# geneInfo

ensembl_gene_id: PBPRA0002
symbol: S4013
gene_biotype: protein_coding
description:
  Putative thiophene and furan oxidation protein ThdF; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: PBPRA0003
symbol: VV0003
gene_biotype: protein_coding
description:
  Putative inner membrane protein, 60 kDa; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: PBPRA0004
symbol: RNPA
gene_biotype: protein_coding
description:
  Putative RNase P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: PBPRA0005
symbol: YCKI
gene_biotype: protein_coding
description:
  Putative amino acid ABC transporter, ATP-binding protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0006
symbol: CAC0878
gene_biotype: protein_coding
description:
  Putative amino acid ABC transporter, permease protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0007
symbol: FLIY
gene_biotype: protein_coding
description:
  Putative amino acid ABC transporter, periplasmic amino acid-binding portion; Predicted by orpheus program; predicted by glimmer program; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: PBPRA0008
symbol: VV0011
gene_biotype: protein_coding
description:
  Putative DnaA chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids.


ensembl_gene_id: PBPRA0009
symbol: PLU0002
gene_biotype: protein_coding
description:
  Putative DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initia [...]


ensembl_gene_id: PBPRA0010
symbol: S4007
gene_biotype: protein_coding
description:
  Putative RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: PBPRA0011
symbol: PLU0004
gene_biotype: protein_coding
description:
  Putative DNA gyrase, subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: PBPRA0012
symbol: PP4344
gene_biotype: protein_coding
description:
  Putative flagellar biosynthesis protein; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: PBPRA0013
symbol: VP2236
gene_biotype: protein_coding
description:
  Hypothetical FlhB flagellar biosynthetic protein; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: PBPRA0014
symbol: BB2576
gene_biotype: protein_coding
description:
  Hypothetical flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: PBPRA0015
symbol: VP2238
gene_biotype: protein_coding
description:
  Putative flagellar biosynthetic protein; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: PBPRA0016
symbol: SO3218
gene_biotype: protein_coding
description:
  Putative flagellar assembly protein; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: PBPRA0017
symbol: Y3468
gene_biotype: protein_coding
description:
  Putative flagellar motor switch protein; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.


ensembl_gene_id: PBPRA0020
symbol: PSPTO195
gene_biotype: protein_coding
description:
  Hypothetical two-component response regulator; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0021
symbol: Y3465
gene_biotype: protein_coding
description:
  Hypothetical FliE-like hook basal body protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0022
symbol: CV2999
gene_biotype: protein_coding
description:
  Hypothetical FliF Flagellar M-ring transmembrane protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: PBPRA0023
symbol: YPO0715
gene_biotype: protein_coding
description:
  Hypothetical puative flagellar motor switch protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0024
symbol: CV2997
gene_biotype: protein_coding
description:
  Hypothetical flagellar assembly protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0025
symbol: SO3225
gene_biotype: protein_coding
description:
  Putative FliI, flagellum-specific ATP synthase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0030
symbol: SO3250
gene_biotype: protein_coding
description:
  Hypothetical FlgB putative flagellar basal-body rod protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: PBPRA0031
symbol: PA1078
gene_biotype: protein_coding
description:
  Hypothetical FlgC flagellar basal-body rod protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: PBPRA0032
symbol: EBIG853
gene_biotype: protein_coding
description:
  Hypothetical flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.


ensembl_gene_id: PBPRA0033
symbol: PA1080
gene_biotype: protein_coding
description:
  Hypothetical flagellar hook protein FlgE; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0034
symbol: RS00747
gene_biotype: protein_coding
description:
  Hypothetical FlgF flagellar basal-body rod protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: PBPRA0035
symbol: CV1706
gene_biotype: protein_coding
description:
  Putative FlgG flagellar basal-body rod protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: PBPRA0036
symbol: CV1708
gene_biotype: protein_coding
description:
  Hypothetical flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: PBPRA0038
symbol: VPA0273
gene_biotype: protein_coding
description:
  Hypothetical flagellar hook-associated protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0039
symbol: VPA0274
gene_biotype: protein_coding
description:
  Hypothetical FlgL flagellar hook-associated protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0041
symbol: PBPRA0041
gene_biotype: protein_coding
description:
  Hypothetical flagellin type B; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: PBPRA0042
symbol: PBPRA0042
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: PBPRA0045
symbol: PBPRA0045
gene_biotype: protein_coding
description:
  Hypothetical flagellar hook control length protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0046
symbol: PBPRA0046
gene_biotype: protein_coding
description:
  Hypothetical protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: PBPRA0047
symbol: PSPTO197
gene_biotype: protein_coding
description:
  Hypothetical flagellar-specific transcription initiation factor sigma, LafS; Predicted by orpheus program; predicted by glimmer program; Belongs to the sigma-70 factor family.


ensembl_gene_id: PBPRA0048
symbol: PA4954
gene_biotype: protein_coding
description:
  Hypothetical MotA flagellar motor transmembrane protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0050
symbol: Z2979
gene_biotype: protein_coding
description:
  Hypothetical stbA Plasmid stable inheritance protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0053
symbol: SO2277
gene_biotype: protein_coding
description:
  Putative 16kDa heat shock protein A; Predicted by orpheus program; predicted by glimmer program; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: PBPRA0054
symbol: Z4997
gene_biotype: protein_coding
description:
  Putative valine-pyruvate aminotransferase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0055
symbol: GLYS
gene_biotype: protein_coding
description:
  Putative glycyl-tRNA synthetase, beta chain; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0056
symbol: GLYQ
gene_biotype: protein_coding
description:
  Putative glycyl-tRNA synthetase, alpha chain; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0058
symbol: RSC2100
gene_biotype: protein_coding
description:
  Conserved hypothetical membrane protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0059
symbol: VV10987
gene_biotype: protein_coding
description:
  Hypothetical NADH dehydrogenase subunit II-related protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0060
symbol: SIRA
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Sulfur carrier protein which probably makes part of a sulfur- relay system; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: PBPRA0061
symbol: VP0027
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, LysR family; Predicted by orpheus program; predicted by glimmer program; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: PBPRA0062
symbol: STM3376
gene_biotype: protein_coding
description:
  Putative zinc-binding alcohol dehydrogenase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0063
symbol: FADA
gene_biotype: protein_coding
description:
  Putative Acetyl-CoA acetyltransferase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed.


ensembl_gene_id: PBPRA0064
symbol: C4793
gene_biotype: protein_coding
description:
  Putative fatty oxidation complex, alpha subunit; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.


ensembl_gene_id: PBPRA0066
symbol: STY3574
gene_biotype: protein_coding
description:
  Putative potassium uptake protein TrkH; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.


ensembl_gene_id: PBPRA0078
symbol: SO2276
gene_biotype: protein_coding
description:
  Transposase and inactivated derivative [Vibrio vulnificus YJ016]; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0080
symbol: CBU1270
gene_biotype: protein_coding
description:
  Transposase and inactivated derivatives [Azotobacter vinelandii]; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0084
symbol: PLU4669
gene_biotype: protein_coding
description:
  Transcriptional activator IlvY [Vibrio cholerae O1 biovar eltor str. N16961]; Predicted by orpheus program; predicted by glimmer program; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: PBPRA0085
symbol: S3910
gene_biotype: protein_coding
description:
  Putative ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: PBPRA0087
symbol: PM1132
gene_biotype: protein_coding
description:
  Putative multidrug resistance protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: PBPRA0088
symbol: CBU1094
gene_biotype: protein_coding
description:
  Hypothetical membrane-fusion protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: PBPRA0089
symbol: CBU1094-2
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: PBPRA0090
symbol: SO4326
gene_biotype: protein_coding
description:
  Hypothetical transcriptional regulator, TetR family; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0091
symbol: S3908
gene_biotype: protein_coding
description:
  Putative ATP-dependent DNA helicase Rep; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction.


ensembl_gene_id: PBPRA0098
symbol: AGAD
gene_biotype: protein_coding
description:
  Putative peptide ABC transporter, ATP-binding protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the ABC transporter superfamily.


ensembl_gene_id: PBPRA0099
symbol: BP3802
gene_biotype: protein_coding
description:
  Putative peptide ABC transporter,periplasmic peptide-binding protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0101
symbol: R02595
gene_biotype: protein_coding
description:
  Putative peptide ABC transporter, permease protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0103
symbol: VV3208
gene_biotype: protein_coding
description:
  Putative CrcB protein (integral membrane protein possibly involved in chromosome condensation); Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: PBPRA0106
symbol: THIC
gene_biotype: protein_coding
description:
  Putative thiamin biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.


ensembl_gene_id: PBPRA0107
symbol: VC0062
gene_biotype: protein_coding
description:
  Hypothetical thiamin-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: PBPRA0108
symbol: BP0610
gene_biotype: protein_coding
description:
  Putative molybdopterin biosynthesis MoeB protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0109
symbol: THIG
gene_biotype: protein_coding
description:
  Putative thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: PBPRA0116
symbol: UBIE
gene_biotype: protein_coding
description:
  Putative ubiquinone/menaquinone biosynthesis methlytransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).


ensembl_gene_id: PBPRA0118
symbol: UBIB
gene_biotype: protein_coding
description:
  Putative ubiquinone biosynthesis; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis.


ensembl_gene_id: PBPRA0119
symbol: SO4202
gene_biotype: protein_coding
description:
  Putative TatA protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: PBPRA0120
symbol: HD0715
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.


ensembl_gene_id: PBPRA0121
symbol: YPO3776
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: PBPRA0123
symbol: HEMB
gene_biotype: protein_coding
description:
  Putative delta-aminolevulinic acid dehydratase; Predicted by orpheus program; predicted by glimmer program; Belongs to the ALAD family.


ensembl_gene_id: PBPRA0132
symbol: VV2296
gene_biotype: protein_coding
description:
  Putative aldehyde dehydrogenase; Predicted by orpheus program; predicted by glimmer program; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: PBPRA0143
symbol: YPAI
gene_biotype: protein_coding
description:
  Putative oxidoreductase, short-chain dehydrogenase/reductase family; Predicted by orpheus program; predicted by glimmer program; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: PBPRA0152
symbol: T3950
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle; Belongs to the methyltransferase superfamily. RsmD family.


ensembl_gene_id: PBPRA0153
symbol: T3951
gene_biotype: protein_coding
description:
  Putative cell division protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.


ensembl_gene_id: PBPRA0154
symbol: Y0418
gene_biotype: protein_coding
description:
  Hypothetical cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: PBPRA0155
symbol: S4284
gene_biotype: protein_coding
description:
  Putative RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.


ensembl_gene_id: PBPRA0156
symbol: GLPE
gene_biotype: protein_coding
description:
  Putative thiosulfate sulfurtransferase glpE; Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide.


ensembl_gene_id: PBPRA0158
symbol: STM2283
gene_biotype: protein_coding
description:
  Putative glycerol-3-phosphate transporter; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0159
symbol: STM3523
gene_biotype: protein_coding
description:
  Putative glycerol-3-phosphate repressor protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0160
symbol: GLPD
gene_biotype: protein_coding
description:
  Putative aerobic glycerol-3-phosphate dehydrogenase; Predicted by orpheus program; predicted by glimmer program; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: PBPRA0161
symbol: SO0132
gene_biotype: protein_coding
description:
  Putative flagellar protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: PBPRA0162
symbol: UBIC
gene_biotype: protein_coding
description:
  Hypothetical chorismate-pyruvate lyase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family.


ensembl_gene_id: PBPRA0163
symbol: PLU4377
gene_biotype: protein_coding
description:
  Putative 4-hydroxybenzoate octaprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.


ensembl_gene_id: PBPRA0164
symbol: S3567
gene_biotype: protein_coding
description:
  Putative glycerol-3-phosphate acyltransferase; Predicted by orpheus program; predicted by glimmer program; Belongs to the GPAT/DAPAT family.


ensembl_gene_id: PBPRA0165
symbol: lexA
gene_biotype: protein_coding
description:
  Putative LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: PBPRA0166
symbol: VP2944
gene_biotype: protein_coding
description:
  Hypothetical O-Methyltransferase-relateprotein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0167
symbol: CV0599
gene_biotype: protein_coding
description:
  Putative cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).


ensembl_gene_id: PBPRA0168
symbol: BPP4242
gene_biotype: protein_coding
description:
  Putative cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.


ensembl_gene_id: PBPRA0169
symbol: COXG
gene_biotype: protein_coding
description:
  Hypothetical cytochrome c oxidase assembly transmembrane protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0170
symbol: RSC0367
gene_biotype: protein_coding
description:
  Putative cytochrome c oxidase subunit III; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0173
symbol: RSC0371
gene_biotype: protein_coding
description:
  Hypothetical cytochrome c oxidase assembly protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0174
symbol: XAC3879
gene_biotype: protein_coding
description:
  Hypothetical protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.


ensembl_gene_id: PBPRA0175
symbol: DINF
gene_biotype: protein_coding
description:
  Putative DNA-damage-inducible protein F; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0177
symbol: PM1557
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.


ensembl_gene_id: PBPRA0179
symbol: T3997
gene_biotype: protein_coding
description:
  Putative bioH protein; The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters.


ensembl_gene_id: PBPRA0183
symbol: SF3425
gene_biotype: protein_coding
description:
  Putative transcription elongation factor GreB; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length.


ensembl_gene_id: PBPRA0184
symbol: Y3916
gene_biotype: protein_coding
description:
  Putative transcriptional regulator OmpR; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0185
symbol: ECS4246
gene_biotype: protein_coding
description:
  Putative sensor outer membrane protein EnvZ; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0187
symbol: S4077
gene_biotype: protein_coding
description:
  Putative ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: PBPRA0188
symbol: Y0104
gene_biotype: protein_coding
description:
  Putative tRNA methyltransferase; Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: PBPRA0189
symbol: C4475
gene_biotype: protein_coding
description:
  Putative guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: PBPRA0190
symbol: rpoZ
gene_biotype: protein_coding
description:
  Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: PBPRA0198
symbol: S4086
gene_biotype: protein_coding
description:
  Putative ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: PBPRA0199
symbol: S4087
gene_biotype: protein_coding
description:
  Putative orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: PBPRA0200
symbol: Z5065
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, TetR family; Required for nucleoid occlusion (NO) phenomenon, which prevents Z-ring formation and cell division over the nucleoid. Acts as a DNA-associated cell division inhibitor that binds simultaneously chromosomal DNA and FtsZ, and disrupts the assembly of FtsZ polymers. SlmA-DNA-binding sequences (SBS) are dispersed on non-Ter regions of the chromosome, preventing FtsZ polymerization at these regions.


ensembl_gene_id: PBPRA0201
symbol: STM3730
gene_biotype: protein_coding
description:
  Putative DNA/pantothenate metabolism flavoprotein; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: PBPRA0202
symbol: CV3079
gene_biotype: protein_coding
description:
  Putative DNA repair protein RadC; Predicted by orpheus program; predicted by glimmer program; Belongs to the UPF0758 family.


ensembl_gene_id: PBPRA0203
symbol: PLU4864
gene_biotype: protein_coding
description:
  Putative ribosomal protein L28; Predicted by orpheus program; predicted by glimmer program; Belongs to the bacterial ribosomal protein bL28 family.


ensembl_gene_id: PBPRA0204
symbol: SO4246
gene_biotype: protein_coding
description:
  Putative ribosomal protein L33; Predicted by orpheus program; predicted by glimmer program; Belongs to the bacterial ribosomal protein bL33 family.


ensembl_gene_id: PBPRA0206
symbol: mutM
gene_biotype: protein_coding
description:
  Putative formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: PBPRA0208
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: PBPRA0209
symbol: XCC0992
gene_biotype: protein_coding
description:
  Putative lipopolysaccharide biosynthesis protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0210
symbol: WAVC
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family.


ensembl_gene_id: PBPRA0211
symbol: PP4928
gene_biotype: protein_coding
description:
  Hypothetical KDO transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: PBPRA0213
symbol: RS01397
gene_biotype: protein_coding
description:
  Putative lipopolysaccharide biosynthesis glycosyltransferase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0216
symbol: PBPRA0216
gene_biotype: protein_coding
description:
  Putative capsular polysaccharide biosynthesis protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0217
symbol: HH0323
gene_biotype: protein_coding
description:
  Putative Lex2B protein (lipooligosaccharide 5G8 epitope biosynthesis-associated protein); Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0219
symbol: ECS2565
gene_biotype: protein_coding
description:
  Putative lipid A biosynthesis (kdo)2-(lauroyl)-lipid IVA acyltransferase; Catalyzes the transfer of myristate from myristoyl-acyl carrier protein (ACP) to Kdo(2)-(lauroyl)-lipid IV(A) to form Kdo(2)- lipid A.


ensembl_gene_id: PBPRA0220
symbol: S4109
gene_biotype: protein_coding
description:
  Putative ADP glyceromanno-heptose 6-epimerase GmhD; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily.


ensembl_gene_id: PBPRA0223
symbol: VP2834
gene_biotype: protein_coding
description:
  Putative NlpD-related protein family M37 unassigned peptidase (NlpD protein); Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0224
symbol: YIBO
gene_biotype: protein_coding
description:
  Putative phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: PBPRA0226
symbol: SO0052
gene_biotype: protein_coding
description:
  Putative protein-transport protein SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.


ensembl_gene_id: PBPRA0227
symbol: PLU4838
gene_biotype: protein_coding
description:
  Putative glycerol-3-phosphate dehydrogenase; Predicted by orpheus program; predicted by glimmer program; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: PBPRA0229
symbol: SF3645
gene_biotype: protein_coding
description:
  Putative rRNA methylase, SpoU family; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.


ensembl_gene_id: PBPRA0231
symbol: PLU4794
gene_biotype: protein_coding
description:
  Hypothetical transcriptional regulator CpxR; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0232
symbol: Y0067
gene_biotype: protein_coding
description:
  Putative transcriptional regulator CpxR; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0234
symbol: PFKA
gene_biotype: protein_coding
description:
  Putative 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: PBPRA0235
symbol: tpiA
gene_biotype: protein_coding
description:
  Putative triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: PBPRA0236
symbol: VV11345
gene_biotype: protein_coding
description:
  Putative 5-carboxymethyl-2-hydroxymuconate delta isomerase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0246
symbol: PD0496
gene_biotype: protein_coding
description:
  Hypothetical toxin secretion, membrane fusionprotein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0248
symbol: Y0047
gene_biotype: protein_coding
description:
  Putative ATP:glycerol 3-phosphotransferase (Glycerokinase)(GK); Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.


ensembl_gene_id: PBPRA0249
symbol: GLPF
gene_biotype: protein_coding
description:
  Putative glycerol uptake facilitator protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the MIP/aquaporin (TC 1.A.8) family.


ensembl_gene_id: PBPRA0250
symbol: STY3782
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Non-essential, abundant cell division factor that is required for proper Z-ring formation. It is recruited early to the divisome by direct interaction with FtsZ, stimulating Z-ring assembly and thereby promoting cell division earlier in the cell cycle. Its recruitment to the Z-ring requires functional FtsA or ZipA.


ensembl_gene_id: PBPRA0251
symbol: MENG
gene_biotype: protein_coding
description:
  Putative S-adenosylmethionine:2-demethylmenaquinone methyltransferase; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome. Modulates RNA-binding and helicase activities of the degradosome.


ensembl_gene_id: PBPRA0252
symbol: S3739
gene_biotype: protein_coding
description:
  Hypothetical 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.


ensembl_gene_id: PBPRA0253
symbol: HSLU
gene_biotype: protein_coding
description:
  Putative ATP-dependent protease HslVU, ATPase subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: PBPRA0254
symbol: HSLV
gene_biotype: protein_coding
description:
  Putative protease HslVU, subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: PBPRA0256
symbol: PLU4760
gene_biotype: protein_coding
description:
  Putative transcriptional repressor, LacI family; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0257
symbol: PLU4759
gene_biotype: protein_coding
description:
  Putative primosomal protein N`; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: PBPRA0260
symbol: PBPRA0260
gene_biotype: protein_coding
description:
  Putative met repressor; This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis.


ensembl_gene_id: PBPRA0262
symbol: STM4101
gene_biotype: protein_coding
description:
  Putative aspartokinase II/homoserine dehydrogenase, methionine-sensitive; Predicted by orpheus program; predicted by glimmer program; In the C-terminal section; belongs to the homoserine dehydrogenase family.


ensembl_gene_id: PBPRA0263
symbol: T3511
gene_biotype: protein_coding
description:
  Putative 5,10-methylenetetrahydrofolate reductase; Predicted by orpheus program; predicted by glimmer program; Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: PBPRA0265
symbol: SF4033
gene_biotype: protein_coding
description:
  Putative phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.


ensembl_gene_id: PBPRA0266
symbol: argC
gene_biotype: protein_coding
description:
  Putative N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: PBPRA0267
symbol: argB
gene_biotype: protein_coding
description:
  Putative acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: PBPRA0268
symbol: argG
gene_biotype: protein_coding
description:
  Putative argininosuccinate synthase; Predicted by orpheus program; predicted by glimmer program; Belongs to the argininosuccinate synthase family. Type 1 subfamily.


ensembl_gene_id: PBPRA0269
symbol: argH
gene_biotype: protein_coding
description:
  Putative argininosuccinase and n-acetylglutamate synthase; Predicted by orpheus program; predicted by glimmer program; In the N-terminal section; belongs to the lyase 1 family. Argininosuccinate lyase subfamily.


ensembl_gene_id: PBPRA0271
symbol: NMA1142
gene_biotype: protein_coding
description:
  Putative pyridine nucleotide-disulfide oxidoreductase, class I; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0272
symbol: NMB0946
gene_biotype: protein_coding
description:
  Putative peroxiredoxin/glutaredoxin family protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0273
symbol: OXYR
gene_biotype: protein_coding
description:
  Putative Hydrogen peroxide-inducible genes activator; Predicted by orpheus program; predicted by glimmer program; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: PBPRA0275
symbol: VC2634
gene_biotype: protein_coding
description:
  Hypothetical fimbrial assembly protein PilM; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0276
symbol: XCC3231
gene_biotype: protein_coding
description:
  Hypothetical fimbrial assembly protein PilN; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0277
symbol: VV11379
gene_biotype: protein_coding
description:
  Hypothetical fimbrial assembly protein PilO; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0278
symbol: EBIG1843
gene_biotype: protein_coding
description:
  Hypothetical fimbrial assembly protein PilP; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0280
symbol: aroK
gene_biotype: protein_coding
description:
  Putative shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: PBPRA0281
symbol: aroB
gene_biotype: protein_coding
description:
  Putative 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.


ensembl_gene_id: PBPRA0284
symbol: STM3483
gene_biotype: protein_coding
description:
  Putative ribulose-phosphate 3-epimerase; Predicted by orpheus program; predicted by glimmer program; Belongs to the ribulose-phosphate 3-epimerase family.


ensembl_gene_id: PBPRA0285
symbol: PSPTO056
gene_biotype: protein_coding
description:
  Putative phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.


ensembl_gene_id: PBPRA0286
symbol: trpS
gene_biotype: protein_coding
description:
  Putative tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: PBPRA0288
symbol: PLU0393
gene_biotype: protein_coding
description:
  Putative para-aminobenzoate synthase glutamine amidotransferase, component II; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0289
symbol: argD
gene_biotype: protein_coding
description:
  Putative acetylornithine aminotransferase; Predicted by orpheus program; predicted by glimmer program; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: PBPRA0290
symbol: SF1479
gene_biotype: protein_coding
description:
  Putative arginine/ornithine succinyltransferase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0291
symbol: ASTD
gene_biotype: protein_coding
description:
  Putative succinylglutamate 5-semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.


