionine-tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: CCDG5_0159
symbol: CCDG5_0159
gene_biotype: protein_coding
description:
  Transcriptional modulator of MazE/toxin MazF; Toxic component of a type II toxin-antitoxin (TA) system.


ensembl_gene_id: CCDG5_0181
symbol: rpsJ
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: CCDG5_0182
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: CCDG5_0184
symbol: rplW
gene_biotype: protein_coding
description:
  Hypothetical protein; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: CCDG5_0185
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: CCDG5_0186
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: CCDG5_0187
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: CCDG5_0188
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: CCDG5_0189
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: CCDG5_0191
symbol: rpsQ
gene_biotype: protein_coding
description:
  Hypothetical protein; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: CCDG5_0192
symbol: rplN
gene_biotype: protein_coding
description:
  50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: CCDG5_0193
symbol: rplX
gene_biotype: protein_coding
description:
  50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: CCDG5_0194
symbol: rplE
gene_biotype: protein_coding
description:
  50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: CCDG5_0195
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: CCDG5_0196
symbol: rplF
gene_biotype: protein_coding
description:
  50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: CCDG5_0197
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: CCDG5_0198
symbol: rpsE
gene_biotype: protein_coding
description:
  30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: CCDG5_0200
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: CCDG5_0201
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: CCDG5_0202
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: CCDG5_0203
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: CCDG5_0205
symbol: infA
gene_biotype: protein_coding
description:
  Hypothetical protein; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: CCDG5_0206
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: CCDG5_0207
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: CCDG5_0208
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: CCDG5_0209
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: CCDG5_0211
symbol: proS
gene_biotype: protein_coding
description:
  Proline-tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).


ensembl_gene_id: CCDG5_0213
symbol: polC
gene_biotype: protein_coding
description:
  DNA polymerase III PolC-type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: CCDG5_0215
symbol: recA
gene_biotype: protein_coding
description:
  Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: CCDG5_0221
symbol: relA
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: CCDG5_0222
symbol: dtd
gene_biotype: protein_coding
description:
  Hypothetical protein; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: CCDG5_0228
symbol: CCDG5_0228
gene_biotype: protein_coding
description:
  Hypothetical protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: CCDG5_0230
symbol: pduL
gene_biotype: protein_coding
description:
  Phosphate propanoyltransferase; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.


ensembl_gene_id: CCDG5_0233
symbol: CCDG5_0233
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: CCDG5_0242
symbol: aspS1
gene_biotype: protein_coding
description:
  Aspartate-tRNA ligase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: CCDG5_0251
symbol: secA
gene_biotype: protein_coding
description:
  Protein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: CCDG5_0257
symbol: CCDG5_0257
gene_biotype: protein_coding
description:
  Sigma factor; High confidence in function and specificity; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: CCDG5_0264
symbol: fba
gene_biotype: protein_coding
description:
  Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.


ensembl_gene_id: CCDG5_0268
symbol: prmC
gene_biotype: protein_coding
description:
  protein-(glutamine-N5) methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: CCDG5_0271
symbol: CCDG5_0271
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; High confidence in function and specificity.


ensembl_gene_id: CCDG5_0275
symbol: CCDG5_0275
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase; High confidence in function and specificity.


ensembl_gene_id: CCDG5_0276
symbol: larC
gene_biotype: protein_coding
description:
  UPF0272 protein; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family.


ensembl_gene_id: CCDG5_0285
symbol: glnA3-1
gene_biotype: protein_coding
description:
  Type-3 glutamine synthetase; High confidence in function and specificity; Belongs to the glutamine synthetase family.


ensembl_gene_id: CCDG5_0286
symbol: gatB1
gene_biotype: protein_coding
description:
  Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: CCDG5_0287
symbol: gatA1
gene_biotype: protein_coding
description:
  Glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: CCDG5_0288
symbol: gatC
gene_biotype: protein_coding
description:
  Hypothetical protein; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: CCDG5_0298
symbol: recD2
gene_biotype: protein_coding
description:
  Helicase, RecD/TraA family; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.


ensembl_gene_id: CCDG5_0300
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: CCDG5_0301
symbol: CCDG5_0301
gene_biotype: protein_coding
description:
  Hypothetical protein; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family.


ensembl_gene_id: CCDG5_0302
symbol: speD
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 2 subfamily.


ensembl_gene_id: CCDG5_0303
symbol: speE1
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: CCDG5_0316
symbol: CCDG5_0316
gene_biotype: protein_coding
description:
  Hypothetical protein; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: CCDG5_0317
symbol: rsmA
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: CCDG5_0351
symbol: CCDG5_0351
gene_biotype: protein_coding
description:
  Hypothetical protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: CCDG5_0352
symbol: CCDG5_0352
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgC; High confidence in function and specificity; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: CCDG5_0354
symbol: CCDG5_0354
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: CCDG5_0370
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: CCDG5_0372
symbol: CCDG5_0372
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: CCDG5_0373
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: CCDG5_0374
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: CCDG5_0375
symbol: CCDG5_0375
gene_biotype: protein_coding
description:
  RNA polymerase sigma 28 subunit FliA/WhiG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: CCDG5_0383
symbol: fliW
gene_biotype: protein_coding
description:
  Hypothetical protein; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.


ensembl_gene_id: CCDG5_0384
symbol: csrA
gene_biotype: protein_coding
description:
  Hypothetical protein; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.


ensembl_gene_id: CCDG5_0385
symbol: flaB2
gene_biotype: protein_coding
description:
  Flagellar filament 33 kDa core protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: CCDG5_0405
symbol: clpP3
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit 3; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: CCDG5_0407
symbol: cheD
gene_biotype: protein_coding
description:
  Protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: CCDG5_0410
symbol: purE
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: CCDG5_0411
symbol: purC
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole- succinocarboxamidesynthase; High confidence in function and specificity; Belongs to the SAICAR synthetase family.


ensembl_gene_id: CCDG5_0412
symbol: purF
gene_biotype: protein_coding
description:
  Putative amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: CCDG5_0414
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: CCDG5_0415
symbol: CCDG5_0415
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; High confidence in function and specificity; Belongs to the ribose-phosphate pyrophosphokinase family.


ensembl_gene_id: CCDG5_0417
symbol: def2
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: CCDG5_0418
symbol: purD
gene_biotype: protein_coding
description:
  Phosphoribosylamine-glycine ligase; High confidence in function and specificity; Belongs to the GARS family.


ensembl_gene_id: CCDG5_0422
symbol: malK
gene_biotype: protein_coding
description:
  Trehalose/maltose import ATP-binding protein MalK; High confidence in function and specificity; Belongs to the ABC transporter superfamily.


ensembl_gene_id: CCDG5_0427
symbol: CCDG5_0427
gene_biotype: protein_coding
description:
  ABC transporter; High confidence in function and specificity; Belongs to the ABC transporter superfamily.


ensembl_gene_id: CCDG5_0432
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: CCDG5_0440
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: CCDG5_0441
symbol: ywlC
gene_biotype: protein_coding
description:
  Putative tRNA threonylcarbamoyladenosine biosynthesis protein YwlC; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: CCDG5_0442
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: CCDG5_0445
symbol: galE
gene_biotype: protein_coding
description:
  UDP-glucose 4-epimerase; High confidence in function and specificity; Belongs to the NAD(P)-dependent epimerase/dehydratase family.


ensembl_gene_id: CCDG5_0446
symbol: leuA1
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.


ensembl_gene_id: CCDG5_0448
symbol: GPD1
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase 1; High confidence in function and specificity; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: CCDG5_0455
symbol: ypsC
gene_biotype: protein_coding
description:
  Putative RNA methyltransferase YpsC; High confidence in function and specificity; Belongs to the methyltransferase superfamily.


ensembl_gene_id: CCDG5_0456
symbol: groS
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: CCDG5_0457
symbol: groL1
gene_biotype: protein_coding
description:
  60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: CCDG5_0459
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: CCDG5_0461
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: CCDG5_0462
symbol: CCDG5_0462
gene_biotype: protein_coding
description:
  tRNA/rRNA methyltransferase SpoU; High confidence in function and specificity; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: CCDG5_0464
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: CCDG5_0465
symbol: trmFO
gene_biotype: protein_coding
description:
  Methylenetetrahydrofolate-tRNA-(uracil-5-)- methyltransferase TrmFO; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.


ensembl_gene_id: CCDG5_0466
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: CCDG5_0468
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: CCDG5_0470
symbol: smc
gene_biotype: protein_coding
description:
  Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: CCDG5_0471
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: CCDG5_0472
symbol: CCDG5_0472
gene_biotype: protein_coding
description:
  RdgB/HAM1 family non-canonical purine NTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: CCDG5_0474
symbol: nadD
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: CCDG5_0476
symbol: rsfS
gene_biotype: protein_coding
description:
  Iojap family protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: CCDG5_0477
symbol: leuS
gene_biotype: protein_coding
description:
  Leucine-tRNA ligase; High confidence in function and specificity; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: CCDG5_0481
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: CCDG5_0483
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: CCDG5_0488
symbol: mcsB
gene_biotype: protein_coding
description:
  Putative ATP:guanido phosphotransferase TTE2328; Catalyzes the specific phosphorylation of arginine residues in proteins.


ensembl_gene_id: CCDG5_0489
symbol: CLPC2
gene_biotype: protein_coding
description:
  Chaperone protein ClpC2, chloroplastic; High confidence in function and specificity; Belongs to the ClpA/ClpB family.


ensembl_gene_id: CCDG5_0495
symbol: CCDG5_0495
gene_biotype: protein_coding
description:
  Methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase; High confidence in function and specificity.


ensembl_gene_id: CCDG5_0497
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA-specific 2-thiouridylase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: CCDG5_0498
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: CCDG5_0505
symbol: hpf
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: CCDG5_0506
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: CCDG5_0507
symbol: thrS
gene_biotype: protein_coding
description:
  Threonine-tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: CCDG5_0510
symbol: CCDG5_0510
gene_biotype: protein_coding
description:
  Hypothetical protein; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: CCDG5_0511
symbol: CCDG5_0511
gene_biotype: protein_coding
description:
  Ferric uptake regulator, Fur family; High confidence in function and specificity; Belongs to the Fur family.


ensembl_gene_id: CCDG5_0514
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: CCDG5_0515
symbol: proA
gene_biotype: protein_coding
description:
  Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: CCDG5_0529
symbol: glnA
gene_biotype: protein_coding
description:
  Glutamine synthetase; High confidence in function and specificity; Belongs to the glutamine synthetase family.


ensembl_gene_id: CCDG5_0530
symbol: dus1
gene_biotype: protein_coding
description:
  Putative tRNA-dihydrouridine synthase 1; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: CCDG5_0531
symbol: CCDG5_0531
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: CCDG5_0532
symbol: lepA
gene_biotype: protein_coding
description:
  Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: CCDG5_0534
symbol: gpr
gene_biotype: protein_coding
description:
  Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.


ensembl_gene_id: CCDG5_0538
symbol: CCDG5_0538
gene_biotype: protein_coding
description:
  Citrate synthase; High confidence in function and specificity; Belongs to the citrate synthase family.


ensembl_gene_id: CCDG5_0550
symbol: rmlA
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: CCDG5_0552
symbol: CCDG5_0552
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.


ensembl_gene_id: CCDG5_0553
symbol: CCDG5_0553
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: CCDG5_0554
symbol: rfbB
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; High confidence in function and specificity; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: CCDG5_0559
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; High confidence in function and specificity; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: CCDG5_0564
symbol: alaS
gene_biotype: protein_coding
description:
  Alanine-tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: CCDG5_0571
symbol: uxaB
gene_biotype: protein_coding
description:
  Altronate oxidoreductase; High confidence in function and specificity; Belongs to the mannitol dehydrogenase family.


ensembl_gene_id: CCDG5_0579
symbol: CCDG5_0579
gene_biotype: protein_coding
description:
  Cyclophilin type peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: CCDG5_0596
symbol: pheT
gene_biotype: protein_coding
description:
  Phenylalanine-tRNA ligase beta subunit; High confidence in function and specificity; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: CCDG5_0597
symbol: pheS
gene_biotype: protein_coding
description:
  Phenylalanine-tRNA ligase alpha subunit; High confidence in function and specificity; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: CCDG5_0599
symbol: nnrD
gene_biotype: protein_coding
description:
  Carbohydrate kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...]


ensembl_gene_id: CCDG5_0603
symbol: mrnC
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.


ensembl_gene_id: CCDG5_0604
symbol: obg
gene_biotype: protein_coding
description:
  GTPase obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: CCDG5_0607
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: CCDG5_0608
symbol: folD
gene_biotype: protein_coding
description:
  Bifunctional protein FolD; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: CCDG5_0610
symbol: CCDG5_0610
gene_biotype: protein_coding
description:
  Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: CCDG5_0611
symbol: rpsR
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: CCDG5_0615
symbol: nadE
gene_biotype: protein_coding
description:
  NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: CCDG5_0621
symbol: ku
gene_biotype: protein_coding
description:
  Putative DNA repair protein Cphy_1728; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.


ensembl_gene_id: CCDG5_0622
symbol: crcB
gene_biotype: protein_coding
description:
  Putative membrane protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: CCDG5_0628
symbol: CCDG5_0628
gene_biotype: protein_coding
description:
  GntR family transcriptional regulator with LacI sensor; High confidence in function and specificity.


ensembl_gene_id: CCDG5_0632
symbol: CCDG5_0632
gene_biotype: protein_coding
description:
  Peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; High confidence in function and specificity; Belongs to the peptidase S11 family.


ensembl_gene_id: CCDG5_0634
symbol: CCDG5_0634
gene_biotype: protein_coding
description:
  Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; High confidence in function and specificity.


ensembl_gene_id: CCDG5_0639
symbol: CCDG5_0639
gene_biotype: protein_coding
description:
  Indolepyruvate ferredoxin oxidoreductase subunit alpha; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.


ensembl_gene_id: CCDG5_0641
symbol: paaK
gene_biotype: protein_coding
description:
  Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).


ensembl_gene_id: CCDG5_0664
symbol: CCDG5_0664
gene_biotype: protein_coding
description:
  Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; High confidence in function and specificity.


ensembl_gene_id: CCDG5_0665
symbol: CCDG5_0665
gene_biotype: protein_coding
description:
  Putative signal transduction protein with a C-terminal ATPase domain; High confidence in function and specificity.


ensembl_gene_id: CCDG5_0675
symbol: CCDG5_0675
gene_biotype: protein_coding
description:
  Rrf2 family protein, putative transcriptional regulator; High confidence in function and specificity.


ensembl_gene_id: CCDG5_0678
symbol: aspS3
gene_biotype: protein_coding
description:
  Aspartate-tRNA ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: CCDG5_0687
symbol: iscS1
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.


ensembl_gene_id: CCDG5_0688
symbol: rnhA
gene_biotype: protein_coding
description:
  Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family.


ensembl_gene_id: CCDG5_0691
symbol: rnjA
gene_biotype: protein_coding
description:
  Ribonuclease J 1; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: CCDG5_0692
symbol: CCDG5_0692
gene_biotype: protein_coding
description:
  Phosphoesterase RecJ domain-containing protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.


ensembl_gene_id: CCDG5_0694
symbol: dnaC2
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: CCDG5_0695
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: CCDG5_0696
symbol: hprT
gene_biotype: protein_coding
description:
  Hypoxanthine-guanine phosphoribosyltransferase; High confidence in function and specificity; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: CCDG5_0697
symbol: ftsH1
gene_biotype: protein_coding
description:
  ATP-dependent zinc metalloprotease FtsH 1; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: CCDG5_0701
symbol: CCDG5_0701
gene_biotype: protein_coding
description:
  Putative membrane protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: CCDG5_0702
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: CCDG5_0706
symbol: mscL
gene_biotype: protein_coding
description:
  Putative membrane protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: CCDG5_0708
symbol: wbpA
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-glucosamine 6-dehydrogenase; High confidence in function and specificity; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: CCDG5_0710
symbol: CCDG5_0710
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 2-epimerase homolog; High confidence in function and specificity; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: CCDG5_0718
symbol: spsC
gene_biotype: protein_coding
description:
  Spore coat polysaccharide biosynthesis protein SpsC; High confidence in function and specificity; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: CCDG5_0724
symbol: ispD
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: CCDG5_0725
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: CCDG5_0728
symbol: dacA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: CCDG5_0745
symbol: CCDG5_0745
gene_biotype: protein_coding
description:
  EmrB/QacA subfamily drug resistance transporter; High confidence in function and specificity; Belongs to the major facilitator superfamily.


ensembl_gene_id: CCDG5_0754
symbol: potA
gene_biotype: protein_coding
description:
  Spermidine/putrescine import ATP-binding protein PotA; High confidence in function and specificity; Belongs to the ABC transporter superfamily.


ensembl_gene_id: CCDG5_0758
symbol: CCDG5_0758
gene_biotype: protein_coding
description:
  Putative ABC-type transport system, periplasmic component/surface lipoprotein; High confidence in function and specificity.


ensembl_gene_id: CCDG5_0760
symbol: CCDG5_0760
gene_biotype: protein_coding
description:
  Inner-membrane translocator; High confidence in function and specificity; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: CCDG5_0769
symbol: CCDG5_0769
gene_biotype: protein_coding
description:
  Binding-protein-dependent transport system inner membrane protein; High confidence in function and specificity.


ensembl_gene_id: CCDG5_0788
symbol: CCDG5_0788
gene_biotype: protein_coding
description:
  Nitrogen regulatory protein P-II; High confidence in function and specificity; Belongs to the P(II) protein family.


ensembl_gene_id: CCDG5_0792
symbol: gltB
gene_biotype: protein_coding
description:
  Archaeal glutamate synthase [NADPH]; High confidence in function and specificity; Belongs to the glutamate synthase family.


ensembl_gene_id: CCDG5_0799
symbol: pvuIIM
gene_biotype: protein_coding
description:
  Modification methylase PvuII; High confidence in function and specificity; Belongs to the N(4)/N(6)-methyltransferase family.


ensembl_gene_id: CCDG5_0809
symbol: CCDG5_0809
gene_biotype: protein_coding
description:
  Hypothetical protein; High confidence in function and specificity; Belongs to the pyridoxine kinase family.


ensembl_gene_id: CCDG5_0811
symbol: CCDG5_0811
gene_biotype: protein_coding
description:
  MutE/EpiE family lantibiotic protection ABC transporter permease; High confidence in function and specificity.


ensembl_gene_id: CCDG5_0813
symbol: CCDG5_0813
gene_biotype: protein_coding
description:
  Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; High confidence in function and specificity.


ensembl_gene_id: CCDG5_0814
symbol: CCDG5_0814
gene_biotype: protein_coding
description:
  Putative lantibiotic resistance two-component sensor kinase; High confidence in function and specificity.


ensembl_gene_id: CCDG5_0829
symbol: CCDG5_0829
gene_biotype: protein_coding
description:
  Binding-protein-dependent transporters inner membrane component; High confidence in function and specificity.


ensembl_gene_id: CCDG5_0833
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: CCDG5_0837
symbol: CCDG5_0837
gene_biotype: protein_coding
description:
  ABC superfamily ATP binding cassette transporter, membrane protein; High confidence in function and specificity.


ensembl_gene_id: CCDG5_0839
symbol: CCDG5_0839
gene_biotype: protein_coding
description:
  Iron-sulfur cluster assembly transcription factor IscR; High confidence in function and specificity.


ensembl_gene_id: CCDG5_0840
symbol: metN
gene_biotype: protein_coding
description:
  Methionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.


ensembl_gene_id: CCDG5_0842
symbol: CCDG5_0842
gene_biotype: protein_coding
description:
  ABC-type metal ion transport system, periplasmic component/surface antigen; High confidence in function and specificity; Belongs to the nlpA lipoprotein family.


ensembl_gene_id: CCDG5_0845
symbol: CCDG5_0845
gene_biotype: protein_coding
description:
  Nitrogenase molybdenum-iron protein, alpha and beta chains; High confidence in function and specificity; Belongs to the NifD/NifK/NifE/NifN family.


ensembl_gene_id: CCDG5_0850
symbol: nifH4
gene_biotype: protein_coding
description:
  Nitrogenase iron protein 4; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.


ensembl_gene_id: CCDG5_0858
symbol: gdh
gene_biotype: protein_coding
description:
  NADP-specific glutamate dehydrogenase; High confidence in function and specificity; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: CCDG5_0862
symbol: rsmI
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: CCDG5_0863
symbol: CCDG5_0863
gene_biotype: protein_coding
description:
  Methyltransferase small; High confidence in function and specificity; Belongs to the methyltransferase superfamily.


ensembl_gene_id: CCDG5_0864
symbol: CCDG5_0864
gene_biotype: protein_coding
description:
  Hypothetical protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: CCDG5_0869
symbol: CCDG5_0869
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: CCDG5_0873
symbol: coaX
gene_biotype: protein_coding
description:
  Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: CCDG5_0888
symbol: dapL
gene_biotype: protein_coding
description:
  LL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate.


ensembl_gene_id: CCDG5_0889
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: CCDG5_0892
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: CCDG5_0894
symbol: CCDG5_0894
gene_biotype: protein_coding
description:
  Glyoxylate reductase; High confidence in function and specificity; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: CCDG5_0915
symbol: acpP-2
gene_biotype: protein_coding
description:
  Hypothetical protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.


ensembl_gene_id: CCDG5_0927
symbol: CCDG5_0927
gene_biotype: protein_coding
description:
  Hypothetical protein; High confidence in function and specificity; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.


ensembl_gene_id: CCDG5_0938
symbol: CCDG5_0938
gene_biotype: protein_coding
description:
  Hypothetical protein; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: CCDG5_0939
symbol: CCDG5_0939
gene_biotype: protein_coding
description:
  Stress responsive alpha-beta barrel domain-containing protein; High confidence in function and specificity.


ensembl_gene_id: CCDG5_0941
symbol: CCDG5_0941
gene_biotype: protein_coding
description:
  HAD-superfamily hydrolase; Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro; Belongs to the HAD-like hydrolase superfamily. NagD family.


ensembl_gene_id: CCDG5_0949
symbol: hypA
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.


ensembl_gene_id: CCDG5_0953
symbol: punA
gene_biotype: protein_coding
description:
  Purine nucleoside phosphorylase 1; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: CCDG5_0954
symbol: add
gene_biotype: protein_coding
description:
  Adenosine deaminase; High confidence in function and specificity; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family. Adenosine deaminase subfamily.


ensembl_gene_id: CCDG5_0958
symbol: CCDG5_0958
gene_biotype: protein_coding
description:
  PP-loop domain-containing protein; High confidence in function and specificity; Belongs to the TtcA family.


ensembl_gene_id: CCDG5_0964
symbol: hprK
gene_biotype: protein_coding
description:
  HPr kinase/phosphorylase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon [...]


ensembl_gene_id: CCDG5_0972
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: CCDG5_0980
symbol: spo0A
gene_biotype: protein_coding
description:
  Stage 0 sporulation protein A homolog; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.


ensembl_gene_id: CCDG5_0991
symbol: sodF
gene_biotype: protein_coding
description:
  Putative superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: CCDG5_0993
symbol: hslO
gene_biotype: protein_coding
description:
  33 kDa chaperonin; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.


ensembl_gene_id: CCDG5_0997
symbol: CCDG5_0997
gene_biotype: protein_coding
description:
  Chromosome segregation and condensation protein ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: CCDG5_0998
symbol: scpB
gene_biotype: protein_coding
description:
  Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: CCDG5_1001
symbol: CCDG5_1001
gene_biotype: protein_coding
description:
  Pseudouridine synthase; High confidence in function and specificity; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: CCDG5_1003
symbol: pyrR
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.