ensembl_gene_id: PBPRA0296
symbol: HD0737
gene_biotype: protein_coding
description:
  Hypothetical protein yheU; Predicted by orpheus program; predicted by glimmer program; Belongs to the UPF0270 family.


ensembl_gene_id: PBPRA0301
symbol: STM3459
gene_biotype: protein_coding
description:
  Putative ABC transporter, ATP-binding protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0302
symbol: RSC3097
gene_biotype: protein_coding
description:
  Putative NAD(P)H oxidoreductase; Regulatory subunit of a potassium efflux system that confers protection against electrophiles. Required for full activity of KefB.


ensembl_gene_id: PBPRA0303
symbol: VV3043
gene_biotype: protein_coding
description:
  Putative glutathione-regulated potassium-effluxsystem protein KefB; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport.


ensembl_gene_id: PBPRA0305
symbol: PM1567
gene_biotype: protein_coding
description:
  Putative peptidyl-prolyl cis-trans isomerase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0306
symbol: SLYX
gene_biotype: protein_coding
description:
  Putative slyX protein (slyX); Predicted by orpheus program; predicted by glimmer program; Belongs to the SlyX family.


ensembl_gene_id: PBPRA0308
symbol: STM3453
gene_biotype: protein_coding
description:
  Putative FKBP-type peptidyl-prolyl cis-trans isomerase 1; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0310
symbol: SF3363
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Could be part of a sulfur-relay system; Belongs to the DsrE/TusD family.


ensembl_gene_id: PBPRA0311
symbol: SF3362
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the DsrF/TusC family.


ensembl_gene_id: PBPRA0314
symbol: SO0227
gene_biotype: protein_coding
description:
  Putative ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: PBPRA0315
symbol: PLU0431
gene_biotype: protein_coding
description:
  Putative elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: PBPRA0316
symbol: TUFB
gene_biotype: protein_coding
description:
  Putative translation elongation factor TU (EF-Tu-B); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: PBPRA0317
symbol: YHEA
gene_biotype: protein_coding
description:
  Putative bacterioferritin-associated ferredoxin; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0318
symbol: PA3531
gene_biotype: protein_coding
description:
  Putative bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.


ensembl_gene_id: PBPRA0319
symbol: rpsJ
gene_biotype: protein_coding
description:
  Putative ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: PBPRA0320
symbol: rplC
gene_biotype: protein_coding
description:
  Putative ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.


ensembl_gene_id: PBPRA0321
symbol: S4411
gene_biotype: protein_coding
description:
  Putative ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.


ensembl_gene_id: PBPRA0322
symbol: SO0233
gene_biotype: protein_coding
description:
  Putative ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: PBPRA0323
symbol: rplB
gene_biotype: protein_coding
description:
  Putative ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: PBPRA0324
symbol: SO0235
gene_biotype: protein_coding
description:
  Putative ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: PBPRA0325
symbol: SO0236
gene_biotype: protein_coding
description:
  Putative ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity).


ensembl_gene_id: PBPRA0326
symbol: PLU4720
gene_biotype: protein_coding
description:
  Putative ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: PBPRA0327
symbol: STY4365
gene_biotype: protein_coding
description:
  Putative ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: PBPRA0328
symbol: VV0383
gene_biotype: protein_coding
description:
  Putative ribosomal protein L29; Predicted by orpheus program; predicted by glimmer program; Belongs to the universal ribosomal protein uL29 family.


ensembl_gene_id: PBPRA0329
symbol: PM1406
gene_biotype: protein_coding
description:
  Putative ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: PBPRA0330
symbol: STY4368
gene_biotype: protein_coding
description:
  Putative ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: PBPRA0331
symbol: Y4000
gene_biotype: protein_coding
description:
  Putative ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.


ensembl_gene_id: PBPRA0332
symbol: PLU4714
gene_biotype: protein_coding
description:
  Putative ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: PBPRA0333
symbol: PLU4713
gene_biotype: protein_coding
description:
  Putative ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.


ensembl_gene_id: PBPRA0334
symbol: PLU4712
gene_biotype: protein_coding
description:
  Putative ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: PBPRA0335
symbol: PM1400
gene_biotype: protein_coding
description:
  Putative ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: PBPRA0336
symbol: PLU4710
gene_biotype: protein_coding
description:
  Putative ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: PBPRA0337
symbol: HD1961
gene_biotype: protein_coding
description:
  Putative ribosomal subunit protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: PBPRA0339
symbol: RPLO
gene_biotype: protein_coding
description:
  Putative ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: PBPRA0340
symbol: STY4378
gene_biotype: protein_coding
description:
  Putative preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: PBPRA0341
symbol: BPP0053
gene_biotype: protein_coding
description:
  Putative ribosomal protein L36; Predicted by orpheus program; predicted by glimmer program; Belongs to the bacterial ribosomal protein bL36 family.


ensembl_gene_id: PBPRA0342
symbol: VV0396
gene_biotype: protein_coding
description:
  Putative ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: PBPRA0343
symbol: HD1953
gene_biotype: protein_coding
description:
  Putative ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: PBPRA0344
symbol: rpsD
gene_biotype: protein_coding
description:
  Putative ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: PBPRA0345
symbol: rpoA
gene_biotype: protein_coding
description:
  Putative DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: PBPRA0349
symbol: PBPRA0349
gene_biotype: protein_coding
description:
  Putative periplasmic protein involved in polysaccharide export; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0351
symbol: VP1476
gene_biotype: protein_coding
description:
  Hypothetical anti-anti-sigma regulatory factor; Predicted by orpheus program; predicted by glimmer program; Belongs to the anti-sigma-factor antagonist family.


ensembl_gene_id: PBPRA0352
symbol: PBPRA0352
gene_biotype: protein_coding
description:
  Hypothetical intercellular adhesion protein A; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0354
symbol: VP1462
gene_biotype: protein_coding
description:
  Hypothetical polysaccharide export protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0357
symbol: VP1464
gene_biotype: protein_coding
description:
  Putative membrane protein of ExoQ family, involved in exopolysaccharide production; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0366
symbol: SO2276-3
gene_biotype: protein_coding
description:
  Putative transposase and inactivated derivative [Vibrio vulnificus YJ016]; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0369
symbol: C4970
gene_biotype: protein_coding
description:
  Putative homoserine O-succinyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine; Belongs to the MetA family.


ensembl_gene_id: PBPRA0372
symbol: PA4065
gene_biotype: protein_coding
description:
  Putative ABC-type antimicrobial peptide transport system, permease component; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0378
symbol: MSRA
gene_biotype: protein_coding
description:
  Putative peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: PBPRA0383
symbol: SF4264
gene_biotype: protein_coding
description:
  Putative inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: PBPRA0385
symbol: MPL
gene_biotype: protein_coding
description:
  Putative UDP-N-acetylmuramate-alanine ligase; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate. Belongs to the MurCDEF family. Mpl subfamily.


ensembl_gene_id: PBPRA0386
symbol: CV3337
gene_biotype: protein_coding
description:
  Putative 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: PBPRA0388
symbol: SMB20291
gene_biotype: protein_coding
description:
  Putative TRAP-type uncharacterized transport system, fused permease component; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0393
symbol: STY3484
gene_biotype: protein_coding
description:
  Putative octaprenyl-diphosphate synthase; Predicted by orpheus program; predicted by glimmer program; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: PBPRA0394
symbol: HD0203
gene_biotype: protein_coding
description:
  Putative Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: PBPRA0395
symbol: RPMA
gene_biotype: protein_coding
description:
  Putative Ribosomal protein L27; Predicted by orpheus program; predicted by glimmer program; Belongs to the bacterial ribosomal protein bL27 family.


ensembl_gene_id: PBPRA0397
symbol: STY3480
gene_biotype: protein_coding
description:
  Putative GTP1/Obg family protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: PBPRA0399
symbol: STM0087
gene_biotype: protein_coding
description:
  Putative Dihydrofolate reductase; Predicted by orpheus program; predicted by glimmer program; Belongs to the dihydrofolate reductase family.


ensembl_gene_id: PBPRA0400
symbol: S0048
gene_biotype: protein_coding
description:
  Putative bis(5-nucleosyl)-tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.


ensembl_gene_id: PBPRA0402
symbol: SF0048
gene_biotype: protein_coding
description:
  Putative dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: PBPRA0403
symbol: VV0479
gene_biotype: protein_coding
description:
  Putative Pyridoxal phosphate biosynthesis protein; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).


ensembl_gene_id: PBPRA0404
symbol: SURA
gene_biotype: protein_coding
description:
  Putative survival protein SurA; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation.


ensembl_gene_id: PBPRA0405
symbol: SO3636
gene_biotype: protein_coding
description:
  Hypothetical organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.


ensembl_gene_id: PBPRA0406
symbol: S0054
gene_biotype: protein_coding
description:
  Putative DnaJ-related protein; Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB/RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host.


ensembl_gene_id: PBPRA0407
symbol: ATU5333
gene_biotype: protein_coding
description:
  Putative 2-hydroxyacid dehydrogenase family protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: PBPRA0408
symbol: RLUA
gene_biotype: protein_coding
description:
  Putative ribosomal large subunit pseudouridine synthase A; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: PBPRA0409
symbol: rapA
gene_biotype: protein_coding
description:
  Putative RNA polymerase-associated protein HepA; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily.


ensembl_gene_id: PBPRA0411
symbol: ECS0070
gene_biotype: protein_coding
description:
  Putative thiamine ABC transporter; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family.


ensembl_gene_id: PBPRA0412
symbol: T0111
gene_biotype: protein_coding
description:
  Putative thiamine ABC transporter,permease protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0413
symbol: STY0125
gene_biotype: protein_coding
description:
  Putative ABC-type thiamine transport system,periplasmic component; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0416
symbol: VV0484
gene_biotype: protein_coding
description:
  Putative-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: PBPRA0417
symbol: leuC
gene_biotype: protein_coding
description:
  Putative 3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: PBPRA0418
symbol: leuB
gene_biotype: protein_coding
description:
  Putative Isocitrate/isopropylmalatedehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. Belongs to the isocitrate and isopropylmalate dehydrogenases family. LeuB type 1 subfamily.


ensembl_gene_id: PBPRA0419
symbol: leuA
gene_biotype: protein_coding
description:
  Putative 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: PBPRA0422
symbol: VV21320
gene_biotype: protein_coding
description:
  Putative Cation/multidrug efflux pump; Predicted by orpheus program; predicted by glimmer program; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: PBPRA0424
symbol: Y3641
gene_biotype: protein_coding
description:
  Putative long-chain-fatty-acid-CoAligase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0425
symbol: ILVI
gene_biotype: protein_coding
description:
  Putative acetolactate synthase III, largesubunit; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0426
symbol: S0075
gene_biotype: protein_coding
description:
  Putative acetolactate synthase III, small subunit; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0428
symbol: Y1944
gene_biotype: protein_coding
description:
  Putative pyruvate kinase I; Predicted by orpheus program; predicted by glimmer program; Belongs to the pyruvate kinase family.


ensembl_gene_id: PBPRA0430
symbol: ECS3950
gene_biotype: protein_coding
description:
  Putative DNA-directed RNA polymerase, sigmasubunit; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: PBPRA0431
symbol: STY3389
gene_biotype: protein_coding
description:
  Putative DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: PBPRA0433
symbol: BFL058
gene_biotype: protein_coding
description:
  Putative ribosomal protein S21; Predicted by orpheus program; predicted by glimmer program; Belongs to the bacterial ribosomal protein bS21 family.


ensembl_gene_id: PBPRA0434
symbol: SF3105
gene_biotype: protein_coding
description:
  Putative O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: PBPRA0435
symbol: PLU3975
gene_biotype: protein_coding
description:
  Putative membrane protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: PBPRA0436
symbol: Z4411
gene_biotype: protein_coding
description:
  Putative Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: PBPRA0437
symbol: XAC0686
gene_biotype: protein_coding
description:
  Hypothetical 2-amino-4-hydroxy-6-hydroxymethyldihydr opteridine pyrophosphokinase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0438
symbol: SAV7021
gene_biotype: protein_coding
description:
  Putative undecaprenol kinase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: PBPRA0439
symbol: SF3097
gene_biotype: protein_coding
description:
  Putative tRNA nucleotidyltransferase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases.


ensembl_gene_id: PBPRA0440
symbol: SO1297
gene_biotype: protein_coding
description:
  Putative general secretion pathway protein A; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0447
symbol: PBPRA0447
gene_biotype: protein_coding
description:
  Putative methyl-accepting chemotaxis protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0448
symbol: GLNE
gene_biotype: protein_coding
description:
  Putative glutamate-ammonia-ligase adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the sign [...]


ensembl_gene_id: PBPRA0449
symbol: ECS3935
gene_biotype: protein_coding
description:
  Putative ADP-heptose synthase; Catalyzes the phosphorylation of D-glycero-D-manno-heptose 7- phosphate at the C-1 position to selectively form D-glycero-beta-D- manno-heptose-1,7-bisphosphate; In the C-terminal section; belongs to the cytidylyltransferase family.


ensembl_gene_id: PBPRA0453
symbol: PLU3952
gene_biotype: protein_coding
description:
  Putative cyclic AMP phosphodiesterase; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.


ensembl_gene_id: PBPRA0455
symbol: S3275
gene_biotype: protein_coding
description:
  Putative topoisomerase IV, subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily.


ensembl_gene_id: PBPRA0456
symbol: PARC
gene_biotype: protein_coding
description:
  Putative DNA topoisomerase IV; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.


ensembl_gene_id: PBPRA0457
symbol: PLU2275
gene_biotype: protein_coding
description:
  Putative D-xylose isomerase; Predicted by orpheus program; predicted by glimmer program; Belongs to the xylose isomerase family.


ensembl_gene_id: PBPRA0462
symbol: RS02191
gene_biotype: protein_coding
description:
  Putative xylose binding periplasmic protein of ABC transport system; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0463
symbol: RS02192
gene_biotype: protein_coding
description:
  Putative D-xylose transport ATP-binding protein xylG; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.


ensembl_gene_id: PBPRA0464
symbol: RSP1635
gene_biotype: protein_coding
description:
  Putative inner membrane permease of D-xyloseABC transporter; Predicted by orpheus program; predicted by glimmer program; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: PBPRA0466
symbol: PSPTO300
gene_biotype: protein_coding
description:
  Putative xylose operon regulatory protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0468
symbol: S3266
gene_biotype: protein_coding
description:
  Putative 1-acyl-sn-glycerol-3-phosphateacyltransferase; Predicted by orpheus program; predicted by glimmer program; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.


ensembl_gene_id: PBPRA0469
symbol: MVAD
gene_biotype: protein_coding
description:
  Hypothetical isopentenyldiphosphate isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).


ensembl_gene_id: PBPRA0470
symbol: ECS3993
gene_biotype: protein_coding
description:
  Putative translation initiation inhibitor; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0473
symbol: PYRI
gene_biotype: protein_coding
description:
  Putative aspartate carbamoyltransferase, regulatory subunit; Involved in allosteric regulation of aspartate carbamoyltransferase.


ensembl_gene_id: PBPRA0474
symbol: PYRB
gene_biotype: protein_coding
description:
  Putative aspartate transcarbamylase catalytic subunit; Predicted by orpheus program; predicted by glimmer program; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: PBPRA0475
symbol: ARCB
gene_biotype: protein_coding
description:
  Putative ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.


ensembl_gene_id: PBPRA0476
symbol: CV3780
gene_biotype: protein_coding
description:
  Putative carbamate kinase; Predicted by orpheus program; predicted by glimmer program; Belongs to the carbamate kinase family.


ensembl_gene_id: PBPRA0479
symbol: YJGD
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome.


ensembl_gene_id: PBPRA0481
symbol: SO0916
gene_biotype: protein_coding
description:
  Hypothetical transcriptional regulator, MarR family; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0483
symbol: ECS5235
gene_biotype: protein_coding
description:
  Putative Valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: PBPRA0484
symbol: SF4229
gene_biotype: protein_coding
description:
  Putative aminopeptidase A/I; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: PBPRA0495
symbol: VC1281
gene_biotype: protein_coding
description:
  Phosphotransferase system cellobiose-specific component IIB; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0496
symbol: BA5448
gene_biotype: protein_coding
description:
  Putative Phosphotransferase system cellobiose-specific component IIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.


ensembl_gene_id: PBPRA0499
symbol: STY3156
gene_biotype: protein_coding
description:
  Putative transcription regulator LacI family; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0513
symbol: SO2874-4
gene_biotype: protein_coding
description:
  Putative transposase and inactivatedderivatives; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0516
symbol: ALL3964
gene_biotype: protein_coding
description:
  Putative phosphoglucomutase/phosphomannomutase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0517
symbol: CEPA
gene_biotype: protein_coding
description:
  Putative N,N-diacetylchitobiose phosphorylase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0518
symbol: CHB
gene_biotype: protein_coding
description:
  Hypothetical N-acetyl-beta-hexosaminidase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0521
symbol: VV21177
gene_biotype: protein_coding
description:
  Putative ABC-type oligopeptide transport system, ATPase component; Predicted by orpheus program; predicted by glimmer program; Belongs to the ABC transporter superfamily.


ensembl_gene_id: PBPRA0523
symbol: PYRAB153
gene_biotype: protein_coding
description:
  Putative peptide ABC transporter, permeaseprotein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0525
symbol: VVA0132
gene_biotype: protein_coding
description:
  Putative peptide ABC transporter, periplasmicpeptide-binding protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0526
symbol: VP2478
gene_biotype: protein_coding
description:
  Hypothetical sensory box sensor histidine kinase/response regulator; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0527
symbol: YPO0427
gene_biotype: protein_coding
description:
  Hypothetical 16S RNA G1207 methylase RsmC; Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle; Belongs to the methyltransferase superfamily. RsmC family.


ensembl_gene_id: PBPRA0529
symbol: HEML
gene_biotype: protein_coding
description:
  Putative glutamate-1-semialdehyde 2,1-aminomutase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0533
symbol: PA0668
gene_biotype: protein_coding
description:
  Putative tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.


ensembl_gene_id: PBPRA0536
symbol: PLU0905
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC.


ensembl_gene_id: PBPRA0537
symbol: VV0634
gene_biotype: protein_coding
description:
  Hypothetical cobalamin biosynthesis protein CbiB; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0538
symbol: PFS
gene_biotype: protein_coding
description:
  Putative MTA/SAH nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.


ensembl_gene_id: PBPRA0539
symbol: SF3253
gene_biotype: protein_coding
description:
  Putative glutamate synthase, small subunit; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0540
symbol: C3973
gene_biotype: protein_coding
description:
  Putative glutamate synthase, large subunit; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0544
symbol: VV10551
gene_biotype: protein_coding
description:
  Hypothetical sensory box/GGDEF family protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0547
symbol: SO3988
gene_biotype: protein_coding
description:
  Putative aerobic respiration control protein FexA; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0549
symbol: VV0648
gene_biotype: protein_coding
description:
  Putative s-adenosylmethionine:2-demethylmenaquinone methyltransferase; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions (By similarity).


ensembl_gene_id: PBPRA0551
symbol: aceK
gene_biotype: protein_coding
description:
  Hypothetical isocitrate dehydrogenase kinase/phosphatase; Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation.


ensembl_gene_id: PBPRA0552
symbol: Y3718
gene_biotype: protein_coding
description:
  Putative aspartokinase I/homoserine dehydrogenase; Predicted by orpheus program; predicted by glimmer program; In the C-terminal section; belongs to the homoserine dehydrogenase family.


ensembl_gene_id: PBPRA0553
symbol: SF0003
gene_biotype: protein_coding
description:
  Putative homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: PBPRA0555
symbol: GLTP
gene_biotype: protein_coding
description:
  Hypothetical sodium:dicarboxylate symporter; Predicted by orpheus program; predicted by glimmer program; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: PBPRA0556
symbol: S2814
gene_biotype: protein_coding
description:
  Putative formate acetyl transferase-related protein; Acts as a radical domain for damaged PFL and possibly other radical proteins.


ensembl_gene_id: PBPRA0557
symbol: nfo
gene_biotype: protein_coding
description:
  Putative endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic (AP) sites, generating a 3'-hydroxyl group and a 5'-terminal sugar phosphate.


ensembl_gene_id: PBPRA0558
symbol: S2815
gene_biotype: protein_coding
description:
  Putative uracil-DNA-glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: PBPRA0561
symbol: PBPRA0561
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the UPF0246 family.


ensembl_gene_id: PBPRA0562
symbol: STY2836
gene_biotype: protein_coding
description:
  Putative ATP-dependent RNA helicase SrmB; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit at low temperature. Exhibits RNA-stimulated ATP hydrolysis and RNA unwinding activity; Belongs to the DEAD box helicase family. SrmB subfamily.


ensembl_gene_id: PBPRA0563
symbol: SO0948
gene_biotype: protein_coding
description:
  Hypothetical O-methyltransferase; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC).


ensembl_gene_id: PBPRA0564
symbol: C0511
gene_biotype: protein_coding
description:
  Putative branched chain amino acid transport system II carrier protein; Component of the transport system for branched-chain amino acids.


ensembl_gene_id: PBPRA0565
symbol: YPO0893
gene_biotype: protein_coding
description:
  Putative flavodoxin 2; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family.


ensembl_gene_id: PBPRA0566
symbol: VP0509
gene_biotype: protein_coding
description:
  Putative integrase/recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: PBPRA0567
symbol: PLU3551
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.


ensembl_gene_id: PBPRA0568
symbol: SF2878
gene_biotype: protein_coding
description:
  Putative single-stranded-DNA-specific exonuclease RecJ; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0569
symbol: PLU3549
gene_biotype: protein_coding
description:
  Putative peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: PBPRA0570
symbol: lysS
gene_biotype: protein_coding
description:
  Putative lysyl-tRNA synthetase; Predicted by orpheus program; predicted by glimmer program; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: PBPRA0571
symbol: VPA1609
gene_biotype: protein_coding
description:
  Putative Sodium/glutamate symporter; Predicted by orpheus program; predicted by glimmer program; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: PBPRA0572
symbol: CPSR
gene_biotype: protein_coding
description:
  Putative sigma-54 dependent transcriptional regulator; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0574
symbol: TAS
gene_biotype: protein_coding
description:
  Putative oxidoreductase Tas, aldo/keto reductase family; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0576
symbol: ECS3688
gene_biotype: protein_coding
description:
  Putative DNA mismatch repair protein MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences. It is involved in DNA mismatch repair; Belongs to the MutH family.


ensembl_gene_id: PBPRA0577
symbol: HD0172
gene_biotype: protein_coding
description:
  Putative MutT/nudix family protein; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.


ensembl_gene_id: PBPRA0578
symbol: PTSP
gene_biotype: protein_coding
description:
  Hypothetical phosphoenolpyruvate-protein phosphotransferase; Predicted by orpheus program; predicted by glimmer program; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: PBPRA0580
symbol: PM0080
gene_biotype: protein_coding
description:
  Putative prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: PBPRA0581
symbol: VV0679
gene_biotype: protein_coding
description:
  Putative thymidylate synthetase (thyA); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: PBPRA0582
symbol: RB11050
gene_biotype: protein_coding
description:
  Putative sodium-dependent phosphate pump NptA; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0583
symbol: NHAA
gene_biotype: protein_coding
description:
  Putative Na+/H+ antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.


ensembl_gene_id: PBPRA0585
symbol: ECS0018
gene_biotype: protein_coding
description:
  Putative transcriptional activator protein NhaR; Predicted by orpheus program; predicted by glimmer program; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: PBPRA0590
symbol: SO3533
gene_biotype: protein_coding
description:
  Putative FAD synthase; Predicted by orpheus program; predicted by glimmer program; Belongs to the ribF family.


ensembl_gene_id: PBPRA0591
symbol: ECS0029
gene_biotype: protein_coding
description:
  Putative Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: PBPRA0592
symbol: S0026
gene_biotype: protein_coding
description:
  Putative lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: PBPRA0593
symbol: FKPB
gene_biotype: protein_coding
description:
  Putative peptidyl-prolyl cis-trans isomerase, FKBP-type; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0594
symbol: S0028
gene_biotype: protein_coding
description:
  Putative LytB protein; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: PBPRA0595
symbol: dapB
gene_biotype: protein_coding
description:
  Putative dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate.


ensembl_gene_id: PBPRA0596
symbol: SF0029
gene_biotype: protein_coding
description:
  Putative carbamoyl-phosphate synthase, small subunit; Predicted by orpheus program; predicted by glimmer program; Belongs to the CarA family.


ensembl_gene_id: PBPRA0597
symbol: CARB
gene_biotype: protein_coding
description:
  Putative carbamoylphosphate synthase large subunit; Predicted by orpheus program; predicted by glimmer program; Belongs to the CarB family.


ensembl_gene_id: PBPRA0599
symbol: S3440
gene_biotype: protein_coding
description:
  Hypothetical D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0600
symbol: VV2720
gene_biotype: protein_coding
description:
  ompL_phopr porin-like protein L precursor; Forms pores that allow passive diffusion of small molecules across the outer membrane; Belongs to the Gram-negative porin family.


ensembl_gene_id: PBPRA0601
symbol: HD1699
gene_biotype: protein_coding
description:
  Putative transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: PBPRA0603
symbol: PLU4536
gene_biotype: protein_coding
description:
  23S rRNA methylase; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.


ensembl_gene_id: PBPRA0604
symbol: YPO3502
gene_biotype: protein_coding
description:
  Putative cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: PBPRA0606
symbol: ECS4055
gene_biotype: protein_coding
description:
  Putative phosphoglucomutase/phosphomannomutasefamily protein MrsA; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: PBPRA0607
symbol: PLU4532
gene_biotype: protein_coding
description:
  Putative protein export-membrane protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: PBPRA0610
symbol: HD1463
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: PBPRA0611
symbol: T3205
gene_biotype: protein_coding
description:
  Putative transcription pausing L factor; Participates in both transcription termination and antitermination.


ensembl_gene_id: PBPRA0612
symbol: infB
gene_biotype: protein_coding
description:
  Putative initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: PBPRA0613
symbol: PBPRA0613
gene_biotype: protein_coding
description:
  Putative ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: PBPRA0614
symbol: EBIG1690
gene_biotype: protein_coding
description:
  Putative tRNA pseudouridine 5S synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: PBPRA0615
symbol: RPS15
gene_biotype: protein_coding
description:
  Putative ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.


ensembl_gene_id: PBPRA0616
symbol: C3920
gene_biotype: protein_coding
description:
  Putative polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: PBPRA0620
symbol: VV2690
gene_biotype: protein_coding
description:
  Putative c-di-GMP phosphodiesterase A-related protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0623
symbol: VV2687
gene_biotype: protein_coding
description:
  Putative DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown.


ensembl_gene_id: PBPRA0624
symbol: RIMI
gene_biotype: protein_coding
description:
  Putative ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.


ensembl_gene_id: PBPRA0625
symbol: PBPRA0625
gene_biotype: protein_coding
description:
  Putative peptide chain release factor RF-3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: PBPRA0627
symbol: PMT1397
gene_biotype: protein_coding
description:
  Putative glycogen operon protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: PBPRA0629
symbol: HD0887
gene_biotype: protein_coding
description:
  Putative NupC family protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family.


ensembl_gene_id: PBPRA0630
symbol: deoC
gene_biotype: protein_coding
description:
  Putative Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 2 subfamily.


ensembl_gene_id: PBPRA0631
symbol: SO1218
gene_biotype: protein_coding
description:
  Putative thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family.


ensembl_gene_id: PBPRA0632
symbol: deoB
gene_biotype: protein_coding
description:
  Putative phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: PBPRA0633
symbol: C5468
gene_biotype: protein_coding
description:
  Putative purine nucleoside phosphorylase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0634
symbol: VC2346
gene_biotype: protein_coding
description:
  Putative SerB-cotransposed membrane protein precursor; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0637
symbol: PM0252
gene_biotype: protein_coding
description:
  Hypothetical ATP-dependent protease; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: PBPRA0638
symbol: HP1543
gene_biotype: protein_coding
description:
  Hypothetical ToxR-activated protein TagE; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0639
symbol: PSPTO463
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein.


ensembl_gene_id: PBPRA0641
symbol: SF4424
gene_biotype: protein_coding
description:
  Hypothetical soluble lytic murein transglycosylase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0642
symbol: TRPR
gene_biotype: protein_coding
description:
  Putative trp operon repressor; This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription.


ensembl_gene_id: PBPRA0643
symbol: VV0708
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA/RNA precursor pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions.


ensembl_gene_id: PBPRA0650
symbol: VPA0560
gene_biotype: protein_coding
description:
  Putative ABC transporter ATP-binding protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0657
symbol: VPA1044
gene_biotype: protein_coding
description:
  Hypothetical serine/threonine protein kinase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0664
symbol: STP1
gene_biotype: protein_coding
description:
  Hypothetical serine/threonine protein phosphatase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0673
symbol: CLPB
gene_biotype: protein_coding
description:
  Putative ATPase with chaperone activity; Predicted by orpheus program; predicted by glimmer program; Belongs to the ClpA/ClpB family.


ensembl_gene_id: PBPRA0690
symbol: smpB
gene_biotype: protein_coding
description:
  Putative small protein B,tmRNA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The [...]


ensembl_gene_id: PBPRA0692
symbol: HD1828
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the UPF0125 (RnfH) family.


ensembl_gene_id: PBPRA0693
symbol: PLU3375
gene_biotype: protein_coding
description:
  Hypothetical small protein A; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: PBPRA0695
symbol: PPNK
gene_biotype: protein_coding
description:
  Putative sugar kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: PBPRA0696
symbol: PLU3372
gene_biotype: protein_coding
description:
  Putative heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several round [...]


ensembl_gene_id: PBPRA0698
symbol: ECS0015
gene_biotype: protein_coding
description:
  Putative DnaJ protein, DnaJ-class molecular chaperone with C-terminal Zn finger domain; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cyc [...]


ensembl_gene_id: PBPRA0699
symbol: PA4556
gene_biotype: protein_coding
description:
  Hypothetical fimbrial assembly protein PilE; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0714
symbol: LMO0547
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, SorC family; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0715
symbol: T0481
gene_biotype: protein_coding
description:
  Hypothetical penicillin-insensitive mureinendopeptidase; Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus.


ensembl_gene_id: PBPRA0718
symbol: SF0331
gene_biotype: protein_coding
description:
  Hypothetical recombination associated protein RdgC; May be involved in recombination; Belongs to the RdgC family.


ensembl_gene_id: PBPRA0719
symbol: CT1148
gene_biotype: protein_coding
description:
  Hypothetical exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: PBPRA0721
symbol: STY0432
gene_biotype: protein_coding
description:
  Putative DNA-binding response regulator PhoB; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0726
symbol: S2694
gene_biotype: protein_coding
description:
  Putative polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: PBPRA0728
symbol: YPO2835
gene_biotype: protein_coding
description:
  Hypothetical phosphate ABC transporter, permease protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0729
symbol: PP5327
gene_biotype: protein_coding
description:
  Putative phosphate ABC transporter, permease protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0730
symbol: VV0730
gene_biotype: protein_coding
description:
  Putative ABC-type phosphate transport system,ATPase component; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: PBPRA0731
symbol: PLU0218
gene_biotype: protein_coding
description:
  Putative phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake.


ensembl_gene_id: PBPRA0734
symbol: CUTC
gene_biotype: protein_coding
description:
  Hypothetical copper homeostasis protein; Participates in the control of copper homeostasis. Belongs to the CutC family.


ensembl_gene_id: PBPRA0737
symbol: C4971
gene_biotype: protein_coding
description:
  Putative malate synthase A; Predicted by orpheus program; predicted by glimmer program; Belongs to the malate synthase family.


ensembl_gene_id: PBPRA0740
symbol: BC4661
gene_biotype: protein_coding
description:
  Putative acetoin utilization protein AcuB; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0741
symbol: PBPRA0741
gene_biotype: protein_coding
description:
  Hypothetical trypsin-like serine protease; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0742
symbol: QUEA
gene_biotype: protein_coding
description:
  Putative S-adenosylmethionine:tRNAribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: PBPRA0743
symbol: TGT
gene_biotype: protein_coding
description:
  Putative queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose t [...]


ensembl_gene_id: PBPRA0744
symbol: PLU3903
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.


ensembl_gene_id: PBPRA0745
symbol: C0518
gene_biotype: protein_coding
description:
  Putative protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: PBPRA0746
symbol: SF0346
gene_biotype: protein_coding
description:
  Putative preprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: PBPRA0747
symbol: SUHB
gene_biotype: protein_coding
description:
  Putative inositol monophosphate family protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the inositol monophosphatase superfamily.


ensembl_gene_id: PBPRA0748
symbol: Y1332
gene_biotype: protein_coding
description:
  Putative RNA methyltransferase, TrmH family; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.


ensembl_gene_id: PBPRA0749
symbol: STY2790
gene_biotype: protein_coding
description:
  Hypothetical transcriptional regulator; Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins.


ensembl_gene_id: PBPRA0750
symbol: PLU3283
gene_biotype: protein_coding
description:
  Putative aminotransferase NifS, class V; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.


ensembl_gene_id: PBPRA0751
symbol: CV1093
gene_biotype: protein_coding
description:
  Putative NifU-related protein; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.


ensembl_gene_id: PBPRA0752
symbol: STM2541
gene_biotype: protein_coding
description:
  Putative hesB family protein; Is able to transfer iron-sulfur clusters to apo-ferredoxin. Multiple cycles of [2Fe2S] cluster formation and transfer are observed, suggesting that IscA acts catalytically. Recruits intracellular free iron so as to provide iron for the assembly of transient iron-sulfur cluster in IscU in the presence of IscS, L-cysteine and the thioredoxin reductase system; Belongs to the HesB/IscA family.


ensembl_gene_id: PBPRA0753
symbol: HSCB
gene_biotype: protein_coding
description:
  Putative chaperone protein HscB; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family.


ensembl_gene_id: PBPRA0754
symbol: VV0759
gene_biotype: protein_coding
description:
  Putative chaperone protein HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB.


ensembl_gene_id: PBPRA0757
symbol: SF2570
gene_biotype: protein_coding
description:
  Putative peptidase B (Aminopeptidase B); Probably plays an important role in intracellular peptide degradation.


ensembl_gene_id: PBPRA0759
symbol: PLU1372
gene_biotype: protein_coding
description:
  Putative nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: PBPRA0760
symbol: YPO2882
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: PBPRA0761
symbol: PA3805
gene_biotype: protein_coding
description:
  Hypothetical fimbrial biogenesis and twitching motility protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0763
symbol: SF2561
gene_biotype: protein_coding
description:
  Putative gcpE protein; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: PBPRA0766
symbol: STY2765
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: PBPRA0767
symbol: YFGK
gene_biotype: protein_coding
description:
  Putative GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: PBPRA0771
symbol: PSPTO091
gene_biotype: protein_coding
description:
  Hypothetical methyl-accepting chemotaxis protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0774
symbol: PBPRA0774
gene_biotype: protein_coding
description:
  Hypothetical chemotaxis histidine protein kinase, CheA; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0777
symbol: S2024
gene_biotype: protein_coding
description:
  Hypothetical chemotaxis protein methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.


ensembl_gene_id: PBPRA0778
symbol: XAC1888
gene_biotype: protein_coding
description:
  Protein-glutamate methylesterase/protein-glutamine glutaminase 1; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: PBPRA0779
symbol: XSEA
gene_biotype: protein_coding
description:
  Putative exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: PBPRA0780
symbol: T0346
gene_biotype: protein_coding
description:
  Putative inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: PBPRA0782
symbol: PM1104
gene_biotype: protein_coding
description:
  Putative p-aminobenzoyl-glutamatetransporter; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0784
symbol: PA3629
gene_biotype: protein_coding
description:
  Putative alcohol dehydrogenase class III; Predicted by orpheus program; predicted by glimmer program; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.


ensembl_gene_id: PBPRA0786
symbol: STM2568
gene_biotype: protein_coding
description:
  Putative cytosine/adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: PBPRA0787
symbol: C3081
gene_biotype: protein_coding
description:
  Putative transglycosylase, Slt family; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella. In the N-terminal section; belongs to the bacterial solute- binding protein 3 family.


ensembl_gene_id: PBPRA0788
symbol: PLU3317
gene_biotype: protein_coding
description:
  Putative phosphoribosylformylglycinamidine (FGAM) synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.


ensembl_gene_id: PBPRA0793
symbol: YPO2911
gene_biotype: protein_coding
description:
  Putative nitrogen regulatory protein P-II; Predicted by orpheus program; predicted by glimmer program; Belongs to the P(II) protein family.


ensembl_gene_id: PBPRA0795
symbol: GLYA
gene_biotype: protein_coding
description:
  Putative serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: PBPRA0796
symbol: PLU3900
gene_biotype: protein_coding
description:
  Putative RibX; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: PBPRA0797
symbol: STY0455
gene_biotype: protein_coding
description:
  Putative pyrimidine deaminase/pyrimidine reductase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: PBPRA0799
symbol: SO3467
gene_biotype: protein_coding
description:
  Putative 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.


ensembl_gene_id: PBPRA0800
symbol: SO3466
gene_biotype: protein_coding
description:
  Putative 6,7-dimethyl-8-ribityllumazine synthase (DMRL synthase) (Lumazine synthase); Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family.


ensembl_gene_id: PBPRA0801
symbol: NUSB
gene_biotype: protein_coding
description:
  Putative NusB protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: PBPRA0802
symbol: STY0458
gene_biotype: protein_coding
description:
  Putative thiamin-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: PBPRA0803
symbol: ECS0471
gene_biotype: protein_coding
description:
  Putative phosphatidylglycerophosphatase A; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).


ensembl_gene_id: PBPRA0805
symbol: dxs
gene_biotype: protein_coding
description:
  Putative deoxyxylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: PBPRA0806
symbol: C0532
gene_biotype: protein_coding
description:
  Putative geranyltranstransferase; Predicted by orpheus program; predicted by glimmer program; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: PBPRA0807
symbol: XSEB
gene_biotype: protein_coding
description:
  Putative exodeoxyribonuclease, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: PBPRA0808
symbol: RB9269
gene_biotype: protein_coding
description:
  Putative sodium-driven polar flagellar protein MotA; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0809
symbol: SO1530
gene_biotype: protein_coding
description:
  Putative sodium-driven polar flagellar protein MotB; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0810
symbol: thiI
gene_biotype: protein_coding
description:
  Putative thiamin biosynthesis protein, ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.


ensembl_gene_id: PBPRA0811
symbol: STY0472
gene_biotype: protein_coding
description:
  Putative 4-methyl-5(B-hydroxyethyl)-thiazol monophosphate biosynthesis enzyme; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0812
symbol: APBA
gene_biotype: protein_coding
description:
  Hypothetical 2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.


ensembl_gene_id: PBPRA0813
symbol: EBIG1874
gene_biotype: protein_coding
description:
  Putative outer membrane protein ompK precursor; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0817
symbol: STY4324
gene_biotype: protein_coding
description:
  Putative peptidyl-prolyl cis-trans isomerase A; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: PBPRA0819
symbol: YGJO
gene_biotype: protein_coding
description:
  Hypothetical methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA.


ensembl_gene_id: PBPRA0820
symbol: ECS0489
gene_biotype: protein_coding
description:
  Putative cell division protein BolA; Predicted by orpheus program; predicted by glimmer program; Belongs to the BolA/IbaG family.


ensembl_gene_id: PBPRA0821
symbol: VP1911
gene_biotype: protein_coding
description:
  Hypothetical extracellular solute-binding protein, family 7; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.


ensembl_gene_id: PBPRA0823
symbol: SO1103
gene_biotype: protein_coding
description:
  Putative sodium-translocating NADH-quinone reductase, subunit A; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.


ensembl_gene_id: PBPRA0824
symbol: HD0380
gene_biotype: protein_coding
description:
  Putative | Na+-transporting NADH:ubiquinoneoxidoreductase, subunit NqrB; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.


ensembl_gene_id: PBPRA0825
symbol: HD0381
gene_biotype: protein_coding
description:
  Putative sodium-translocating NADH-quinonereductase, subunit C; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.


ensembl_gene_id: PBPRA0826
symbol: HD0382
gene_biotype: protein_coding
description:
  Putative NADH:ubiquinone oxidoreductase, Natranslocating, hydrophobic membrane protein NqrD; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family.


ensembl_gene_id: PBPRA0827
symbol: PLU1200
gene_biotype: protein_coding
description:
  Putative sodium-translocating NADH-quinone reductase, subunit E; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family.


ensembl_gene_id: PBPRA0828
symbol: SO1108
gene_biotype: protein_coding
description:
  Putative Na+-transporting NADH:ubiquinoneoxidoreductase, subunit NqrF; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway.


ensembl_gene_id: PBPRA0829
symbol: PM1334
gene_biotype: protein_coding
description:
  Putative thiamin biosynthesis lipoprotein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.


ensembl_gene_id: PBPRA0832
symbol: S0300
gene_biotype: protein_coding
description:
  Putative DNA-damage-inducible protein P; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: PBPRA0833
symbol: SF0285
gene_biotype: protein_coding
description:
  Putative aminoacyl-histidine dipeptidase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0835
symbol: PP4284
gene_biotype: protein_coding
description:
  Putative xanthine/uracil permease family protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0836
symbol: PLU1241
gene_biotype: protein_coding
description:
  Putative xanthine-guanine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.


ensembl_gene_id: PBPRA0837
symbol: PBPRA0837
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the UPF0255 family.


ensembl_gene_id: PBPRA0838
symbol: YPO3223
gene_biotype: protein_coding
description:
  Hypothetical transcriptional regulator Crl; Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes. Stimulates RNA polymerase holoenzyme formation and may bind to several other sigma factors, such as sigma-70 and sigma-32; Belongs to the Crl family.


ensembl_gene_id: PBPRA0839
symbol: PLU1243
gene_biotype: protein_coding
description:
  Putative glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: PBPRA0840
symbol: proA
gene_biotype: protein_coding
description:
  Putative gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: PBPRA0843
symbol: Y1426
gene_biotype: protein_coding
description:
  Putative D,D-carboxypeptidase-related protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0844
symbol: T0376
gene_biotype: protein_coding
description:
  Putative succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.


ensembl_gene_id: PBPRA0845
symbol: S2664
gene_biotype: protein_coding
description:
  Hypothetical arsenate reductase; Predicted by orpheus program; predicted by glimmer program; Belongs to the ArsC family.


ensembl_gene_id: PBPRA0848
symbol: VPA0396
gene_biotype: protein_coding
description:
  Hypothetical outer membrane lipoprotein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0849
symbol: PM1810
gene_biotype: protein_coding
description:
  Putative nitrate/nitrite response regulator protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0850
symbol: T0379
gene_biotype: protein_coding
description:
  Hypothetical nitrate/nitrite sensor protein NarQ; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0851
symbol: T0604
gene_biotype: protein_coding
description:
  Hypothetical iron-sulfur cluster-binding protein NapF; Could be involved in the maturation of NapA, the catalytic subunit of the periplasmic nitrate reductase, before its export into the periplasm; Belongs to the NapF family.


ensembl_gene_id: PBPRA0852
symbol: YPO3039
gene_biotype: protein_coding
description:
  Putative NapD protein; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.


ensembl_gene_id: PBPRA0853
symbol: SF2290
gene_biotype: protein_coding
description:
  Putative periplasmic nitrate reductase; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.


ensembl_gene_id: PBPRA0854
symbol: YPO3037
gene_biotype: protein_coding
description:
  Putative periplasmic nitrate reductase,cytochrome c-type protein; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.


ensembl_gene_id: PBPRA0855
symbol: BB2802
gene_biotype: protein_coding
description:
  Putative periplasmic nitrate reductase, cytochrome c-type protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0861
symbol: PLU1392
gene_biotype: protein_coding
description:
  Putative PTS system, glucose-specific IIAcomponent; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0862
symbol: Y1487
gene_biotype: protein_coding
description:
  Putative phosphoenolpyruvate-proteinphosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: PBPRA0864
symbol: C2948
gene_biotype: protein_coding
description:
  Putative cysteine synthase A; Predicted by orpheus program; predicted by glimmer program; Belongs to the cysteine synthase/cystathionine beta- synthase family.


ensembl_gene_id: PBPRA0865
symbol: PLU1396
gene_biotype: protein_coding
description:
  Putative CysZ, uncharacterized protein involved in cysteine biosynthesis; High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway; Belongs to the CysZ family.


ensembl_gene_id: PBPRA0866
symbol: zipA
gene_biotype: protein_coding
description:
  Hypothetical cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.


ensembl_gene_id: PBPRA0867
symbol: LIG
gene_biotype: protein_coding
description:
  Putative NAD-dependent DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: PBPRA0874
symbol: gltX
gene_biotype: protein_coding
description:
  Putative glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: PBPRA0877
symbol: VP0380
gene_biotype: protein_coding
description:
  Hypothetical integrase; Predicted by orpheus program; predicted by glimmer program; Belongs to the 'phage' integrase family.


ensembl_gene_id: PBPRA0883
symbol: XF2722
gene_biotype: protein_coding
description:
  Hypothetical type I restriction-modification system specificity determinant; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0886
symbol: FNV1836
gene_biotype: protein_coding
description:
  Putative type I restriction enzyme HsdR; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0897
symbol: FLGM
gene_biotype: protein_coding
description:
  Putative negative regulator of flagellin synthesis FlgM; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0898
symbol: VV0957
gene_biotype: protein_coding
description:
  Putative FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.


ensembl_gene_id: PBPRA0900
symbol: PSPTO192
gene_biotype: protein_coding
description:
  Putative chemotaxis protein methyltransferase CheR; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0901
symbol: PA1077
gene_biotype: protein_coding
description:
  Putative polar flagellar FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: PBPRA0902
symbol: PSPTO193
gene_biotype: protein_coding
description:
  Putative flagellar basal body rod protein FlgC; Predicted by orpheus program; predicted by glimmer program; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: PBPRA0903
symbol: PSPTO193-2
gene_biotype: protein_coding
description:
  Putative basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.


ensembl_gene_id: PBPRA0905
symbol: PSPTO193-4
gene_biotype: protein_coding
description:
  Putative flagellar basal-body rod protein FlgF; Predicted by orpheus program; predicted by glimmer program; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: PBPRA0906
symbol: XAC1981
gene_biotype: protein_coding
description:
  Putative polar flagellar FlgG; Predicted by orpheus program; predicted by glimmer program; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: PBPRA0907
symbol: YPO0729
gene_biotype: protein_coding
description:
  Putative flagellar L-ring protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: PBPRA0908
symbol: FLGI
gene_biotype: protein_coding
description:
  Putative flagellar P-ring protein FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: PBPRA0910
symbol: VV0969
gene_biotype: protein_coding
description:
  Hypothetical flagellar hook-associated protein FlgM; Predicted by orpheus program; predicted by glimmer program; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: PBPRA0911
symbol: VV0970
gene_biotype: protein_coding
description:
  Hypothetical flagellar hook-associated protein FlgL; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0912
symbol: VV0971
gene_biotype: protein_coding
description:
  Putative flagellin A; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: PBPRA0913
symbol: VV0974
gene_biotype: protein_coding
description:
  Putative flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: PBPRA0915
symbol: PBPRA0915
gene_biotype: protein_coding
description:
  Putative flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: PBPRA0916
symbol: VV2488
gene_biotype: protein_coding
description:
  Hypothetical flagellar rod protein FlaI; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0920
symbol: PSPTO195-3
gene_biotype: protein_coding
description:
  Putative sensory box sensor histidine kinase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0922
symbol: SO3229
gene_biotype: protein_coding
description:
  Putative flagellar hook-basal body protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0923
symbol: SO3228
gene_biotype: protein_coding
description:
  Putative polar flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: PBPRA0924
symbol: XAC1953
gene_biotype: protein_coding
description:
  Putative polar flagellar motor switch protein; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.