ensembl_gene_id: CCDG5_1004
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: CCDG5_1005
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase; High confidence in function and specificity; Belongs to the OMP decarboxylase family. Type 2 subfamily.


ensembl_gene_id: CCDG5_1006
symbol: carA
gene_biotype: protein_coding
description:
  Carbamoyl-phosphate synthase small chain; High confidence in function and specificity; Belongs to the CarA family.


ensembl_gene_id: CCDG5_1007
symbol: carB
gene_biotype: protein_coding
description:
  Carbamoyl-phosphate synthase large chain; High confidence in function and specificity; Belongs to the CarB family.


ensembl_gene_id: CCDG5_1008
symbol: CCDG5_1008
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain; High confidence in function and specificity.


ensembl_gene_id: CCDG5_1009
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate.


ensembl_gene_id: CCDG5_1011
symbol: CCDG5_1011
gene_biotype: protein_coding
description:
  Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: CCDG5_1016
symbol: CCDG5_1016
gene_biotype: protein_coding
description:
  Bifunctional folylpolyglutamate synthase/ dihydrofolate synthase; High confidence in function and specificity; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: CCDG5_1018
symbol: spoIIAB
gene_biotype: protein_coding
description:
  Anti-sigma regulatory factor, serine/threonine protein kinase; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.


ensembl_gene_id: CCDG5_1019
symbol: CCDG5_1019
gene_biotype: protein_coding
description:
  sigma-B/F/G subfamily RNA polymerase sigma-28 factor; High confidence in function and specificity; Belongs to the sigma-70 factor family.


ensembl_gene_id: CCDG5_1025
symbol: mprF
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.


ensembl_gene_id: CCDG5_1026
symbol: CCDG5_1026
gene_biotype: protein_coding
description:
  WecB/TagA/CpsF family glycosyl transferase; High confidence in function and specificity; Belongs to the glycosyltransferase 26 family.


ensembl_gene_id: CCDG5_1027
symbol: thyX
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: CCDG5_1031
symbol: hisZ
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase regulatory subunit; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.


ensembl_gene_id: CCDG5_1032
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: CCDG5_1033
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: CCDG5_1034
symbol: hisC
gene_biotype: protein_coding
description:
  Class I and II aminotransferase; High confidence in function and specificity; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: CCDG5_1036
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: CCDG5_1037
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; High confidence in function and specificity.


ensembl_gene_id: CCDG5_1038
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: CCDG5_1039
symbol: CCDG5_1039
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP; Belongs to the PRA-CH family.


ensembl_gene_id: CCDG5_1050
symbol: nusB
gene_biotype: protein_coding
description:
  NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: CCDG5_1052
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease 7 large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: CCDG5_1053
symbol: xseB
gene_biotype: protein_coding
description:
  Hypothetical protein; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: CCDG5_1054
symbol: GGPPS1
gene_biotype: protein_coding
description:
  Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic; High confidence in function and specificity; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: CCDG5_1055
symbol: CCDG5_1055
gene_biotype: protein_coding
description:
  Acid phosphatase/vanadium-dependent haloperoxidase related protein; High confidence in function and specificity.


ensembl_gene_id: CCDG5_1056
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: CCDG5_1058
symbol: nadK
gene_biotype: protein_coding
description:
  ATP-NAD/AcoX kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: CCDG5_1061
symbol: tyrS
gene_biotype: protein_coding
description:
  Tyrosine-tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: CCDG5_1066
symbol: CCDG5_1066
gene_biotype: protein_coding
description:
  Hypothetical protein; Family membership; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: CCDG5_1068
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA homolog; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: CCDG5_1073
symbol: xerC
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerC; High confidence in function and specificity; Belongs to the 'phage' integrase family.


ensembl_gene_id: CCDG5_1075
symbol: xerD
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: CCDG5_1077
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: CCDG5_1082
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: CCDG5_1083
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: CCDG5_1084
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; High confidence in function and specificity; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: CCDG5_1085
symbol: dapA
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: CCDG5_1086
symbol: dapB
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: CCDG5_1090
symbol: coaX-2
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: CCDG5_1091
symbol: CCDG5_1091
gene_biotype: protein_coding
description:
  ybaK/ebsC protein; High confidence in function and specificity; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.


ensembl_gene_id: CCDG5_1092
symbol: uvrA
gene_biotype: protein_coding
description:
  UvrABC system protein A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: CCDG5_1093
symbol: uvrB
gene_biotype: protein_coding
description:
  UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...]


ensembl_gene_id: CCDG5_1094
symbol: CCDG5_1094
gene_biotype: protein_coding
description:
  DNA repair protein RadC; High confidence in function and specificity; Belongs to the UPF0758 family.


ensembl_gene_id: CCDG5_1095
symbol: CCDG5_1095
gene_biotype: protein_coding
description:
  Hypothetical protein; High confidence in function and specificity; Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: CCDG5_1099
symbol: ispH
gene_biotype: protein_coding
description:
  Hydroxymethylbutenyl pyrophosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: CCDG5_1100
symbol: CCDG5_1100
gene_biotype: protein_coding
description:
  Hypothetical protein; Family membership; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.


ensembl_gene_id: CCDG5_1104
symbol: hppA
gene_biotype: protein_coding
description:
  K(+)-insensitive pyrophosphate-energized proton pump; Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force.


ensembl_gene_id: CCDG5_1112
symbol: ilvD
gene_biotype: protein_coding
description:
  Dihydroxy-acid dehydratase; High confidence in function and specificity; Belongs to the IlvD/Edd family.


ensembl_gene_id: CCDG5_1113
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: CCDG5_1114
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.


ensembl_gene_id: CCDG5_1115
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: CCDG5_1116
symbol: CCDG5_1116
gene_biotype: protein_coding
description:
  Putative AIPM/Hcit synthase family transferase aq_356; High confidence in function and specificity; Belongs to the alpha-IPM synthase/homocitrate synthase family.


ensembl_gene_id: CCDG5_1117
symbol: leuA3
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: CCDG5_1118
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: CCDG5_1122
symbol: glmS
gene_biotype: protein_coding
description:
  Glutamine-fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: CCDG5_1127
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: CCDG5_1128
symbol: engB
gene_biotype: protein_coding
description:
  HSR1-like GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: CCDG5_1129
symbol: lon
gene_biotype: protein_coding
description:
  Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: CCDG5_1130
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: CCDG5_1131
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: CCDG5_1132
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: CCDG5_1138
symbol: rbgA
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase A; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: CCDG5_1140
symbol: rplS
gene_biotype: protein_coding
description:
  Hypothetical protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: CCDG5_1145
symbol: CCDG5_1145
gene_biotype: protein_coding
description:
  Putative UDP-N-acetylglucosamine 2-epimerase; High confidence in function and specificity; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: CCDG5_1154
symbol: pncB
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: CCDG5_1160
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: CCDG5_1162
symbol: fabV
gene_biotype: protein_coding
description:
  Putative reductase Ccel_2273; Involved in the fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon-carbon double bond in an enoyl moiety that is covalently linked to a coenzyme A (CoA); Belongs to the TER reductase family.


ensembl_gene_id: CCDG5_1173
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: CCDG5_1179
symbol: tadA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: CCDG5_1183
symbol: gpmI
gene_biotype: protein_coding
description:
  2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: CCDG5_1184
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: CCDG5_1185
symbol: pgk
gene_biotype: protein_coding
description:
  Phosphoglycerate kinase; High confidence in function and specificity; Belongs to the phosphoglycerate kinase family.


ensembl_gene_id: CCDG5_1186
symbol: CCDG5_1186
gene_biotype: protein_coding
description:
  Hypothetical protein; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.


ensembl_gene_id: CCDG5_1191
symbol: CCDG5_1191
gene_biotype: protein_coding
description:
  Putative RNA methyltransferase CTC_02481; High confidence in function and specificity; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: CCDG5_1198
symbol: sfsA
gene_biotype: protein_coding
description:
  Sugar fermentation stimulation protein homolog; High confidence in function and specificity; Belongs to the SfsA family.


ensembl_gene_id: CCDG5_1204
symbol: CCDG5_1204
gene_biotype: protein_coding
description:
  Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein; High confidence in function and specificity.


ensembl_gene_id: CCDG5_1219
symbol: rplU
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: CCDG5_1220
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: CCDG5_1223
symbol: iorA
gene_biotype: protein_coding
description:
  Indolepyruvate oxidoreductase subunit IorA; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.


ensembl_gene_id: CCDG5_1225
symbol: ykfD
gene_biotype: protein_coding
description:
  Putative oligopeptide transport ATP-binding protein YkfD; High confidence in function and specificity; Belongs to the ABC transporter superfamily.


ensembl_gene_id: CCDG5_1226
symbol: oppD
gene_biotype: protein_coding
description:
  Oligopeptide transport ATP-binding protein OppD; High confidence in function and specificity; Belongs to the ABC transporter superfamily.


ensembl_gene_id: CCDG5_1236
symbol: spoIVA
gene_biotype: protein_coding
description:
  Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.


ensembl_gene_id: CCDG5_1241
symbol: CCDG5_1241
gene_biotype: protein_coding
description:
  FAD-dependent pyridine nucleotide-disulphide oxidoreductase; High confidence in function and specificity.


ensembl_gene_id: CCDG5_1243
symbol: mntH
gene_biotype: protein_coding
description:
  Divalent metal cation transporter MntH; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.


ensembl_gene_id: CCDG5_1245
symbol: pdxS
gene_biotype: protein_coding
description:
  Pyridoxal biosynthesis lyase PdxS; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.


ensembl_gene_id: CCDG5_1246
symbol: pdxT
gene_biotype: protein_coding
description:
  Glutamine amidotransferase subunit PdxT; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.


ensembl_gene_id: CCDG5_1261
symbol: CCDG5_1261
gene_biotype: protein_coding
description:
  Cyclomaltodextrinase; High confidence in function and specificity; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: CCDG5_1262
symbol: amyA
gene_biotype: protein_coding
description:
  Cyclomaltodextrin glucanotransferase; High confidence in function and specificity; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: CCDG5_1263
symbol: azoR
gene_biotype: protein_coding
description:
  FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.


ensembl_gene_id: CCDG5_1275
symbol: fhs
gene_biotype: protein_coding
description:
  Formate-tetrahydrofolate ligase; High confidence in function and specificity; Belongs to the formate--tetrahydrofolate ligase family.


ensembl_gene_id: CCDG5_1279
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: CCDG5_1287
symbol: rsgA
gene_biotype: protein_coding
description:
  Putative ribosome biogenesis GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: CCDG5_1290
symbol: rlmN
gene_biotype: protein_coding
description:
  Putative dual-specificity RNA methyltransferase RlmN; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: CCDG5_1293
symbol: fmt
gene_biotype: protein_coding
description:
  Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: CCDG5_1295
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: CCDG5_1296
symbol: rpoZ
gene_biotype: protein_coding
description:
  Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: CCDG5_1300
symbol: yngB
gene_biotype: protein_coding
description:
  Putative UTP-glucose-1-phosphate uridylyltransferase YngB; High confidence in function and specificity.


ensembl_gene_id: CCDG5_1307
symbol: yacO
gene_biotype: protein_coding
description:
  Putative TrmH family tRNA/rRNA methyltransferase YacO; High confidence in function and specificity; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: CCDG5_1308
symbol: udp
gene_biotype: protein_coding
description:
  Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the PNP/UDP phosphorylase family.


ensembl_gene_id: CCDG5_1312
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: CCDG5_1314
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: CCDG5_1316
symbol: mraY
gene_biotype: protein_coding
description:
  Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: CCDG5_1317
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: CCDG5_1318
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: CCDG5_1321
symbol: rsmH
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: CCDG5_1324
symbol: coaD
gene_biotype: protein_coding
description:
  Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: CCDG5_1326
symbol: uvrC
gene_biotype: protein_coding
description:
  UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: CCDG5_1329
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: CCDG5_1330
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: CCDG5_1333
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: CCDG5_1334
symbol: CCDG5_1334
gene_biotype: protein_coding
description:
  Hypothetical protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.


ensembl_gene_id: CCDG5_1335
symbol: atpD
gene_biotype: protein_coding
description:
  V-type ATPase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: CCDG5_1336
symbol: atpB2
gene_biotype: protein_coding
description:
  V-type ATP synthase beta chain 2; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.


ensembl_gene_id: CCDG5_1337
symbol: atpA
gene_biotype: protein_coding
description:
  V-type ATP synthase alpha chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: CCDG5_1341
symbol: CCDG5_1341
gene_biotype: protein_coding
description:
  V-type ATPase 116 kDa subunit; High confidence in function and specificity; Belongs to the V-ATPase 116 kDa subunit family.


ensembl_gene_id: CCDG5_1346
symbol: CCDG5_1346
gene_biotype: protein_coding
description:
  HisJ family histidinol phosphate phosphatase; High confidence in function and specificity; Belongs to the PHP hydrolase family. HisK subfamily.


ensembl_gene_id: CCDG5_1351
symbol: CCDG5_1351
gene_biotype: protein_coding
description:
  Putative transposase for insertion sequence element; Required for the transposition of the insertion element.


ensembl_gene_id: CCDG5_1358
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: CCDG5_1359
symbol: tmcAL
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.


ensembl_gene_id: CCDG5_1370
symbol: ispE
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: CCDG5_1375
symbol: serC
gene_biotype: protein_coding
description:
  Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.


ensembl_gene_id: CCDG5_1376
symbol: CCDG5_1376
gene_biotype: protein_coding
description:
  D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; High confidence in function and specificity; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: CCDG5_1384
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase [NAD(P)+]; High confidence in function and specificity; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: CCDG5_1385
symbol: plsY
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: CCDG5_1386
symbol: der
gene_biotype: protein_coding
description:
  GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: CCDG5_1391
symbol: pgiA
gene_biotype: protein_coding
description:
  Glucose-6-phosphate isomerase A; High confidence in function and specificity; Belongs to the GPI family.


ensembl_gene_id: CCDG5_1392
symbol: CCDG5_1392
gene_biotype: protein_coding
description:
  Serine-type D-Ala-D-Ala carboxypeptidase; High confidence in function and specificity; Belongs to the peptidase S11 family.


ensembl_gene_id: CCDG5_1407
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: CCDG5_1413
symbol: pdxA
gene_biotype: protein_coding
description:
  4-hydroxythreonine-4-phosphate dehydrogenase; High confidence in function and specificity; Belongs to the PdxA family.


ensembl_gene_id: CCDG5_1414
symbol: lexA
gene_biotype: protein_coding
description:
  Hypothetical protein; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: CCDG5_1419
symbol: CCDG5_1419
gene_biotype: protein_coding
description:
  Putative metal transport system ATP-binding protein TP_0035; High confidence in function and specificity.


ensembl_gene_id: CCDG5_1420
symbol: CCDG5_1420
gene_biotype: protein_coding
description:
  Putative metal transport system membrane protein TP_0036; High confidence in function and specificity.


ensembl_gene_id: CCDG5_1425
symbol: CCDG5_1425
gene_biotype: protein_coding
description:
  Isoaspartyl dipeptidase IadA; Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation. Belongs to the peptidase M38 family.


ensembl_gene_id: CCDG5_1438
symbol: clpC
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpC; High confidence in function and specificity; Belongs to the ClpA/ClpB family.


ensembl_gene_id: CCDG5_1439
symbol: CCDG5_1439
gene_biotype: protein_coding
description:
  CDP-alcohol phosphatidyltransferase; High confidence in function and specificity; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: CCDG5_1443
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: CCDG5_1444
symbol: ecfT
gene_biotype: protein_coding
description:
  Energy-coupling factor transporter transmembrane protein EcfT; High confidence in function and specificity.


ensembl_gene_id: CCDG5_1445
symbol: ecfA1
gene_biotype: protein_coding
description:
  Energy-coupling factor transporter ATP-binding protein EcfA 1; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: CCDG5_1446
symbol: ecfA2
gene_biotype: protein_coding
description:
  Energy-coupling factor transporter ATP-binding protein EcfA 2; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: CCDG5_1448
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: CCDG5_1449
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: CCDG5_1450
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: CCDG5_1451
symbol: ruvC
gene_biotype: protein_coding
description:
  Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: CCDG5_1452
symbol: CCDG5_1452
gene_biotype: protein_coding
description:
  Deoxyguanosinetriphosphate triphosphohydrolase; High confidence in function and specificity; Belongs to the dGTPase family. Type 2 subfamily.


ensembl_gene_id: CCDG5_1453
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair-coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: CCDG5_1454
symbol: pth
gene_biotype: protein_coding
description:
  Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: CCDG5_1455
symbol: glmU
gene_biotype: protein_coding
description:
  Bifunctional protein GlmU; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: CCDG5_1456
symbol: ppdK
gene_biotype: protein_coding
description:
  Pyruvate, phosphate dikinase; High confidence in function and specificity; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: CCDG5_1465
symbol: engD
gene_biotype: protein_coding
description:
  GTP-dependent nucleic acid-binding protein EngD; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: CCDG5_1474
symbol: ldh
gene_biotype: protein_coding
description:
  L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.


ensembl_gene_id: CCDG5_1478
symbol: cobB
gene_biotype: protein_coding
description:
  NAD-dependent protein deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.


ensembl_gene_id: CCDG5_1484
symbol: dinB1
gene_biotype: protein_coding
description:
  DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: CCDG5_1485
symbol: wbpE
gene_biotype: protein_coding
description:
  UDP-2-acetamido-2-deoxy-3-oxo-D- glucuronateaminotransferase; High confidence in function and specificity; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: CCDG5_1487
symbol: rplL
gene_biotype: protein_coding
description:
  Hypothetical protein; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: CCDG5_1488
symbol: rplJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: CCDG5_1489
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: CCDG5_1490
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: CCDG5_1491
symbol: nusG
gene_biotype: protein_coding
description:
  NusG antitermination factor; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: CCDG5_1492
symbol: secE
gene_biotype: protein_coding
description:
  Hypothetical protein; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: CCDG5_1494
symbol: valS
gene_biotype: protein_coding
description:
  Valine-tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: CCDG5_1506
symbol: CCDG5_1506
gene_biotype: protein_coding
description:
  Protein tyrosine phosphatase; High confidence in function and specificity; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: CCDG5_1524
symbol: CCDG5_1524
gene_biotype: protein_coding
description:
  HsdR family type I site-specific deoxyribonuclease; Subunit R is required for both nuclease and ATPase activities, but not for modification.


ensembl_gene_id: CCDG5_1531
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: CCDG5_1532
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: CCDG5_1533
symbol: trpF
gene_biotype: protein_coding
description:
  Phosphoribosylanthranilate isomerase; High confidence in function and specificity; Belongs to the TrpF family.


ensembl_gene_id: CCDG5_1534
symbol: trpC
gene_biotype: protein_coding
description:
  Indole-3-glycerol phosphate synthase; High confidence in function and specificity; Belongs to the TrpC family.


ensembl_gene_id: CCDG5_1535
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: CCDG5_1537
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase component 1; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...]


ensembl_gene_id: CCDG5_1555
symbol: CCDG5_1555
gene_biotype: protein_coding
description:
  Quorum-sensing autoinducer 2 (AI-2), LuxS; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family.


ensembl_gene_id: CCDG5_1556
symbol: murA3
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: CCDG5_1558
symbol: rlmH
gene_biotype: protein_coding
description:
  Hypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: CCDG5_1565
symbol: tal
gene_biotype: protein_coding
description:
  Putative transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: CCDG5_1566
symbol: CCDG5_1566
gene_biotype: protein_coding
description:
  MTA/SAH nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.


ensembl_gene_id: CCDG5_1567
symbol: CCDG5_1567
gene_biotype: protein_coding
description:
  ParA/MinD-like ATPase; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: CCDG5_1568
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: CCDG5_1570
symbol: aroK
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: CCDG5_1571
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: CCDG5_1573
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase 3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: CCDG5_1574
symbol: fabG3
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase FabG; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: CCDG5_1575
symbol: fabF
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: CCDG5_1576
symbol: CCDG5_1576
gene_biotype: protein_coding
description:
  Hypothetical protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: CCDG5_1578
symbol: accC1
gene_biotype: protein_coding
description:
  Biotin carboxylase 1; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: CCDG5_1579
symbol: accD
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: CCDG5_1580
symbol: accA
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: CCDG5_1585
symbol: ylyB
gene_biotype: protein_coding
description:
  Putative RNA pseudouridine synthase YlyB; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: CCDG5_1586
symbol: lspA
gene_biotype: protein_coding
description:
  Putative membrane protein; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: CCDG5_1587
symbol: ileS
gene_biotype: protein_coding
description:
  Isoleucine-tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: CCDG5_1591
symbol: sepF
gene_biotype: protein_coding
description:
  Hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.


ensembl_gene_id: CCDG5_1592
symbol: CCDG5_1592
gene_biotype: protein_coding
description:
  UPF0001 protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: CCDG5_1594
symbol: hfq
gene_biotype: protein_coding
description:
  Hypothetical protein; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: CCDG5_1595
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: CCDG5_1596
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: CCDG5_1597
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: CCDG5_1599
symbol: miaB
gene_biotype: protein_coding
description:
  (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: CCDG5_1610
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: CCDG5_1611
symbol: ADH2
gene_biotype: protein_coding
description:
  Aldehyde-alcohol dehydrogenase 2; High confidence in function and specificity; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.


ensembl_gene_id: CCDG5_1612
symbol: rex
gene_biotype: protein_coding
description:
  Rex DNA-binding domain-containing protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: CCDG5_1620
symbol: CCDG5_1620
gene_biotype: protein_coding
description:
  Hypothetical protein; High confidence in function and specificity; Belongs to the glycosyl hydrolase 43 family.


ensembl_gene_id: CCDG5_1625
symbol: CCDG5_1625
gene_biotype: protein_coding
description:
  Putative membrane protein; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins.


ensembl_gene_id: CCDG5_1634
symbol: dnaJ
gene_biotype: protein_coding
description:
  Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]


ensembl_gene_id: CCDG5_1636
symbol: grpE
gene_biotype: protein_coding
description:
  Hypothetical protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dep [...]


ensembl_gene_id: CCDG5_1637
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: CCDG5_1641
symbol: mltG
gene_biotype: protein_coding
description:
  Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.


ensembl_gene_id: CCDG5_1642
symbol: CCDG5_1642
gene_biotype: protein_coding
description:
  Hypothetical protein; Family membership; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.


ensembl_gene_id: CCDG5_1644
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: CCDG5_1646
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: CCDG5_1647
symbol: CCDG5_1647
gene_biotype: protein_coding
description:
  Phosphatidate cytidylyltransferase; High confidence in function and specificity; Belongs to the CDS family.


ensembl_gene_id: CCDG5_1648
symbol: uppS
gene_biotype: protein_coding
description:
  Isoprenyl transferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: CCDG5_1649
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: CCDG5_1651
symbol: tsf
gene_biotype: protein_coding
description:
  Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: CCDG5_1652
symbol: rpsB
gene_biotype: protein_coding
description:
  30S ribosomal protein S2; High confidence in function and specificity; Belongs to the universal ribosomal protein uS2 family.


ensembl_gene_id: CCDG5_1653
symbol: CCDG5_1653
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; High confidence in function and specificity; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: CCDG5_1656
symbol: CCDG5_1656
gene_biotype: protein_coding
description:
  Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: CCDG5_1658
symbol: amyD
gene_biotype: protein_coding
description:
  Putative starch degradation products transport system permease protein AmyD; High confidence in function and specificity.