ensembl_gene_id: PBPRA0925
symbol: FLIH
gene_biotype: protein_coding
description:
  Hypothetical polar flagellar assembly protein, FliH; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0926
symbol: PLU1945
gene_biotype: protein_coding
description:
  Putative polar flagellum-specific ATP synthase FliI; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0928
symbol: PBPRA0928
gene_biotype: protein_coding
description:
  Hypothetical polar flagellar hook-length control protein FliK; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0929
symbol: SO3222
gene_biotype: protein_coding
description:
  Hypothetical flagellar protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: PBPRA0930
symbol: XAC1947
gene_biotype: protein_coding
description:
  Putative flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.


ensembl_gene_id: PBPRA0931
symbol: XAC1946
gene_biotype: protein_coding
description:
  Putative polar flagellar switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.


ensembl_gene_id: PBPRA0932
symbol: PSPTO197-2
gene_biotype: protein_coding
description:
  Putative polar flagellar assembly protein, FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: PBPRA0933
symbol: PSPTO197-3
gene_biotype: protein_coding
description:
  Putative polar flagellar assembly protein, FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: PBPRA0934
symbol: PP4353
gene_biotype: protein_coding
description:
  Putative polar flagellar assembly protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: PBPRA0935
symbol: PSPTO197-4
gene_biotype: protein_coding
description:
  Putative flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: PBPRA0936
symbol: NE2488
gene_biotype: protein_coding
description:
  Polar flagellar assembly protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: PBPRA0937
symbol: PBPRA0937
gene_biotype: protein_coding
description:
  Hypothetical flagellar biosynthesis protein FlhF; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0939
symbol: PSPTO197-5
gene_biotype: protein_coding
description:
  Putative flagellar-specific RNA polymerase sigma factor, FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.


ensembl_gene_id: PBPRA0941
symbol: SO3208
gene_biotype: protein_coding
description:
  Putative chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).


ensembl_gene_id: PBPRA0943
symbol: PSPTO198-2
gene_biotype: protein_coding
description:
  Protein-glutamate methylesterase, chemotaxis protein CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: PBPRA0944
symbol: XCC1889
gene_biotype: protein_coding
description:
  Putative SOJ-like and chromosome partitioning protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0946
symbol: PA1464
gene_biotype: protein_coding
description:
  Putative purine-binding chemotaxis protein CheW; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0948
symbol: ECS3090
gene_biotype: protein_coding
description:
  Putative heme exporter protein A; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.


ensembl_gene_id: PBPRA0949
symbol: SO0262
gene_biotype: protein_coding
description:
  Putative heme exporter protein B; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family.


ensembl_gene_id: PBPRA0950
symbol: PM0007
gene_biotype: protein_coding
description:
  Putative heme exporter protein C; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.


ensembl_gene_id: PBPRA0951
symbol: PM0009
gene_biotype: protein_coding
description:
  Putative cytochrome c-type biogenesis proteinCcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.


ensembl_gene_id: PBPRA0952
symbol: S2410
gene_biotype: protein_coding
description:
  Putative cytochrome c-type biogenesis protein CcmF; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0953
symbol: C2732
gene_biotype: protein_coding
description:
  Putative thiol:disulfide interchange protein DsbE; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0955
symbol: PBPRA0955
gene_biotype: protein_coding
description:
  Hypothetical cytochrome c-type biogenesis protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0957
symbol: YPO2744
gene_biotype: protein_coding
description:
  Putative long-chain fatty acid transport protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0960
symbol: SO3096
gene_biotype: protein_coding
description:
  Putative RNA polymerase sigma-70 factor; Predicted by orpheus program; predicted by glimmer program; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: PBPRA0961
symbol: SF2420
gene_biotype: protein_coding
description:
  Putative fatty oxidation complex, beta subunit; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed.


ensembl_gene_id: PBPRA0962
symbol: C2886
gene_biotype: protein_coding
description:
  Putative fatty oxidation complex, alpha subunit; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: PBPRA0963
symbol: SO3083
gene_biotype: protein_coding
description:
  Putative peptidase, insulinase family; Predicted by orpheus program; predicted by glimmer program; Belongs to the peptidase M16 family.


ensembl_gene_id: PBPRA0964
symbol: ECS3223
gene_biotype: protein_coding
description:
  Hypothetical phosphohistidine phosphatase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0966
symbol: VV2436
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the UPF0115 family.


ensembl_gene_id: PBPRA0967
symbol: YFCB
gene_biotype: protein_coding
description:
  Putative adenine-specific methylase; Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue; Belongs to the protein N5-glutamine methyltransferase family. PrmB subfamily.


ensembl_gene_id: PBPRA0968
symbol: ECS0498
gene_biotype: protein_coding
description:
  Putative exsB protein; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.


ensembl_gene_id: PBPRA0969
symbol: SCO1028
gene_biotype: protein_coding
description:
  Putative cysteine synthase/cystathionine (CysK); Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0970
symbol: Y1038
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, AsnC family; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0971
symbol: Z0557
gene_biotype: protein_coding
description:
  Putative transport ATP-binding protein MsbA; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0972
symbol: PLU3858
gene_biotype: protein_coding
description:
  Putative ATP-binding component of a transport system; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0974
symbol: STY0509
gene_biotype: protein_coding
description:
  Hypothetical lipoprotein-related protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0975
symbol: Y1045
gene_biotype: protein_coding
description:
  Putative methylated DNA-proteincysteine methyltransferase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0982
symbol: BPP4108
gene_biotype: protein_coding
description:
  Hypothetical copper resistance protein B precursor; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0986
symbol: IRLR
gene_biotype: protein_coding
description:
  Putative two component response regulator transcription regulator protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA0991
symbol: PBPRA0991
gene_biotype: protein_coding
description:
  Hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: PBPRA0993
symbol: AT
gene_biotype: protein_coding
description:
  Hypothetical amidinotransferase family protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1003
symbol: S0490
gene_biotype: protein_coding
description:
  Putative cation efflux system transmembrane protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: PBPRA1004
symbol: PBPRA1004
gene_biotype: protein_coding
description:
  Putative cation efflux system transmembrane protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: PBPRA1005
symbol: VV20850
gene_biotype: protein_coding
description:
  Hypothetical outer membrane cation efflux protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1008
symbol: VVA1156
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, MarR family; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1010
symbol: YPO3127
gene_biotype: protein_coding
description:
  Hypothetical primosomal replication protein N``; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1012
symbol: ompH
gene_biotype: protein_coding
description:
  OmpH porin-like protein H precursor; Forms pores that allow passive diffusion of small molecules across the outer membrane; Belongs to the Gram-negative porin family.


ensembl_gene_id: PBPRA1013
symbol: PBPRA1013
gene_biotype: protein_coding
description:
  Hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the UPF0319 family.


ensembl_gene_id: PBPRA1014
symbol: SO2005
gene_biotype: protein_coding
description:
  Hypothetical dksA-type zinc finger protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1016
symbol: S0421
gene_biotype: protein_coding
description:
  Putative adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: PBPRA1017
symbol: dnaX
gene_biotype: protein_coding
description:
  Hypothetical DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: PBPRA1018
symbol: HD0326
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: PBPRA1019
symbol: RECR
gene_biotype: protein_coding
description:
  Putative recombinational DNA repair protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: PBPRA1024
symbol: S0426
gene_biotype: protein_coding
description:
  Putative adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: PBPRA1025
symbol: hemH
gene_biotype: protein_coding
description:
  Putative ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: PBPRA1027
symbol: Y1198
gene_biotype: protein_coding
description:
  Putative asparagine synthetase B, glutamine-hydrolyzing; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1028
symbol: SO0695
gene_biotype: protein_coding
description:
  Putative glutathione-regulated potassium-efflux system protein KefB; Predicted by orpheus program; predicted by glimmer program; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: PBPRA1030
symbol: T2192
gene_biotype: protein_coding
description:
  Putative N-acetylglucosamine-6-phosphatedeacetylase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1031
symbol: VVA0028
gene_biotype: protein_coding
description:
  Putative glucosamine-6-phosphate isomerase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.


ensembl_gene_id: PBPRA1032
symbol: PTS18CBA
gene_biotype: protein_coding
description:
  Putative PTS permease for N-acetylglucosamine and glucose; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1035
symbol: FUR
gene_biotype: protein_coding
description:
  Putative Fur, Fe2+/Zn2+ uptake regulation proteins; Predicted by orpheus program; predicted by glimmer program; Belongs to the Fur family.


ensembl_gene_id: PBPRA1036
symbol: PM0353
gene_biotype: protein_coding
description:
  Putative flavodoxin 1; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family.


ensembl_gene_id: PBPRA1039
symbol: Z0836
gene_biotype: protein_coding
description:
  Putative SeqA protein; Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated.


ensembl_gene_id: PBPRA1043
symbol: STY0773
gene_biotype: protein_coding
description:
  Putative citrate synthase; Predicted by orpheus program; predicted by glimmer program; Belongs to the citrate synthase family.


ensembl_gene_id: PBPRA1045
symbol: YPO1110
gene_biotype: protein_coding
description:
  Putative succinate dehydrogenase, hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH).


ensembl_gene_id: PBPRA1046
symbol: YPO1111
gene_biotype: protein_coding
description:
  Putative succinate dehydrogenase, flavoprotein subunit; Predicted by orpheus program; predicted by glimmer program; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.


ensembl_gene_id: PBPRA1047
symbol: STY0778
gene_biotype: protein_coding
description:
  Putative succinate dehydrogenase, iron-sulfur protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.


ensembl_gene_id: PBPRA1048
symbol: T2140
gene_biotype: protein_coding
description:
  Putative 2-oxoglutarate dehydrogenase, E1 component; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1049
symbol: SUCB
gene_biotype: protein_coding
description:
  Putative 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: PBPRA1050
symbol: PLU1432
gene_biotype: protein_coding
description:
  Putative succinyl-CoA synthase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: PBPRA1051
symbol: STY0782
gene_biotype: protein_coding
description:
  Putative succinyl-CoA synthase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: PBPRA1053
symbol: ZUNB
gene_biotype: protein_coding
description:
  Putative ABC-type Mn2+/Zn2+ transport system, permease component; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1054
symbol: STM1892
gene_biotype: protein_coding
description:
  Putative zinc ABC transporter, ATP-binding protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.


ensembl_gene_id: PBPRA1055
symbol: T0986
gene_biotype: protein_coding
description:
  Hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: PBPRA1056
symbol: C2271
gene_biotype: protein_coding
description:
  Hypothetical zinc ABC transporter, periplasmiczinc-binding protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1057
symbol: ECS2566
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, possible membrane protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1058
symbol: STY4291
gene_biotype: protein_coding
description:
  Putative ferrous iron transport protein A; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1059
symbol: TLR1740
gene_biotype: protein_coding
description:
  Putative ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: PBPRA1061
symbol: BLR8122
gene_biotype: protein_coding
description:
  Hypothetical diadenosine tetraphosphate hydrolase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1066
symbol: Z2008
gene_biotype: protein_coding
description:
  Putative formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).


ensembl_gene_id: PBPRA1070
symbol: S1535
gene_biotype: protein_coding
description:
  Putative ATP-dependent helicase, DinG family; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1073
symbol: PLU2133
gene_biotype: protein_coding
description:
  Hypothetical starvation-inducible outer membrane lipoprotein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1075
symbol: FADD
gene_biotype: protein_coding
description:
  Putative long-chain-fatty-acid-CoA ligase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1076
symbol: RND
gene_biotype: protein_coding
description:
  Hypothetical ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family.


ensembl_gene_id: PBPRA1077
symbol: MINE
gene_biotype: protein_coding
description:
  Putative cell division topological specificity factor; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: PBPRA1078
symbol: SO2577
gene_biotype: protein_coding
description:
  Putative septum site-determining protein MinD; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1079
symbol: S1249
gene_biotype: protein_coding
description:
  Putative septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: PBPRA1082
symbol: HNSA
gene_biotype: protein_coding
description:
  Putative DNA-binding protein H-NS; Predicted by orpheus program; predicted by glimmer program; Belongs to the histone-like protein H-NS family.


ensembl_gene_id: PBPRA1085
symbol: VV12913
gene_biotype: protein_coding
description:
  Putative phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase; Predicted by orpheus program; predicted by glimmer program; In the C-terminal section; belongs to the PRA-PH family.


ensembl_gene_id: PBPRA1086
symbol: S2208
gene_biotype: protein_coding
description:
  Putative imidazoleglycerol-phosphate synthase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: PBPRA1087
symbol: hisA
gene_biotype: protein_coding
description:
  Putative phosphoribosylformimino-5-aminoimidazole carboxamideribonucleotide isomerase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1088
symbol: SF2085
gene_biotype: protein_coding
description:
  Putative glutamine amidotransferase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: PBPRA1089
symbol: hisB
gene_biotype: protein_coding
description:
  Putative imidazoleglycerol-phosphatedehydratase/histidinol- phosphatase; Predicted by orpheus program; predicted by glimmer program; In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family.


ensembl_gene_id: PBPRA1090
symbol: hisC
gene_biotype: protein_coding
description:
  Putative histidinol-phosphate aminotransferase; Predicted by orpheus program; predicted by glimmer program; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: PBPRA1091
symbol: VV1351
gene_biotype: protein_coding
description:
  Putative histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: PBPRA1092
symbol: HISG
gene_biotype: protein_coding
description:
  Putative ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity (By similarity); Belongs to the ATP phosphoribosyltransferase family. Long subfamily.


ensembl_gene_id: PBPRA1094
symbol: VV11139
gene_biotype: protein_coding
description:
  Putative signal transduction protein containing EAL and modified HD-GYP domains; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1096
symbol: SF0455
gene_biotype: protein_coding
description:
  Putative UDP-2,3-diacylglucosamine hydrolase; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: PBPRA1097
symbol: ECS0587
gene_biotype: protein_coding
description:
  Putative peptidyl-prolyl cis-trans isomerase B; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: PBPRA1098
symbol: S0465
gene_biotype: protein_coding
description:
  Putative cysteinyl-tRNA synthetase; Predicted by orpheus program; predicted by glimmer program; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: PBPRA1100
symbol: T0582
gene_biotype: protein_coding
description:
  Putative glycerophosphoryl diester phosphodiesterase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1103
symbol: ADHE
gene_biotype: protein_coding
description:
  Putative alcohol dehydrogenase/acetaldehyde dehydrogenase; Predicted by orpheus program; predicted by glimmer program; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.


ensembl_gene_id: PBPRA1104
symbol: VP2120
gene_biotype: protein_coding
description:
  Hypothetical oxidoreductase, short-chaindehydrogenase/reductase family; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1109
symbol: YECP
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs.


ensembl_gene_id: PBPRA1110
symbol: S2001
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM).


ensembl_gene_id: PBPRA1112
symbol: SF1876
gene_biotype: protein_coding
description:
  Putative aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: PBPRA1114
symbol: ruvC
gene_biotype: protein_coding
description:
  Putative crossover junctionendodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: PBPRA1116
symbol: ruvA
gene_biotype: protein_coding
description:
  Putative holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: PBPRA1117
symbol: ruvB
gene_biotype: protein_coding
description:
  Putative holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: PBPRA1118
symbol: SF0729
gene_biotype: protein_coding
description:
  Putative excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits di [...]


ensembl_gene_id: PBPRA1121
symbol: C0861
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.


ensembl_gene_id: PBPRA1124
symbol: S0772
gene_biotype: protein_coding
description:
  Putative molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: PBPRA1125
symbol: MOAC
gene_biotype: protein_coding
description:
  Putative molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: PBPRA1127
symbol: MOAE
gene_biotype: protein_coding
description:
  Putative molybdenum cofactor biosynthesisprotein E; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1131
symbol: OPPA
gene_biotype: protein_coding
description:
  Putative oligopeptide ABC transporter,periplasmic oligopeptide-binding protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1132
symbol: PLU2492
gene_biotype: protein_coding
description:
  Putative oligopeptide ABC transporter, permeaseprotein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1134
symbol: Y2029
gene_biotype: protein_coding
description:
  Putative oligopeptide ABC transporter,ATP-binding protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the ABC transporter superfamily.


ensembl_gene_id: PBPRA1143
symbol: NE1420
gene_biotype: protein_coding
description:
  Hypothetical oxidoreductase; Predicted by orpheus program; predicted by glimmer program; Belongs to the FAD-dependent oxidoreductase family.


ensembl_gene_id: PBPRA1145
symbol: T1688
gene_biotype: protein_coding
description:
  Putative adenylosuccinate lyase; Predicted by orpheus program; predicted by glimmer program; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.


ensembl_gene_id: PBPRA1147
symbol: YCFB
gene_biotype: protein_coding
description:
  Putative (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: PBPRA1148
symbol: VV2326
gene_biotype: protein_coding
description:
  Putative pseudouridine synthase family 1protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: PBPRA1149
symbol: T1682
gene_biotype: protein_coding
description:
  Putative isocitrate dehydrogenase, specific forNADP+; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1151
symbol: clpS
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: PBPRA1152
symbol: YPO1368
gene_biotype: protein_coding
description:
  Putative ATP-dependent Clp protease, ATP-binding subunit ClpA; Predicted by orpheus program; predicted by glimmer program; Belongs to the ClpA/ClpB family.


ensembl_gene_id: PBPRA1153
symbol: infA
gene_biotype: protein_coding
description:
  Putative initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: PBPRA1154
symbol: bpt
gene_biotype: protein_coding
description:
  Hypothetical arginyl-tRNA-protein transferase-related protein; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.


ensembl_gene_id: PBPRA1155
symbol: PLU1596
gene_biotype: protein_coding
description:
  Hypothetical leucyl/phenylalanyl-tRNA-proteintransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: PBPRA1157
symbol: SF0845
gene_biotype: protein_coding
description:
  Putative transport ATP-binding protein CydC; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1158
symbol: STM0957
gene_biotype: protein_coding
description:
  Putative transport ATP-binding protein CydD; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1160
symbol: CV2022
gene_biotype: protein_coding
description:
  Putative alanine dehydrogenase; Predicted by orpheus program; predicted by glimmer program; Belongs to the AlaDH/PNT family.


ensembl_gene_id: PBPRA1161
symbol: PLU1600
gene_biotype: protein_coding
description:
  Putative leucine-responsive regulatory protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1162
symbol: PBPRA1162
gene_biotype: protein_coding
description:
  Hypothetical cell division protein FtsK; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1163
symbol: LOLA
gene_biotype: protein_coding
description:
  Hypothetical outer membrane lipoproteins carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: PBPRA1165
symbol: SERS
gene_biotype: protein_coding
description:
  Putative seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: PBPRA1167
symbol: OB0021
gene_biotype: protein_coding
description:
  Putative proton/glutamate symporter; Predicted by orpheus program; predicted by glimmer program; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: PBPRA1168
symbol: METG
gene_biotype: protein_coding
description:
  Putative methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: PBPRA1169
symbol: SF2178
gene_biotype: protein_coding
description:
  Hypothetical Mrp protein (ATPases involved in chromosome partitioning); Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: PBPRA1178
symbol: STM4301
gene_biotype: protein_coding
description:
  Putative anaerobic C4-dicarboxylate transporter; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.


ensembl_gene_id: PBPRA1179
symbol: VP0175
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the PsiE family.


ensembl_gene_id: PBPRA1180
symbol: SO1039
gene_biotype: protein_coding
description:
  Putative cob(I)alamin adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.


ensembl_gene_id: PBPRA1181
symbol: VV1475
gene_biotype: protein_coding
description:
  Cobalamin 5-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: PBPRA1182
symbol: VV1474
gene_biotype: protein_coding
description:
  Hypothetical nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: PBPRA1184
symbol: PA2978
gene_biotype: protein_coding
description:
  Putative phosphotyrosine protein phosphatase; Predicted by orpheus program; predicted by glimmer program; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: PBPRA1185
symbol: PSPTO359
gene_biotype: protein_coding
description:
  Putative sulfate permease family protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1186
symbol: T1734
gene_biotype: protein_coding
description:
  Putative ribonuclease E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily.


ensembl_gene_id: PBPRA1187
symbol: RLUC
gene_biotype: protein_coding
description:
  Putative 23S rRNA ribosomal pseudouridinesynthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: PBPRA1188
symbol: RSC1042
gene_biotype: protein_coding
description:
  Hypothetical hydrolase, haloacid dehalogenase-likefamily; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1189
symbol: SO2782
gene_biotype: protein_coding
description:
  Hypothetical Maf-like protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes 7- methyl-GTP (m(7)GTP). May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids; Belongs to the Maf family. YceF subfamily.


ensembl_gene_id: PBPRA1191
symbol: SO2780
gene_biotype: protein_coding
description:
  Putative ribosomal protein L32 (rpL32); Predicted by orpheus program; predicted by glimmer program; Belongs to the bacterial ribosomal protein bL32 family.


ensembl_gene_id: PBPRA1192
symbol: plsX
gene_biotype: protein_coding
description:
  Putative fatty acid/phospholipid synthesisprotein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: PBPRA1193
symbol: FABH
gene_biotype: protein_coding
description:
  Putative 3-oxoacyl-(acyl-carrier-protein)synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: PBPRA1194
symbol: SO2777
gene_biotype: protein_coding
description:
  Putative malonyl Coa-acyl carrier protein transacylase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1195
symbol: FABG
gene_biotype: protein_coding
description:
  Putative 3-oxoacyl-(acyl-carrier-protein) reductase, FabG; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: PBPRA1196
symbol: BB3755
gene_biotype: protein_coding
description:
  Putative acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.


ensembl_gene_id: PBPRA1197
symbol: FABF-1
gene_biotype: protein_coding
description:
  Beta-ketoacyl-acyl carrier protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: PBPRA1198
symbol: S1180
gene_biotype: protein_coding
description:
  Hypothetical 4-amino-4-deoxychorismate lyase(ADC lyase); Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1199
symbol: HD1932
gene_biotype: protein_coding
description:
  Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: PBPRA1200
symbol: HD1933
gene_biotype: protein_coding
description:
  Putative thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: PBPRA1201
symbol: VV13001
gene_biotype: protein_coding
description:
  Hypothetical DNA polymerase III, delta prime subunit; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1203
symbol: SF1105
gene_biotype: protein_coding
description:
  Putative PTS system, glucose-specific IIBC; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1208
symbol: PLU1968
gene_biotype: protein_coding
description:
  Hypothetical D-serine deaminase activator; Predicted by orpheus program; predicted by glimmer program; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: PBPRA1210
symbol: STM1647
gene_biotype: protein_coding
description:
  Putative D-Lactate dehydrogenase; Predicted by orpheus program; predicted by glimmer program; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: PBPRA1214
symbol: AF0848
gene_biotype: protein_coding
description:
  Putative inosine monophosphate dehydrogenase-related protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1215
symbol: SO1918
gene_biotype: protein_coding
description:
  Hypothetical MATE efflux family protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1221
symbol: Z5353
gene_biotype: protein_coding
description:
  Putative uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the PNP/UDP phosphorylase family.