ensembl_gene_id: CCDG5_1660
symbol: sigG
gene_biotype: protein_coding
description:
  RNA polymerase sigma-G factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: CCDG5_1661
symbol: sigE
gene_biotype: protein_coding
description:
  RNA polymerase sigma-E factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: CCDG5_1662
symbol: CCDG5_1662
gene_biotype: protein_coding
description:
  sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.


ensembl_gene_id: CCDG5_1664
symbol: tuf
gene_biotype: protein_coding
description:
  Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: CCDG5_1665
symbol: fusA
gene_biotype: protein_coding
description:
  Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: CCDG5_1666
symbol: rpsG
gene_biotype: protein_coding
description:
  30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: CCDG5_1667
symbol: rpsL
gene_biotype: protein_coding
description:
  30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: CCDG5_1668
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: CCDG5_1671
symbol: sigA
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: CCDG5_1672
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: CCDG5_1673
symbol: cysK1
gene_biotype: protein_coding
description:
  Cysteine synthase; High confidence in function and specificity; Belongs to the cysteine synthase/cystathionine beta- synthase family.


ensembl_gene_id: CCDG5_1682
symbol: cysS
gene_biotype: protein_coding
description:
  Cysteine-tRNA ligase; High confidence in function and specificity; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: CCDG5_1684
symbol: CCDG5_1684
gene_biotype: protein_coding
description:
  CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; High confidence in function and specificity; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: CCDG5_1685
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: CCDG5_1687
symbol: mutS2
gene_biotype: protein_coding
description:
  MutS2 protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: CCDG5_1689
symbol: era
gene_biotype: protein_coding
description:
  GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: CCDG5_1691
symbol: ybeY
gene_biotype: protein_coding
description:
  Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: CCDG5_1697
symbol: cysK3
gene_biotype: protein_coding
description:
  O-acetylserine sulfhydrylase; High confidence in function and specificity; Belongs to the cysteine synthase/cystathionine beta- synthase family.


ensembl_gene_id: CCDG5_1699
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: CCDG5_1709
symbol: argF
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: CCDG5_1710
symbol: argD
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase; High confidence in function and specificity; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: CCDG5_1711
symbol: argB
gene_biotype: protein_coding
description:
  Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: CCDG5_1712
symbol: argJ
gene_biotype: protein_coding
description:
  Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: CCDG5_1713
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: CCDG5_1715
symbol: argG
gene_biotype: protein_coding
description:
  Argininosuccinate synthase; High confidence in function and specificity; Belongs to the argininosuccinate synthase family. Type 1 subfamily.


ensembl_gene_id: CCDG5_1720
symbol: pckG
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase; Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family.


ensembl_gene_id: CCDG5_1721
symbol: gltX
gene_biotype: protein_coding
description:
  Glutamate-tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).


ensembl_gene_id: CCDG5_1723
symbol: trpS
gene_biotype: protein_coding
description:
  Tryptophan-tRNA ligase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: CCDG5_1730
symbol: CCDG5_1730
gene_biotype: protein_coding
description:
  Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein; High confidence in function and specificity.


ensembl_gene_id: CCDG5_1782
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine-D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: CCDG5_1784
symbol: cinA
gene_biotype: protein_coding
description:
  Putative competence-damage inducible protein; High confidence in function and specificity; Belongs to the CinA family.


ensembl_gene_id: CCDG5_1785
symbol: thiI
gene_biotype: protein_coding
description:
  Putative tRNA sulfurtransferase; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.


ensembl_gene_id: CCDG5_1798
symbol: glyQS
gene_biotype: protein_coding
description:
  Glycine-tRNA ligase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: CCDG5_1803
symbol: CCDG5_1803
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: CCDG5_1805
symbol: cheB2
gene_biotype: protein_coding
description:
  Chemotaxis response regulator protein-glutamate methylesterase 2; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: CCDG5_1808
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: CCDG5_1809
symbol: CCDG5_1809
gene_biotype: protein_coding
description:
  Hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: CCDG5_1810
symbol: CCDG5_1810
gene_biotype: protein_coding
description:
  Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.


ensembl_gene_id: CCDG5_1812
symbol: sbcD
gene_biotype: protein_coding
description:
  Hypothetical protein; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: CCDG5_1819
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: CCDG5_1820
symbol: CCDG5_1820
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: CCDG5_1821
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: CCDG5_1829
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: CCDG5_1830
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: CCDG5_1831
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: CCDG5_1838
symbol: ispD2
gene_biotype: protein_coding
description:
  Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). Belongs to the IspD/TarI cytidylyltransferase family. TarI subfamily.


ensembl_gene_id: CCDG5_1845
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate synthase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: CCDG5_1846
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: CCDG5_1847
symbol: thiC
gene_biotype: protein_coding
description:
  Phosphomethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.


ensembl_gene_id: CCDG5_1853
symbol: CCDG5_1853
gene_biotype: protein_coding
description:
  Carbohydrate ABC transporter substrate-binding protein; High confidence in function and specificity.


ensembl_gene_id: CCDG5_1855
symbol: CCDG5_1855
gene_biotype: protein_coding
description:
  ABC-type polysaccharide transport system, permease component; High confidence in function and specificity.


ensembl_gene_id: CCDG5_1872
symbol: plsY-2
gene_biotype: protein_coding
description:
  Putative membrane protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: CCDG5_1883
symbol: pyk
gene_biotype: protein_coding
description:
  Pyruvate kinase; High confidence in function and specificity; Belongs to the pyruvate kinase family.


ensembl_gene_id: CCDG5_1890
symbol: rnfD
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: CCDG5_1891
symbol: rnfC
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.


ensembl_gene_id: CCDG5_1893
symbol: RPE
gene_biotype: protein_coding
description:
  Ribulose-phosphate 3-epimerase, chloroplastic; High confidence in function and specificity; Belongs to the ribulose-phosphate 3-epimerase family.


ensembl_gene_id: CCDG5_1896
symbol: nadC
gene_biotype: protein_coding
description:
  Putative nicotinate-nucleotide pyrophosphorylase; High confidence in function and specificity; Belongs to the NadC/ModD family.


ensembl_gene_id: CCDG5_1912
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: CCDG5_1923
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: CCDG5_1928
symbol: CCDG5_1928
gene_biotype: protein_coding
description:
  Hypothetical protein; High confidence in function and specificity; Belongs to the P-Pant transferase superfamily.


ensembl_gene_id: CCDG5_1938
symbol: CCDG5_1938
gene_biotype: protein_coding
description:
  Glycerate kinase; High confidence in function and specificity; Belongs to the glycerate kinase type-1 family.


ensembl_gene_id: CCDG5_1952
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: CCDG5_1957
symbol: rpsO
gene_biotype: protein_coding
description:
  Hypothetical protein; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: CCDG5_1958
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: CCDG5_1981
symbol: sigK
gene_biotype: protein_coding
description:
  RNA polymerase sigma-28 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: CCDG5_1985
symbol: uxuB
gene_biotype: protein_coding
description:
  Putative oxidoreductase UxuB; High confidence in function and specificity; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: CCDG5_1988
symbol: CCDG5_1988
gene_biotype: protein_coding
description:
  Glutamine-fructose-6-phosphate transaminase (isomerizing); High confidence in function and specificity.


ensembl_gene_id: CCDG5_1999
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated Cas2 family protein; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: CCDG5_2000
symbol: cas1-2
gene_biotype: protein_coding
description:
  CRISPR-associated endonuclease Cas1 2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: CCDG5_2007
symbol: GER1
gene_biotype: protein_coding
description:
  GDP-L-fucose synthase 1; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.


ensembl_gene_id: CCDG5_2008
symbol: Gmd
gene_biotype: protein_coding
description:
  GDP-mannose 4,6 dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.


ensembl_gene_id: CCDG5_2014
symbol: CCDG5_2014
gene_biotype: protein_coding
description:
  Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit; High confidence in function and specificity.


ensembl_gene_id: CCDG5_2017
symbol: CCDG5_2017
gene_biotype: protein_coding
description:
  Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; High confidence in function and specificity.


ensembl_gene_id: CCDG5_2018
symbol: CCDG5_2018
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the reversible epimerization of cellobiose to 4-O- beta-D-glucopyranosyl-D-mannose (Glc-Man).


ensembl_gene_id: CCDG5_2026
symbol: yicI
gene_biotype: protein_coding
description:
  Alpha-xylosidase; High confidence in function and specificity; Belongs to the glycosyl hydrolase 31 family.


ensembl_gene_id: CCDG5_2032
symbol: CCDG5_2032
gene_biotype: protein_coding
description:
  D-xylose ABC transporter periplasmic substrate-binding protein; High confidence in function and specificity.


ensembl_gene_id: CCDG5_2038
symbol: CCDG5_2038
gene_biotype: protein_coding
description:
  ABC-type xylose transport system, permease component; High confidence in function and specificity; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: CCDG5_2044
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: CCDG5_2050
symbol: azoR2
gene_biotype: protein_coding
description:
  FMN-dependent NADH-azoreductase 2; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.


ensembl_gene_id: CCDG5_2070
symbol: CCDG5_2070
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibF; High confidence in function and specificity; Belongs to the ribF family.


ensembl_gene_id: CCDG5_2071
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: CCDG5_2073
symbol: rbfA
gene_biotype: protein_coding
description:
  Hypothetical protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: CCDG5_2074
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: CCDG5_2077
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription elongation protein NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: CCDG5_2078
symbol: rimP
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: CCDG5_2080
symbol: serS
gene_biotype: protein_coding
description:
  Serine-tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: CCDG5_2081
symbol: spo0J
gene_biotype: protein_coding
description:
  Stage 0 sporulation protein J; High confidence in function and specificity; Belongs to the ParB family.


ensembl_gene_id: CCDG5_2083
symbol: noc
gene_biotype: protein_coding
description:
  Nucleoid occlusion protein; High confidence in function and specificity; Belongs to the ParB family.


ensembl_gene_id: CCDG5_2084
symbol: rsmG
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: CCDG5_2085
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: CCDG5_2086
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase MnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: CCDG5_2087
symbol: CCDG5_2087
gene_biotype: protein_coding
description:
  Single-stranded nucleic acid binding R3H domain-containing protein; High confidence in function and specificity.


# pathwayInfo

id: CL:100
description: Small ribosomal subunit, and K Homology domain, type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:100_Small_ribosomal_subunit,_and_K_Homology_domain,_type_2


id: CL:1020
description: Arginine metabolic process, and Proline biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1020_Arginine_metabolic_process,_and_Proline_biosynthesis


id: CL:1039
description: L-serine biosynthetic process, and Dimeric alpha-beta barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1039_L-serine_biosynthetic_process,_and_Dimeric_alpha-beta_barrel


id: CL:1051
description: Ribonucleoside monophosphate biosynthetic process, and One-carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1051_Ribonucleoside_monophosphate_biosynthetic_process,_and_One-carbon_metabolism


id: CL:1056
description: Purine nucleobase biosynthetic process, and PurM-like, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1056_Purine_nucleobase_biosynthetic_process,_and_PurM-like,_C-terminal_domain


id: CL:1081
description: De novo UMP biosynthetic process, and Permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1081_De_novo_UMP_biosynthetic_process,_and_Permease_family


id: CL:1106
description: Sulfur amino acid metabolic process, and Amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1106_Sulfur_amino_acid_metabolic_process,_and_Amino_acid_transport


id: CL:1108
description: Cysteine metabolic process, and L-methionine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1108_Cysteine_metabolic_process,_and_L-methionine_biosynthetic_process


id: CL:1110
description: Cysteine synthase activity, and Selenocompound metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1110_Cysteine_synthase_activity,_and_Selenocompound_metabolism


id: CL:1144
description: Mixed, incl. Coenzyme A metabolic process, and tRNA threonylcarbamoyladenosine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1144_Mixed,_incl._Coenzyme_A_metabolic_process,_and_tRNA_threonylcarbamoyladenosine_modification


id: CL:1145
description: Mixed, incl. Coenzyme A metabolic process, and Protein lipoylation
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1145_Mixed,_incl._Coenzyme_A_metabolic_process,_and_Protein_lipoylation


id: CL:1147
description: Coenzyme A metabolic process, and N2,N2-dimethylguanosine tRNA methyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1147_Coenzyme_A_metabolic_process,_and_N2,N2-dimethylguanosine_tRNA_methyltransferase


id: CL:1167
description: Mixed, incl. Aminopeptidase, and Telomere recombination
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1167_Mixed,_incl._Aminopeptidase,_and_Telomere_recombination


id: CL:1176
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and DNA N-glycosylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1176_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_DNA_N-glycosylase_activity


id: CL:1178
description: tRNA threonylcarbamoyladenosine modification, and Protein acylation
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1178_tRNA_threonylcarbamoyladenosine_modification,_and_Protein_acylation


id: CL:1197
description: Mixed, incl. Ribonuclease activity, and rRNA methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1197_Mixed,_incl._Ribonuclease_activity,_and_rRNA_methyltransferase_activity


id: CL:1199
description: Mixed, incl. RNA degradation, and Ferric-uptake regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1199_Mixed,_incl._RNA_degradation,_and_Ferric-uptake_regulator


id: CL:120
description: Large ribosomal subunit, and tRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:120_Large_ribosomal_subunit,_and_tRNA-binding


id: CL:1201
description: Mixed, incl. Methyltransferase domain, and Nitrogen regulatory PII-like, alpha/beta
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1201_Mixed,_incl._Methyltransferase_domain,_and_Nitrogen_regulatory_PII-like,_alpha/beta


id: CL:1227
description: Mixed, incl. G5 domain, and Radical SAM superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1227_Mixed,_incl._G5_domain,_and_Radical_SAM_superfamily


id: CL:1236
description: Mixed, incl. Regulation of cell shape, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1236_Mixed,_incl._Regulation_of_cell_shape,_and_Cell_division


id: CL:1237
description: Mixed, incl. Regulation of cell shape, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1237_Mixed,_incl._Regulation_of_cell_shape,_and_Cell_division


id: CL:1238
description: Mixed, incl. Regulation of cell shape, and Integral component of plasma membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1238_Mixed,_incl._Regulation_of_cell_shape,_and_Integral_component_of_plasma_membrane


id: CL:1240
description: Mixed, incl. Regulation of cell shape, and Integral component of plasma membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1240_Mixed,_incl._Regulation_of_cell_shape,_and_Integral_component_of_plasma_membrane


id: CL:1241
description: Mixed, incl. Regulation of cell shape, and Integral component of plasma membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1241_Mixed,_incl._Regulation_of_cell_shape,_and_Integral_component_of_plasma_membrane


id: CL:1243
description: Cell division, and D-Alanine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1243_Cell_division,_and_D-Alanine_metabolism


id: CL:1245
description: Mixed, incl. Cell shape, and Penicillin-binding protein, dimerisation domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1245_Mixed,_incl._Cell_shape,_and_Penicillin-binding_protein,_dimerisation_domain_superfamily


id: CL:1247
description: Cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1247_Cell_shape,_and_Cell_division_site


id: CL:1252
description: MurE/MurF, N-terminal, and Glycosyl transferase family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1252_MurE/MurF,_N-terminal,_and_Glycosyl_transferase_family_4


id: CL:1287
description: Mixed, incl. Actin, and Penicillin-binding protein, dimerisation domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1287_Mixed,_incl._Actin,_and_Penicillin-binding_protein,_dimerisation_domain_superfamily


id: CL:1315
description: GlmS/FrlB, SIS domain 2, and Amino sugar metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1315_GlmS/FrlB,_SIS_domain_2,_and_Amino_sugar_metabolic_process


id: CL:1324
description: Carboxypeptidase activity, and DivIVA family
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1324_Carboxypeptidase_activity,_and_DivIVA_family


id: CL:1327
description: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1327_Peptidase_S11,_D-alanyl-D-alanine_carboxypeptidase_A


id: CL:133
description: Mixed, incl. Large ribosomal subunit, and KOW (Kyprides, Ouzounis, Woese) motif.
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:133_Mixed,_incl._Large_ribosomal_subunit,_and_KOW_(Kyprides,_Ouzounis,_Woese)_motif.


id: CL:1361
description: Mixed, incl. Crp-type HTH domain, and PDZ domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1361_Mixed,_incl._Crp-type_HTH_domain,_and_PDZ_domain


id: CL:1374
description: Mixed, incl. Peptidase M23, and B12 binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1374_Mixed,_incl._Peptidase_M23,_and_B12_binding_domain


id: CL:1383
description: Mixed, incl. Glycerophospholipid metabolism, and Chromosome segregation
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1383_Mixed,_incl._Glycerophospholipid_metabolism,_and_Chromosome_segregation


id: CL:1385
description: Mixed, incl. Chromosome segregation, and Pseudouridine synthase, RsuA/RluB/E/F
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1385_Mixed,_incl._Chromosome_segregation,_and_Pseudouridine_synthase,_RsuA/RluB/E/F


id: CL:1387
description: Chromosome segregation, and Peptidase family M50
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1387_Chromosome_segregation,_and_Peptidase_family_M50


id: CL:1413
description: Glycerophospholipid metabolism, and Potassium ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1413_Glycerophospholipid_metabolism,_and_Potassium_ion_binding


id: CL:1434
description: Mixed, incl. Glycerol metabolic process, and Polysaccharide biosynthesis C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1434_Mixed,_incl._Glycerol_metabolic_process,_and_Polysaccharide_biosynthesis_C-terminal_domain


id: CL:1435
description: Mixed, incl. Glycerol metabolic process, and Alkaline shock protein Asp23
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1435_Mixed,_incl._Glycerol_metabolic_process,_and_Alkaline_shock_protein_Asp23


id: CL:1437
description: Mixed, incl. MatE, and RNA capping
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1437_Mixed,_incl._MatE,_and_RNA_capping


id: CL:1466
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1466_Mixed,_incl._Negative_regulation_of_nucleobase-containing_compound_metabolic_process,_and_tRNA_(adenine)_methyltransferase_activity

description:
  Mixed, incl. Negative regulation of nucleobase-containing compound metabolic process, and tRNA (adenine) methyltransferase activity


id: CL:1469
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1469_Mixed,_incl._tRNA_(adenine)_methyltransferase_activity,_and_Nitrogen_regulatory_protein_PII/ATP_phosphoribosyltransferase,_C-terminal

description:
  Mixed, incl. tRNA (adenine) methyltransferase activity, and Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal


id: CL:1489
description: Mixed, incl. Porphyrin-containing compound metabolic process, and Queuosine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1489_Mixed,_incl._Porphyrin-containing_compound_metabolic_process,_and_Queuosine_biosynthesis


id: CL:1491
description: Mixed, incl. Metallo-beta-lactamase, and Carbon-sulfur lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1491_Mixed,_incl._Metallo-beta-lactamase,_and_Carbon-sulfur_lyase_activity


id: CL:1507
description: Queuosine biosynthesis, and Anaerobic sulphatase maturase, radical SAM
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1507_Queuosine_biosynthesis,_and_Anaerobic_sulphatase_maturase,_radical_SAM


id: CL:1518
description: Cation transport, and ATP-binding cassette (ABC) transporter complex
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1518_Cation_transport,_and_ATP-binding_cassette_(ABC)_transporter_complex


id: CL:1520
description: Metal ion transport, and Ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1520_Metal_ion_transport,_and_Ion_transport


id: CL:1521
description: Mixed, incl. Heavy-metal-associated domain, and Metal ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1521_Mixed,_incl._Heavy-metal-associated_domain,_and_Metal_ion_transport


id: CL:1524
description: Mixed, incl. Ferric-uptake regulator, and Transcriptional repressor, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1524_Mixed,_incl._Ferric-uptake_regulator,_and_Transcriptional_repressor,_C-terminal


id: CL:1548
description: Metal ion transmembrane transporter activity, and Inorganic anion transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1548_Metal_ion_transmembrane_transporter_activity,_and_Inorganic_anion_transmembrane_transport


id: CL:1567
description: Mixed, incl. Esterase-like, and RuvB-like P-loop domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1567_Mixed,_incl._Esterase-like,_and_RuvB-like_P-loop_domain


id: CL:1590
description: Mixed, incl. UMP salvage, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1590_Mixed,_incl._UMP_salvage,_and_ABC_transporter,_permease


id: CL:1593
description: ABC transporter, permease, and Uracil metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1593_ABC_transporter,_permease,_and_Uracil_metabolic_process


id: CL:1628
description: Mixed, incl. Nitrogen metabolism, and Glutamate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1628_Mixed,_incl._Nitrogen_metabolism,_and_Glutamate_biosynthetic_process


id: CL:1630
description: Nitrogen metabolism, and Glutamate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1630_Nitrogen_metabolism,_and_Glutamate_biosynthetic_process


id: CL:1633
description: Ammonia ligase activity, and Response to hydrogen peroxide
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1633_Ammonia_ligase_activity,_and_Response_to_hydrogen_peroxide


id: CL:1642
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1642_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_and_Tricarboxylic_acid_metabolic_process

description:
  Oxidoreductase activity, acting on iron-sulfur proteins as donors, and Tricarboxylic acid metabolic process


id: CL:1654
description: Glutamate biosynthetic process, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1654_Glutamate_biosynthetic_process,_and_4Fe-4S_binding_domain


id: CL:1672
description: Mixed, incl. Flavodoxin/nitric oxide synthase, and Folylpolyglutamate synthetase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1672_Mixed,_incl._Flavodoxin/nitric_oxide_synthase,_and_Folylpolyglutamate_synthetase,_conserved_site


id: CL:1683
description: Mixed, incl. Polysaccharide biosynthetic process, and Nucleotide-diphospho-sugar transferases
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1683_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Nucleotide-diphospho-sugar_transferases


id: CL:1685
description: Mixed, incl. Polysaccharide biosynthetic process, and Nucleotide-diphospho-sugar transferases
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1685_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Nucleotide-diphospho-sugar_transferases


id: CL:1688
description: Mixed, incl. Polysaccharide biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1688_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:1689
description: Polysaccharide biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1689_Polysaccharide_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:1690
description: Polysaccharide biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1690_Polysaccharide_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:1691
description: Polysaccharide biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1691_Polysaccharide_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:1692
description: Polysaccharide biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1692_Polysaccharide_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:1693
description: O-Antigen nucleotide sugar biosynthesis, and Nucleotide-diphospho-sugar transferases
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1693_O-Antigen_nucleotide_sugar_biosynthesis,_and_Nucleotide-diphospho-sugar_transferases


id: CL:1694
description: Polyketide sugar unit biosynthesis, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1694_Polyketide_sugar_unit_biosynthesis,_and_Polysaccharide_biosynthetic_process


id: CL:1696
description: Polyketide sugar unit biosynthesis, and Glycosyltransferase like family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1696_Polyketide_sugar_unit_biosynthesis,_and_Glycosyltransferase_like_family_2


id: CL:1697
description: Polyketide sugar unit biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1697_Polyketide_sugar_unit_biosynthesis


id: CL:1706
description: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase, and O-Antigen ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1706_Exopolysaccharide_biosynthesis_polyprenyl_glycosylphosphotransferase,_and_O-Antigen_ligase


id: CL:1727
description: Nucleotidyl transferase domain, and NAD dependent epimerase/dehydratase family
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1727_Nucleotidyl_transferase_domain,_and_NAD_dependent_epimerase/dehydratase_family


id: CL:1736
description: Mixed, incl. Glucan biosynthetic process, and Polysaccharide biosynthesis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1736_Mixed,_incl._Glucan_biosynthetic_process,_and_Polysaccharide_biosynthesis_protein