ensembl_gene_id: PBPRA1224
symbol: S4512
gene_biotype: protein_coding
description:
  Putative PTS system, trehalose-specific IIBCcomponent; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1225
symbol: STM4453
gene_biotype: protein_coding
description:
  Putative trehalose-6-phosphate hydrolase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1227
symbol: YPO1438
gene_biotype: protein_coding
description:
  Putative efflux (PET) family transporter; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1230
symbol: MGSA
gene_biotype: protein_coding
description:
  Putative methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.


ensembl_gene_id: PBPRA1234
symbol: VP2428
gene_biotype: protein_coding
description:
  Putative translation elongation factor EF-G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...]


ensembl_gene_id: PBPRA1235
symbol: Y2574
gene_biotype: protein_coding
description:
  Putative RIO1/ZK632.3/MJ0444 family protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1239
symbol: STY1683
gene_biotype: protein_coding
description:
  Putative oxidoreductase, aldo/keto reductase 2; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1240
symbol: Z2789
gene_biotype: protein_coding
description:
  Putative thiosulfate sulfur transferase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1241
symbol: RB8368
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the UPF0176 family.


ensembl_gene_id: PBPRA1247
symbol: CBU0772
gene_biotype: protein_coding
description:
  Putative methylcitrate synthase; Predicted by orpheus program; predicted by glimmer program; Belongs to the citrate synthase family.


ensembl_gene_id: PBPRA1251
symbol: PBPRA1251
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the MEMO1 family.


ensembl_gene_id: PBPRA1252
symbol: PAB1859
gene_biotype: protein_coding
description:
  Hypothetical pyruvate formate lyase-activating enzyme; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1257
symbol: NRFF_2
gene_biotype: protein_coding
description:
  Hypothetical formate-dependent nitrite reductase complex, NrfG protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1258
symbol: C5066
gene_biotype: protein_coding
description:
  Putative Formate-dependent nitrite reductase,periplasmic cytochrome c552 subunit; Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process; Belongs to the cytochrome c-552 family.


ensembl_gene_id: PBPRA1259
symbol: STM4278
gene_biotype: protein_coding
description:
  Hypothetical cytochrome c-type protein NrfB precursor; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1260
symbol: HD0349
gene_biotype: protein_coding
description:
  Putative nitrite reductase, Fe-S protein (NrfC); Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1261
symbol: S3600
gene_biotype: protein_coding
description:
  Putative nitrate reductase, formate dependent (NrfD); Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1262
symbol: PM0010
gene_biotype: protein_coding
description:
  Hypothetical cytochrome c-type biogenesis protein CcmF; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1263
symbol: PHG219
gene_biotype: protein_coding
description:
  Hypothetical thiol:disulfide interchange protein DsbE; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1271
symbol: RSP1186
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, rpiR family; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1272
symbol: RSP1187
gene_biotype: protein_coding
description:
  Putative N-acyl-D-aspartate/D-glutamate deacylase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1273
symbol: AGR_PAT_
gene_biotype: protein_coding
description:
  Putative translation initiationinhibitor, yjgF family; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1274
symbol: VVA1143
gene_biotype: protein_coding
description:
  Putative Na+/proline symporter; Predicted by orpheus program; predicted by glimmer program; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: PBPRA1275
symbol: ECS4406
gene_biotype: protein_coding
description:
  Hypothetical 2-dehydro-3-deoxygluconokinase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1276
symbol: PLU0178
gene_biotype: protein_coding
description:
  Putative 2-keto-3-deoxy-6-phosphogluconatealdolase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1278
symbol: PP0496
gene_biotype: protein_coding
description:
  Hypothetical amino acid carrier protein(sodium/alanine symporter); Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1281
symbol: PBPRA1281
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.


ensembl_gene_id: PBPRA1283
symbol: DUR1
gene_biotype: protein_coding
description:
  Hypothetical allophanate hydrolase subunit 2; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1287
symbol: OB0669
gene_biotype: protein_coding
description:
  Hypothetical long-chain-fatty-acid-CoAligase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1291
symbol: PBPRA1291
gene_biotype: protein_coding
description:
  Hypothetical pirin-related protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the pirin family.


ensembl_gene_id: PBPRA1295
symbol: PA4034
gene_biotype: protein_coding
description:
  Putative aquaporin Z; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family.


ensembl_gene_id: PBPRA1296
symbol: ENSANGG0
gene_biotype: protein_coding
description:
  Hypothetical transcriptional regulator; Predicted by orpheus program; predicted by glimmer program; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: PBPRA1297
symbol: CPE1621
gene_biotype: protein_coding
description:
  Hypothetical cation efflux system component; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1301
symbol: WS0018
gene_biotype: protein_coding
description:
  Putative outer membrane phospholipase A precursor; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family.


ensembl_gene_id: PBPRA1303
symbol: STY4680
gene_biotype: protein_coding
description:
  Hypothetical integrase for prophage CP-933V; Predicted by orpheus program; predicted by glimmer program; Belongs to the 'phage' integrase family.


ensembl_gene_id: PBPRA1305
symbol: VVA0790
gene_biotype: protein_coding
description:
  Hypothetical helix-turn-helix XRE-family like proteins; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1310
symbol: ECS1190
gene_biotype: protein_coding
description:
  Hypothetical bacteriophage replication protein P; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1336
symbol: RB3999
gene_biotype: protein_coding
description:
  Putative integrase; Predicted by orpheus program; predicted by glimmer program; Belongs to the 'phage' integrase family.


ensembl_gene_id: PBPRA1345
symbol: PBPRA1345
gene_biotype: protein_coding
description:
  Hypothetical tryptophan-specific transport protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1350
symbol: VCA0328
gene_biotype: protein_coding
description:
  Hypothetical biphenyl-2,3-diol 1,2-dioxygenase III-related protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1354
symbol: Z6045
gene_biotype: protein_coding
description:
  Hypothetical terminase encoded by prophage; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1356
symbol: BA4092
gene_biotype: protein_coding
description:
  Hypothetical protease/scaffold protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the peptidase S14 family.


ensembl_gene_id: PBPRA1361
symbol: CTC02186
gene_biotype: protein_coding
description:
  Hypothetical homoserine/homoserine lactone efflux protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1362
symbol: SO2874-6
gene_biotype: protein_coding
description:
  Putative transposase and inactivate derivatives; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1366
symbol: C0712
gene_biotype: protein_coding
description:
  Putative C4-dicarboxylate transporter,anaerobic; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1370
symbol: GLPC
gene_biotype: protein_coding
description:
  Putative anaerobic glycerol-3-phosphate dehydrogenase, subunit C; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1371
symbol: SF2324
gene_biotype: protein_coding
description:
  Hypothetical anaerobic glycerol-3-phosphatedehydrogenase, subunit B; Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor.


ensembl_gene_id: PBPRA1372
symbol: Y0404
gene_biotype: protein_coding
description:
  Putative anaerobic glycerol-3-phosphate dehydrogenase, subunit A; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1378
symbol: C4750
gene_biotype: protein_coding
description:
  Putative transcriptional activator; Predicted by orpheus program; predicted by glimmer program; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: PBPRA1379
symbol: METE
gene_biotype: protein_coding
description:
  Putative 5-Methyltetrahydropteroyltriglutamate-homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.


ensembl_gene_id: PBPRA1391
symbol: VVA0372
gene_biotype: protein_coding
description:
  Putative phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: PBPRA1393
symbol: SO4291
gene_biotype: protein_coding
description:
  Putative phosphate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: PBPRA1394
symbol: PSTS
gene_biotype: protein_coding
description:
  Putative phosphate ABC transporter, periplasmicphosphate-binding protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1396
symbol: CV2939
gene_biotype: protein_coding
description:
  Hypothetical transcriptional regulator, LysR family; Predicted by orpheus program; predicted by glimmer program; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: PBPRA1397
symbol: PLU0519
gene_biotype: protein_coding
description:
  Hypothetical NupC family protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family.


ensembl_gene_id: PBPRA1402
symbol: VV0507
gene_biotype: protein_coding
description:
  Hypothetical extracellular solute-binding protein,family 7; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.


ensembl_gene_id: PBPRA1404
symbol: AGR_PAT_-2
gene_biotype: protein_coding
description:
  Hypothetical permease component of C4 dicarboxylatetransporter; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1409
symbol: HP0138
gene_biotype: protein_coding
description:
  Conserved hypothetical iron-sulphur protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1411
symbol: VNG6383G
gene_biotype: protein_coding
description:
  Putative L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: PBPRA1425
symbol: T4028
gene_biotype: protein_coding
description:
  Putative Uroporphyrinogen-III methylase; Predicted by orpheus program; predicted by glimmer program; Belongs to the precorrin methyltransferase family.


ensembl_gene_id: PBPRA1427
symbol: RS03165
gene_biotype: protein_coding
description:
  Putative nitrite reductase (NAD(P)H) smallsubunit; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1428
symbol: C4141
gene_biotype: protein_coding
description:
  Putative nitrite reductase (NAD(P)H), large subunit; Predicted by orpheus program; predicted by glimmer program; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: PBPRA1430
symbol: Y3051
gene_biotype: protein_coding
description:
  Putative nicotinamide mononucleotide transporter; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1432
symbol: AGCG4342
gene_biotype: protein_coding
description:
  Putative cyclic nucleotide binding protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1433
symbol: C2323
gene_biotype: protein_coding
description:
  Putative tyrosine-specific transport protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1436
symbol: LYTE
gene_biotype: protein_coding
description:
  Hypothetical Cell wall-associated hydrolases; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1440
symbol: VCA0627
gene_biotype: protein_coding
description:
  Putative RNA methyltransferase, TrmH family; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1442
symbol: HD0838
gene_biotype: protein_coding
description:
  Putative glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: PBPRA1444
symbol: GND
gene_biotype: protein_coding
description:
  Putative 6-phosphogluconate dehydrogenase,decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.


ensembl_gene_id: PBPRA1448
symbol: PURU-2
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).


ensembl_gene_id: PBPRA1457
symbol: GLL2831
gene_biotype: protein_coding
description:
  Omega-3 polyunsaturated fatty acid synthase PfaD; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1458
symbol: PFAC
gene_biotype: protein_coding
description:
  Omega-3 polyunsaturated fatty acid synthase PfaC; Predicted by orpheus program; predicted by glimmer program; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: PBPRA1459
symbol: PFAB
gene_biotype: protein_coding
description:
  Omega-3 polyunsaturated fatty acid synthase PfaB; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1460
symbol: PFAA
gene_biotype: protein_coding
description:
  Omega-3 polyunsaturated fatty acid synthase PfaA; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1462
symbol: PD0832
gene_biotype: protein_coding
description:
  3-oxoacyl-acyl carrier protein synthase III; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1467
symbol: STY3956
gene_biotype: protein_coding
description:
  Putative trimethylamine-N-oxide reductase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1468
symbol: STM3823
gene_biotype: protein_coding
description:
  Putative cytochrome c-type protein TorC; Predicted by orpheus program; predicted by glimmer program; Belongs to the TorC/TorY family.


ensembl_gene_id: PBPRA1469
symbol: purC
gene_biotype: protein_coding
description:
  Putative phosphoribosylaminoimidazole-succinocar boxamide synthase; Predicted by orpheus program; predicted by glimmer program; Belongs to the SAICAR synthetase family.


ensembl_gene_id: PBPRA1475
symbol: AF0231
gene_biotype: protein_coding
description:
  Hypothetical binding protein component ofABC transporter; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1476
symbol: WS0280
gene_biotype: protein_coding
description:
  Hypothetical amino acid ABC transporter, permease protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1479
symbol: MA2961
gene_biotype: protein_coding
description:
  Hypothetical Na+/H+-dicarboxylate symporters; Predicted by orpheus program; predicted by glimmer program; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: PBPRA1485
symbol: ATU3887
gene_biotype: protein_coding
description:
  16 kDa heat shock protein A; Predicted by orpheus program; predicted by glimmer program; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: PBPRA1494
symbol: TORD
gene_biotype: protein_coding
description:
  Putative torD protein; Involved in the biogenesis of TorA. Acts on TorA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor; Belongs to the TorD/DmsD family. TorD subfamily.


ensembl_gene_id: PBPRA1495
symbol: T3696
gene_biotype: protein_coding
description:
  Putative trimethylamine-N-oxide reductase 1 precursor; Predicted by orpheus program; predicted by glimmer program; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: PBPRA1496
symbol: S1066
gene_biotype: protein_coding
description:
  Hypothetical trimethylamine N-oxide reductase,cytochrome c-type subunit; Predicted by orpheus program; predicted by glimmer program; Belongs to the TorC/TorY family.


ensembl_gene_id: PBPRA1497
symbol: S1065
gene_biotype: protein_coding
description:
  Putative DNA-binding response regulator TorR; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1505
symbol: VCA0504
gene_biotype: protein_coding
description:
  Putative DNA-damage-inducible protein J; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1510
symbol: BC4071
gene_biotype: protein_coding
description:
  Putative sodium-dependent transporter; Predicted by orpheus program; predicted by glimmer program; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.


ensembl_gene_id: PBPRA1512
symbol: PBPRA1512
gene_biotype: protein_coding
description:
  Hypothetical esterase of the alpha-betahydrolase superfamily; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1521
symbol: STY3981
gene_biotype: protein_coding
description:
  Putative multidrug resistance protein D; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1522
symbol: PBPRA1522
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the UPF0263 family.


ensembl_gene_id: PBPRA1527
symbol: VV21676
gene_biotype: protein_coding
description:
  Putative transport protein, PTR2 family; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1529
symbol: YDGR
gene_biotype: protein_coding
description:
  Putative PTR2 family transport protein; Proton-dependent permease that transports di- and tripeptides; Belongs to the PTR2/POT transporter (TC 2.A.17) family. DtpB subfamily.


ensembl_gene_id: PBPRA1534
symbol: PLU2869
gene_biotype: protein_coding
description:
  Putative ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family.


ensembl_gene_id: PBPRA1536
symbol: SF4190
gene_biotype: protein_coding
description:
  Hypothetical isoaspartyl dipeptidase; Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation.


ensembl_gene_id: PBPRA1537
symbol: PBPRA1537
gene_biotype: protein_coding
description:
  Hypothetical methylamine metabolism protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1540
symbol: BA3197
gene_biotype: protein_coding
description:
  Putative heavy metal membrane efflux protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1542
symbol: RB9551
gene_biotype: protein_coding
description:
  Putative arsenical pump-driving ATPase(Arsenite-translocating ATPase); Anion-transporting ATPase; Belongs to the arsA ATPase family.


ensembl_gene_id: PBPRA1544
symbol: RSUA
gene_biotype: protein_coding
description:
  Hypothetical 16S rRNA uridine-516 pseudouridylate synthase; Predicted by orpheus program; predicted by glimmer program; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: PBPRA1550
symbol: SYNW0229
gene_biotype: protein_coding
description:
  Hypothetical glycine betaine transporter; Predicted by orpheus program; predicted by glimmer program; Belongs to the BCCT transporter (TC 2.A.15) family.


ensembl_gene_id: PBPRA1551
symbol: YBJT
gene_biotype: protein_coding
description:
  Hypothetical nucleoside-diphosphate-sugar epimerase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1560
symbol: PA3304
gene_biotype: protein_coding
description:
  Putative membrane protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: PBPRA1563
symbol: STY0221
gene_biotype: protein_coding
description:
  Hypothetical iron(III) ABC transporter, permease protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: PBPRA1564
symbol: VPA1437
gene_biotype: protein_coding
description:
  Putative iron(III) ABC transporter, periplasmic iron-compound-binding protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1565
symbol: ECS0155
gene_biotype: protein_coding
description:
  Putative iron(III) ABC transporter, ATP-binding protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1567
symbol: MLL2715
gene_biotype: protein_coding
description:
  Putative hemolysin secretion ATP-binding protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1572
symbol: PP0792
gene_biotype: protein_coding
description:
  Putative fructose transport system repressor; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1573
symbol: FRUB
gene_biotype: protein_coding
description:
  Putative PTS system, fructose-specific IIA/FPR component; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1574
symbol: Y2886
gene_biotype: protein_coding
description:
  Putative 1-phosphofructokinase; Predicted by orpheus program; predicted by glimmer program; Belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: PBPRA1575
symbol: SF2252
gene_biotype: protein_coding
description:
  PTS system, fructose-specific IIBC component; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1578
symbol: PBPRA1578
gene_biotype: protein_coding
description:
  Hypothetical SulA, SOS-response cell division inhibitor, blocks FtsZring formation; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division.


ensembl_gene_id: PBPRA1625
symbol: NE2098
gene_biotype: protein_coding
description:
  Putative reverse transcriptase/maturase family protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1631
symbol: PG1355
gene_biotype: protein_coding
description:
  Hypothetical acyltransferase family protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1657
symbol: T2049
gene_biotype: protein_coding
description:
  Putative Uup, ATPase components of ABC transporters with duplicated ATPase domains; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1659
symbol: SA1014
gene_biotype: protein_coding
description:
  Conserved hypothetical transmembrane protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1661
symbol: PBPRA1661
gene_biotype: protein_coding
description:
  Hypothetical ABC transporterATP-binding/transmembrane protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1662
symbol: BA2370
gene_biotype: protein_coding
description:
  Putative EntE, Peptide arylation enzymes; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1668
symbol: PLU2320
gene_biotype: protein_coding
description:
  Hypothetical non-ribosomal peptide synthetase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1672
symbol: PBPRA1672
gene_biotype: protein_coding
description:
  Hypothetical transcriptional regulator, AraC family; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1684
symbol: PA2832
gene_biotype: protein_coding
description:
  Putative thiopurine methyltransferase; Predicted by orpheus program; predicted by glimmer program; Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family.


ensembl_gene_id: PBPRA1685
symbol: STM1883
gene_biotype: protein_coding
description:
  Putative phosphoribosylglycinamide formyltransferase 2; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family.


ensembl_gene_id: PBPRA1689
symbol: STM2183
gene_biotype: protein_coding
description:
  Putative cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis.


ensembl_gene_id: PBPRA1691
symbol: Z3396
gene_biotype: protein_coding
description:
  Putative effector of murein hydrolase LrgA; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1694
symbol: PBPRA1694
gene_biotype: protein_coding
description:
  Hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the 'phage' integrase family.


ensembl_gene_id: PBPRA1706
symbol: PP3985-5
gene_biotype: protein_coding
description:
  Transposase and inactivated derivatives; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1720
symbol: YHJO
gene_biotype: protein_coding
description:
  Putative cellulose synthase catalytic subunit [UDP-forming]; Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose.


ensembl_gene_id: PBPRA1721
symbol: BCSB
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.


ensembl_gene_id: PBPRA1724
symbol: PSPTO210
gene_biotype: protein_coding
description:
  Putative glyceraldehyde 3-phosphatedehydrogenase; Predicted by orpheus program; predicted by glimmer program; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: PBPRA1725
symbol: ECS2349
gene_biotype: protein_coding
description:
  Hypothetical molecular chaperone; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.


ensembl_gene_id: PBPRA1726
symbol: T2462
gene_biotype: protein_coding
description:
  Putative maltodextrin glucosidase; Predicted by orpheus program; predicted by glimmer program; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: PBPRA1729
symbol: C4444
gene_biotype: protein_coding
description:
  Putative 2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.


ensembl_gene_id: PBPRA1730
symbol: VVA0305
gene_biotype: protein_coding
description:
  Putative threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family.


ensembl_gene_id: PBPRA1738
symbol: SF0323
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the UPF0178 family.


ensembl_gene_id: PBPRA1743
symbol: VV20716
gene_biotype: protein_coding
description:
  Hypothetical CheY-like receiver protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1747
symbol: T1700
gene_biotype: protein_coding
description:
  Putative ROK family protein; Catalyzes the phosphorylation of N-acetyl-D-glucosamine (GlcNAc) derived from cell-wall degradation, yielding GlcNAc-6-P.


ensembl_gene_id: PBPRA1748
symbol: RHLE
gene_biotype: protein_coding
description:
  Putative ATP-dependent RNA helicase, DEAD boxfamily; Predicted by orpheus program; predicted by glimmer program; Belongs to the DEAD box helicase family.


ensembl_gene_id: PBPRA1750
symbol: PBPRA1750
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: PBPRA1751
symbol: STM1349
gene_biotype: protein_coding
description:
  Putative phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: PBPRA1753
symbol: VPA0938
gene_biotype: protein_coding
description:
  Hypothetical AraC-family transcriptionalregulatory protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1760
symbol: Y1767
gene_biotype: protein_coding
description:
  Putative PTS system, glucose-specific IIBCcomponent; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1763
symbol: S0992
gene_biotype: protein_coding
description:
  Putative nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.


ensembl_gene_id: PBPRA1767
symbol: S1011
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: PBPRA1768
symbol: YPO1416
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Contributes to the efficiency of the cell division process by stabilizing the polymeric form of the cell division protein FtsZ. Acts by promoting interactions between FtsZ protofilaments and suppressing the GTPase activity of FtsZ.


ensembl_gene_id: PBPRA1769
symbol: C1084
gene_biotype: protein_coding
description:
  Hypothetical N6-adenine-specific DNA methylase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family.


ensembl_gene_id: PBPRA1773
symbol: SO1856
gene_biotype: protein_coding
description:
  Putative 3-hydroxydecanoyl-(acyl-carrier-protein) dehydratase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length.


ensembl_gene_id: PBPRA1774
symbol: YCBZ
gene_biotype: protein_coding
description:
  Hypothetical ATP-dependent protease LA-related protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1775
symbol: VV1664
gene_biotype: protein_coding
description:
  Putative dehydrogenase; Required for spatial organization of the terminus region of the chromosome (Ter macrodomain) during the cell cycle. Prevents early segregation of duplicated Ter macrodomains during cell division. Binds specifically to matS, which is a 13 bp signature motif repeated within the Ter macrodomain.


ensembl_gene_id: PBPRA1789
symbol: BC2005
gene_biotype: protein_coding
description:
  Hypothetical GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: PBPRA1802
symbol: ECS5306
gene_biotype: protein_coding
description:
  Hypothetical Type I restriction enzyme EcoEIspecificity protein (S protein); Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1803
symbol: PP4741
gene_biotype: protein_coding
description:
  Putative type I restriction enzyme EcoEI Mprotein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1804
symbol: ECS5308
gene_biotype: protein_coding
description:
  Putative type I restriction enzyme R protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1815
symbol: VPA1266
gene_biotype: protein_coding
description:
  Putative ATP-dependent exoDNAse (exonuclease V), alpha subunit; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1829
symbol: FABG-9
gene_biotype: protein_coding
description:
  Hypothetical oxidoreductase, short chaindehydrogenase/reductase family; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1831
symbol: RSC1276
gene_biotype: protein_coding
description:
  Putative cytochrome c oxidase, subunit CcoN; Predicted by orpheus program; predicted by glimmer program; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: PBPRA1832
symbol: PP4251
gene_biotype: protein_coding
description:
  Putative Cbb3-type cytochrome oxidase, cytochrome c subunit; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1833
symbol: CCOQ-1
gene_biotype: protein_coding
description:
  Putative cytochrome c oxidase, subunit CcoQ; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1834
symbol: PSPTO200
gene_biotype: protein_coding
description:
  Putative cytochrome c oxidase, subunit CcoP; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.


ensembl_gene_id: PBPRA1836
symbol: PSPTO199
gene_biotype: protein_coding
description:
  Putative cation transport ATPase, E1-E2 family; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1838
symbol: PLU2179
gene_biotype: protein_coding
description:
  Putative fumarate and nitrate reductionregulatory protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1839
symbol: VV12609
gene_biotype: protein_coding
description:
  Putative universal stress protein family; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1841
symbol: ECS1928
gene_biotype: protein_coding
description:
  Putative ATPase; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.


ensembl_gene_id: PBPRA1842
symbol: Y1175
gene_biotype: protein_coding
description:
  Putative D-alanyl-D-alanine carboxypeptidase; Predicted by orpheus program; predicted by glimmer program; Belongs to the peptidase S11 family.


ensembl_gene_id: PBPRA1843
symbol: YPO2310
gene_biotype: protein_coding
description:
  Putative thermostable carboxypeptidase 1; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.


ensembl_gene_id: PBPRA1848
symbol: S1209
gene_biotype: protein_coding
description:
  Putative peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.


ensembl_gene_id: PBPRA1852
symbol: T1694
gene_biotype: protein_coding
description:
  Putative spermidine/putrescine ABC transporter,ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.


ensembl_gene_id: PBPRA1853
symbol: ECS1570
gene_biotype: protein_coding
description:
  Putative spermidine/putrescine ABC transporter, permease protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1855
symbol: VV12600
gene_biotype: protein_coding
description:
  Putative spermidine/putrescine-binding periplasmic protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.


ensembl_gene_id: PBPRA1856
symbol: Z1762
gene_biotype: protein_coding
description:
  Putative permidine/putrescine ABC transporter,periplasmic spermidine/putrescine-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.


ensembl_gene_id: PBPRA1859
symbol: VV1691
gene_biotype: protein_coding
description:
  Putative NAD-dependent protein deacetylase; Predicted by orpheus program; predicted by glimmer program; Belongs to the sirtuin family. Class III subfamily.


ensembl_gene_id: PBPRA1860
symbol: BPP1936
gene_biotype: protein_coding
description:
  Putative formate dehydrogenase, cytochrome B556subunit; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1861
symbol: RS01174
gene_biotype: protein_coding
description:
  Putative formate dehydrogenase, iron-sulfur subunit; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1862
symbol: CJ1511C
gene_biotype: protein_coding
description:
  Putative formate dehydrogenase largesubunit; Predicted by orpheus program; predicted by glimmer program; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: PBPRA1865
symbol: SO4506
gene_biotype: protein_coding
description:
  Hypothetical iron-sulfur cluster-binding protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1868
symbol: RS01179
gene_biotype: protein_coding
description:
  Putative formate dehydrogenase accessory protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.


ensembl_gene_id: PBPRA1870
symbol: PBPRA1870
gene_biotype: protein_coding
description:
  Hypothetical oxidoreductase, short-chain dehydrogenase/reductase family; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1875
symbol: YPO1176
gene_biotype: protein_coding
description:
  Hypothetical D-alanyl-D-alanine endopeptidase; Predicted by orpheus program; predicted by glimmer program; Belongs to the peptidase S11 family.


ensembl_gene_id: PBPRA1883
symbol: DNIR
gene_biotype: protein_coding
description:
  Hypothetical membrane-bound lytic murein transglycosylase D; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1886
symbol: VPA1184
gene_biotype: protein_coding
description:
  Hypothetical drug transport transmembrane protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1888
symbol: RB11186
gene_biotype: protein_coding
description:
  Putative sigma-54 dependent response regulator; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1889
symbol: BP1480
gene_biotype: protein_coding
description:
  Hypothetical extracellular tungstate binding protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1890
symbol: RSC2631
gene_biotype: protein_coding
description:
  Putative ABC transporter, permease protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1891
symbol: RSC2632
gene_biotype: protein_coding
description:
  Putative ABC-type cobalt transport system, ATPase component; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1892
symbol: MOBAB
gene_biotype: protein_coding
description:
  Putative molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.


ensembl_gene_id: PBPRA1893
symbol: SO4723
gene_biotype: protein_coding
description:
  Putative molybdopterin biosynthesis MoeAprotein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: PBPRA1895
symbol: RSC2497
gene_biotype: protein_coding
description:
  Hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: PBPRA1896
symbol: VPA0331
gene_biotype: protein_coding
description:
  Hypothetical transcription regulator protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1901
symbol: VVA1152
gene_biotype: protein_coding
description:
  Hypothetical oxidoreductase, Gfo/Idh/MocA family; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1902
symbol: VVA0266
gene_biotype: protein_coding
description:
  Hypothetical phosphatidylglycerophosphatase B; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1915
symbol: S2387
gene_biotype: protein_coding
description:
  Putative elongation factor P family protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the elongation factor P family.


ensembl_gene_id: PBPRA1922
symbol: proQ
gene_biotype: protein_coding
description:
  Putative activator of ProP osmoprotectant transporter; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family.


ensembl_gene_id: PBPRA1925
symbol: PBPRA1925
gene_biotype: protein_coding
description:
  Hypothetical Uncharacterized paraquat-inducible protein A; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1926
symbol: YEBT
gene_biotype: protein_coding
description:
  Hypothetical paraquat-inducible protein B; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1927
symbol: YEBU_1
gene_biotype: protein_coding
description:
  Putative sun/nucleolar protein family protein; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA.


ensembl_gene_id: PBPRA1930
symbol: SMB21293
gene_biotype: protein_coding
description:
  Putative guanine aminohydrolase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.


ensembl_gene_id: PBPRA1934
symbol: BETT
gene_biotype: protein_coding
description:
  Putative transporter, BCCT family (BetT, Choline-glycine betaine transporter); Predicted by orpheus program; predicted by glimmer program; Belongs to the BCCT transporter (TC 2.A.15) family.


ensembl_gene_id: PBPRA1936
symbol: SCO0636
gene_biotype: protein_coding
description:
  Hypothetical ATP-binding component of ABC transporter; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1940
symbol: RB0790
gene_biotype: protein_coding
description:
  Hypothetical CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1949
symbol: HD1057
gene_biotype: protein_coding
description:
  Hypothetical pseudouridylate synthase; Predicted by orpheus program; predicted by glimmer program; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: PBPRA1951
symbol: VP0394
gene_biotype: protein_coding
description:
  Putative haemagglutinin associated protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1958
symbol: ACPD
gene_biotype: protein_coding
description:
  Putative acyl carrier protein phosphodiesterase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.


ensembl_gene_id: PBPRA1961
symbol: PLU2843
gene_biotype: protein_coding
description:
  Putative alpha helix protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the UPF0265 family.


ensembl_gene_id: PBPRA1964
symbol: ddl
gene_biotype: protein_coding
description:
  Hypothetical D-alanine-D-alanine ligase B; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: PBPRA1967
symbol: PSPTO447
gene_biotype: protein_coding
description:
  Putative carboxymuconolactone decarboxylase family protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1989
symbol: BZDV
gene_biotype: protein_coding
description:
  Hypothetical NADPH-dependent glutamate synthase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA1994
symbol: EF2577
gene_biotype: protein_coding
description:
  Putative carbamoyl transferase; Predicted by orpheus program; predicted by glimmer program; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.


ensembl_gene_id: PBPRA1997
symbol: STM1566
gene_biotype: protein_coding
description:
  Putative malate oxidoreductase; Predicted by orpheus program; predicted by glimmer program; Belongs to the malic enzymes family.


ensembl_gene_id: PBPRA2001
symbol: VVA0906
gene_biotype: protein_coding
description:
  Putative 3-oxoacyl-(acyl-carrier-protein) synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: PBPRA2002
symbol: XAC4365
gene_biotype: protein_coding
description:
  Hypothetical transmembrane transportprotein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2003
symbol: VPA1449-2
gene_biotype: protein_coding
description:
  Hypothetical Methyl-accepting chemotaxis protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2007
symbol: T4608
gene_biotype: protein_coding
description:
  Hypothetical pyruvate formate lyase activating enzyme; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2010
symbol: C0912
gene_biotype: protein_coding
description:
  Putative molybdopterin biosynthesis protein MoeA; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: PBPRA2014
symbol: Y2026
gene_biotype: protein_coding
description:
  Hypothetical oligopeptide ABC transporter, periplasmic oligopeptide-binding protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2015
symbol: SO1868
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the CvfB family.


ensembl_gene_id: PBPRA2018
symbol: VP1981
gene_biotype: protein_coding
description:
  Hypothetical methyl-accepting chemotaxisprotein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2020
symbol: selO
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation).


ensembl_gene_id: PBPRA2023
symbol: VC1507
gene_biotype: protein_coding
description:
  Putative 3-deoxy-D-arabinoheptulosonate-7-phosphate (DAHP)synthetase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).


ensembl_gene_id: PBPRA2024
symbol: VV1636
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the UPF0234 family.


ensembl_gene_id: PBPRA2025
symbol: SO3716
gene_biotype: protein_coding
description:
  Hypothetical DnaJ-class molecular chaperone with C-terminal Zn finger domain; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2027
symbol: T0457
gene_biotype: protein_coding
description:
  Putative lipid A biosynthesis lauroylacyltransferase; Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)-(lauroyl)-lipid IV(A).


ensembl_gene_id: PBPRA2028
symbol: BLR7040
gene_biotype: protein_coding
description:
  Putative cytochrome c-type protein NapC; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2029
symbol: AGR_L_91
gene_biotype: protein_coding
description:
  Hypothetical periplasmic nitrate reductase small subunit precursor; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.


ensembl_gene_id: PBPRA2035
symbol: RB5755
gene_biotype: protein_coding
description:
  Putative DnaK-related protein (Molecular chaperone); Predicted by orpheus program; predicted by glimmer program; Belongs to the heat shock protein 70 family.


ensembl_gene_id: PBPRA2038
symbol: XAC1547
gene_biotype: protein_coding
description:
  Hypothetical ABC transporter ATP-binding protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2039
symbol: EF1676
gene_biotype: protein_coding
description:
  Hypothetical transcriptional regulator,GntR family; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2046
symbol: PBPRA2046
gene_biotype: protein_coding
description:
  Hypothetical ribonuclease; Predicted by orpheus program; predicted by glimmer program; Belongs to the RNase T2 family.


ensembl_gene_id: PBPRA2047
symbol: R01933-2
gene_biotype: protein_coding
description:
  Putative sodium:alanine symporter family protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2051
symbol: YPO3831-2
gene_biotype: protein_coding
description:
  Putative homoserine/homoserine lactoneefflux protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2052
symbol: PTS-EIIB
gene_biotype: protein_coding
description:
  Hypothetical PTS system, cellobiose-specific IIB component; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2055
symbol: VVA0192
gene_biotype: protein_coding
description:
  Putative PTS system, fructose-specific IIABC component; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2061
symbol: def
gene_biotype: protein_coding
description:
  Hypothetical polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: PBPRA2062
symbol: STY0706
gene_biotype: protein_coding
description:
  Putstive inosine-uridine preferring nucleoside hydrolase family protein; Hydrolyzes cytidine or uridine to ribose and cytosine or uracil, respectively.


ensembl_gene_id: PBPRA2067
symbol: STY2946
gene_biotype: protein_coding
description:
  Hypothetical phosphatase/phosphohexomutase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2073
symbol: PM0123
gene_biotype: protein_coding
description:
  Putative arginine ABC transporter, ATP-bindingprotein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2074
symbol: C0996
gene_biotype: protein_coding
description:
  Putative ABC-type amino acid transport/signaltransduction system; Predicted by orpheus program; predicted by glimmer program; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: PBPRA2075
symbol: STY0922
gene_biotype: protein_coding
description:
  Putative arginine ABC transporter, permease protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2078
symbol: C3434
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, LacI family; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2080
symbol: GALK
gene_biotype: protein_coding
description:
  Putative galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.


ensembl_gene_id: PBPRA2081
symbol: ECS0786
gene_biotype: protein_coding
description:
  Putative galactose-1-phosphate uridylyltransferase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2082
symbol: GALE
gene_biotype: protein_coding
description:
  UDP-glucose 4-epimerase; Predicted by orpheus program; predicted by glimmer program; Belongs to the NAD(P)-dependent epimerase/dehydratase family.


ensembl_gene_id: PBPRA2084
symbol: S3323
gene_biotype: protein_coding
description:
  Putative evolved beta-D-galactosidase, alpha subunit; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2085
symbol: EBGC
gene_biotype: protein_coding
description:
  Putative evolved beta-D-galactosidase, beta subunit; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2089
symbol: HD1707
gene_biotype: protein_coding
description:
  Putative sodium/glutamate symporter; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family.


ensembl_gene_id: PBPRA2102
symbol: Y0547
gene_biotype: protein_coding
description:
  Putative coproporphyrinogen III oxidase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2105
symbol: EXBD1
gene_biotype: protein_coding
description:
  Putative ExbD, Biopolymer transport protein ExbD/TolR; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2106
symbol: HMUT
gene_biotype: protein_coding
description:
  Hypothetical hemin ABC transporter, periplasmichemin-binding protein HutB; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2107
symbol: HMUU
gene_biotype: protein_coding
description:
  Putative hemin ABC transporter, permease protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: PBPRA2108
symbol: PHUV
gene_biotype: protein_coding
description:
  Hypothetical hemin ABC transporter, ATP-binding protein HutD; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.


ensembl_gene_id: PBPRA2109
symbol: PLU2605
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, LacI family; Is the main repressor of the genes involved in the de novo synthesis of purine nucleotides, regulating purB, purC, purEK, purF, purHD, purL, purMN and guaBA expression. PurR is allosterically activated to bind its cognate DNA by binding the purine corepressors, hypoxanthine or guanine, thereby effecting transcription repression.


ensembl_gene_id: PBPRA2112
symbol: ECS2459
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: PBPRA2113
symbol: PBPRA2113
gene_biotype: protein_coding
description:
  Hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.


ensembl_gene_id: PBPRA2114
symbol: ECS2460
gene_biotype: protein_coding
description:
  Putative ABC transporter, periplasmic substrate-binding protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2115
symbol: SMC02588
gene_biotype: protein_coding
description:
  Hypohetical ABC transporter, permeaseprotein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2116
symbol: SMC02587
gene_biotype: protein_coding
description:
  Putative ABC-type uncharacterized transport system ATPase component; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2117
symbol: SMC02134
gene_biotype: protein_coding
description:
  Putative phosphatidylglycerophosphate synthase; Predicted by orpheus program; predicted by glimmer program; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: PBPRA2118
symbol: PBPRA2118
gene_biotype: protein_coding
description:
  Putative alcohol dehydrogenase, zinc-containing; Predicted by orpheus program; predicted by glimmer program; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.


ensembl_gene_id: PBPRA2122
symbol: VV3248
gene_biotype: protein_coding
description:
  Putative cyclohexadienyl dehydratase precursor signal peptide protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: PBPRA2126
symbol: PBPRA2126
gene_biotype: protein_coding
description:
  Hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: PBPRA2129
symbol: SO3279
gene_biotype: protein_coding
description:
  Hypothetical AcrB/AcrD/AcrF family protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: PBPRA2136
symbol: HIP
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria; Belongs to the high-potential iron-sulfur protein (HiPIP) family.


ensembl_gene_id: PBPRA2137
symbol: T0747
gene_biotype: protein_coding
description:
  Putative heat shock protein 70 family protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2140
symbol: PBPRA2140
gene_biotype: protein_coding
description:
  Hypothetical major outer membrane protein OmpU; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2142
symbol: PA5497
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: PBPRA2148
symbol: BH3313
gene_biotype: protein_coding
description:
  Putative PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2151
symbol: SF1522
gene_biotype: protein_coding
description:
  Hypothetical vitamin B12 ABC transporter, ATP-binding protein BtuD; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system.


ensembl_gene_id: PBPRA2152
symbol: SF1520
gene_biotype: protein_coding
description:
  Putative vitamin B12 ABC transporter, permease protein BtuC; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Involved in the translocation of the substrate across the membrane.


ensembl_gene_id: PBPRA2153
symbol: SO2338
gene_biotype: protein_coding
description:
  Hypothetical succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily.


ensembl_gene_id: PBPRA2154
symbol: IHFA
gene_biotype: protein_coding
description:
  Putative integration host factor, alpha subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: PBPRA2155
symbol: pheT
gene_biotype: protein_coding
description:
  Putative phenylalanyl-tRNA synthetase, beta chain; Predicted by orpheus program; predicted by glimmer program; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: PBPRA2156
symbol: pheS
gene_biotype: protein_coding
description:
  Putative phenylalanyl-tRNA synthetase, alpha chain; Predicted by orpheus program; predicted by glimmer program; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: PBPRA2157
symbol: rplT
gene_biotype: protein_coding
description:
  Putative large subunit ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: PBPRA2158
symbol: VV12398
gene_biotype: protein_coding
description:
  Putative initiation factor IF3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: PBPRA2161
symbol: PLU2669-2
gene_biotype: protein_coding
description:
  Putative threonyl-tRNA synthetase; Predicted by orpheus program; predicted by glimmer program; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: PBPRA2168
symbol: PBPRA2168
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the UPF0267 family.


ensembl_gene_id: PBPRA2169
symbol: SO0096
gene_biotype: protein_coding
description:
  Putative histidine utilization repressor; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2170
symbol: CV0321
gene_biotype: protein_coding
description:
  Putative imidazolonepropionase; Predicted by orpheus program; predicted by glimmer program; Belongs to the metallo-dependent hydrolases superfamily. HutI family.


ensembl_gene_id: PBPRA2171
symbol: hutG
gene_biotype: protein_coding
description:
  Hypothetical formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.


ensembl_gene_id: PBPRA2173
symbol: CV0325
gene_biotype: protein_coding
description:
  Putative histidine ammonia-lyase; Predicted by orpheus program; predicted by glimmer program; Belongs to the PAL/histidase family.


ensembl_gene_id: PBPRA2174
symbol: SF1505
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the fructosamine kinase family.


ensembl_gene_id: PBPRA2176
symbol: RIBE
gene_biotype: protein_coding
description:
  Putative riboflavin synthase, alpha chain; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2178
symbol: SMB20219
gene_biotype: protein_coding
description:
  Hypothetical DNA-binding response regulator OmpR; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2180
symbol: YPO2392
gene_biotype: protein_coding
description:
  Putative multidrug resistance protein NorM(Na+/drug antiporter); Multidrug efflux pump that functions as a Na(+)/drug antiporter; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.


ensembl_gene_id: PBPRA2185
symbol: R01478
gene_biotype: protein_coding
description:
  Putative amino acid ABC transporter, periplasmic amino acid-binding protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2187
symbol: C4036
gene_biotype: protein_coding
description:
  Putative ABC-type amino acid transport system, permease component; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2190
symbol: T1834
gene_biotype: protein_coding
description:
  Putative carrier/transport protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the BI1 family.


ensembl_gene_id: PBPRA2194
symbol: Y2725
gene_biotype: protein_coding
description:
  Putative SAM-dependent methyltransferase; Specifically methylates the cytosine at position 1962 (m5C1962) of 23S rRNA.


ensembl_gene_id: PBPRA2196
symbol: SO3571
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the UPF0319 family.


ensembl_gene_id: PBPRA2199
symbol: CHIA
gene_biotype: protein_coding
description:
  Hypothetical protein with chitinase domain; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2203
symbol: PBPRA2203
gene_biotype: protein_coding
description:
  Hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: PBPRA2208
symbol: PRO1577
gene_biotype: protein_coding
description:
  Putative glyceraldehyde 3-phosphate dehydrogenase; Predicted by orpheus program; predicted by glimmer program; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: PBPRA2210
symbol: PBPRA2210
gene_biotype: protein_coding
description:
  Hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: PBPRA2223
symbol: PBPRA2223
gene_biotype: protein_coding
description:
  Hypothetical L-lactate permease (lctP); Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: PBPRA2224
symbol: PLU2848
gene_biotype: protein_coding
description:
  Putative D-lactate dehydrogenase, FAD protein, NADH independent; Catalyzes the oxidation of D-lactate to pyruvate. Belongs to the quinone-dependent D-lactate dehydrogenase family.


ensembl_gene_id: PBPRA2228
symbol: BP0731
gene_biotype: protein_coding
description:
  Putative carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily.


ensembl_gene_id: PBPRA2230
symbol: VP1942
gene_biotype: protein_coding
description:
  Putative diaminobutyrate-pyruvate transaminase & L-2,4-diaminobutyrate decarboxylase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2236
symbol: PLU2026
gene_biotype: protein_coding
description:
  Putative CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; Predicted by orpheus program; predicted by glimmer program; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: PBPRA2237
symbol: PLU2027
gene_biotype: protein_coding
description:
  Putative excinuclease ABC, subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: PBPRA2238
symbol: Y2443
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, LuxR family; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2240
symbol: ABC-NBD
gene_biotype: protein_coding
description:
  Putative ABC transporter, ATP-binding protein; Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system (By similarity).


ensembl_gene_id: PBPRA2241
symbol: YDCF
gene_biotype: protein_coding
description:
  Putative ABC transporter, membrane-spanning permease; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2242
symbol: RA0906
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, GntR family; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2243
symbol: SMB21011
gene_biotype: protein_coding
description:
  Putative xanthine dehydrogenase, XdhA subunit; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2244
symbol: AGR_C_42
gene_biotype: protein_coding
description:
  Putative xanthine dehydrogenase, XdhB subunit; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2245
symbol: XDHC
gene_biotype: protein_coding
description:
  Hypothetical xanthine dehydrogenase accessory factor XdhC; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2250
symbol: PBPRA2250
gene_biotype: protein_coding
description:
  Hypothetical replication initiation protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2251
symbol: PBPRA2251
gene_biotype: protein_coding
description:
  Hypothetical ABC transporter, periplasmic solute-binding protein, family 5; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2252
symbol: R02255
gene_biotype: protein_coding
description:
  Hypothetical ABC transporter, permease protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2254
symbol: RA1026
gene_biotype: protein_coding
description:
  Hypothetical oligopeptide transport ATP-binding protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the ABC transporter superfamily.


ensembl_gene_id: PBPRA2255
symbol: lamB
gene_biotype: protein_coding
description:
  Hypothetical maltoporin; Involved in the transport of maltose and maltodextrins. Belongs to the porin LamB (TC 1.B.3) family.


ensembl_gene_id: PBPRA2256
symbol: VPA1643
gene_biotype: protein_coding
description:
  Hypothetical maltose operon periplasmic protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2259
symbol: ATU2314
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, membrane protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2260
symbol: allA
gene_biotype: protein_coding
description:
  Putative ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source.


ensembl_gene_id: PBPRA2261
symbol: RB0787
gene_biotype: protein_coding
description:
  Putative allantoicase; Predicted by orpheus program; predicted by glimmer program; Belongs to the allantoicase family.


ensembl_gene_id: PBPRA2263
symbol: RB1169
gene_biotype: protein_coding
description:
  Putative polysaccharide deacetylase family protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2264
symbol: AGR_C_42-2
gene_biotype: protein_coding
description:
  Putative transthyretin family protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.


ensembl_gene_id: PBPRA2267
symbol: SCO6213
gene_biotype: protein_coding
description:
  Putative hydroxydechloroatrazine ethylaminohydrolase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2269
symbol: VV1288
gene_biotype: protein_coding
description:
  Hypothetical esterase of the alpha-beta hydrolase superfamily; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2274
symbol: Z0662
gene_biotype: protein_coding
description:
  Putative hydroxypyruvate isomerase; Predicted by orpheus program; predicted by glimmer program; Belongs to the hyi family.


ensembl_gene_id: PBPRA2275
symbol: BLR3166
gene_biotype: protein_coding
description:
  Putative glyoxylate carboligase; Predicted by orpheus program; predicted by glimmer program; Belongs to the TPP enzyme family.