id: CL:1750
description: Glycosyl transferases group 1, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1750_Glycosyl_transferases_group_1,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:1752
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1752_Mixed,_incl._UDP-N-acetylglucosamine_2-epimerase_domain,_and_Homoserine_dehydrogenase,_NAD_binding_domain

description:
  Mixed, incl. UDP-N-acetylglucosamine 2-epimerase domain, and Homoserine dehydrogenase, NAD binding domain


id: CL:1776
description: UDP-glucuronic acid decarboxylase, and Cytidylyltransferase IspD/TarI
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1776_UDP-glucuronic_acid_decarboxylase,_and_Cytidylyltransferase_IspD/TarI


id: CL:1791
description: Glycosyl transferase family 2, and Bacterial membrane protein YfhO
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1791_Glycosyl_transferase_family_2,_and_Bacterial_membrane_protein_YfhO


id: CL:1802
description: Mixed, incl. Adaptive Immune System, and PdaC/RsiV-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1802_Mixed,_incl._Adaptive_Immune_System,_and_PdaC/RsiV-like_superfamily


id: CL:1821
description: Mixed, incl. Exonuclease activity, and Cytolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1821_Mixed,_incl._Exonuclease_activity,_and_Cytolysis


id: CL:1823
description: Mixed, incl. PD-(D/E)XK nuclease superfamily, and Cytolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1823_Mixed,_incl._PD-(D/E)XK_nuclease_superfamily,_and_Cytolysis


id: CL:1854
description: Glycoside hydrolase, family 25, and NodB homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1854_Glycoside_hydrolase,_family_25,_and_NodB_homology_domain


id: CL:1868
description: Mixed, incl. Cell differentiation, and Membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1868_Mixed,_incl._Cell_differentiation,_and_Membrane


id: CL:1869
description: Mixed, incl. Cell differentiation, and Membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1869_Mixed,_incl._Cell_differentiation,_and_Membrane


id: CL:187
description: Zinc-binding ribosomal protein, and L28p-like
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:187_Zinc-binding_ribosomal_protein,_and_L28p-like


id: CL:1870
description: Mixed, incl. Cell differentiation, and Membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1870_Mixed,_incl._Cell_differentiation,_and_Membrane


id: CL:1871
description: Mixed, incl. Cell differentiation, and Carbohydrate derivative catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1871_Mixed,_incl._Cell_differentiation,_and_Carbohydrate_derivative_catabolic_process


id: CL:1872
description: Mixed, incl. Cell differentiation, and Zn_pept
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1872_Mixed,_incl._Cell_differentiation,_and_Zn_pept


id: CL:1873
description: Cell differentiation, and Zn_pept
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1873_Cell_differentiation,_and_Zn_pept


id: CL:1874
description: Cell differentiation, and Zn_pept
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1874_Cell_differentiation,_and_Zn_pept


id: CL:1875
description: Cell differentiation, and Sigma-70 region 3
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1875_Cell_differentiation,_and_Sigma-70_region_3


id: CL:1876
description: Sporulation, and Peptidase HybD-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1876_Sporulation,_and_Peptidase_HybD-like_domain_superfamily


id: CL:1877
description: Sporulation, and Peptidase HybD-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1877_Sporulation,_and_Peptidase_HybD-like_domain_superfamily


id: CL:1880
description: Sporulation, and Sigma-70 region 3
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1880_Sporulation,_and_Sigma-70_region_3


id: CL:1881
description: Sporulation, and Sigma-70 region 3
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1881_Sporulation,_and_Sigma-70_region_3


id: CL:1882
description: Mixed, incl. Sporulation, and SpoVA
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1882_Mixed,_incl._Sporulation,_and_SpoVA


id: CL:1908
description: Mixed, incl. Aspartyl protease, and GAF-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1908_Mixed,_incl._Aspartyl_protease,_and_GAF-like_domain_superfamily


id: CL:1926
description: Stage III sporulation protein AC/AD family, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1926_Stage_III_sporulation_protein_AC/AD_family,_and_Sporulation


id: CL:1946
description: Mixed, incl. Flavoprotein, and Glutamine amidotransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1946_Mixed,_incl._Flavoprotein,_and_Glutamine_amidotransferase_domain


id: CL:1966
description: Mixed, incl. Spore germination, and Zn_pept
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1966_Mixed,_incl._Spore_germination,_and_Zn_pept


id: CL:1969
description: Mixed, incl. Cell Wall Hydrolase, and Zn_pept
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1969_Mixed,_incl._Cell_Wall_Hydrolase,_and_Zn_pept


id: CL:1984
description: Spore germination, and Transmembrane
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1984_Spore_germination,_and_Transmembrane


id: CL:1996
description: Mixed, incl. Endospore-forming forespore, and UTP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:1996_Mixed,_incl._Endospore-forming_forespore,_and_UTP_metabolic_process


id: CL:2013
description: Mixed, incl. CDP-alcohol phosphatidyltransferase, and Methylthiotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2013_Mixed,_incl._CDP-alcohol_phosphatidyltransferase,_and_Methylthiotransferase


id: CL:2016
description: Mixed, incl. Ribosome biogenesis, and YabP family
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2016_Mixed,_incl._Ribosome_biogenesis,_and_YabP_family


id: CL:2043
description: Mixed, incl. Ami_3, and Spore wall
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2043_Mixed,_incl._Ami_3,_and_Spore_wall


id: CL:2054
description: Mixed, incl. Membrane, and Horizontal gene transfer
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2054_Mixed,_incl._Membrane,_and_Horizontal_gene_transfer


id: CL:2055
description: Mixed, incl. Horizontal gene transfer, and Transmembrane
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2055_Mixed,_incl._Horizontal_gene_transfer,_and_Transmembrane


id: CL:2057
description: Mostly uncharacterized, incl. Horizontal gene transfer, and Sulfite exporter TauE/SafE
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2057_Mostly_uncharacterized,_incl._Horizontal_gene_transfer,_and_Sulfite_exporter_TauE/SafE


id: CL:2058
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2058_Mostly_uncharacterized,_incl._Sulfite_exporter_TauE/SafE,_and_Establishment_of_competence_for_transformation

description:
  Mostly uncharacterized, incl. Sulfite exporter TauE/SafE, and Establishment of competence for transformation


id: CL:2060
description: Mostly uncharacterized, incl. Core-binding (CB) domain, and Stage II sporulation protein M
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2060_Mostly_uncharacterized,_incl._Core-binding_(CB)_domain,_and_Stage_II_sporulation_protein_M


id: CL:2062
description: Mostly uncharacterized, incl. Bacterial membrane protein YfhO, and Calcineurin-like phosphoesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2062_Mostly_uncharacterized,_incl._Bacterial_membrane_protein_YfhO,_and_Calcineurin-like_phosphoesterase


id: CL:2064
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2064_Mixed,_incl._Bacterial_membrane_protein_YfhO,_and_Peptidyl-prolyl_cis-trans_isomerase_domain_superfamily

description:
  Mixed, incl. Bacterial membrane protein YfhO, and Peptidyl-prolyl cis-trans isomerase domain superfamily


id: CL:2088
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2088_Mixed,_incl._Positive_regulation_of_RNA_biosynthetic_process,_and_Helix-turn-helix_XRE-family_like_proteins

description:
  Mixed, incl. Positive regulation of RNA biosynthetic process, and Helix-turn-helix XRE-family like proteins


id: CL:2126
description: Mixed, incl. Horizontal gene transfer, and Antibiotic resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2126_Mixed,_incl._Horizontal_gene_transfer,_and_Antibiotic_resistance


id: CL:2129
description: Mixed, incl. Peptidase M14, carboxypeptidase A, and Secondary metabolite biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2129_Mixed,_incl._Peptidase_M14,_carboxypeptidase_A,_and_Secondary_metabolite_biosynthetic_process


id: CL:2161
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2161_Mostly_uncharacterized,_incl._Import_into_cell,_and_Transcription-coupled_nucleotide-excision_repair

description:
  Mostly uncharacterized, incl. Import into cell, and Transcription-coupled nucleotide-excision repair


id: CL:2163
description: Mixed, incl. Import into cell, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2163_Mixed,_incl._Import_into_cell,_and_ABC-2_family_transporter_protein


id: CL:2202
description: Mixed, incl. Protein of unknown function DUF421, and Putative carbohydrate binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2202_Mixed,_incl._Protein_of_unknown_function_DUF421,_and_Putative_carbohydrate_binding_domain


id: CL:2218
description: Mostly uncharacterized, incl. Cyclase activity, and CoA enzyme activase
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2218_Mostly_uncharacterized,_incl._Cyclase_activity,_and_CoA_enzyme_activase


id: CL:2219
description: Mixed, incl. Cyclase activity, and CoA enzyme activase
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2219_Mixed,_incl._Cyclase_activity,_and_CoA_enzyme_activase


id: CL:2221
description: Mixed, incl. Cyclase activity, and FAD dependent protein
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2221_Mixed,_incl._Cyclase_activity,_and_FAD_dependent_protein


id: CL:2231
description: CoA enzyme activase, and FldB/FldC dehydratase alpha/beta subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2231_CoA_enzyme_activase,_and_FldB/FldC_dehydratase_alpha/beta_subunit


id: CL:2240
description: Mixed, incl. ComA-like, MBL domain, and Protein of unknown function DUF3006
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2240_Mixed,_incl._ComA-like,_MBL_domain,_and_Protein_of_unknown_function_DUF3006


id: CL:2241
description: Mixed, incl. ComA-like, MBL domain, and Protein of unknown function DUF3006
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2241_Mixed,_incl._ComA-like,_MBL_domain,_and_Protein_of_unknown_function_DUF3006


id: CL:2250
description: Mixed, incl. ComA-like, MBL domain, and Protein of unknown function DUF3006
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2250_Mixed,_incl._ComA-like,_MBL_domain,_and_Protein_of_unknown_function_DUF3006


id: CL:2259
description: Mixed, incl. Iron-sulfur cluster assembly, and Haloacid dehalogenase-like hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2259_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Haloacid_dehalogenase-like_hydrolase


id: CL:2260
description: Mixed, incl. Haloacid dehalogenase-like hydrolase, and Peptidase M42
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2260_Mixed,_incl._Haloacid_dehalogenase-like_hydrolase,_and_Peptidase_M42


id: CL:2261
description: Mixed, incl. Peptidase M42, and Domain of unknown function DUF4190
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2261_Mixed,_incl._Peptidase_M42,_and_Domain_of_unknown_function_DUF4190


id: CL:2263
description: Peptidase M42, and Sortase family
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2263_Peptidase_M42,_and_Sortase_family


id: CL:2280
description: Haloacid dehalogenase-like hydrolase, and LytR_cpsA_psr family
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2280_Haloacid_dehalogenase-like_hydrolase,_and_LytR_cpsA_psr_family


id: CL:2292
description: Sulfur relay system, and Transcription regulator Rrf2-type, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2292_Sulfur_relay_system,_and_Transcription_regulator_Rrf2-type,_conserved_site


id: CL:2295
description: [2Fe-2S] cluster assembly, and THUMP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2295_[2Fe-2S]_cluster_assembly,_and_THUMP_domain


id: CL:2317
description: Mixed, incl. Flagellar assembly, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2317_Mixed,_incl._Flagellar_assembly,_and_Bacterial_chemotaxis


id: CL:2318
description: Mixed, incl. Flagellar assembly, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2318_Mixed,_incl._Flagellar_assembly,_and_Bacterial_chemotaxis


id: CL:2319
description: Flagellar assembly, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2319_Flagellar_assembly,_and_Bacterial_chemotaxis


id: CL:2321
description: Flagellar assembly, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2321_Flagellar_assembly,_and_Bacterial_chemotaxis


id: CL:2330
description: Bacterial-type flagellum-dependent cell motility
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2330_Bacterial-type_flagellum-dependent_cell_motility


id: CL:2352
description: Bacterial flagellum protein export, and Bacterial-type flagellum assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2352_Bacterial_flagellum_protein_export,_and_Bacterial-type_flagellum_assembly


id: CL:2367
description: Bacterial-type flagellum hook, and CheC-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2367_Bacterial-type_flagellum_hook,_and_CheC-like_protein


id: CL:2427
description: HD-GYP domain, and Diguanylate cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2427_HD-GYP_domain,_and_Diguanylate_cyclase_activity


id: CL:2446
description: Mixed, incl. Horizontal gene transfer, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2446_Mixed,_incl._Horizontal_gene_transfer,_and_Pilus_organization


id: CL:2448
description: Horizontal gene transfer, and Type II/IV secretion system protein
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2448_Horizontal_gene_transfer,_and_Type_II/IV_secretion_system_protein


id: CL:2450
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2450_Protein_transport_across_the_cell_outer_membrane,_and_Type_II_secretion_system_GspF_domain_superfamily

description:
  Protein transport across the cell outer membrane, and Type II secretion system GspF domain superfamily


id: CL:2468
description: Mixed, incl. Pilus assembly, and Translation elongation factor EF1B/ribosomal protein S6
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2468_Mixed,_incl._Pilus_assembly,_and_Translation_elongation_factor_EF1B/ribosomal_protein_S6


id: CL:248
description: Mixed, incl. K Homology domain, and Ribosomal small subunit biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:248_Mixed,_incl._K_Homology_domain,_and_Ribosomal_small_subunit_biogenesis


id: CL:2482
description: Mixed, incl. TadE-like, and Type II secretion system (T2SS), protein F
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2482_Mixed,_incl._TadE-like,_and_Type_II_secretion_system_(T2SS),_protein_F


id: CL:2487
description: Type II secretion system (T2SS), protein F, and SAF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2487_Type_II_secretion_system_(T2SS),_protein_F,_and_SAF_domain


id: CL:250
description: Mixed, incl. Initiation factor, and Transcription termination
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:250_Mixed,_incl._Initiation_factor,_and_Transcription_termination


id: CL:2509
description: Mixed, incl. Electron transport chain, and Oxidative phosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2509_Mixed,_incl._Electron_transport_chain,_and_Oxidative_phosphorylation


id: CL:2510
description: Mixed, incl. Proton transmembrane transport, and Oxidoreductase activity, acting on NAD(P)H
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2510_Mixed,_incl._Proton_transmembrane_transport,_and_Oxidoreductase_activity,_acting_on_NAD(P)H


id: CL:2511
description: Mixed, incl. Oxidoreductase activity, acting on NAD(P)H, and Protein maturation
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2511_Mixed,_incl._Oxidoreductase_activity,_acting_on_NAD(P)H,_and_Protein_maturation


id: CL:2512
description: Mixed, incl. Thioredoxin-like superfamily, and DRTGG domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2512_Mixed,_incl._Thioredoxin-like_superfamily,_and_DRTGG_domain


id: CL:2514
description: Mixed, incl. DRTGG domain, and Thioredoxin-like [2Fe-2S] ferredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2514_Mixed,_incl._DRTGG_domain,_and_Thioredoxin-like_[2Fe-2S]_ferredoxin


id: CL:2516
description: DRTGG domain, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2516_DRTGG_domain,_and_4Fe-4S_dicluster_domain


id: CL:2536
description: Mixed, incl. Polyamine transport, and EamA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2536_Mixed,_incl._Polyamine_transport,_and_EamA_domain


id: CL:2537
description: EamA domain, and MFS/sugar transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2537_EamA_domain,_and_MFS/sugar_transport_protein


id: CL:2546
description: Polyamine transport, and ABC-type polyamine transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2546_Polyamine_transport,_and_ABC-type_polyamine_transporter_activity


id: CL:2556
description: Mixed, incl. Oxidoreductase activity, acting on NAD(P)H, and ATPase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2556_Mixed,_incl._Oxidoreductase_activity,_acting_on_NAD(P)H,_and_ATPase_complex


id: CL:2557
description: ATPase complex, and Nickel cation binding
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2557_ATPase_complex,_and_Nickel_cation_binding


id: CL:2568
description: Oxidoreductase activity, acting on NAD(P)H
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2568_Oxidoreductase_activity,_acting_on_NAD(P)H


id: CL:2605
description: CoA-ligase activity, and Indolepyruvate oxidoreductase subunit IorA
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2605_CoA-ligase_activity,_and_Indolepyruvate_oxidoreductase_subunit_IorA


id: CL:2618
description: Mixed, incl. ABC transporter-like, ATP-binding domain, and Phosphorelay signal transduction system
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2618_Mixed,_incl._ABC_transporter-like,_ATP-binding_domain,_and_Phosphorelay_signal_transduction_system


id: CL:2619
description: Mixed, incl. ABC transporter-like, ATP-binding domain, and Two-component regulatory system
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2619_Mixed,_incl._ABC_transporter-like,_ATP-binding_domain,_and_Two-component_regulatory_system


id: CL:2620
description: Mixed, incl. ABC transporter-like, conserved site, and ABC3 transporter permease protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2620_Mixed,_incl._ABC_transporter-like,_conserved_site,_and_ABC3_transporter_permease_protein_domain


id: CL:2621
description: Mixed, incl. ABC transporter-like, conserved site, and ABC3 transporter permease protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2621_Mixed,_incl._ABC_transporter-like,_conserved_site,_and_ABC3_transporter_permease_protein_domain


id: CL:2622
description: Mixed, incl. ABC3 transporter permease protein domain, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2622_Mixed,_incl._ABC3_transporter_permease_protein_domain,_and_MacB,_ATP-binding_domain


id: CL:2623
description: Mixed, incl. ABC3 transporter permease protein domain, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2623_Mixed,_incl._ABC3_transporter_permease_protein_domain,_and_MacB,_ATP-binding_domain


id: CL:2624
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2624_Mixed,_incl._ABC3_transporter_permease_protein_domain,_and_ABC_transporter,_lipoprotein_release,_LolD-like

description:
  Mixed, incl. ABC3 transporter permease protein domain, and ABC transporter, lipoprotein release, LolD-like


id: CL:2626
description: MacB-like periplasmic core domain, and ABC transporter, lipoprotein release, LolD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2626_MacB-like_periplasmic_core_domain,_and_ABC_transporter,_lipoprotein_release,_LolD-like


id: CL:2647
description: Mixed, incl. Aldo/keto reductase family, and NADPH-dependent FMN reductase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2647_Mixed,_incl._Aldo/keto_reductase_family,_and_NADPH-dependent_FMN_reductase-like


id: CL:2658
description: Mixed, incl. Cys-rich peptide, Clo7bot family, and Acetyltransferase (GNAT) family
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2658_Mixed,_incl._Cys-rich_peptide,_Clo7bot_family,_and_Acetyltransferase_(GNAT)_family


id: CL:2669
description: Type 1 protein exporter, and MarR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2669_Type_1_protein_exporter,_and_MarR-type_HTH_domain


id: CL:2670
description: Type 1 protein exporter, and Biotin-lipoyl like
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2670_Type_1_protein_exporter,_and_Biotin-lipoyl_like


id: CL:2683
description: Mtb iron assimilation by chelation, and Membrane transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2683_Mtb_iron_assimilation_by_chelation,_and_Membrane_transport_protein


id: CL:2692
description: Mixed, incl. MacB, ATP-binding domain, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2692_Mixed,_incl._MacB,_ATP-binding_domain,_and_Signal


id: CL:2701
description: Mixed, incl. Two-component regulatory system, and Peptidyl-histidine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2701_Mixed,_incl._Two-component_regulatory_system,_and_Peptidyl-histidine_modification


id: CL:2702
description: Mixed, incl. Two-component regulatory system, and His Kinase A (phosphoacceptor) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2702_Mixed,_incl._Two-component_regulatory_system,_and_His_Kinase_A_(phosphoacceptor)_domain


id: CL:2703
description: Mixed, incl. Two-component regulatory system, and Putative ABC-transporter type IV
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2703_Mixed,_incl._Two-component_regulatory_system,_and_Putative_ABC-transporter_type_IV


id: CL:2705
description: Mixed, incl. Transcription regulator Rrf2, and HDIG domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2705_Mixed,_incl._Transcription_regulator_Rrf2,_and_HDIG_domain


id: CL:2717
description: Two-component regulatory system, and MacB-like periplasmic core domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2717_Two-component_regulatory_system,_and_MacB-like_periplasmic_core_domain


id: CL:2726
description: Two-component regulatory system, and His Kinase A (phosphoacceptor) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2726_Two-component_regulatory_system,_and_His_Kinase_A_(phosphoacceptor)_domain


id: CL:2728
description: His Kinase A (phosphoacceptor) domain, and OmpR/PhoB-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2728_His_Kinase_A_(phosphoacceptor)_domain,_and_OmpR/PhoB-type_DNA-binding_domain


id: CL:2745
description: Quorum sensing, and Domain of unknown function DUF362
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2745_Quorum_sensing,_and_Domain_of_unknown_function_DUF362


id: CL:2747
description: ABC-2 family transporter protein, and Two-component regulatory system
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2747_ABC-2_family_transporter_protein,_and_Two-component_regulatory_system


id: CL:2764
description: Mixed, incl. ABC transporter-like, ATP-binding domain, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2764_Mixed,_incl._ABC_transporter-like,_ATP-binding_domain,_and_ABC-2_family_transporter_protein


id: CL:2765
description: Mixed, incl. ABC-2 family transporter protein, and ABC transporter-like, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2765_Mixed,_incl._ABC-2_family_transporter_protein,_and_ABC_transporter-like,_ATP-binding_domain


id: CL:2766
description: Mixed, incl. ABC-2 family transporter protein, and ABC transporter-like, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2766_Mixed,_incl._ABC-2_family_transporter_protein,_and_ABC_transporter-like,_ATP-binding_domain


id: CL:2768
description: Mixed, incl. ABC-2 family transporter protein, and Transcription regulator HTH, GntR
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2768_Mixed,_incl._ABC-2_family_transporter_protein,_and_Transcription_regulator_HTH,_GntR


id: CL:2769
description: Mixed, incl. ABC-2 family transporter protein, and Transcription regulator HTH, GntR
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2769_Mixed,_incl._ABC-2_family_transporter_protein,_and_Transcription_regulator_HTH,_GntR


id: CL:2772
description: Mixed, incl. ABC-2 family transporter protein, and Transcription regulator HTH, GntR
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2772_Mixed,_incl._ABC-2_family_transporter_protein,_and_Transcription_regulator_HTH,_GntR


id: CL:2792
description: Mixed, incl. ABC-2 family transporter protein, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2792_Mixed,_incl._ABC-2_family_transporter_protein,_and_4Fe-4S_binding_domain


id: CL:2816
description: Mixed, incl. Methyltransferase, class B, and MoaA/NifB/PqqE, iron-sulphur binding, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2816_Mixed,_incl._Methyltransferase,_class_B,_and_MoaA/NifB/PqqE,_iron-sulphur_binding,_conserved_site


id: CL:2828
description: Mixed, incl. Flavodoxin-like fold, and Stage II sporulation protein M
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2828_Mixed,_incl._Flavodoxin-like_fold,_and_Stage_II_sporulation_protein_M


id: CL:2839
description: Mixed, incl. Establishment of localization, and Band 7 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2839_Mixed,_incl._Establishment_of_localization,_and_Band_7_domain


id: CL:2840
description: Mixed, incl. Nitrogen compound transport, and Envelope
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2840_Mixed,_incl._Nitrogen_compound_transport,_and_Envelope


id: CL:2841
description: Mixed, incl. ABC transporter, CbiO/EcfA subunit, and Vitamin transport
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2841_Mixed,_incl._ABC_transporter,_CbiO/EcfA_subunit,_and_Vitamin_transport


id: CL:2842
description: Mixed, incl. ABC transporter, CbiO/EcfA subunit, and Vitamin transport
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2842_Mixed,_incl._ABC_transporter,_CbiO/EcfA_subunit,_and_Vitamin_transport


id: CL:2844
description: Mixed, incl. ABC transporter, CbiO/EcfA subunit, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2844_Mixed,_incl._ABC_transporter,_CbiO/EcfA_subunit,_and_Cobalt_transport_protein


id: CL:2846
description: ABC transporter, CbiO/EcfA subunit, and Amide transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2846_ABC_transporter,_CbiO/EcfA_subunit,_and_Amide_transmembrane_transporter_activity


id: CL:2871
description: Mixed, incl. Membrane assembly, and Domain of unknown function DUF4430
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2871_Mixed,_incl._Membrane_assembly,_and_Domain_of_unknown_function_DUF4430


id: CL:2881
description: Mixed, incl. Nickel, and Cof family
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2881_Mixed,_incl._Nickel,_and_Cof_family


id: CL:2890
description: Mixed, incl. beta-Lactam resistance, and Ligand-gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2890_Mixed,_incl._beta-Lactam_resistance,_and_Ligand-gated_channel_activity


id: CL:2908
description: Ligand-gated channel activity, and Amino acid ABC transporter, permease protein, 3-TM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2908_Ligand-gated_channel_activity,_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain


id: CL:2917
description: Mostly uncharacterized, incl. Band 7 domain, and Cytolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2917_Mostly_uncharacterized,_incl._Band_7_domain,_and_Cytolysis


id: CL:2918
description: Mostly uncharacterized, incl. Cytolysis, and IrrE N-terminal-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2918_Mostly_uncharacterized,_incl._Cytolysis,_and_IrrE_N-terminal-like_domain


id: CL:292
description: Aminoacyl-tRNA synthetase, class Ia, and Anticodon-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:292_Aminoacyl-tRNA_synthetase,_class_Ia,_and_Anticodon-binding


id: CL:2920
description: RNA polymerase sigma factor, region 3/4-like, and Transmembrane
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2920_RNA_polymerase_sigma_factor,_region_3/4-like,_and_Transmembrane


id: CL:2932
description: Mixed, incl. Cytolysis, and Lipid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2932_Mixed,_incl._Cytolysis,_and_Lipid_catabolic_process


id: CL:2942
description: Mixed, incl. Band 7 domain, and PdaC/RsiV-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2942_Mixed,_incl._Band_7_domain,_and_PdaC/RsiV-like_superfamily


id: CL:2954
description: Mixed, incl. S-adenosyl-L-methionine, and Lambda repressor-like, DNA-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2954_Mixed,_incl._S-adenosyl-L-methionine,_and_Lambda_repressor-like,_DNA-binding_domain_superfamily


id: CL:2955
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2955_Mixed,_incl._RNA_methyltransferase_activity,_and_Lambda_repressor-like,_DNA-binding_domain_superfamily

description:
  Mixed, incl. RNA methyltransferase activity, and Lambda repressor-like, DNA-binding domain superfamily


id: CL:2957
description: Mixed, incl. Thioesterase domain, and Conserved hypothetical protein 95
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2957_Mixed,_incl._Thioesterase_domain,_and_Conserved_hypothetical_protein_95


id: CL:2958
description: Mixed, incl. Thioesterase domain, and Conserved hypothetical protein 95
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2958_Mixed,_incl._Thioesterase_domain,_and_Conserved_hypothetical_protein_95


id: CL:2967
description: Mixed, incl. Acetyltransferase (GNAT) family, and Positive regulation of biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2967_Mixed,_incl._Acetyltransferase_(GNAT)_family,_and_Positive_regulation_of_biosynthetic_process


id: CL:2981
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2981_Mixed,_incl._Lipoprotein_metabolic_process,_and_Lambda_repressor-like,_DNA-binding_domain_superfamily

description:
  Mixed, incl. Lipoprotein metabolic process, and Lambda repressor-like, DNA-binding domain superfamily


id: CL:2992
description: Mixed, incl. PUA domain superfamily, and Radical SAM superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:2992_Mixed,_incl._PUA_domain_superfamily,_and_Radical_SAM_superfamily


id: CL:3003
description: Mixed, incl. FAD dependent protein, and Dimeric alpha-beta barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3003_Mixed,_incl._FAD_dependent_protein,_and_Dimeric_alpha-beta_barrel


id: CL:3016
description: Mixed, incl. Transmembrane, and Non-homologous end-joining
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3016_Mixed,_incl._Transmembrane,_and_Non-homologous_end-joining


id: CL:3017
description: Mostly uncharacterized, incl. Non-homologous end-joining, and DNA-binding HTH domain, TetR-type
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3017_Mostly_uncharacterized,_incl._Non-homologous_end-joining,_and_DNA-binding_HTH_domain,_TetR-type


id: CL:3018
description: Mostly uncharacterized, incl. Pigment metabolic process, and Suppression of phagosomal maturation
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3018_Mostly_uncharacterized,_incl._Pigment_metabolic_process,_and_Suppression_of_phagosomal_maturation


id: CL:3019
description: Mixed, incl. RmlC-like jelly roll fold, and Sporulation protein YtfJ
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3019_Mixed,_incl._RmlC-like_jelly_roll_fold,_and_Sporulation_protein_YtfJ


id: CL:3020
description: Mixed, incl. Sporulation protein YtfJ, and Histidine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3020_Mixed,_incl._Sporulation_protein_YtfJ,_and_Histidine_catabolic_process


id: CL:3033
description: Mixed, incl. NADPH-dependent FMN reductase-like, and Flavin containing amine oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3033_Mixed,_incl._NADPH-dependent_FMN_reductase-like,_and_Flavin_containing_amine_oxidoreductase


id: CL:3044
description: Mixed, incl. Acyltransferase family, and Transmembrane secretion effector
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3044_Mixed,_incl._Acyltransferase_family,_and_Transmembrane_secretion_effector


id: CL:3059
description: Mixed, incl. Non-homologous end-joining, and DNA-binding HTH domain, TetR-type
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3059_Mixed,_incl._Non-homologous_end-joining,_and_DNA-binding_HTH_domain,_TetR-type


id: CL:3061
description: Mixed, incl. PP-loop family, and Arsenite transport
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3061_Mixed,_incl._PP-loop_family,_and_Arsenite_transport


id: CL:3078
description: Non-homologous end-joining, and Protein of unknown function DUF421
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3078_Non-homologous_end-joining,_and_Protein_of_unknown_function_DUF421


id: CL:3092
description: Mixed, incl. SdpI/YfhL protein family, and Cna protein B-type domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3092_Mixed,_incl._SdpI/YfhL_protein_family,_and_Cna_protein_B-type_domain


id: CL:3093
description: Mixed, incl. Cna protein B-type domain, and Sortase family
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3093_Mixed,_incl._Cna_protein_B-type_domain,_and_Sortase_family


id: CL:3095
description: Cna protein B-type domain, and Sortase family
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3095_Cna_protein_B-type_domain,_and_Sortase_family


id: CL:3116
description: Mixed, incl. SdpI/YfhL protein family, and Xenobiotic transport
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3116_Mixed,_incl._SdpI/YfhL_protein_family,_and_Xenobiotic_transport


id: CL:3127
description: Mixed, incl. Phosphoglycerate mutase family, and ATP cone domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3127_Mixed,_incl._Phosphoglycerate_mutase_family,_and_ATP_cone_domain


id: CL:3141
description: Response to virus, and Thiamine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3141_Response_to_virus,_and_Thiamine_metabolism


id: CL:3142
description: Response to virus, and Lysine degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3142_Response_to_virus,_and_Lysine_degradation


id: CL:3161
description: Maintenance of DNA repeat elements, and DEAD/DEAH box helicase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3161_Maintenance_of_DNA_repeat_elements,_and_DEAD/DEAH_box_helicase_domain


id: CL:3173
description: Thiamine biosynthetic process, and Biotin and thiamin synthesis-associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3173_Thiamine_biosynthetic_process,_and_Biotin_and_thiamin_synthesis-associated_domain


id: CL:3191
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3191_Biotin_and_thiamin_synthesis-associated_domain,_and_Acetolactate_synthase/Transcription_factor_NikR,_C-terminal

description:
  Biotin and thiamin synthesis-associated domain, and Acetolactate synthase/Transcription factor NikR, C-terminal


id: CL:3207
description: Mixed, incl. ABC transporters, and Carbohydrate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3207_Mixed,_incl._ABC_transporters,_and_Carbohydrate_metabolic_process


id: CL:3208
description: MetI-like superfamily, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3208_MetI-like_superfamily,_and_Bacterial_extracellular_solute-binding_protein


id: CL:3209
description: MetI-like superfamily, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3209_MetI-like_superfamily,_and_Bacterial_extracellular_solute-binding_protein


id: CL:3210
description: MetI-like superfamily, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3210_MetI-like_superfamily,_and_Bacterial_extracellular_solute-binding_protein


id: CL:3211
description: MetI-like superfamily, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3211_MetI-like_superfamily,_and_Bacterial_extracellular_solute-binding_protein


id: CL:3213
description: MetI-like superfamily, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3213_MetI-like_superfamily,_and_Bacterial_extracellular_solute-binding_protein


id: CL:3215
description: MetI-like superfamily, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3215_MetI-like_superfamily,_and_Bacterial_extracellular_solute-binding_protein


id: CL:3217
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3217_ABC_transporter_type_1,_transmembrane_domain_MetI-like,_and_Bacterial_extracellular_solute-binding_protein

description:
  ABC transporter type 1, transmembrane domain MetI-like, and Bacterial extracellular solute-binding protein


id: CL:3219
description: Regulation of nitrogen utilization, and ABC-type maltose transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3219_Regulation_of_nitrogen_utilization,_and_ABC-type_maltose_transporter_activity


id: CL:3235
description: ABC-type maltose transporter activity, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3235_ABC-type_maltose_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein


id: CL:3253
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3253_ATP-binding_cassette_(ABC)_transporter_complex,_substrate-binding_subunit-containing,_and_ABC-type_maltose_transporter_activity

description:
  ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing, and ABC-type maltose transporter activity


id: CL:3255
description: Enzyme regulator activity, and ABC-type maltose transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3255_Enzyme_regulator_activity,_and_ABC-type_maltose_transporter_activity


id: CL:3267
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3267_ATP-binding_cassette_(ABC)_transporter_complex,_substrate-binding_subunit-containing,_and_ABC-type_maltose_transporter_activity

description:
  ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing, and ABC-type maltose transporter activity


id: CL:3284
description: Regulation of nitrogen utilization, and ABC-type maltose transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3284_Regulation_of_nitrogen_utilization,_and_ABC-type_maltose_transporter_activity


id: CL:3314
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3314_Mixed,_incl._Allantoin_catabolic_process,_and_This_entry_represents_the_C-terminal_ligand_binding_domain_of_many_members_of_the_GntR_family._This_domain_probably_binds_to_a_range_of_effector_molecules_that_regulate_the_transcription_of_genes_through_the_action_of_the_N-terminal_DNA-binding_...

description:
  Mixed, incl. Allantoin catabolic process, and This entry represents the C-terminal ligand binding domain of many members of the GntR family. This domain probably binds to a range of effector molecules that regulate the transcription of genes through the action of the N-terminal DNA-binding ...


id: CL:3323
description: Phosphorelay signal transduction system, and Domain of unknown function DUF3502
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3323_Phosphorelay_signal_transduction_system,_and_Domain_of_unknown_function_DUF3502


id: CL:3325
description: Phosphorelay signal transduction system, and Domain of unknown function DUF3502
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3325_Phosphorelay_signal_transduction_system,_and_Domain_of_unknown_function_DUF3502


id: CL:3327
description: CdaR, GGDEF-like domain, and Cache domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3327_CdaR,_GGDEF-like_domain,_and_Cache_domain


id: CL:3329
description: CdaR, GGDEF-like domain, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3329_CdaR,_GGDEF-like_domain,_and_Histidine_kinase


id: CL:333
description: Mixed, incl. SpoU rRNA Methylase family, and GTP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:333_Mixed,_incl._SpoU_rRNA_Methylase_family,_and_GTP_binding_domain


id: CL:334
description: Mixed, incl. Ribonuclease III domain, and O-acetyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:334_Mixed,_incl._Ribonuclease_III_domain,_and_O-acetyltransferase_activity


id: CL:3356
description: Domain of unknown function DUF3502, and ABC transporter type 1, transmembrane domain MetI-like
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3356_Domain_of_unknown_function_DUF3502,_and_ABC_transporter_type_1,_transmembrane_domain_MetI-like


id: CL:3359
description: Domain of unknown function DUF3502, and ABC transporter type 1, transmembrane domain MetI-like
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3359_Domain_of_unknown_function_DUF3502,_and_ABC_transporter_type_1,_transmembrane_domain_MetI-like


id: CL:3387
description: Mixed, incl. Allantoin catabolic process, and Periplasmic binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3387_Mixed,_incl._Allantoin_catabolic_process,_and_Periplasmic_binding_protein_domain


id: CL:3396
description: Mixed, incl. HAD hydrolase, subfamily IA, and Protein of unknown function, DUF624
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3396_Mixed,_incl._HAD_hydrolase,_subfamily_IA,_and_Protein_of_unknown_function,_DUF624


id: CL:3408
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3408_Mixed,_incl._Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds,_and_Six-hairpin_glycosidase-like_superfamily

description:
  Mixed, incl. Hydrolase activity, hydrolyzing O-glycosyl compounds, and Six-hairpin glycosidase-like superfamily


id: CL:3409
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3409_Mixed,_incl._Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds,_and_Pentose_and_glucuronate_interconversions

description:
  Mixed, incl. Hydrolase activity, hydrolyzing O-glycosyl compounds, and Pentose and glucuronate interconversions


id: CL:3410
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3410_Mixed,_incl._Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds,_and_Pentose_and_glucuronate_interconversions

description:
  Mixed, incl. Hydrolase activity, hydrolyzing O-glycosyl compounds, and Pentose and glucuronate interconversions


id: CL:3411
description: Mixed, incl. Pentose and glucuronate interconversions, and Galactose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3411_Mixed,_incl._Pentose_and_glucuronate_interconversions,_and_Galactose_metabolism


id: CL:3413
description: Uronic acid metabolic process, and Hexitol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3413_Uronic_acid_metabolic_process,_and_Hexitol_metabolic_process


id: CL:3415
description: Uronic acid metabolic process, and Hexitol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3415_Uronic_acid_metabolic_process,_and_Hexitol_metabolic_process


id: CL:3441
description: Galactosidase activity, and Symporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3441_Galactosidase_activity,_and_Symporter_activity


id: CL:3453
description: Arabinose metabolic process, and Glycosyl hydrolases family 39
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3453_Arabinose_metabolic_process,_and_Glycosyl_hydrolases_family_39


id: CL:347
description: Mixed, incl. SpoU rRNA Methylase family, and G5 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:347_Mixed,_incl._SpoU_rRNA_Methylase_family,_and_G5_domain


id: CL:3471
description: Mixed, incl. Starch and sucrose metabolism, and Cellulose binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3471_Mixed,_incl._Starch_and_sucrose_metabolism,_and_Cellulose_binding_domain


id: CL:3473
description: Mixed, incl. Starch and sucrose metabolism, and Cellulose binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3473_Mixed,_incl._Starch_and_sucrose_metabolism,_and_Cellulose_binding_domain


id: CL:3475
description: Immunoglobulin-like fold, and Glycosyl hydrolase 94
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3475_Immunoglobulin-like_fold,_and_Glycosyl_hydrolase_94


id: CL:3477
description: Fibronectin type III-like domain, and Glycosyl hydrolase family 9
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3477_Fibronectin_type_III-like_domain,_and_Glycosyl_hydrolase_family_9


id: CL:3494
description: Galactose-binding-like domain superfamily, and Cellulose degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3494_Galactose-binding-like_domain_superfamily,_and_Cellulose_degradation


id: CL:3511
description: Mixed, incl. FAD binding, and Esterase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3511_Mixed,_incl._FAD_binding,_and_Esterase-like


id: CL:3530
description: Mixed, incl. Mannoside phosphorylase, and Glycosyltransferase Family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3530_Mixed,_incl._Mannoside_phosphorylase,_and_Glycosyltransferase_Family_4


id: CL:3544
description: Mixed, incl. Periplasmic binding protein-like I, and Transcription regulator HTH-like
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3544_Mixed,_incl._Periplasmic_binding_protein-like_I,_and_Transcription_regulator_HTH-like


id: CL:3546
description: Mixed, incl. Transcription regulator HTH-like, and LacI-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3546_Mixed,_incl._Transcription_regulator_HTH-like,_and_LacI-type_HTH_domain


id: CL:3547
description: Mixed, incl. Transcription regulator HTH-like, and LacI-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3547_Mixed,_incl._Transcription_regulator_HTH-like,_and_LacI-type_HTH_domain


id: CL:3551
description: AraC-type arabinose-binding/dimerisation domain, and Cupin 2, conserved barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3551_AraC-type_arabinose-binding/dimerisation_domain,_and_Cupin_2,_conserved_barrel


id: CL:3569
description: LacI-type HTH domain, and Import into cell
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3569_LacI-type_HTH_domain,_and_Import_into_cell


id: CL:3588
description: Mixed, incl. Protein acylation, and Major Facilitator Superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3588_Mixed,_incl._Protein_acylation,_and_Major_Facilitator_Superfamily


id: CL:359
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:359_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: CL:3604
description: Mixed, incl. Pentose and glucuronate interconversions, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3604_Mixed,_incl._Pentose_and_glucuronate_interconversions,_and_Periplasmic_binding_protein


id: CL:3605
description: Mixed, incl. Pentose and glucuronate interconversions, and D-xylose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3605_Mixed,_incl._Pentose_and_glucuronate_interconversions,_and_D-xylose_metabolic_process


id: CL:3606
description: Pentose and glucuronate interconversions, and Inositol catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3606_Pentose_and_glucuronate_interconversions,_and_Inositol_catabolic_process


id: CL:3609
description: Xylose metabolism, and Carbohydrate kinase, FGGY
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3609_Xylose_metabolism,_and_Carbohydrate_kinase,_FGGY


id: CL:3632
description: Mixed, incl. Threonine catabolic process, and Pyridine nucleotide-disulphide oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3632_Mixed,_incl._Threonine_catabolic_process,_and_Pyridine_nucleotide-disulphide_oxidoreductase


id: CL:3644
description: Periplasmic binding protein, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3644_Periplasmic_binding_protein,_and_ABC_transporter,_permease


id: CL:3653
description: Mixed, incl. Coat F domain, and Amino acid/polyamine transporter I
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3653_Mixed,_incl._Coat_F_domain,_and_Amino_acid/polyamine_transporter_I


id: CL:3655
description: Mixed, incl. Coat F domain, and Xylan degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3655_Mixed,_incl._Coat_F_domain,_and_Xylan_degradation


id: CL:3673
description: Amino acid/polyamine transporter I, and Alpha-amylase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3673_Amino_acid/polyamine_transporter_I,_and_Alpha-amylase_domain


id: CL:3686
description: Mostly uncharacterized, incl. MatE, and SNARE associated Golgi protein
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3686_Mostly_uncharacterized,_incl._MatE,_and_SNARE_associated_Golgi_protein


id: CL:3688
description: Mixed, incl. MatE, and SNARE associated Golgi protein
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3688_Mixed,_incl._MatE,_and_SNARE_associated_Golgi_protein


id: CL:3707
description: Mixed, incl. Response to arsenic-containing substance, and DNA recombination
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3707_Mixed,_incl._Response_to_arsenic-containing_substance,_and_DNA_recombination


id: CL:3708
description: Mixed, incl. Response to arsenic-containing substance, and Transposition
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3708_Mixed,_incl._Response_to_arsenic-containing_substance,_and_Transposition


id: CL:3709
description: Mixed, incl. Response to arsenic-containing substance, and Transposition
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3709_Mixed,_incl._Response_to_arsenic-containing_substance,_and_Transposition


id: CL:371
description: Mixed, incl. Protein processing, and Nucleus
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:371_Mixed,_incl._Protein_processing,_and_Nucleus


id: CL:3710
description: Mixed, incl. Response to arsenic-containing substance, and DNA modification
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3710_Mixed,_incl._Response_to_arsenic-containing_substance,_and_DNA_modification


id: CL:3712
description: Mixed, incl. Response to arsenic-containing substance, and Methyltransferase type 11
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3712_Mixed,_incl._Response_to_arsenic-containing_substance,_and_Methyltransferase_type_11


id: CL:3715
description: Response to arsenic-containing substance
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3715_Response_to_arsenic-containing_substance


id: CL:372
description: Mixed, incl. Nucleus, and Ribosome assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:372_Mixed,_incl._Nucleus,_and_Ribosome_assembly


id: CL:3736
description: Mixed, incl. DNA modification, and Transposition
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3736_Mixed,_incl._DNA_modification,_and_Transposition


id: CL:3738
description: DNA modification, and Regulation of transcription, DNA-templated
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3738_DNA_modification,_and_Regulation_of_transcription,_DNA-templated


id: CL:374
description: Mixed, incl. Ribosome assembly, and Ribonuclease III domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:374_Mixed,_incl._Ribosome_assembly,_and_Ribonuclease_III_domain


id: CL:3757
description: Transposase activity, and Peroxidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3757_Transposase_activity,_and_Peroxidase_activity


id: CL:3769
description: Mixed, incl. IrrE N-terminal-like domain, and Type IV leader peptidase family
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3769_Mixed,_incl._IrrE_N-terminal-like_domain,_and_Type_IV_leader_peptidase_family


id: CL:3781
description: Mixed, incl. Resolvase, N terminal domain, and Catalase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3781_Mixed,_incl._Resolvase,_N_terminal_domain,_and_Catalase_activity


id: CL:3783
description: Catalase activity, and Calcineurin-like phosphoesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3783_Catalase_activity,_and_Calcineurin-like_phosphoesterase


id: CL:3804
description: Mostly uncharacterized, incl. YefM-like superfamily, and Metal-dependent hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3804_Mostly_uncharacterized,_incl._YefM-like_superfamily,_and_Metal-dependent_hydrolase


id: CL:3805
description: Mixed, incl. Metal-dependent hydrolase, and Zinc-ribbon domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3805_Mixed,_incl._Metal-dependent_hydrolase,_and_Zinc-ribbon_domain


id: CL:3808
description: Mixed, incl. Membrane-bounded organelle, and NAD binding
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3808_Mixed,_incl._Membrane-bounded_organelle,_and_NAD_binding


id: CL:3819
description: Mixed, incl. Metal-dependent hydrolase, and Zinc-ribbon domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3819_Mixed,_incl._Metal-dependent_hydrolase,_and_Zinc-ribbon_domain


id: CL:3832
description: Mixed, incl. YefM-like superfamily, and PHP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3832_Mixed,_incl._YefM-like_superfamily,_and_PHP_domain


id: CL:3833
description: Mixed, incl. PHP domain, and TSCPD domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3833_Mixed,_incl._PHP_domain,_and_TSCPD_domain


id: CL:3844
description: Mixed, incl. YefM-like superfamily, and Negative regulation of translational initiation
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3844_Mixed,_incl._YefM-like_superfamily,_and_Negative_regulation_of_translational_initiation


id: CL:3855
description: Mixed, incl. Protein of unknown function DUF5104, and MafB19-like deaminase
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3855_Mixed,_incl._Protein_of_unknown_function_DUF5104,_and_MafB19-like_deaminase


id: CL:3858
description: Protein of unknown function DUF5104, and CBM2/CBM3, carbohydrate-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3858_Protein_of_unknown_function_DUF5104,_and_CBM2/CBM3,_carbohydrate-binding_domain_superfamily