ensembl_gene_id: PBPRA2279
symbol: SMB20297
gene_biotype: protein_coding
description:
  Putative TRAP-type C4-dicarboxylate transport system, large permease component; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2280
symbol: VC1778
gene_biotype: protein_coding
description:
  Putative TRAP-type C4-dicarboxylate transport system, small permease component; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2281
symbol: SMB20295
gene_biotype: protein_coding
description:
  Putative TRAP-type C4-dicarboxylate transport system, periplasmic component; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2283
symbol: SA0303
gene_biotype: protein_coding
description:
  Putative sodium/glucose cotransporter; Predicted by orpheus program; predicted by glimmer program; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: PBPRA2285
symbol: HD1852
gene_biotype: protein_coding
description:
  Putative N-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).


ensembl_gene_id: PBPRA2286
symbol: TTE2419
gene_biotype: protein_coding
description:
  Putative rpiR-family transcriptional regulatory protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2288
symbol: PBPRA2288
gene_biotype: protein_coding
description:
  Hypothetical ToxR-regulated lipoprotein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2293
symbol: STY0671
gene_biotype: protein_coding
description:
  Putative citrate lyase, beta subunit; Predicted by orpheus program; predicted by glimmer program; Belongs to the HpcH/HpaI aldolase family.


ensembl_gene_id: PBPRA2295
symbol: STM0624
gene_biotype: protein_coding
description:
  Hypothetical citrate (pro-3S)-lyase ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.


ensembl_gene_id: PBPRA2298
symbol: T3267
gene_biotype: protein_coding
description:
  Putative oxaloacetate decarboxylase, alpha subunit; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2299
symbol: T3266
gene_biotype: protein_coding
description:
  Putative oxaloacetate decarboxylase, beta subunit; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the GcdB/MmdB/OadB family.


ensembl_gene_id: PBPRA2301
symbol: STY0675
gene_biotype: protein_coding
description:
  Putative transcriptional regulator CitB; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2303
symbol: PBPRA2303
gene_biotype: protein_coding
description:
  Hypothetical hemolysin secretion protein HylB; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2307
symbol: ATU2337
gene_biotype: protein_coding
description:
  Putative permease of the drug/metabolite transporter (DMT) superfamily; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2312
symbol: Z1014
gene_biotype: protein_coding
description:
  Putative ABC-type multidrug transport system, ATPase component; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2318
symbol: Y3759
gene_biotype: protein_coding
description:
  Hypothetical transporter, AcrB/D/F family; Predicted by orpheus program; predicted by glimmer program; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: PBPRA2320
symbol: SO0701
gene_biotype: protein_coding
description:
  Hypothetical transcriptional regulator protein, LysR family; Predicted by orpheus program; predicted by glimmer program; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: PBPRA2322
symbol: PLU2681
gene_biotype: protein_coding
description:
  Putative heat shock protein HtpX; Predicted by orpheus program; predicted by glimmer program; Belongs to the peptidase M48B family.


ensembl_gene_id: PBPRA2326
symbol: BIOD
gene_biotype: protein_coding
description:
  Putative dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: PBPRA2327
symbol: Z0996
gene_biotype: protein_coding
description:
  Putative biotin synthesis protein BioC; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway.


ensembl_gene_id: PBPRA2328
symbol: Z0995
gene_biotype: protein_coding
description:
  Putative 8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.


ensembl_gene_id: PBPRA2329
symbol: T2093
gene_biotype: protein_coding
description:
  Putative biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: PBPRA2330
symbol: Z0993
gene_biotype: protein_coding
description:
  Putative adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.


ensembl_gene_id: PBPRA2331
symbol: VP2360
gene_biotype: protein_coding
description:
  Hypothetical ATP-dependent protease La (LON) domain protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2332
symbol: MLC
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, ROK family; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2333
symbol: STY3080
gene_biotype: protein_coding
description:
  Putative organic radical activating enzymes; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: PBPRA2336
symbol: GLTP-2
gene_biotype: protein_coding
description:
  Hypothetical Na+/H+-dicarboxylate symporter; Predicted by orpheus program; predicted by glimmer program; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: PBPRA2337
symbol: THIM
gene_biotype: protein_coding
description:
  Putative hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: PBPRA2339
symbol: RS04419
gene_biotype: protein_coding
description:
  Hypothetical enoyl-CoA hydratase/isomerase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2345
symbol: UHPC
gene_biotype: protein_coding
description:
  Putative UhpC, sugar phosphate permease; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2346
symbol: UHPB
gene_biotype: protein_coding
description:
  Putative UhpB, Signal transduction histidine kinase, glucose-6-phosphate specific; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2347
symbol: YPO1576
gene_biotype: protein_coding
description:
  Two-component system, NarL family, uhpT operon response regulator UhpA; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2349
symbol: Y2761
gene_biotype: protein_coding
description:
  Hypothetical glyoxylase II family protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2352
symbol: BP2216
gene_biotype: protein_coding
description:
  Putative transcription regulator, MarR family; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2355
symbol: Z5926
gene_biotype: protein_coding
description:
  Hypothetical transcriptional regulator LYSR-type; Predicted by orpheus program; predicted by glimmer program; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: PBPRA2357
symbol: NMA0722
gene_biotype: protein_coding
description:
  Putative L-lactate permease, LctP; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: PBPRA2359
symbol: HD1220
gene_biotype: protein_coding
description:
  Putative electron transport protein ykgF; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2369
symbol: BLR6054-3
gene_biotype: protein_coding
description:
  Hypothetical transposase and inactivated derivatives; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2372
symbol: SO2874-7
gene_biotype: protein_coding
description:
  Putative transposase and inactivated derivative; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2376
symbol: PBPRA2376
gene_biotype: protein_coding
description:
  Putative cell division protein MukB; Predicted by orpheus program; predicted by glimmer program; Belongs to the SMC family. MukB subfamily.


ensembl_gene_id: PBPRA2377
symbol: mukE
gene_biotype: protein_coding
description:
  Putative mukE protein; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF.


ensembl_gene_id: PBPRA2378
symbol: PBPRA2378
gene_biotype: protein_coding
description:
  Putative MukF protein; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity.


ensembl_gene_id: PBPRA2379
symbol: SMTA
gene_biotype: protein_coding
description:
  Putative SmtA protein; Catalyzes the methylation of 5-carboxymethoxyuridine (cmo5U) to form 5-methoxycarbonylmethoxyuridine (mcmo5U) at position 34 in tRNAs; Belongs to the class I-like SAM-binding methyltransferase superfamily. CmoM family.


ensembl_gene_id: PBPRA2381
symbol: ECS2435
gene_biotype: protein_coding
description:
  Putative sodium/dicarboxylate symporter; Predicted by orpheus program; predicted by glimmer program; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: PBPRA2382
symbol: KDSB
gene_biotype: protein_coding
description:
  Putative 3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: PBPRA2383
symbol: NE2164
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the UPF0434 family.


ensembl_gene_id: PBPRA2384
symbol: YCAH
gene_biotype: protein_coding
description:
  Putative tetraacyldisaccharide 4`-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: PBPRA2385
symbol: STY0985
gene_biotype: protein_coding
description:
  Putative transport ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.


ensembl_gene_id: PBPRA2388
symbol: YCFW
gene_biotype: protein_coding
description:
  Putative ABC transporter, integral membrane protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2389
symbol: STY1258
gene_biotype: protein_coding
description:
  Putative ABC transporter ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.


ensembl_gene_id: PBPRA2390
symbol: PLU2814
gene_biotype: protein_coding
description:
  Putative ABC transporter integral membrane subunit; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2392
symbol: ECS1492
gene_biotype: protein_coding
description:
  Putative transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: PBPRA2394
symbol: BB1022
gene_biotype: protein_coding
description:
  Hypothetical ribosomal-protein-serine acetyltransferase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2397
symbol: PBPRA2397
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the UPF0227 family.


ensembl_gene_id: PBPRA2403
symbol: Y1770
gene_biotype: protein_coding
description:
  Putative Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2405
symbol: CV4330
gene_biotype: protein_coding
description:
  Putative dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.


ensembl_gene_id: PBPRA2406
symbol: Y3759-2
gene_biotype: protein_coding
description:
  Putative AcrB, Cation/multidrug efflux pump; Predicted by orpheus program; predicted by glimmer program; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: PBPRA2407
symbol: VV12875
gene_biotype: protein_coding
description:
  Hypothetical periplasmic linker protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: PBPRA2409
symbol: RS03529
gene_biotype: protein_coding
description:
  Putative fumarate hydratase, class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.


ensembl_gene_id: PBPRA2410
symbol: ECS2521
gene_biotype: protein_coding
description:
  Putative para-aminobenzoate synthase, component I; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2413
symbol: T1051
gene_biotype: protein_coding
description:
  Putative L-serine dehydratase 1; Predicted by orpheus program; predicted by glimmer program; Belongs to the iron-sulfur dependent L-serine dehydratase family.


ensembl_gene_id: PBPRA2417
symbol: Z1078
gene_biotype: protein_coding
description:
  Hypothetical NADPH-flavin oxidoreductase; Predicted by orpheus program; predicted by glimmer program; Belongs to the flavin oxidoreductase frp family.


ensembl_gene_id: PBPRA2418
symbol: CT0951
gene_biotype: protein_coding
description:
  Putative iron-containing alcohol dehydrogenase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2421
symbol: T1689
gene_biotype: protein_coding
description:
  Putative transcriptional regulatory protein PhoP; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2423
symbol: PD1032
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon- carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP); Belongs to the TER reductase family.


ensembl_gene_id: PBPRA2424
symbol: PP1893
gene_biotype: protein_coding
description:
  Putative oxidoreductase, acyl-CoA dehydrogenase family; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2429
symbol: Y2617
gene_biotype: protein_coding
description:
  Hypothetical enzyme of sugar metabolism; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2431
symbol: PYKA
gene_biotype: protein_coding
description:
  Putative pyruvate kinase II; Predicted by orpheus program; predicted by glimmer program; Belongs to the pyruvate kinase family.


ensembl_gene_id: PBPRA2432
symbol: Y2271
gene_biotype: protein_coding
description:
  Hypothetical ribosomal-protein-alanine acetyltransferase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2433
symbol: BH1021
gene_biotype: protein_coding
description:
  Hypothetical 6-O-methylguanine-DNA methyltransferase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2434
symbol: TYRR
gene_biotype: protein_coding
description:
  Hypothetical transcriptional regulator TyrR; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2440
symbol: YPO2352
gene_biotype: protein_coding
description:
  Putative psp operon transcriptional activator; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2441
symbol: SF1299
gene_biotype: protein_coding
description:
  Hypothetical peptide ABC transporter, periplasmic peptide-binding protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2445
symbol: ECS1867
gene_biotype: protein_coding
description:
  Putative ABC-type antimicrobial peptide transport system, ATPase component; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2446
symbol: pyrF
gene_biotype: protein_coding
description:
  Putative orotidine 5-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: PBPRA2447
symbol: SF1284
gene_biotype: protein_coding
description:
  Putative N-acetylglucosaminyl transferase; Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane; Belongs to the LapB family.


ensembl_gene_id: PBPRA2448
symbol: YCIS
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS). Belongs to the LapA family.


ensembl_gene_id: PBPRA2449
symbol: IHFB
gene_biotype: protein_coding
description:
  Putative integration host factor, beta subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: PBPRA2450
symbol: RPSA
gene_biotype: protein_coding
description:
  Putative ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.


ensembl_gene_id: PBPRA2452
symbol: S0967
gene_biotype: protein_coding
description:
  Putative 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: PBPRA2455
symbol: serC
gene_biotype: protein_coding
description:
  Putative phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.


ensembl_gene_id: PBPRA2456
symbol: GYRA
gene_biotype: protein_coding
description:
  Putative DNA topoisomerase (ATP-hydrolyzing); A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP- [...]


ensembl_gene_id: PBPRA2457
symbol: ubiG
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis O-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.


ensembl_gene_id: PBPRA2458
symbol: CBBZ
gene_biotype: protein_coding
description:
  Hypothetical phosphoglycolate phosphatase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2459
symbol: SF2316
gene_biotype: protein_coding
description:
  Putative ribonucleoside-diphosphate reductase,alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: PBPRA2460
symbol: NRDB
gene_biotype: protein_coding
description:
  Putative ribonucleoside-diphosphate reductase,beta subunit; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2464
symbol: ECS3137
gene_biotype: protein_coding
description:
  Hypothetical competence damage protein CinA; Predicted by orpheus program; predicted by glimmer program; Belongs to the CinA family.


ensembl_gene_id: PBPRA2470
symbol: STY1337
gene_biotype: protein_coding
description:
  Putative cys regulon transcriptional activator; Predicted by orpheus program; predicted by glimmer program; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: PBPRA2472
symbol: STY4809
gene_biotype: protein_coding
description:
  Putative tRNA-(MS[2]IO[6]A)-hydroxylase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2473
symbol: PP2327
gene_biotype: protein_coding
description:
  Hypothetical cys regulon transcriptional activator; Predicted by orpheus program; predicted by glimmer program; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: PBPRA2474
symbol: PBPRA2474
gene_biotype: protein_coding
description:
  Hypothetical metal-dependent amidase/aminoacylase/carboxypeptidase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2477
symbol: TOPA
gene_biotype: protein_coding
description:
  Putative DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing [...]


ensembl_gene_id: PBPRA2480
symbol: YPO2216
gene_biotype: protein_coding
description:
  Putative sohB protein, peptidase U7 family; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2481
symbol: YPO2215
gene_biotype: protein_coding
description:
  Putative oxidoreductase, short-chain dehydrogenase/reductase family; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2482
symbol: VV1227
gene_biotype: protein_coding
description:
  Putative pseudouridine synthase family 1 protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: PBPRA2483
symbol: Y2053
gene_biotype: protein_coding
description:
  Putative translation factor; Predicted by orpheus program; predicted by glimmer program; Belongs to the SUA5 family.


ensembl_gene_id: PBPRA2484
symbol: C1731
gene_biotype: protein_coding
description:
  Putative metal-dependent phosphoesterase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2485
symbol: TLL0358
gene_biotype: protein_coding
description:
  Hypothetical 3-Deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2486
symbol: T1635
gene_biotype: protein_coding
description:
  Putative anthranilate/para-aminobenzoate synthase component I, TrpE protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2487
symbol: S1352
gene_biotype: protein_coding
description:
  Putative anthranilate synthase component II; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2488
symbol: Z2548
gene_biotype: protein_coding
description:
  Putative anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: PBPRA2489
symbol: SF1265
gene_biotype: protein_coding
description:
  Putative phosphoribosylanthranilate isomerase(trpF); Predicted by orpheus program; predicted by glimmer program; Belongs to the TrpC family.


ensembl_gene_id: PBPRA2490
symbol: trpB
gene_biotype: protein_coding
description:
  Putative tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: PBPRA2491
symbol: PLU2467
gene_biotype: protein_coding
description:
  Putative tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: PBPRA2493
symbol: PBPRA2493
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: PBPRA2496
symbol: RCPA
gene_biotype: protein_coding
description:
  Hypothetical Flp pilus assembly protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the bacterial secretin family.


ensembl_gene_id: PBPRA2500
symbol: PM0848
gene_biotype: protein_coding
description:
  Hypothetical Flp pilus assembly protein TadB; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2501
symbol: TADC
gene_biotype: protein_coding
description:
  Hypothetical Flp pilus assembly protein TadC; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2505
symbol: PBPRA2505
gene_biotype: protein_coding
description:
  Conserved hypothetical outer membrane protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2506
symbol: VV1213
gene_biotype: protein_coding
description:
  Putative intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.


ensembl_gene_id: PBPRA2510
symbol: SO2919
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the methyltransferase superfamily.


ensembl_gene_id: PBPRA2511
symbol: NMB2018
gene_biotype: protein_coding
description:
  Putative pseudouridine synthase Rlu family protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2513
symbol: PLU2487
gene_biotype: protein_coding
description:
  Putative cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.


ensembl_gene_id: PBPRA2516
symbol: BETT-2
gene_biotype: protein_coding
description:
  Putative transporter, BCCT family; Predicted by orpheus program; predicted by glimmer program; Belongs to the BCCT transporter (TC 2.A.15) family.


ensembl_gene_id: PBPRA2517
symbol: SO2855
gene_biotype: protein_coding
description:
  Putative DNA polymerase III, epsilon subunit; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2523
symbol: Y3945
gene_biotype: protein_coding
description:
  Putative NAD(P)H-nitrite reductase, large subunit; Predicted by orpheus program; predicted by glimmer program; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: PBPRA2524
symbol: PP3999
gene_biotype: protein_coding
description:
  Putative uroporphyrin-III C-methyltransferase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2525
symbol: RB1111
gene_biotype: protein_coding
description:
  Hypothetical nitrate reductase large subunit; Predicted by orpheus program; predicted by glimmer program; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.


ensembl_gene_id: PBPRA2526
symbol: SSO2521
gene_biotype: protein_coding
description:
  Hypothetical protein similar to lipases; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2527
symbol: XCC0115
gene_biotype: protein_coding
description:
  Hypothetical uncharacterized paraquat-inducible protein B; Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon- carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP); Belongs to the TER reductase family.


ensembl_gene_id: PBPRA2532
symbol: tnaA
gene_biotype: protein_coding
description:
  Putative tryptophanase; Predicted by orpheus program; predicted by glimmer program; Belongs to the beta-eliminating lyase family.


ensembl_gene_id: PBPRA2533
symbol: MTR
gene_biotype: protein_coding
description:
  Putative tryptophan-specific transport protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2534
symbol: Z2648
gene_biotype: protein_coding
description:
  Putative pyridoxine kinase; Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP.


ensembl_gene_id: PBPRA2536
symbol: S0155
gene_biotype: protein_coding
description:
  Hypothetical deoxyguanosinetriphosphatetriphosphohydrolase; dGTPase preferentially hydrolyzes dGTP over the other canonical NTPs.


ensembl_gene_id: PBPRA2545
symbol: VV12178
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the UPF0149 family.


ensembl_gene_id: PBPRA2547
symbol: nadA
gene_biotype: protein_coding
description:
  Putative NadA, Quinolinate synthase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate; Belongs to the quinolinate synthase A family. Type 1 subfamily.


ensembl_gene_id: PBPRA2548
symbol: SO2746
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.


ensembl_gene_id: PBPRA2549
symbol: PAL
gene_biotype: protein_coding
description:
  Putative peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: PBPRA2550
symbol: VV2275
gene_biotype: protein_coding
description:
  Putative TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: PBPRA2552
symbol: STY0792
gene_biotype: protein_coding
description:
  Putative tolR membrane protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: PBPRA2553
symbol: Y3058
gene_biotype: protein_coding
description:
  Putative TolQ protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: PBPRA2557
symbol: SF0563
gene_biotype: protein_coding
description:
  Putative cytochrome d ubiquinol oxidase, subunit II; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2558
symbol: ECS0768
gene_biotype: protein_coding
description:
  Putative cytochrome d ubiquinol oxidase, subunit I; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2559
symbol: SF4087
gene_biotype: protein_coding
description:
  Hypothetical peptidase E; Predicted by orpheus program; predicted by glimmer program; Belongs to the peptidase S51 family.


ensembl_gene_id: PBPRA2560
symbol: SF1652
gene_biotype: protein_coding
description:
  Putative RnfA-related protein (RnfA, Predicted NADH:ubiquinone oxidoreductase, subunit RnfA); Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: PBPRA2561
symbol: HD0397
gene_biotype: protein_coding
description:
  Putative RnfB-related protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.


ensembl_gene_id: PBPRA2562
symbol: PLU2379
gene_biotype: protein_coding
description:
  Putative NADH:ubiquinone oxidoreductase, subunit RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.


ensembl_gene_id: PBPRA2563
symbol: SF1655
gene_biotype: protein_coding
description:
  Putative RnfD-related protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: PBPRA2564
symbol: PLU2381
gene_biotype: protein_coding
description:
  Hypothetical RnfG-related protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.


ensembl_gene_id: PBPRA2565
symbol: YDGQ
gene_biotype: protein_coding
description:
  Putative RnfE-related protein (electron transport complex protein); Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: PBPRA2566
symbol: STY1669
gene_biotype: protein_coding
description:
  Putative endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: PBPRA2569
symbol: VV11252
gene_biotype: protein_coding
description:
  Putative manganese superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: PBPRA2571
symbol: VV13102
gene_biotype: protein_coding
description:
  Putative sodium-type flagellar protein MotY; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2572
symbol: SO2755
gene_biotype: protein_coding
description:
  Putative ribonuclease T; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis.


ensembl_gene_id: PBPRA2577
symbol: STY1689
gene_biotype: protein_coding
description:
  Putative glutaredoxin-related protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the glutaredoxin family. Monothiol subfamily.


ensembl_gene_id: PBPRA2578
symbol: SODB
gene_biotype: protein_coding
description:
  Putative superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: PBPRA2579
symbol: PSPTO217
gene_biotype: protein_coding
description:
  Putative aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: PBPRA2585
symbol: PBPRA2585
gene_biotype: protein_coding
description:
  Putative nucleoid-associated bacterial protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2586
symbol: STY2465
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the UPF0352 family.


ensembl_gene_id: PBPRA2587
symbol: VV13122
gene_biotype: protein_coding
description:
  Hypothetical hydrolase of alkaline phosphatase superfamily; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2590
symbol: C2166
gene_biotype: protein_coding
description:
  Putative DNA topoisomerase III; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removi [...]


ensembl_gene_id: PBPRA2591
symbol: Z0657
gene_biotype: protein_coding
description:
  Hypothetical ATPase; Involved in the post-transcriptional modification of the uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Catalyzes the conversion of 2-thiouridine (S2U-RNA) to 2- selenouridine (Se2U-RNA). Acts in a two-step process involving geranylation of 2-thiouridine (S2U) to S-geranyl-2-thiouridine (geS2U) and subsequent selenation of the latter derivative to 2-selenouridine (Se2U) in the tRNA chain.


ensembl_gene_id: PBPRA2601
symbol: MSRB
gene_biotype: protein_coding
description:
  Putative PilB-related protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the MsrB Met sulfoxide reductase family.


ensembl_gene_id: PBPRA2603
symbol: Z2820
gene_biotype: protein_coding
description:
  Hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the glucose-6-phosphate 1-epimerase family.


ensembl_gene_id: PBPRA2606
symbol: VV2350
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the UPF0229 family.


ensembl_gene_id: PBPRA2608
symbol: VV2121
gene_biotype: protein_coding
description:
  Putative fatty acid metabolism regulatorprotein; Multifunctional regulator of fatty acid metabolism.


ensembl_gene_id: PBPRA2609
symbol: C1634
gene_biotype: protein_coding
description:
  Putative Na+/H+-exchanging protein; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaB Na(+)/H(+) (TC 2.A.34) antiporter family.


ensembl_gene_id: PBPRA2610
symbol: DSBB
gene_biotype: protein_coding
description:
  Putative disulfide bond formation protein B(Disulfide oxidoreductase); Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family.


ensembl_gene_id: PBPRA2613
symbol: VV2126
gene_biotype: protein_coding
description:
  Putative regulator protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs. Belongs to the Dus family. DusC subfamily.


ensembl_gene_id: PBPRA2614
symbol: VV2402
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the UPF0260 family.


ensembl_gene_id: PBPRA2621
symbol: PLU3069
gene_biotype: protein_coding
description:
  Hypothetical o-succinylbenzoate-CoA ligase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2622
symbol: MENC
gene_biotype: protein_coding
description:
  Putative o-succinylbenzoate-CoA synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).


ensembl_gene_id: PBPRA2623
symbol: STM2308
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes a proton abstraction reaction that results in 2,5- elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6- hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC).