id: CL:3872
description: Mixed, incl. MafB19-like deaminase, and CAAX-box protein processing
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3872_Mixed,_incl._MafB19-like_deaminase,_and_CAAX-box_protein_processing


id: CL:3893
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3893_Mixed,_incl._Biological_process_involved_in_symbiotic_interaction,_and_P-loop_containing_nucleoside_triphosphate_hydrolase

description:
  Mixed, incl. Biological process involved in symbiotic interaction, and P-loop containing nucleoside triphosphate hydrolase


id: CL:3920
description: Mixed, incl. Helix-turn-helix XRE-family like proteins, and Phosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:3920_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Phosphorylation


id: CL:396
description: Peptidase S26, and RNA-DNA hybrid ribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:396_Peptidase_S26,_and_RNA-DNA_hybrid_ribonuclease_activity


id: CL:410
description: Mixed, incl. Protein kinase domain, and rRNA methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:410_Mixed,_incl._Protein_kinase_domain,_and_rRNA_methyltransferase_activity


id: CL:412
description: rRNA methyltransferase activity, and Formyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:412_rRNA_methyltransferase_activity,_and_Formyl_transferase


id: CL:422
description: Protein kinase domain, and Protein dephosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:422_Protein_kinase_domain,_and_Protein_dephosphorylation


id: CL:439
description: Catalytic activity, acting on DNA, and DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:439_Catalytic_activity,_acting_on_DNA,_and_DNA_replication


id: CL:440
description: Catalytic activity, acting on DNA, and DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:440_Catalytic_activity,_acting_on_DNA,_and_DNA_replication


id: CL:443
description: Mixed, incl. Mismatch repair, and Topoisomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:443_Mixed,_incl._Mismatch_repair,_and_Topoisomerase


id: CL:447
description: Nucleotide excision repair, and DNA damage sensor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:447_Nucleotide_excision_repair,_and_DNA_damage_sensor_activity


id: CL:449
description: Mismatch repair, and DNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:449_Mismatch_repair,_and_DNA_ligase_activity


id: CL:490
description: Mixed, incl. DNA topoisomerase, type IIA-like domain superfamily, and DNA replication initiation
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:490_Mixed,_incl._DNA_topoisomerase,_type_IIA-like_domain_superfamily,_and_DNA_replication_initiation


id: CL:510
description: Primosome complex, and Helix-turn-helix, type 11
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:510_Primosome_complex,_and_Helix-turn-helix,_type_11


id: CL:527
description: Mixed, incl. Holliday junction helicase complex, and dGTP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:527_Mixed,_incl._Holliday_junction_helicase_complex,_and_dGTP_metabolic_process


id: CL:540
description: Mixed, incl. UmuC domain, and Peptidase S24-like
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:540_Mixed,_incl._UmuC_domain,_and_Peptidase_S24-like


id: CL:559
description: Mixed, incl. ParB/Sulfiredoxin, and MnmG, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:559_Mixed,_incl._ParB/Sulfiredoxin,_and_MnmG,_N-terminal_domain


id: CL:574
description: Mixed, incl. Identical protein binding, and S4 RNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:574_Mixed,_incl._Identical_protein_binding,_and_S4_RNA-binding_domain


id: CL:576
description: Identical protein binding, and Thylakoid
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:576_Identical_protein_binding,_and_Thylakoid


id: CL:598
description: Mixed, incl. Deoxyribonucleotide biosynthetic process, and TGS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:598_Mixed,_incl._Deoxyribonucleotide_biosynthetic_process,_and_TGS_domain


id: CL:611
description: Mixed, incl. Terpenoid backbone biosynthesis, and Nicotinate and nicotinamide metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:611_Mixed,_incl._Terpenoid_backbone_biosynthesis,_and_Nicotinate_and_nicotinamide_metabolism


id: CL:612
description: Mixed, incl. Nicotinate and nicotinamide metabolism, and DNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:612_Mixed,_incl._Nicotinate_and_nicotinamide_metabolism,_and_DNA_catabolic_process


id: CL:614
description: DNA catabolic process, and NusB family
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:614_DNA_catabolic_process,_and_NusB_family


id: CL:631
description: Nicotinate and nicotinamide metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:631_Nicotinate_and_nicotinamide_metabolism


id: CL:646
description: Terpenoid backbone biosynthesis, and Peptidase family M50
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:646_Terpenoid_backbone_biosynthesis,_and_Peptidase_family_M50


id: CL:658
description: Mixed, incl. Peptidase family M50, and Cyclo-ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:658_Mixed,_incl._Peptidase_family_M50,_and_Cyclo-ligase_activity


id: CL:66
description: Translation, and RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:66_Translation,_and_RNA_metabolic_process


id: CL:668
description: Mixed, incl. Carbon metabolism, and Small molecule biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:668_Mixed,_incl._Carbon_metabolism,_and_Small_molecule_biosynthetic_process


id: CL:669
description: Mixed, incl. Pyruvate metabolism, and Fatty acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:669_Mixed,_incl._Pyruvate_metabolism,_and_Fatty_acid_biosynthetic_process


id: CL:670
description: Mixed, incl. Pyruvate metabolism, and Fatty acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:670_Mixed,_incl._Pyruvate_metabolism,_and_Fatty_acid_biosynthetic_process


id: CL:672
description: Pyruvate metabolism, and Branched-chain amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:672_Pyruvate_metabolism,_and_Branched-chain_amino_acid_metabolic_process


id: CL:674
description: Valine, leucine and isoleucine biosynthesis, and Citrate cycle (TCA cycle)
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:674_Valine,_leucine_and_isoleucine_biosynthesis,_and_Citrate_cycle_(TCA_cycle)


id: CL:679
description: Pyruvate:ferredoxin oxidoreductase, core domain II, and Dicarboxylic acid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:679_Pyruvate:ferredoxin_oxidoreductase,_core_domain_II,_and_Dicarboxylic_acid_catabolic_process


id: CL:68
description: Translation, and Bacterial secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:68_Translation,_and_Bacterial_secretion_system


id: CL:69
description: Translation, and Bacterial secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:69_Translation,_and_Bacterial_secretion_system


id: CL:690
description: Taurine and hypotaurine metabolism, and Tyrosine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:690_Taurine_and_hypotaurine_metabolism,_and_Tyrosine_metabolism


id: CL:702
description: Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:702_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:72
description: Translation, and Bacterial secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:72_Translation,_and_Bacterial_secretion_system


id: CL:73
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:73_Ribosome,_and_Translation_regulator_activity


id: CL:74
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:74_Ribosome,_and_Translation_regulator_activity


id: CL:742
description: Mixed, incl. Fatty acid biosynthetic process, and KR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:742_Mixed,_incl._Fatty_acid_biosynthetic_process,_and_KR_domain


id: CL:743
description: Fatty acid metabolism, and Phosphopantetheine binding
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:743_Fatty_acid_metabolism,_and_Phosphopantetheine_binding


id: CL:75
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:75_Ribosome,_and_Translation_regulator_activity


id: CL:77
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:77_Ribosome,_and_Translation_regulator_activity


id: CL:772
description: Phosphopantetheine binding, and S-acyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:772_Phosphopantetheine_binding,_and_S-acyltransferase_activity


id: CL:786
description: Mixed, incl. Acyl carrier activity, and Peptidase M16, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:786_Mixed,_incl._Acyl_carrier_activity,_and_Peptidase_M16,_C-terminal


id: CL:789
description: Peptidase M16, C-terminal, and Thylakoid
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:789_Peptidase_M16,_C-terminal,_and_Thylakoid


id: CL:79
description: Ribosome, and Translational elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:79_Ribosome,_and_Translational_elongation


id: CL:805
description: Mixed, incl. Protein folding, and AhpC/TSA family
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:805_Mixed,_incl._Protein_folding,_and_AhpC/TSA_family


id: CL:806
description: Protein folding, and Serine protease
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:806_Protein_folding,_and_Serine_protease


id: CL:81
description: Ribosome, and Translational elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:81_Ribosome,_and_Translational_elongation


id: CL:843
description: Mixed, incl. AhpC/TSA family, and Response to superoxide
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:843_Mixed,_incl._AhpC/TSA_family,_and_Response_to_superoxide


id: CL:844
description: AhpC/TSA family, and FAD/NAD(P)-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:844_AhpC/TSA_family,_and_FAD/NAD(P)-binding_domain


id: CL:857
description: AMP-binding, conserved site, and Rotamase
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:857_AMP-binding,_conserved_site,_and_Rotamase


id: CL:866
description: Pentose phosphate pathway, and Glycolytic process
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:866_Pentose_phosphate_pathway,_and_Glycolytic_process


id: CL:867
description: Pentose phosphate pathway, and Glycolytic process
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:867_Pentose_phosphate_pathway,_and_Glycolytic_process


id: CL:868
description: Pentose phosphate pathway, and Glycolytic process
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:868_Pentose_phosphate_pathway,_and_Glycolytic_process


id: CL:889
description: Transketolase, thiamine diphosphate binding domain, and Transketolase, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:889_Transketolase,_thiamine_diphosphate_binding_domain,_and_Transketolase,_C-terminal_domain


id: CL:904
description: Streptomycin biosynthesis, and Membrane raft
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:904_Streptomycin_biosynthesis,_and_Membrane_raft


id: CL:929
description: Biosynthesis of amino acids, and Ribonucleoside monophosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:929_Biosynthesis_of_amino_acids,_and_Ribonucleoside_monophosphate_biosynthetic_process


id: CL:930
description: Amino-acid biosynthesis, and Ribonucleoside monophosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:930_Amino-acid_biosynthesis,_and_Ribonucleoside_monophosphate_biosynthetic_process


id: CL:932
description: Phenylalanine, tyrosine and tryptophan biosynthesis, and Histidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:932_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis,_and_Histidine_metabolism


id: CL:934
description: Phenylalanine, tyrosine and tryptophan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:934_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis


id: CL:966
description: Histidine metabolism, and Guanylate kinase-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:966_Histidine_metabolism,_and_Guanylate_kinase-like_domain


id: CL:97
description: Mixed, incl. Small ribosomal subunit, and K Homology domain, type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:97_Mixed,_incl._Small_ribosomal_subunit,_and_K_Homology_domain,_type_2


id: CL:993
description: Lysine biosynthesis, and Glutamine family amino acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:993_Lysine_biosynthesis,_and_Glutamine_family_amino_acid_biosynthetic_process


id: CL:994
description: Lysine biosynthesis, and Glutamine family amino acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:994_Lysine_biosynthesis,_and_Glutamine_family_amino_acid_biosynthetic_process


id: CL:996
description: Threonine biosynthetic process, and Lysine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_29343_STRINGid_CL:996_Threonine_biosynthetic_process,_and_Lysine_biosynthesis


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 10
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0002926
description: tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation
memo: https://amigo.geneontology.org/amigo/term/GO:0002926
golevel: 13
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0002926_tRNA_wobble_base_5-methoxycarbonylmethyl-2-thiouridinylation


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 6
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0003992
description: N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003992
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0003992_N2-acetyl-L-ornithine:2-oxoglutarate_5-aminotransferase_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
golevel: 6
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 6
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004648
description: O-phospho-L-serine:2-oxoglutarate aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004648
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0004648_O-phospho-L-serine:2-oxoglutarate_aminotransferase_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0006303
description: Double-strand break repair via nonhomologous end joining
memo: https://amigo.geneontology.org/amigo/term/GO:0006303
golevel: 9
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0006303_Double-strand_break_repair_via_nonhomologous_end_joining


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 11
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0008263
description: Pyrimidine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008263
golevel: 7
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0008263_Pyrimidine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 7
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008685
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008685
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0008685_2-C-methyl-D-erythritol_2,4-cyclodiphosphate_synthase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
golevel: 6
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008780
description: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008780
golevel: 6
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0008780_acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine_O-acyltransferase_activity


id: GO:0008817
description: cob(I)yrinic acid a,c-diamide adenosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008817
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0008817_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 6
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 9
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 9
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 10
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 9
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 10
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 9
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 10
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 9
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 10
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009210
description: Pyrimidine ribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009210
golevel: 10
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0009210_Pyrimidine_ribonucleoside_triphosphate_catabolic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 9
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 10
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 10
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 9
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 10
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009401
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system
memo: https://amigo.geneontology.org/amigo/term/GO:0009401
golevel: 8
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0009401_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 6
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 6
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 6
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
golevel: 3
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015975
description: Energy derivation by oxidation of reduced inorganic compounds
memo: https://amigo.geneontology.org/amigo/term/GO:0015975
golevel: 4
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0015975_Energy_derivation_by_oxidation_of_reduced_inorganic_compounds


id: GO:0015988
description: Energy coupled proton transmembrane transport, against electrochemical gradient
memo: https://amigo.geneontology.org/amigo/term/GO:0015988
golevel: 8
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0015988_Energy_coupled_proton_transmembrane_transport,_against_electrochemical_gradient


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016624
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016624
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016624_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_disulfide_as_acceptor


id: GO:0016625
memo: https://amigo.geneontology.org/amigo/term/GO:0016625
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016625_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_iron-sulfur_protein_as_acceptor

description:
  Oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016641
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016641
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016641_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_oxygen_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016652
description: Oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016652
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016652_Oxidoreductase_activity,_acting_on_NAD(P)H,_NAD(P)_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016661
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016661
golevel: 3
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016661_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016699
description: Oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016699
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016699_Oxidoreductase_activity,_acting_on_hydrogen_as_donor,_iron-sulfur_protein_as_acceptor


id: GO:0016705
memo: https://amigo.geneontology.org/amigo/term/GO:0016705
golevel: 3
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016705_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: GO:0016721
description: Oxidoreductase activity, acting on superoxide radicals as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016721
golevel: 3
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016721_Oxidoreductase_activity,_acting_on_superoxide_radicals_as_acceptor


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016730
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016730
golevel: 3
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016730_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors


id: GO:0016732
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors, dinitrogen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016732
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016732_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_dinitrogen_as_acceptor


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
golevel: 6
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016868
description: Intramolecular transferase activity, phosphotransferases
memo: https://amigo.geneontology.org/amigo/term/GO:0016868
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016868_Intramolecular_transferase_activity,_phosphotransferases


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016888
description: Endodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016888
golevel: 7
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016888_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016889
description: Endodeoxyribonuclease activity, producing 3-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016889
golevel: 7
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016889_Endodeoxyribonuclease_activity,_producing_3-phosphomonoesters


id: GO:0016891
description: Endoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016891
golevel: 7
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016891_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016892
description: Endoribonuclease activity, producing 3-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016892
golevel: 7
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016892_Endoribonuclease_activity,_producing_3-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
golevel: 6
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016894
memo: https://amigo.geneontology.org/amigo/term/GO:0016894
golevel: 6
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016894_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_3-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3-phosphomonoesters


id: GO:0016895
description: Exodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016895
golevel: 7
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016895_Exodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016903
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016903
golevel: 3
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0016903_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors


id: GO:0018339
description: peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid
memo: https://amigo.geneontology.org/amigo/term/GO:0018339
golevel: 8
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0018339_peptidyl-L-beta-methylthioaspartic_acid_biosynthetic_process_from_peptidyl-aspartic_acid


id: GO:0019171
description: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019171
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0019171_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0019219
description: Regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019219
golevel: 5
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0019219_Regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0019279
description: L-methionine biosynthetic process from L-homoserine via cystathionine
memo: https://amigo.geneontology.org/amigo/term/GO:0019279
golevel: 13
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0019279_L-methionine_biosynthetic_process_from_L-homoserine_via_cystathionine


id: GO:0019281
description: L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
memo: https://amigo.geneontology.org/amigo/term/GO:0019281
golevel: 14
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0019281_L-methionine_biosynthetic_process_from_homoserine_via_O-succinyl-L-homoserine_and_cystathionine


id: GO:0019288
description: Isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0019288
golevel: 8
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0019288_Isopentenyl_diphosphate_biosynthetic_process,_methylerythritol_4-phosphate_pathway


id: GO:0019829
description: ATPase-coupled cation transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019829
golevel: 6
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0019829_ATPase-coupled_cation_transmembrane_transporter_activity


id: GO:0030604
description: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0030604
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0030604_1-deoxy-D-xylulose-5-phosphate_reductoisomerase_activity


id: GO:0030613
description: Oxidoreductase activity, acting on phosphorus or arsenic in donors
memo: https://amigo.geneontology.org/amigo/term/GO:0030613
golevel: 3
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0030613_Oxidoreductase_activity,_acting_on_phosphorus_or_arsenic_in_donors


id: GO:0030614
description: Oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0030614
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0030614_Oxidoreductase_activity,_acting_on_phosphorus_or_arsenic_in_donors,_disulfide_as_acceptor


id: GO:0030698
description: 5,10-methylenetetrahydrofolate-dependent tRNA (m5U54) methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0030698
golevel: 9
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0030698_5,10-methylenetetrahydrofolate-dependent_tRNA_(m5U54)_methyltransferase_activity


id: GO:0031234
description: Extrinsic component of cytoplasmic side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031234
golevel: 6
name:
  GOCC.STRING_v12.0_29343_STRINGid_GO:0031234_Extrinsic_component_of_cytoplasmic_side_of_plasma_membrane


id: GO:0032105
description: Negative regulation of response to extracellular stimulus
memo: https://amigo.geneontology.org/amigo/term/GO:0032105
golevel: 6
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0032105_Negative_regulation_of_response_to_extracellular_stimulus


id: GO:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
golevel: 3
name:
  GOCC.STRING_v12.0_29343_STRINGid_GO:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GO:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
golevel: 3
name:
  GOCC.STRING_v12.0_29343_STRINGid_GO:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GO:0033283
description: ATPase-coupled organic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033283
golevel: 6
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0033283_ATPase-coupled_organic_acid_transmembrane_transporter_activity


id: GO:0033284
description: ATPase-coupled carboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033284
golevel: 7
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0033284_ATPase-coupled_carboxylic_acid_transmembrane_transporter_activity


id: GO:0033362
description: Lysine biosynthetic process via diaminopimelate, diaminopimelate-aminotransferase pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0033362
golevel: 12
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0033362_Lysine_biosynthetic_process_via_diaminopimelate,_diaminopimelate-aminotransferase_pathway


id: GO:0033668
description: Negative regulation by symbiont of host apoptotic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033668
golevel: 8
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0033668_Negative_regulation_by_symbiont_of_host_apoptotic_process


id: GO:0033818
description: Beta-ketoacyl-acyl-carrier-protein synthase III activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033818
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0033818_Beta-ketoacyl-acyl-carrier-protein_synthase_III_activity


id: GO:0034023
description: 5-(carboxyamino)imidazole ribonucleotide mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034023
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0034023_5-(carboxyamino)imidazole_ribonucleotide_mutase_activity


id: GO:0034404
description: Nucleobase-containing small molecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034404
golevel: 6
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0034404_Nucleobase-containing_small_molecule_biosynthetic_process


id: GO:0035592
description: Establishment of protein localization to extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0035592
golevel: 6
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0035592_Establishment_of_protein_localization_to_extracellular_region


id: GO:0035598
description: N6-threonylcarbomyladenosine methylthiotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0035598
golevel: 6
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0035598_N6-threonylcarbomyladenosine_methylthiotransferase_activity


id: GO:0036361
description: Racemase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0036361
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0036361_Racemase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0036381
description: Pyridoxal 5-phosphate synthase (glutamine hydrolysing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0036381
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0036381_Pyridoxal_5-phosphate_synthase_(glutamine_hydrolysing)_activity


id: GO:0042083
description: 5,10-methylenetetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042083
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0042083_5,10-methylenetetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042084
description: 5-methyltetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042084
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0042084_5-methyltetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042173
description: Regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042173
golevel: 6
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0042173_Regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0042174
description: Negative regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042174
golevel: 7
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0042174_Negative_regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0042777
description: Proton motive force-driven plasma membrane ATP synthesis
memo: https://amigo.geneontology.org/amigo/term/GO:0042777
golevel: 13
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0042777_Proton_motive_force-driven_plasma_membrane_ATP_synthesis


id: GO:0043242
description: Negative regulation of protein-containing complex disassembly
memo: https://amigo.geneontology.org/amigo/term/GO:0043242
golevel: 7
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0043242_Negative_regulation_of_protein-containing_complex_disassembly


id: GO:0043772
description: Acyl-phosphate glycerol-3-phosphate acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043772
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0043772_Acyl-phosphate_glycerol-3-phosphate_acyltransferase_activity


id: GO:0043811
description: Phosphate:acyl-[acyl carrier protein] acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043811
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0043811_Phosphate:acyl-[acyl_carrier_protein]_acyltransferase_activity


id: GO:0044419
description: Biological process involved in interspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0044419
golevel: 1
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0044419_Biological_process_involved_in_interspecies_interaction_between_organisms


id: GO:0044769
description: ATPase activity, coupled to transmembrane movement of ions, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0044769
golevel: 7
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0044769_ATPase_activity,_coupled_to_transmembrane_movement_of_ions,_rotational_mechanism


id: GO:0045261
description: Proton-transporting ATP synthase complex, catalytic core F(1)
memo: https://amigo.geneontology.org/amigo/term/GO:0045261
golevel: 6
name:
  GOCC.STRING_v12.0_29343_STRINGid_GO:0045261_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: GO:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
golevel: 6
name:
  GOCC.STRING_v12.0_29343_STRINGid_GO:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GO:0045304
description: Regulation of establishment of competence for transformation
memo: https://amigo.geneontology.org/amigo/term/GO:0045304
golevel: 6
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0045304_Regulation_of_establishment_of_competence_for_transformation


id: GO:0045881
description: Positive regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0045881
golevel: 7
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0045881_Positive_regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0045934
description: Negative regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045934
golevel: 6
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0045934_Negative_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0045935
description: Positive regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045935
golevel: 6
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0045935_Positive_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0046429
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046429
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0046429_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_synthase_activity


id: GO:0046537
description: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046537
golevel: 6
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0046537_2,3-bisphosphoglycerate-independent_phosphoglycerate_mutase_activity


id: GO:0046912
description: Acyltransferase activity, acyl groups converted into alkyl on transfer
memo: https://amigo.geneontology.org/amigo/term/GO:0046912
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0046912_Acyltransferase_activity,_acyl_groups_converted_into_alkyl_on_transfer


id: GO:0046933
description: Proton-transporting ATP synthase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046933
golevel: 8
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0046933_Proton-transporting_ATP_synthase_activity,_rotational_mechanism


id: GO:0046961
description: Proton-transporting ATPase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046961
golevel: 8
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0046961_Proton-transporting_ATPase_activity,_rotational_mechanism


id: GO:0047151
description: methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase (FADH2-oxidizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047151
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0047151_methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase_(FADH2-oxidizing)_activity


id: GO:0047451
description: 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047451
golevel: 6
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0047451_3-hydroxyoctanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0047480
description: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047480
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0047480_UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine_ligase_activity


id: GO:0048646
description: Anatomical structure formation involved in morphogenesis
memo: https://amigo.geneontology.org/amigo/term/GO:0048646
golevel: 2
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0048646_Anatomical_structure_formation_involved_in_morphogenesis


id: GO:0050511
description: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050511
golevel: 6
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0050511_Undecaprenyldiphospho-muramoylpentapeptide_beta-N-acetylglucosaminyltransferase_activity


id: GO:0050515
description: 4-(cytidine 5-diphospho)-2-C-methyl-D-erythritol kinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050515
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0050515_4-(cytidine_5-diphospho)-2-C-methyl-D-erythritol_kinase_activity


id: GO:0050518
description: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050518
golevel: 6
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0050518_2-C-methyl-D-erythritol_4-phosphate_cytidylyltransferase_activity


id: GO:0050566
description: asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050566
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0050566_asparaginyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0050567
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050567
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0050567_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0051075
description: S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051075
golevel: 3
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0051075_S-adenosylmethionine:tRNA_ribosyltransferase-isomerase_activity


id: GO:0051172
description: Negative regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051172
golevel: 5
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0051172_Negative_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051173
description: Positive regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051173
golevel: 5
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0051173_Positive_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051703
description: Biological process involved in intraspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0051703
golevel: 1
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0051703_Biological_process_involved_in_intraspecies_interaction_between_organisms


id: GO:0051745
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051745
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0051745_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_reductase_activity


id: GO:0051748
description: UTP-monosaccharide-1-phosphate uridylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051748
golevel: 6
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0051748_UTP-monosaccharide-1-phosphate_uridylyltransferase_activity


id: GO:0051991
memo: https://amigo.geneontology.org/amigo/term/GO:0051991
golevel: 6
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0051991_UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol_4-beta-N-acetylglucosaminlytransferase_activity

description:
  UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity


id: GO:0051992
memo: https://amigo.geneontology.org/amigo/term/GO:0051992
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0051992_UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate_transferase_activity

description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity


id: GO:0052041
description: Negative regulation by symbiont of host programmed cell death
memo: https://amigo.geneontology.org/amigo/term/GO:0052041
golevel: 7
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0052041_Negative_regulation_by_symbiont_of_host_programmed_cell_death


id: GO:0052592
description: Oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0052592
golevel: 4
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0052592_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_with_an_iron-sulfur_protein_as_acceptor


id: GO:0052908
description: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052908
golevel: 9
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0052908_16S_rRNA_(adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase_activity


id: GO:0055052
description: ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing
memo: https://amigo.geneontology.org/amigo/term/GO:0055052
golevel: 7
name:
  GOCC.STRING_v12.0_29343_STRINGid_GO:0055052_ATP-binding_cassette_(ABC)_transporter_complex,_substrate-binding_subunit-containing


id: GO:0060567
description: Negative regulation of DNA-templated transcription, termination
memo: https://amigo.geneontology.org/amigo/term/GO:0060567
golevel: 12
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0060567_Negative_regulation_of_DNA-templated_transcription,_termination


id: GO:0061695
description: Transferase complex, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0061695
golevel: 4
name:
  GOCC.STRING_v12.0_29343_STRINGid_GO:0061695_Transferase_complex,_transferring_phosphorus-containing_groups


id: GO:0070626
memo: https://amigo.geneontology.org/amigo/term/GO:0070626
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0070626_(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)_succinate_lyase_(fumarate-forming)_activity

description:
  (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity


id: GO:0070647
description: Protein modification by small protein conjugation or removal
memo: https://amigo.geneontology.org/amigo/term/GO:0070647
golevel: 6
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0070647_Protein_modification_by_small_protein_conjugation_or_removal


id: GO:0072599
description: Establishment of protein localization to endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0072599
golevel: 7
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0072599_Establishment_of_protein_localization_to_endoplasmic_reticulum


id: GO:0097588
description: Archaeal or bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:0097588
golevel: 4
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0097588_Archaeal_or_bacterial-type_flagellum-dependent_cell_motility


id: GO:0102027
description: S-adenosylmethionine:2-demethylquinol-8 methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102027
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0102027_S-adenosylmethionine:2-demethylquinol-8_methyltransferase_activity


id: GO:0102094
description: S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102094
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0102094_S-adenosylmethionine:2-demethylmenaquinol_methyltransferase_activity


id: GO:0102955
description: S-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102955
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0102955_S-adenosylmethionine:2-demethylmenaquinol-7_methyltransferase_activity


id: GO:0106074
description: aminoacyl-tRNA metabolism involved in translational fidelity
memo: https://amigo.geneontology.org/amigo/term/GO:0106074
golevel: 9
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:0106074_aminoacyl-tRNA_metabolism_involved_in_translational_fidelity


id: GO:0140078
description: Class I DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0140078
golevel: 5
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:0140078_Class_I_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:1901505
description: Carbohydrate derivative transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:1901505
golevel: 3
name:
  GOMF.STRING_v12.0_29343_STRINGid_GO:1901505_Carbohydrate_derivative_transmembrane_transporter_activity


id: GO:1902021
description: Regulation of bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:1902021
golevel: 6
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:1902021_Regulation_of_bacterial-type_flagellum-dependent_cell_motility


id: GO:1903507
description: Negative regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903507
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:1903507_Negative_regulation_of_nucleic_acid-templated_transcription


id: GO:1903508
description: Positive regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903508
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:1903508_Positive_regulation_of_nucleic_acid-templated_transcription


id: GO:2000112
description: Regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000112
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:2000112_Regulation_of_cellular_macromolecule_biosynthetic_process


id: GO:2000113
description: Negative regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000113
name:
  GOBP.STRING_v12.0_29343_STRINGid_GO:2000113_Negative_regulation_of_cellular_macromolecule_biosynthetic_process


id: GOCC:0000015
description: Phosphopyruvate hydratase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000015
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0000015_Phosphopyruvate_hydratase_complex


id: GOCC:0000159
description: Protein phosphatase type 2A complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000159
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0000159_Protein_phosphatase_type_2A_complex


id: GOCC:0000172
description: Ribonuclease MRP complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000172
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0000172_Ribonuclease_MRP_complex


id: GOCC:0000221
description: Vacuolar proton-transporting V-type ATPase, V1 domain
memo: https://amigo.geneontology.org/amigo/term/GO:0000221
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0000221_Vacuolar_proton-transporting_V-type_ATPase,_V1_domain


id: GOCC:0000428
description: DNA-directed RNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000428
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0000428_DNA-directed_RNA_polymerase_complex


id: GOCC:0000775
description: Chromosome, centromeric region
memo: https://amigo.geneontology.org/amigo/term/GO:0000775
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0000775_Chromosome,_centromeric_region


id: GOCC:0000779
description: Condensed chromosome, centromeric region
memo: https://amigo.geneontology.org/amigo/term/GO:0000779
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0000779_Condensed_chromosome,_centromeric_region


id: GOCC:0000781
description: Chromosome, telomeric region
memo: https://amigo.geneontology.org/amigo/term/GO:0000781
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0000781_Chromosome,_telomeric_region


id: GOCC:0000793
description: Condensed chromosome
memo: https://amigo.geneontology.org/amigo/term/GO:0000793
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0000793_Condensed_chromosome


id: GOCC:0000930
description: Gamma-tubulin complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000930
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0000930_Gamma-tubulin_complex


id: GOCC:0000931
description: Gamma-tubulin large complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000931
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0000931_Gamma-tubulin_large_complex


id: GOCC:0002189
description: Ribose phosphate diphosphokinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0002189
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0002189_Ribose_phosphate_diphosphokinase_complex


id: GOCC:0005576
description: Extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0005576
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0005576_Extracellular_region


id: GOCC:0005615
description: Extracellular space
memo: https://amigo.geneontology.org/amigo/term/GO:0005615
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0005615_Extracellular_space


id: GOCC:0005727
description: Extrachromosomal circular DNA
memo: https://amigo.geneontology.org/amigo/term/GO:0005727
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0005727_Extrachromosomal_circular_DNA


id: GOCC:0005732
description: Small nucleolar ribonucleoprotein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005732
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0005732_Small_nucleolar_ribonucleoprotein_complex


id: GOCC:0005759
description: Mitochondrial matrix
memo: https://amigo.geneontology.org/amigo/term/GO:0005759
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0005759_Mitochondrial_matrix


id: GOCC:0005783
description: Endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0005783
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0005783_Endoplasmic_reticulum


id: GOCC:0005788
description: Endoplasmic reticulum lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0005788
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0005788_Endoplasmic_reticulum_lumen


id: GOCC:0005789
description: Endoplasmic reticulum membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005789
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0005789_Endoplasmic_reticulum_membrane


id: GOCC:0005815
description: Microtubule organizing center
memo: https://amigo.geneontology.org/amigo/term/GO:0005815
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0005815_Microtubule_organizing_center


id: GOCC:0005835
description: Fatty acid synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005835
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0005835_Fatty_acid_synthase_complex


id: GOCC:0005882
description: Intermediate filament
memo: https://amigo.geneontology.org/amigo/term/GO:0005882
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0005882_Intermediate_filament


id: GOCC:0005887
description: Integral component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005887
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0005887_Integral_component_of_plasma_membrane


id: GOCC:0005945
description: 6-phosphofructokinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005945
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0005945_6-phosphofructokinase_complex


id: GOCC:0005948
description: Acetolactate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005948
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0005948_Acetolactate_synthase_complex


id: GOCC:0005951
description: Carbamoyl-phosphate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005951
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0005951_Carbamoyl-phosphate_synthase_complex


id: GOCC:0005963
description: Magnesium-dependent protein serine/threonine phosphatase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005963
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0005963_Magnesium-dependent_protein_serine/threonine_phosphatase_complex


id: GOCC:0005971
description: Ribonucleoside-diphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005971
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0005971_Ribonucleoside-diphosphate_reductase_complex


id: GOCC:0008076
description: Voltage-gated potassium channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0008076
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0008076_Voltage-gated_potassium_channel_complex


id: GOCC:0008287
description: Protein serine/threonine phosphatase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0008287
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0008287_Protein_serine/threonine_phosphatase_complex


id: GOCC:0009279
description: Cell outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009279
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0009279_Cell_outer_membrane


id: GOCC:0009288
description: Bacterial-type flagellum
memo: https://amigo.geneontology.org/amigo/term/GO:0009288
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0009288_Bacterial-type_flagellum


id: GOCC:0009316
description: 3-isopropylmalate dehydratase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009316
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0009316_3-isopropylmalate_dehydratase_complex


id: GOCC:0009317
description: acetyl-CoA carboxylase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009317
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0009317_acetyl-CoA_carboxylase_complex


id: GOCC:0009318
description: Exodeoxyribonuclease VII complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009318
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0009318_Exodeoxyribonuclease_VII_complex


id: GOCC:0009326
description: Formate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009326
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0009326_Formate_dehydrogenase_complex


id: GOCC:0009331
description: glycerol-3-phosphate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009331
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0009331_glycerol-3-phosphate_dehydrogenase_complex


id: GOCC:0009337
description: Sulfite reductase complex (NADPH)
memo: https://amigo.geneontology.org/amigo/term/GO:0009337
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0009337_Sulfite_reductase_complex_(NADPH)


id: GOCC:0009338
description: Exodeoxyribonuclease V complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009338
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0009338_Exodeoxyribonuclease_V_complex


id: GOCC:0009341
description: Beta-galactosidase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009341
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0009341_Beta-galactosidase_complex


id: GOCC:0009347
description: Aspartate carbamoyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009347
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0009347_Aspartate_carbamoyltransferase_complex


id: GOCC:0009360
description: DNA polymerase III complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009360
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0009360_DNA_polymerase_III_complex


id: GOCC:0009366
description: Enterobactin synthetase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009366
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0009366_Enterobactin_synthetase_complex


id: GOCC:0009368
description: Endopeptidase Clp complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009368
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0009368_Endopeptidase_Clp_complex


id: GOCC:0009375
description: Ferredoxin hydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009375
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0009375_Ferredoxin_hydrogenase_complex


id: GOCC:0009376
description: HslUV protease complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009376
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0009376_HslUV_protease_complex


id: GOCC:0009379
description: Holliday junction helicase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009379
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0009379_Holliday_junction_helicase_complex


id: GOCC:0009380
description: Excinuclease repair complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009380
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0009380_Excinuclease_repair_complex


id: GOCC:0009420
description: Bacterial-type flagellum filament
memo: https://amigo.geneontology.org/amigo/term/GO:0009420
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0009420_Bacterial-type_flagellum_filament


id: GOCC:0009421
description: Bacterial-type flagellum filament cap
memo: https://amigo.geneontology.org/amigo/term/GO:0009421
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0009421_Bacterial-type_flagellum_filament_cap


id: GOCC:0009424
description: Bacterial-type flagellum hook
memo: https://amigo.geneontology.org/amigo/term/GO:0009424
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0009424_Bacterial-type_flagellum_hook


id: GOCC:0009425
description: Bacterial-type flagellum basal body
memo: https://amigo.geneontology.org/amigo/term/GO:0009425
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0009425_Bacterial-type_flagellum_basal_body


id: GOCC:0009431
description: Bacterial-type flagellum basal body, MS ring
memo: https://amigo.geneontology.org/amigo/term/GO:0009431
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0009431_Bacterial-type_flagellum_basal_body,_MS_ring


id: GOCC:0009505
description: Plant-type cell wall
memo: https://amigo.geneontology.org/amigo/term/GO:0009505
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0009505_Plant-type_cell_wall


id: GOCC:0009528
description: Plastid inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009528
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0009528_Plastid_inner_membrane


id: GOCC:0009706
description: Chloroplast inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009706
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0009706_Chloroplast_inner_membrane


id: GOCC:0009897
description: External side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009897
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0009897_External_side_of_plasma_membrane


id: GOCC:0009898
description: Cytoplasmic side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009898
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0009898_Cytoplasmic_side_of_plasma_membrane


id: GOCC:0009941
description: Chloroplast envelope
memo: https://amigo.geneontology.org/amigo/term/GO:0009941
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0009941_Chloroplast_envelope


id: GOCC:0012505
description: Endomembrane system
memo: https://amigo.geneontology.org/amigo/term/GO:0012505
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0012505_Endomembrane_system


id: GOCC:0015627
description: Type II protein secretion system complex
memo: https://amigo.geneontology.org/amigo/term/GO:0015627
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0015627_Type_II_protein_secretion_system_complex


id: GOCC:0015630
description: Microtubule cytoskeleton
memo: https://amigo.geneontology.org/amigo/term/GO:0015630
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0015630_Microtubule_cytoskeleton


id: GOCC:0015934
description: Large ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0015934
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0015934_Large_ribosomal_subunit


id: GOCC:0015935
description: Small ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0015935
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0015935_Small_ribosomal_subunit


id: GOCC:0016021
description: Integral component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0016021
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0016021_Integral_component_of_membrane


id: GOCC:0016465
description: Chaperonin ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016465
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0016465_Chaperonin_ATPase_complex


id: GOCC:0016469
description: Proton-transporting two-sector ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016469
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0016469_Proton-transporting_two-sector_ATPase_complex


id: GOCC:0016471
description: Vacuolar proton-transporting V-type ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016471
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0016471_Vacuolar_proton-transporting_V-type_ATPase_complex


id: GOCC:0016610
description: Nitrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016610
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0016610_Nitrogenase_complex


id: GOCC:0016612
description: Molybdenum-iron nitrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016612
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0016612_Molybdenum-iron_nitrogenase_complex


id: GOCC:0017101
description: aminoacyl-tRNA synthetase multienzyme complex
memo: https://amigo.geneontology.org/amigo/term/GO:0017101
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0017101_aminoacyl-tRNA_synthetase_multienzyme_complex


id: GOCC:0017122
description: Protein N-acetylglucosaminyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0017122
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0017122_Protein_N-acetylglucosaminyltransferase_complex


id: GOCC:0018995
description: Host cellular component
memo: https://amigo.geneontology.org/amigo/term/GO:0018995
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0018995_Host_cellular_component


id: GOCC:0019008
description: Molybdopterin synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0019008
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0019008_Molybdopterin_synthase_complex


id: GOCC:0019866
description: Organelle inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019866
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0019866_Organelle_inner_membrane


id: GOCC:0019897
description: Extrinsic component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019897
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0019897_Extrinsic_component_of_plasma_membrane


id: GOCC:0019898
description: Extrinsic component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019898
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0019898_Extrinsic_component_of_membrane


id: GOCC:0022625
description: Cytosolic large ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0022625
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0022625_Cytosolic_large_ribosomal_subunit


id: GOCC:0022627
description: Cytosolic small ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0022627
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0022627_Cytosolic_small_ribosomal_subunit


id: GOCC:0030075
description: Bacterial thylakoid
memo: https://amigo.geneontology.org/amigo/term/GO:0030075
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0030075_Bacterial_thylakoid


id: GOCC:0030076
description: Light-harvesting complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030076
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0030076_Light-harvesting_complex


id: GOCC:0030077
description: Plasma membrane light-harvesting complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030077
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0030077_Plasma_membrane_light-harvesting_complex


id: GOCC:0030256
description: Type I protein secretion system complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030256
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0030256_Type_I_protein_secretion_system_complex


id: GOCC:0030257
description: Type III protein secretion system complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030257
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0030257_Type_III_protein_secretion_system_complex


id: GOCC:0030288
description: Outer membrane-bounded periplasmic space
memo: https://amigo.geneontology.org/amigo/term/GO:0030288
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0030288_Outer_membrane-bounded_periplasmic_space


id: GOCC:0030312
description: External encapsulating structure
memo: https://amigo.geneontology.org/amigo/term/GO:0030312
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0030312_External_encapsulating_structure


id: GOCC:0030677
description: Ribonuclease P complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030677
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0030677_Ribonuclease_P_complex


id: GOCC:0030694
description: Bacterial-type flagellum basal body, rod
memo: https://amigo.geneontology.org/amigo/term/GO:0030694
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0030694_Bacterial-type_flagellum_basal_body,_rod


id: GOCC:0030880
description: RNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030880
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0030880_RNA_polymerase_complex


id: GOCC:0030956
description: glutamyl-tRNA(Gln) amidotransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030956
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0030956_glutamyl-tRNA(Gln)_amidotransferase_complex


id: GOCC:0030964
description: NADH dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030964
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0030964_NADH_dehydrogenase_complex


id: GOCC:0031012
description: Extracellular matrix
memo: https://amigo.geneontology.org/amigo/term/GO:0031012
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0031012_Extracellular_matrix


id: GOCC:0031224
description: Intrinsic component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031224
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0031224_Intrinsic_component_of_membrane


id: GOCC:0031225
description: Anchored component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031225
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0031225_Anchored_component_of_membrane


id: GOCC:0031226
description: Intrinsic component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031226
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0031226_Intrinsic_component_of_plasma_membrane


id: GOCC:0031250
description: Anaerobic ribonucleoside-triphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031250
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0031250_Anaerobic_ribonucleoside-triphosphate_reductase_complex


id: GOCC:0031410
description: Cytoplasmic vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0031410
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0031410_Cytoplasmic_vesicle


id: GOCC:0031469
description: Polyhedral organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0031469
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0031469_Polyhedral_organelle


id: GOCC:0031515
description: tRNA (m1A) methyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031515
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0031515_tRNA_(m1A)_methyltransferase_complex


id: GOCC:0031597
description: Cytosolic proteasome complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031597
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0031597_Cytosolic_proteasome_complex


id: GOCC:0031969
description: Chloroplast membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031969
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0031969_Chloroplast_membrane


id: GOCC:0031974
description: Membrane-enclosed lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0031974
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0031974_Membrane-enclosed_lumen


id: GOCC:0031984
description: Organelle subcompartment
memo: https://amigo.geneontology.org/amigo/term/GO:0031984
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0031984_Organelle_subcompartment


id: GOCC:0032299
description: Ribonuclease H2 complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032299
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0032299_Ribonuclease_H2_complex


id: GOCC:0032300
description: Mismatch repair complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032300
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0032300_Mismatch_repair_complex


id: GOCC:0032991
description: Protein-containing complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032991
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0032991_Protein-containing_complex


id: GOCC:0032993
description: protein-DNA complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032993
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0032993_protein-DNA_complex


id: GOCC:0033176
description: Proton-transporting V-type ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0033176
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0033176_Proton-transporting_V-type_ATPase_complex


id: GOCC:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GOCC:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GOCC:0033179
description: Proton-transporting V-type ATPase, V0 domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033179
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0033179_Proton-transporting_V-type_ATPase,_V0_domain


id: GOCC:0033180
description: Proton-transporting V-type ATPase, V1 domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033180
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0033180_Proton-transporting_V-type_ATPase,_V1_domain


id: GOCC:0033202
description: DNA helicase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0033202
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0033202_DNA_helicase_complex


id: GOCC:0033588
description: Elongator holoenzyme complex
memo: https://amigo.geneontology.org/amigo/term/GO:0033588
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0033588_Elongator_holoenzyme_complex


id: GOCC:0034357
description: Photosynthetic membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0034357
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0034357_Photosynthetic_membrane


id: GOCC:0034702
description: Ion channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034702
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0034702_Ion_channel_complex


id: GOCC:0034703
description: Cation channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034703
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0034703_Cation_channel_complex


id: GOCC:0034705
description: Potassium channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034705
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0034705_Potassium_channel_complex


id: GOCC:0034708
description: Methyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034708
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0034708_Methyltransferase_complex


id: GOCC:0042175
description: Nuclear outer membrane-endoplasmic reticulum membrane network
memo: https://amigo.geneontology.org/amigo/term/GO:0042175
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0042175_Nuclear_outer_membrane-endoplasmic_reticulum_membrane_network


id: GOCC:0042575
description: DNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0042575
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0042575_DNA_polymerase_complex


id: GOCC:0042601
description: Endospore-forming forespore
memo: https://amigo.geneontology.org/amigo/term/GO:0042601
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0042601_Endospore-forming_forespore


id: GOCC:0042716
description: Plasma membrane-derived chromatophore
memo: https://amigo.geneontology.org/amigo/term/GO:0042716
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0042716_Plasma_membrane-derived_chromatophore


id: GOCC:0042717
description: Plasma membrane-derived chromatophore membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0042717
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0042717_Plasma_membrane-derived_chromatophore_membrane


id: GOCC:0042763
description: Intracellular immature spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042763
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0042763_Intracellular_immature_spore


id: GOCC:0043190
description: ATP-binding cassette (ABC) transporter complex
memo: https://amigo.geneontology.org/amigo/term/GO:0043190
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0043190_ATP-binding_cassette_(ABC)_transporter_complex


id: GOCC:0043227
description: Membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043227
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0043227_Membrane-bounded_organelle


id: GOCC:0043228
description: Non-membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043228
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0043228_Non-membrane-bounded_organelle


id: GOCC:0043229
description: Intracellular organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043229
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0043229_Intracellular_organelle


id: GOCC:0043230
description: Extracellular organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043230
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0043230_Extracellular_organelle


id: GOCC:0043231
description: Intracellular membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043231
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0043231_Intracellular_membrane-bounded_organelle


id: GOCC:0043232
description: Intracellular non-membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043232
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0043232_Intracellular_non-membrane-bounded_organelle


id: GOCC:0043527
description: tRNA methyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0043527
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0043527_tRNA_methyltransferase_complex


id: GOCC:0043684
description: Type IV secretion system complex
memo: https://amigo.geneontology.org/amigo/term/GO:0043684
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0043684_Type_IV_secretion_system_complex


id: GOCC:0044815
description: DNA packaging complex
memo: https://amigo.geneontology.org/amigo/term/GO:0044815
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0044815_DNA_packaging_complex


id: GOCC:0045111
description: Intermediate filament cytoskeleton
memo: https://amigo.geneontology.org/amigo/term/GO:0045111
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0045111_Intermediate_filament_cytoskeleton


id: GOCC:0045259
description: Proton-transporting ATP synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0045259
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0045259_Proton-transporting_ATP_synthase_complex


id: GOCC:0045261
description: Proton-transporting ATP synthase complex, catalytic core F(1)
memo: https://amigo.geneontology.org/amigo/term/GO:0045261
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0045261_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: GOCC:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GOCC:0045271
description: Respiratory chain complex I
memo: https://amigo.geneontology.org/amigo/term/GO:0045271
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0045271_Respiratory_chain_complex_I


id: GOCC:0045272
description: Plasma membrane respiratory chain complex I
memo: https://amigo.geneontology.org/amigo/term/GO:0045272
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0045272_Plasma_membrane_respiratory_chain_complex_I


id: GOCC:0045275
description: Respiratory chain complex III
memo: https://amigo.geneontology.org/amigo/term/GO:0045275
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0045275_Respiratory_chain_complex_III


id: GOCC:0046821
description: Extrachromosomal DNA
memo: https://amigo.geneontology.org/amigo/term/GO:0046821
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0046821_Extrachromosomal_DNA


id: GOCC:0048471
description: Perinuclear region of cytoplasm
memo: https://amigo.geneontology.org/amigo/term/GO:0048471
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0048471_Perinuclear_region_of_cytoplasm


id: GOCC:0048476
description: Holliday junction resolvase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0048476
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0048476_Holliday_junction_resolvase_complex


id: GOCC:0048500
description: Signal recognition particle
memo: https://amigo.geneontology.org/amigo/term/GO:0048500
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0048500_Signal_recognition_particle


id: GOCC:0055040
description: Periplasmic flagellum
memo: https://amigo.geneontology.org/amigo/term/GO:0055040
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0055040_Periplasmic_flagellum


id: GOCC:0055052
description: ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing
memo: https://amigo.geneontology.org/amigo/term/GO:0055052
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0055052_ATP-binding_cassette_(ABC)_transporter_complex,_substrate-binding_subunit-containing


id: GOCC:0060205
description: Cytoplasmic vesicle lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0060205
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0060205_Cytoplasmic_vesicle_lumen


id: GOCC:0061695
description: Transferase complex, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0061695
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0061695_Transferase_complex,_transferring_phosphorus-containing_groups


id: GOCC:0065010
description: Extracellular membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0065010
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0065010_Extracellular_membrane-bounded_organelle


id: GOCC:0070013
description: Intracellular organelle lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0070013
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0070013_Intracellular_organelle_lumen


id: GOCC:0070062
description: Extracellular exosome
memo: https://amigo.geneontology.org/amigo/term/GO:0070062
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0070062_Extracellular_exosome


id: GOCC:0070470
description: Plasma membrane respirasome
memo: https://amigo.geneontology.org/amigo/term/GO:0070470
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0070470_Plasma_membrane_respirasome


id: GOCC:0097708
description: Intracellular vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0097708
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0097708_Intracellular_vesicle


id: GOCC:0098533
description: ATPase dependent transmembrane transport complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098533
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0098533_ATPase_dependent_transmembrane_transport_complex


id: GOCC:0098561
description: Methyl accepting chemotaxis protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098561
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0098561_Methyl_accepting_chemotaxis_protein_complex


id: GOCC:0098562
description: Cytoplasmic side of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0098562
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0098562_Cytoplasmic_side_of_membrane


id: GOCC:0098588
description: Bounding membrane of organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0098588
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0098588_Bounding_membrane_of_organelle


id: GOCC:0098796
description: Membrane protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098796
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0098796_Membrane_protein_complex


id: GOCC:0098797
description: Plasma membrane protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098797
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0098797_Plasma_membrane_protein_complex


id: GOCC:0098803
description: Respiratory chain complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098803
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0098803_Respiratory_chain_complex


id: GOCC:0098827
description: Endoplasmic reticulum subcompartment
memo: https://amigo.geneontology.org/amigo/term/GO:0098827
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0098827_Endoplasmic_reticulum_subcompartment


id: GOCC:0098857
description: Membrane microdomain
memo: https://amigo.geneontology.org/amigo/term/GO:0098857
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0098857_Membrane_microdomain


id: GOCC:0099023
description: Vesicle tethering complex
memo: https://amigo.geneontology.org/amigo/term/GO:0099023
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0099023_Vesicle_tethering_complex


id: GOCC:0099080
description: Supramolecular complex
memo: https://amigo.geneontology.org/amigo/term/GO:0099080
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0099080_Supramolecular_complex


id: GOCC:0099081
description: Supramolecular polymer
memo: https://amigo.geneontology.org/amigo/term/GO:0099081
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0099081_Supramolecular_polymer


id: GOCC:0099512
description: Supramolecular fiber
memo: https://amigo.geneontology.org/amigo/term/GO:0099512
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0099512_Supramolecular_fiber


id: GOCC:0099513
description: Polymeric cytoskeletal fiber
memo: https://amigo.geneontology.org/amigo/term/GO:0099513
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0099513_Polymeric_cytoskeletal_fiber


id: GOCC:0110142
description: Ubiquinone biosynthesis complex
memo: https://amigo.geneontology.org/amigo/term/GO:0110142
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0110142_Ubiquinone_biosynthesis_complex


id: GOCC:0110165
description: Cellular anatomical entity
memo: https://amigo.geneontology.org/amigo/term/GO:0110165
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0110165_Cellular_anatomical_entity


id: GOCC:0120025
description: Plasma membrane bounded cell projection
memo: https://amigo.geneontology.org/amigo/term/GO:0120025
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:0120025_Plasma_membrane_bounded_cell_projection


id: GOCC:1902495
description: Transmembrane transporter complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902495
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:1902495_Transmembrane_transporter_complex


id: GOCC:1902503
description: Adenylyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902503
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:1902503_Adenylyltransferase_complex


id: GOCC:1902508
description: 2-iminoacetate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902508
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:1902508_2-iminoacetate_synthase_complex


id: GOCC:1902555
description: Endoribonuclease complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902555
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:1902555_Endoribonuclease_complex


id: GOCC:1902560
description: GMP reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902560
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:1902560_GMP_reductase_complex


id: GOCC:1903293
description: Phosphatase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1903293
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:1903293_Phosphatase_complex


id: GOCC:1903561
description: Extracellular vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:1903561
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:1903561_Extracellular_vesicle


id: GOCC:1903600
description: Glutaminase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1903600
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:1903600_Glutaminase_complex


id: GOCC:1905347
description: Endodeoxyribonuclease complex
memo: https://amigo.geneontology.org/amigo/term/GO:1905347
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:1905347_Endodeoxyribonuclease_complex


id: GOCC:1905348
description: Endonuclease complex
memo: https://amigo.geneontology.org/amigo/term/GO:1905348
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:1905348_Endonuclease_complex


id: GOCC:1905369
description: Endopeptidase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1905369
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:1905369_Endopeptidase_complex


id: GOCC:1990060
description: Maltose transport complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990060
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:1990060_Maltose_transport_complex


id: GOCC:1990065
description: Dxr protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990065
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:1990065_Dxr_protein_complex


id: GOCC:1990204
description: Oxidoreductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990204
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:1990204_Oxidoreductase_complex


id: GOCC:1990220
description: GroEL-GroES complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990220
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:1990220_GroEL-GroES_complex


id: GOCC:1990221
description: L-cysteine desulfurase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990221
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:1990221_L-cysteine_desulfurase_complex


id: GOCC:1990228
description: Sulfurtransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990228
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:1990228_Sulfurtransferase_complex


id: GOCC:1990229
description: Iron-sulfur cluster assembly complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990229
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:1990229_Iron-sulfur_cluster_assembly_complex


id: GOCC:1990234
description: Transferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990234
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:1990234_Transferase_complex


id: GOCC:1990351
description: Transporter complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990351
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:1990351_Transporter_complex


id: GOCC:1990904
description: Ribonucleoprotein complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990904
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_29343_STRINGid_GOCC:1990904_Ribonucleoprotein_complex


id: IPR000023
description: Phosphofructokinase domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000023
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000023_Phosphofructokinase_domain


id: IPR000032
description: Phosphocarrier protein HPr-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000032
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000032_Phosphocarrier_protein_HPr-like


id: IPR000045
description: Prepilin type IV endopeptidase, peptidase domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000045
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000045_Prepilin_type_IV_endopeptidase,_peptidase_domain


id: IPR000055
description: Type I restriction modification DNA specificity domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000055
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000055_Type_I_restriction_modification_DNA_specificity_domain


id: IPR000056
description: Ribulose-phosphate 3-epimerase-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000056
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000056_Ribulose-phosphate_3-epimerase-like


id: IPR000064
description: Endopeptidase, NLPC/P60 domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000064
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000064_Endopeptidase,_NLPC/P60_domain


id: IPR000067
description: Flagellar M-ring protein FliF
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000067
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000067_Flagellar_M-ring_protein_FliF


id: IPR000073
description: Alpha/beta hydrolase fold-1
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000073
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000073_Alpha/beta_hydrolase_fold-1


id: IPR000085
description: Bacterial DNA recombination protein RuvA
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000085
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000085_Bacterial_DNA_recombination_protein_RuvA


id: IPR000086
description: NUDIX hydrolase domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000086
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000086_NUDIX_hydrolase_domain


id: IPR000089
description: Biotin/lipoyl attachment
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000089
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000089_Biotin/lipoyl_attachment


id: IPR000090
description: Flagellar motor switch protein FliG
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000090
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000090_Flagellar_motor_switch_protein_FliG


id: IPR000093
description: DNA recombination protein RecR
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000093
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000093_DNA_recombination_protein_RecR


id: IPR000115
description: Phosphoribosylglycinamide synthetase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000115
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000115_Phosphoribosylglycinamide_synthetase


id: IPR000119
description: Histone-like DNA-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000119
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000119_Histone-like_DNA-binding_protein


id: IPR000121
description: PEP-utilising enzyme, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000121
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000121_PEP-utilising_enzyme,_C-terminal


id: IPR000158
description: Cell division protein FtsZ
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000158
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000158_Cell_division_protein_FtsZ


id: IPR000178
description: Translation initiation factor IF-2, bacterial-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000178
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000178_Translation_initiation_factor_IF-2,_bacterial-like


id: IPR000180
description: Membrane dipeptidase, active site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000180
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000180_Membrane_dipeptidase,_active_site


id: IPR000183
description: Ornithine/DAP/Arg decarboxylase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000183
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000183_Ornithine/DAP/Arg_decarboxylase


id: IPR000185
description: Protein translocase subunit SecA
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000185
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000185_Protein_translocase_subunit_SecA


id: IPR000192
description: Aminotransferase class V domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000192
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000192_Aminotransferase_class_V_domain


id: IPR000194
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000194
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000194_ATPase,_F1/V1/A1_complex,_alpha/beta_subunit,_nucleotide-binding_domain


id: IPR000206
description: Ribosomal protein L7/L12
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000206
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000206_Ribosomal_protein_L7/L12


id: IPR000212
description: DNA helicase, UvrD/REP type
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000212
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000212_DNA_helicase,_UvrD/REP_type


id: IPR000218
description: Ribosomal protein L14P
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000218
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000218_Ribosomal_protein_L14P


id: IPR000223
description: Peptidase S26A, signal peptidase I
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000223
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000223_Peptidase_S26A,_signal_peptidase_I


id: IPR000235
description: Ribosomal protein S5/S7
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000235
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000235_Ribosomal_protein_S5/S7


id: IPR000238
description: Ribosome-binding factor A
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000238
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000238_Ribosome-binding_factor_A


id: IPR000241
description: Ribosomal RNA large subunit methyltransferase K/L-like, FLD domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000241
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000241_Ribosomal_RNA_large_subunit_methyltransferase_K/L-like,_FLD_domain


id: IPR000253
description: Forkhead-associated (FHA) domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000253
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000253_Forkhead-associated_(FHA)_domain


id: IPR000266
description: Ribosomal protein S17/S11
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000266
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000266_Ribosomal_protein_S17/S11


id: IPR000277
description: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000277
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000277_Cys/Met_metabolism,_pyridoxal_phosphate-dependent_enzyme


id: IPR000281
description: Helix-turn-helix protein RpiR
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000281
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000281_Helix-turn-helix_protein_RpiR


id: IPR000283
description: NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000283
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000283_NADH:ubiquinone_oxidoreductase,_75kDa_subunit,_conserved_site


id: IPR000291
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000291
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000291_D-alanine--D-alanine_ligase/VANA/B/C,_conserved_site


id: IPR000297
description: Peptidyl-prolyl cis-trans isomerase, PpiC-type
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000297
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000297_Peptidyl-prolyl_cis-trans_isomerase,_PpiC-type


id: IPR000304
description: Pyrroline-5-carboxylate reductase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000304
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000304_Pyrroline-5-carboxylate_reductase


id: IPR000310
description: Orn/Lys/Arg decarboxylase, major domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000310
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000310_Orn/Lys/Arg_decarboxylase,_major_domain


id: IPR000312
description: Glycosyl transferase, family 3
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000312
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000312_Glycosyl_transferase,_family_3


id: IPR000318
description: Nitrogenase component 1, conserved site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000318
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000318_Nitrogenase_component_1,_conserved_site


id: IPR000322
description: Glycoside hydrolase family 31
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000322
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000322_Glycoside_hydrolase_family_31


id: IPR000352
description: Peptide chain release factor class I
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000352
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000352_Peptide_chain_release_factor_class_I


id: IPR000374
description: Phosphatidate cytidylyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000374
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000374_Phosphatidate_cytidylyltransferase


id: IPR000380
description: DNA topoisomerase, type IA
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000380
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000380_DNA_topoisomerase,_type_IA


id: IPR000385
description: MoaA/NifB/PqqE, iron-sulphur binding, conserved site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000385
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000385_MoaA/NifB/PqqE,_iron-sulphur_binding,_conserved_site


id: IPR000397
description: Heat shock protein Hsp33
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000397
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000397_Heat_shock_protein_Hsp33


id: IPR000399
description: TPP-binding enzyme, conserved site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000399
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000399_TPP-binding_enzyme,_conserved_site


id: IPR000417
description: Hydroxyethylthiazole kinase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000417
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000417_Hydroxyethylthiazole_kinase


id: IPR000424
description: Primosome PriB/single-strand DNA-binding
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000424
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000424_Primosome_PriB/single-strand_DNA-binding


id: IPR000432
description: DNA mismatch repair protein MutS, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000432
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000432_DNA_mismatch_repair_protein_MutS,_C-terminal


id: IPR000438
description: Acetyl-CoA carboxylase carboxyl transferase, beta subunit
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000438
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000438_Acetyl-CoA_carboxylase_carboxyl_transferase,_beta_subunit


id: IPR000445
description: Helix-hairpin-helix motif
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000445
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000445_Helix-hairpin-helix_motif


id: IPR000454
description: ATP synthase, F0 complex, subunit C
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000454
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000454_ATP_synthase,_F0_complex,_subunit_C


id: IPR000462
description: CDP-alcohol phosphatidyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000462
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000462_CDP-alcohol_phosphatidyltransferase


id: IPR000506
description: Ketol-acid reductoisomerase, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000506
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000506_Ketol-acid_reductoisomerase,_C-terminal


id: IPR000510
description: Nitrogenase/oxidoreductase, component 1
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000510
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000510_Nitrogenase/oxidoreductase,_component_1


id: IPR000514
description: Glycoside hydrolase, family 39
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000514
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000514_Glycoside_hydrolase,_family_39


id: IPR000515
description: ABC transporter type 1, transmembrane domain MetI-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000515
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000515_ABC_transporter_type_1,_transmembrane_domain_MetI-like


id: IPR000523
description: Magnesium chelatase ChlI-like, catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000523
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000523_Magnesium_chelatase_ChlI-like,_catalytic_domain


id: IPR000524
description: Transcription regulator HTH, GntR
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000524
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000524_Transcription_regulator_HTH,_GntR


id: IPR000534
description: Semialdehyde dehydrogenase, NAD-binding
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000534
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000534_Semialdehyde_dehydrogenase,_NAD-binding


id: IPR000556
description: Glycoside hydrolase, 48F
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000556
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000556_Glycoside_hydrolase,_48F


id: IPR000559
description: Formate-tetrahydrofolate ligase, FTHFS
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000559
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000559_Formate-tetrahydrofolate_ligase,_FTHFS


id: IPR000565
description: DNA topoisomerase, type IIA, subunit B
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000565
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000565_DNA_topoisomerase,_type_IIA,_subunit_B


id: IPR000573
description: Aconitase A/isopropylmalate dehydratase small subunit, swivel domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000573
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000573_Aconitase_A/isopropylmalate_dehydratase_small_subunit,_swivel_domain


id: IPR000577
description: Carbohydrate kinase, FGGY
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000577
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000577_Carbohydrate_kinase,_FGGY


id: IPR000581
description: Dihydroxy-acid/6-phosphogluconate dehydratase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000581
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000581_Dihydroxy-acid/6-phosphogluconate_dehydratase


id: IPR000587
description: Creatinase, N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000587
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000587_Creatinase,_N-terminal


id: IPR000594
description: THIF-type NAD/FAD binding fold
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000594
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000594_THIF-type_NAD/FAD_binding_fold


id: IPR000595
description: Cyclic nucleotide-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000595
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000595_Cyclic_nucleotide-binding_domain


id: IPR000623
description: Shikimate kinase/Threonine synthase-like 1
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000623
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000623_Shikimate_kinase/Threonine_synthase-like_1


id: IPR000631
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000631
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000631_ATP/ADP-dependent_(S)-NAD(P)H-hydrate_dehydratase


id: IPR000634
description: Serine/threonine dehydratase, pyridoxal-phosphate-binding site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000634
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000634_Serine/threonine_dehydratase,_pyridoxal-phosphate-binding_site


id: IPR000639
description: Epoxide hydrolase-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000639
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000639_Epoxide_hydrolase-like


id: IPR000640
description: Elongation factor EFG, domain V-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000640
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000640_Elongation_factor_EFG,_domain_V-like


id: IPR000652
description: Triosephosphate isomerase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000652
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000652_Triosephosphate_isomerase


id: IPR000653
description: DegT/DnrJ/EryC1/StrS aminotransferase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000653
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000653_DegT/DnrJ/EryC1/StrS_aminotransferase


id: IPR000669
description: Mannitol dehydrogenase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000669
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000669_Mannitol_dehydrogenase


id: IPR000672
description: Tetrahydrofolate dehydrogenase/cyclohydrolase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000672
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000672_Tetrahydrofolate_dehydrogenase/cyclohydrolase


id: IPR000673
description: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000673
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000673_Signal_transduction_response_regulator,_chemotaxis,_protein-glutamate_methylesterase


id: IPR000683
description: Gfo/Idh/MocA-like oxidoreductase, N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000683
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000683_Gfo/Idh/MocA-like_oxidoreductase,_N-terminal


id: IPR000688
description: Hydrogenase maturation factor HypA/HybF
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000688
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000688_Hydrogenase_maturation_factor_HypA/HybF


id: IPR000713
description: Mur ligase, N-terminal catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000713
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000713_Mur_ligase,_N-terminal_catalytic_domain


id: IPR000715
description: Glycosyl transferase, family 4
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000715
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000715_Glycosyl_transferase,_family_4


id: IPR000722
description: RNA polymerase, alpha subunit
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000722
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000722_RNA_polymerase,_alpha_subunit


id: IPR000727
description: Target SNARE coiled-coil homology domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000727
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000727_Target_SNARE_coiled-coil_homology_domain


id: IPR000740
description: GrpE nucleotide exchange factor
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000740
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000740_GrpE_nucleotide_exchange_factor


id: IPR000748
description: Pseudouridine synthase, RsuA/RluB/E/F
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000748
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000748_Pseudouridine_synthase,_RsuA/RluB/E/F


id: IPR000749
description: ATP:guanido phosphotransferase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000749
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000749_ATP:guanido_phosphotransferase


id: IPR000771
description: Fructose-bisphosphate aldolase, class-II
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000771
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000771_Fructose-bisphosphate_aldolase,_class-II


id: IPR000780
description: MCP methyltransferase, CheR-type
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000780
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000780_MCP_methyltransferase,_CheR-type


id: IPR000788
description: Ribonucleotide reductase large subunit, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000788
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000788_Ribonucleotide_reductase_large_subunit,_C-terminal


id: IPR000792
description: Transcription regulator LuxR, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000792
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000792_Transcription_regulator_LuxR,_C-terminal


id: IPR000794
description: Beta-ketoacyl synthase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000794
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000794_Beta-ketoacyl_synthase


id: IPR000795
description: Translational (tr)-type GTP-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000795
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000795_Translational_(tr)-type_GTP-binding_domain


id: IPR000807
description: Imidazoleglycerol-phosphate dehydratase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000807
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000807_Imidazoleglycerol-phosphate_dehydratase


id: IPR000811
description: Glycosyl transferase, family 35
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000811
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000811_Glycosyl_transferase,_family_35


id: IPR000834
description: Peptidase M14, carboxypeptidase A
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000834
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000834_Peptidase_M14,_carboxypeptidase_A


id: IPR000836
description: Phosphoribosyltransferase domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000836
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000836_Phosphoribosyltransferase_domain


id: IPR000838
description: RNA polymerase sigma factor 70, ECF, conserved site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000838
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000838_RNA_polymerase_sigma_factor_70,_ECF,_conserved_site


id: IPR000845
description: Nucleoside phosphorylase domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000845
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000845_Nucleoside_phosphorylase_domain


id: IPR000846
description: Dihydrodipicolinate reductase, N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000846
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000846_Dihydrodipicolinate_reductase,_N-terminal


id: IPR000850
description: Adenylate kinase/UMP-CMP kinase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000850
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000850_Adenylate_kinase/UMP-CMP_kinase


id: IPR000866
description: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000866
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000866_Alkyl_hydroperoxide_reductase_subunit_C/_Thiol_specific_antioxidant


id: IPR000873
description: AMP-dependent synthetase/ligase domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000873
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000873_AMP-dependent_synthetase/ligase_domain


id: IPR000878
description: Tetrapyrrole methylase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000878
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000878_Tetrapyrrole_methylase


id: IPR000888
description: dTDP-4-dehydrorhamnose 3,5-epimerase-related
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000888
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000888_dTDP-4-dehydrorhamnose_3,5-epimerase-related


id: IPR000890
description: Aliphatic acid kinase, short-chain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000890
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000890_Aliphatic_acid_kinase,_short-chain


id: IPR000891
description: Pyruvate carboxyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000891
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000891_Pyruvate_carboxyltransferase


id: IPR000897
description: Signal recognition particle, SRP54 subunit, GTPase domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000897
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000897_Signal_recognition_particle,_SRP54_subunit,_GTPase_domain


id: IPR000911
description: Ribosomal protein L11/L12
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000911
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000911_Ribosomal_protein_L11/L12


id: IPR000914
description: Solute-binding protein family 5 domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000914
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000914_Solute-binding_protein_family_5_domain


id: IPR000924
description: Glutamyl/glutaminyl-tRNA synthetase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000924
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000924_Glutamyl/glutaminyl-tRNA_synthetase


id: IPR000943
description: RNA polymerase sigma-70
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000943
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000943_RNA_polymerase_sigma-70


id: IPR000944
description: Transcription regulator Rrf2
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000944
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000944_Transcription_regulator_Rrf2


id: IPR000979
description: Phosphodiesterase MJ0936/Vps29
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000979
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000979_Phosphodiesterase_MJ0936/Vps29


id: IPR000983
description: Bacterial general secretion pathway protein G-type pilin
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000983
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000983_Bacterial_general_secretion_pathway_protein_G-type_pilin


id: IPR000999
description: Ribonuclease III domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000999
name:
  Protein Domains and Features (InterPro).STRING_v12.0_29343_STRINGid_IPR000999_Ribonuclease_III_domain