ensembl_gene_id: PBPRA2624
symbol: C2808
gene_biotype: protein_coding
description:
  2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC).


ensembl_gene_id: PBPRA2625
symbol: PLU3074
gene_biotype: protein_coding
description:
  Hypothetical menaquinone-specific isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate.


ensembl_gene_id: PBPRA2627
symbol: SF2367
gene_biotype: protein_coding
description:
  Putative hydrolase of HD superfamily; Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates.


ensembl_gene_id: PBPRA2628
symbol: PBPRA2628
gene_biotype: protein_coding
description:
  Putative deoxyguanosinetriphosphate triphosphohydrolase; Predicted by orpheus program; predicted by glimmer program; Belongs to the dGTPase family. Type 2 subfamily.


ensembl_gene_id: PBPRA2633
symbol: ECS0495
gene_biotype: protein_coding
description:
  Putative peptidyl-prolyl cis-trans isomerase D; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2634
symbol: YPO3154
gene_biotype: protein_coding
description:
  Putative bacterial nucleoid DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: PBPRA2635
symbol: S0390
gene_biotype: protein_coding
description:
  Putative ATP-dependent protease LA; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: PBPRA2636
symbol: CLPX
gene_biotype: protein_coding
description:
  Putative ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: PBPRA2637
symbol: PLU3869
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: PBPRA2638
symbol: tig
gene_biotype: protein_coding
description:
  Similar to Tig, FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: PBPRA2641
symbol: C0645
gene_biotype: protein_coding
description:
  Putative methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: PBPRA2642
symbol: Y2631
gene_biotype: protein_coding
description:
  Putative glucose-1-phosphate uridylyltransferase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2643
symbol: T3320
gene_biotype: protein_coding
description:
  Putative transcriptional activator RfaH; Enhances distal genes transcription elongation in a specialized subset of operons that encode extracytoplasmic components. Belongs to the RfaH family.


ensembl_gene_id: PBPRA2646
symbol: CV0581
gene_biotype: protein_coding
description:
  Putative transcriptional regulator; Predicted by orpheus program; predicted by glimmer program; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: PBPRA2648
symbol: YPO2772
gene_biotype: protein_coding
description:
  Putative glutamine phosphoribosylpyrophosphate amidotransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: PBPRA2649
symbol: SF2389
gene_biotype: protein_coding
description:
  Putative bacteriocin production protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2651
symbol: YPO2769
gene_biotype: protein_coding
description:
  Putative folylpolyglutamate synthase/dihydrofolate synthase; Predicted by orpheus program; predicted by glimmer program; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: PBPRA2652
symbol: C2861
gene_biotype: protein_coding
description:
  Putative acetyl-CoA carboxylase, carboxyl transferase beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: PBPRA2653
symbol: truA
gene_biotype: protein_coding
description:
  Putative tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: PBPRA2655
symbol: SO3070
gene_biotype: protein_coding
description:
  Putative aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: PBPRA2656
symbol: PLU3175
gene_biotype: protein_coding
description:
  Putative erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate.


ensembl_gene_id: PBPRA2658
symbol: FABB
gene_biotype: protein_coding
description:
  Putative 3-oxoacyl-[acyl-carrier-protein] synthase I; Predicted by orpheus program; predicted by glimmer program; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: PBPRA2659
symbol: mnmC
gene_biotype: protein_coding
description:
  Hypothetical peptidase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the N-terminal section; belongs to the methyltransferase superfamily. tRNA (mnm(5)s(2)U34)-methyltransferase family.


ensembl_gene_id: PBPRA2663
symbol: HD1844
gene_biotype: protein_coding
description:
  Hypothetical undecaprenylphosphateN-acetylglucosamine 1-phosphate transferase; Catalyzes the transfer of the GlcNAc-1-phosphate moiety from UDP-GlcNAc onto the carrier lipid undecaprenyl phosphate (C55-P), yielding GlcNAc-pyrophosphoryl-undecaprenyl (GlcNAc-PP-C55). Belongs to the glycosyltransferase 4 family. WecA subfamily.


ensembl_gene_id: PBPRA2664
symbol: HD1844-2
gene_biotype: protein_coding
description:
  Hypothetical undecaprenylphosphate N-acetylglucosamine 1-phosphate transferase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2671
symbol: PBPRA2671
gene_biotype: protein_coding
description:
  Hypothetical cell growth regulatory protein mazE; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2674
symbol: SO1665
gene_biotype: protein_coding
description:
  Putative UTP-glucose-1-phosphateuridylyltransferase, galU; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2675
symbol: UGD
gene_biotype: protein_coding
description:
  Putative nucleotide sugar dehydrogenase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2677
symbol: PBPRA2677
gene_biotype: protein_coding
description:
  Hypothetical teichoic acid biosynthesis protein A; Predicted by orpheus program; predicted by glimmer program; Belongs to the glycosyltransferase 26 family.


ensembl_gene_id: PBPRA2685
symbol: MW0603
gene_biotype: protein_coding
description:
  Putative glycerol-3-phosphatecytidyltransferase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2686
symbol: PLU3743
gene_biotype: protein_coding
description:
  Hypothetical tyrosine-protein kinase Wzc; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2687
symbol: ORF40
gene_biotype: protein_coding
description:
  Putative protein-tyrosine-phosphatase; Predicted by orpheus program; predicted by glimmer program; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: PBPRA2688
symbol: CPSH
gene_biotype: protein_coding
description:
  Putative capsular polysaccharide transport protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2691
symbol: SO3158
gene_biotype: protein_coding
description:
  Hypothetical polysaccharide synthesis-related protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2703
symbol: TAGD1
gene_biotype: protein_coding
description:
  Putative glycerol-3-phosphate cytidyltransferase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2707
symbol: CJ1317
gene_biotype: protein_coding
description:
  Putative polysaccharide biosynthesis protein, NeuB; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2710
symbol: FLAA2
gene_biotype: protein_coding
description:
  Putative FlmB; Predicted by orpheus program; predicted by glimmer program; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: PBPRA2711
symbol: WS2061
gene_biotype: protein_coding
description:
  Hypothetical polysaccharide biosynthesis protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2712
symbol: TAGF
gene_biotype: protein_coding
description:
  Hypothetical teichoic acid biosynthesis protein F; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2714
symbol: S2540
gene_biotype: protein_coding
description:
  Putative chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: PBPRA2716
symbol: YPO2263
gene_biotype: protein_coding
description:
  Putative mannose-6-phosphate isomer; Predicted by orpheus program; predicted by glimmer program; Belongs to the mannose-6-phosphate isomerase type 1 family.


ensembl_gene_id: PBPRA2719
symbol: SAV2641
gene_biotype: protein_coding
description:
  Putative phosphotransferase system fructose-specific component IIB; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2720
symbol: VP0750
gene_biotype: protein_coding
description:
  Putative 16S rRNA uridine-516 pseudouridylate synthase; Predicted by orpheus program; predicted by glimmer program; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: PBPRA2722
symbol: VV1128
gene_biotype: protein_coding
description:
  Hypothetical HlyD family secretion protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: PBPRA2735
symbol: VV0783
gene_biotype: protein_coding
description:
  Putative choline-glycine betaine transporter; Predicted by orpheus program; predicted by glimmer program; Belongs to the BCCT transporter (TC 2.A.15) family.


ensembl_gene_id: PBPRA2739
symbol: PA2925
gene_biotype: protein_coding
description:
  Putative ABC-type arginine/histidine transport system, permease component; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2740
symbol: VP1000
gene_biotype: protein_coding
description:
  Putative ABC-type arginine transport system, permease component; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2741
symbol: CV3085
gene_biotype: protein_coding
description:
  Putative amino acid ABC transporter, periplasmic amino acid-binding protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: PBPRA2742
symbol: CV0855
gene_biotype: protein_coding
description:
  Putative ABC-type histidine transport system, ATPase component; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2744
symbol: ARSR
gene_biotype: protein_coding
description:
  Hypothetical transcriptional regulator, ArsR family; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2746
symbol: SPYM3_11
gene_biotype: protein_coding
description:
  Hypothetical peptidase, M20/M25/M40 family; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2752
symbol: PFLA
gene_biotype: protein_coding
description:
  Putative pyruvate formate-lyase 1 activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.


ensembl_gene_id: PBPRA2762
symbol: BC0561
gene_biotype: protein_coding
description:
  Hypothetical Response regulator ofcitrate/malate metabolism; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2763
symbol: T2242
gene_biotype: protein_coding
description:
  Hypothetical signal transduction histidine kinase regulating citrate/malate metabolism; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2764
symbol: FHS
gene_biotype: protein_coding
description:
  Putative formate-tetrahydrofolate ligase; Predicted by orpheus program; predicted by glimmer program; Belongs to the formate--tetrahydrofolate ligase family.


ensembl_gene_id: PBPRA2768
symbol: STM2335
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the UPF0304 family.


ensembl_gene_id: PBPRA2769
symbol: VPA0825
gene_biotype: protein_coding
description:
  Hypothetical phosphoglycerate transport regulatory protein PgtC; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2770
symbol: VV20209
gene_biotype: protein_coding
description:
  Hypothetical phosphoglycerate transport regulatory protein PgtB; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2771
symbol: T0462
gene_biotype: protein_coding
description:
  Phosphoglycerate transport system transcription regulator; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2772
symbol: SF3395
gene_biotype: protein_coding
description:
  Hypothetical transport system permease protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2776
symbol: CELA
gene_biotype: protein_coding
description:
  Putative PTS system, cellobiose-specific IIBcomponent; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2777
symbol: PTS3C
gene_biotype: protein_coding
description:
  Hypothetical phosphotransferase systemcellobiose-specific component IIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.


ensembl_gene_id: PBPRA2778
symbol: STY1799
gene_biotype: protein_coding
description:
  Putative PTS system, cellobiose-specific IIAcomponent; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2784
symbol: SF3395-2
gene_biotype: protein_coding
description:
  Putative transport system permease protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2791
symbol: C2229
gene_biotype: protein_coding
description:
  Putative SAM-dependent methyltransferase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2793
symbol: ATU2672
gene_biotype: protein_coding
description:
  Putative ABC transporter substrate-binding protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2794
symbol: R03212
gene_biotype: protein_coding
description:
  Putative ABC transporter, permease protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: PBPRA2798
symbol: PLU3095
gene_biotype: protein_coding
description:
  Putative acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: PBPRA2799
symbol: Z3559
gene_biotype: protein_coding
description:
  Putative phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.


ensembl_gene_id: PBPRA2810
symbol: VV0993
gene_biotype: protein_coding
description:
  Putative nitrogen regulatory protein P-II family protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2811
symbol: WS0013
gene_biotype: protein_coding
description:
  Hypothetical PTS system mannose-specific, factor IIC; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2812
symbol: VV0992
gene_biotype: protein_coding
description:
  Putative PTS system mannose-specific, factor IIC; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2813
symbol: SF2380
gene_biotype: protein_coding
description:
  Hypothetical sugar nucleotide epimerase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2818
symbol: ATU3591
gene_biotype: protein_coding
description:
  Hypothetical oxidoreductase, short-chain dehydrogenase/reductase family; Predicted by orpheus program; predicted by glimmer program; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: PBPRA2823
symbol: VPA0662
gene_biotype: protein_coding
description:
  Hypothetical SoxR, transcriptional regulators; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2824
symbol: COPA
gene_biotype: protein_coding
description:
  Hypothetical cation-transporting ATPase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2835
symbol: STY0541
gene_biotype: protein_coding
description:
  Hypothetical protein ybaK; Predicted by orpheus program; predicted by glimmer program; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.


ensembl_gene_id: PBPRA2841
symbol: kdsA
gene_biotype: protein_coding
description:
  Putative 2-dehydro-3-deoxyphosphooctonate aldolase; Predicted by orpheus program; predicted by glimmer program; Belongs to the KdsA family.


ensembl_gene_id: PBPRA2844
symbol: HEMK
gene_biotype: protein_coding
description:
  Putative HemK protein, Methylase of polypeptide chain release factors; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: PBPRA2845
symbol: PRFA
gene_biotype: protein_coding
description:
  Putative peptide chain release factor A; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: PBPRA2846
symbol: hemA
gene_biotype: protein_coding
description:
  Putative glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: PBPRA2847
symbol: VV10255
gene_biotype: protein_coding
description:
  Hypothetical outer membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.


ensembl_gene_id: PBPRA2848
symbol: S1295
gene_biotype: protein_coding
description:
  Putative kinase, GHMP family; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: PBPRA2849
symbol: S1294
gene_biotype: protein_coding
description:
  Putative phosphoribosylpyrophosphate synthetase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: PBPRA2850
symbol: SF1207
gene_biotype: protein_coding
description:
  Putative peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: PBPRA2851
symbol: YCHF
gene_biotype: protein_coding
description:
  Putative GTP-binding protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: PBPRA2876
symbol: STY0717
gene_biotype: protein_coding
description:
  Putative 2-polyprenyl-6-methoxyphenol hydroxylase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2877
symbol: PLU4006
gene_biotype: protein_coding
description:
  Hypothetical transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.


ensembl_gene_id: PBPRA2878
symbol: STY0716
gene_biotype: protein_coding
description:
  Putative 2-methylthioadenine synthetase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: PBPRA2880
symbol: VV0915
gene_biotype: protein_coding
description:
  Putative predicted metal dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: PBPRA2882
symbol: LNT
gene_biotype: protein_coding
description:
  Putative apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: PBPRA2885
symbol: S0661
gene_biotype: protein_coding
description:
  Putative leucyl-tRNA synthetase; Predicted by orpheus program; predicted by glimmer program; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: PBPRA2886
symbol: RLPB
gene_biotype: protein_coding
description:
  Hypothetical rare lipoprotein B; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane.


ensembl_gene_id: PBPRA2887
symbol: STY0697
gene_biotype: protein_coding
description:
  Hypothetical DNA polymerase III, delta subunit; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2888
symbol: Y1180
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: PBPRA2889
symbol: VV0907
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: PBPRA2890
symbol: STY0691
gene_biotype: protein_coding
description:
  Putative penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.


ensembl_gene_id: PBPRA2891
symbol: PLU1296
gene_biotype: protein_coding
description:
  Putative rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: PBPRA2892
symbol: VV0904
gene_biotype: protein_coding
description:
  Hypothetical rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: PBPRA2894
symbol: VV0902
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the UPF0250 family.


ensembl_gene_id: PBPRA2895
symbol: lipB
gene_biotype: protein_coding
description:
  Putative lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: PBPRA2896
symbol: SO1161
gene_biotype: protein_coding
description:
  Putative lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: PBPRA2897
symbol: VP2272
gene_biotype: protein_coding
description:
  Hypothetical lipoprotein-34 NlpB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: PBPRA2898
symbol: DAPA
gene_biotype: protein_coding
description:
  Putative dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: PBPRA2899
symbol: YPO3063
gene_biotype: protein_coding
description:
  Hypothetical glycine cleavage system transcriptional repressor; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2900
symbol: STY2729
gene_biotype: protein_coding
description:
  Putative bacterioferritin comigratory protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2902
symbol: C3011
gene_biotype: protein_coding
description:
  Hypothetical Zn-dependent protease; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state.


ensembl_gene_id: PBPRA2904
symbol: RS05245
gene_biotype: protein_coding
description:
  Putative Trp repressor-binding protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the WrbA family.


ensembl_gene_id: PBPRA2909
symbol: PLU2759
gene_biotype: protein_coding
description:
  Putative uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: PBPRA2910
symbol: PURM
gene_biotype: protein_coding
description:
  Putative phosphoribosylformylglycinamidine cyclo-ligase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2911
symbol: S2693
gene_biotype: protein_coding
description:
  Putative phosphoribosylglycinamide formyltransferase 2; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: PBPRA2913
symbol: VV2518
gene_biotype: protein_coding
description:
  Putative phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.


ensembl_gene_id: PBPRA2914
symbol: C1664
gene_biotype: protein_coding
description:
  Hypothetical sulfate permease family protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2917
symbol: PLU0943
gene_biotype: protein_coding
description:
  Putative DNA polymerase III, epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.


ensembl_gene_id: PBPRA2919
symbol: C0250
gene_biotype: protein_coding
description:
  Hypothetical SAM-dependent methyltransferase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2920
symbol: YPO1079
gene_biotype: protein_coding
description:
  Putative hydroxyacylglutathione hydrolase GloB; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.


ensembl_gene_id: PBPRA2934
symbol: SAV2765
gene_biotype: protein_coding
description:
  Putative ABC-type oligopeptide transportsystem, ATPase component; Predicted by orpheus program; predicted by glimmer program; Belongs to the ABC transporter superfamily.


ensembl_gene_id: PBPRA2935
symbol: TM0501
gene_biotype: protein_coding
description:
  ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Predicted by orpheus program; predicted by glimmer program; Belongs to the ABC transporter superfamily.


ensembl_gene_id: PBPRA2936
symbol: VV12974
gene_biotype: protein_coding
description:
  Putative binding protein component ofABC transporter; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2937
symbol: RS04550
gene_biotype: protein_coding
description:
  Putative peptide ABC transporter,permease protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2938
symbol: RSC1174
gene_biotype: protein_coding
description:
  Putative transmembrane ABC transporterprotein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2939
symbol: YAED
gene_biotype: protein_coding
description:
  Putative histidinol phosphatase-related protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2940
symbol: SF0190
gene_biotype: protein_coding
description:
  Putative ABC-type metal ion transportsystem, ATPase component; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: PBPRA2941
symbol: YAEE
gene_biotype: protein_coding
description:
  Putative ABC-type metal ion transport system,permease component; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2942
symbol: YAEC
gene_biotype: protein_coding
description:
  Putative lipoprotein YaeC; Predicted by orpheus program; predicted by glimmer program; Belongs to the nlpA lipoprotein family.


ensembl_gene_id: PBPRA2944
symbol: PROS
gene_biotype: protein_coding
description:
  Putative prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and inv [...]


ensembl_gene_id: PBPRA2947
symbol: PBPRA2947
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the UPF0253 family.


ensembl_gene_id: PBPRA2951
symbol: SF0178
gene_biotype: protein_coding
description:
  Hypothetical cell cycle protein MesJ; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: PBPRA2952
symbol: C0223
gene_biotype: protein_coding
description:
  Putative Acetyl-CoA carboxylase alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: PBPRA2953
symbol: DNAE
gene_biotype: protein_coding
description:
  Putative DNA polymerase III, alpha subunit; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2954
symbol: rnhB
gene_biotype: protein_coding
description:
  Putative ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.


ensembl_gene_id: PBPRA2955
symbol: lpxB
gene_biotype: protein_coding
description:
  Putative lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: PBPRA2956
symbol: LPXA
gene_biotype: protein_coding
description:
  Putative Acyl-UDP-N-acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: PBPRA2957
symbol: HD1188
gene_biotype: protein_coding
description:
  3R-hydroxymyristoyl-acyl-carrier-protein dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: PBPRA2958
symbol: LPXD
gene_biotype: protein_coding
description:
  Putative UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: PBPRA2959
symbol: SO1638
gene_biotype: protein_coding
description:
  Putative outer membrane protein OmpH; Molecular chaperone that interacts specifically with outer membrane proteins, thus maintaining the solubility of early folding intermediates during passage through the periplasm.


ensembl_gene_id: PBPRA2960
symbol: Y3127
gene_biotype: protein_coding
description:
  Putative surface antigen; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: PBPRA2961
symbol: S0169
gene_biotype: protein_coding
description:
  Putative membrane-associated Zn-dependent protease; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2962
symbol: dxr
gene_biotype: protein_coding
description:
  Putative 1-deoxy-D-xylulose 5-phosphatereductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: PBPRA2963
symbol: HD1193
gene_biotype: protein_coding
description:
  Putative phosphatidate cytidylyltransferase; Predicted by orpheus program; predicted by glimmer program; Belongs to the CDS family.


ensembl_gene_id: PBPRA2964
symbol: uppS
gene_biotype: protein_coding
description:
  Putative undecaprenyl diphosphate synthase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di- trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide.


ensembl_gene_id: PBPRA2965
symbol: frr
gene_biotype: protein_coding
description:
  Putative ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: PBPRA2967
symbol: tsf
gene_biotype: protein_coding
description:
  Putative elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: PBPRA2968
symbol: S0162
gene_biotype: protein_coding
description:
  Putative 30S ribosomal protein S2; Predicted by orpheus program; predicted by glimmer program; Belongs to the universal ribosomal protein uS2 family.


ensembl_gene_id: PBPRA2969
symbol: PLU0671
gene_biotype: protein_coding
description:
  Putative methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: PBPRA2970
symbol: S0160
gene_biotype: protein_coding
description:
  Putative protein-P-II uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism.


ensembl_gene_id: PBPRA2971
symbol: STY0233
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the UPF0325 family.


ensembl_gene_id: PBPRA2981
symbol: syd
gene_biotype: protein_coding
description:
  Hypothetical Syd protein; Interacts with the SecY protein in vivo. May bind preferentially to an uncomplexed state of SecY, thus functioning either as a chelating agent for excess SecY in the cell or as a regulatory factor that negatively controls the translocase function. Belongs to the Syd family.


ensembl_gene_id: PBPRA2982
symbol: T2876
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).


ensembl_gene_id: PBPRA2984
symbol: VP0699
gene_biotype: protein_coding
description:
  Hypothetical GGDEF domain family protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA2986
symbol: ECS3658
gene_biotype: protein_coding
description:
  Putative exodeoxyribonuclease IX; Has flap endonuclease activity. During DNA replication, flap endonucleases cleave the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment.


ensembl_gene_id: PBPRA2987
symbol: STY3120
gene_biotype: protein_coding
description:
  Putative SAM-dependentmethyltransferase; Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily.


ensembl_gene_id: PBPRA2991
symbol: YPO1028
gene_biotype: protein_coding
description:
  Putative aminotransferase, class V; Predicted by orpheus program; predicted by glimmer program; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: PBPRA2994
symbol: STM2988
gene_biotype: protein_coding
description:
  Putative membrane-bound lytic murein transglycosylase A; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division.


ensembl_gene_id: PBPRA2997
symbol: VC2319
gene_biotype: protein_coding
description:
  Putative exodeoxyribonuclease V, 67 kDa subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombina [...]


ensembl_gene_id: PBPRA2998
symbol: Y3164
gene_biotype: protein_coding
description:
  Putative exodeoxyribonuclease V; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. [...]


ensembl_gene_id: PBPRA3003
symbol: STY2088
gene_biotype: protein_coding
description:
  Putative DNA damage-inducible gene in SOSregulon, dependent on cyclic AMP and H-NS; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA3004
symbol: PA3666
gene_biotype: protein_coding
description:
  Putative 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA.


ensembl_gene_id: PBPRA3006
symbol: VVA1136
gene_biotype: protein_coding
description:
  Hypothetical multidrug resistance protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA3008
symbol: YPO1874-4
gene_biotype: protein_coding
description:
  Conserved hypothetical protein [Yersinia pestis]; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA3018
symbol: PLU1270
gene_biotype: protein_coding
description:
  Putative clpB, ATPases with chaperone activity; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE. Acts before DnaK, in the processing of protein aggregates. Protein binding stimulates the ATPase activity; ATP hydrolysis unfolds the denatured protein aggregates, which probably helps expose new hydrophobic binding sites on the surface of ClpB-bound aggregates, contributing to the solubilization and refolding of denatured protein aggregates by DnaK (By similarity). Belongs to the C [...]


ensembl_gene_id: PBPRA3020
symbol: C3115
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the multicopper oxidase YfiH/RL5 family.


ensembl_gene_id: PBPRA3021
symbol: RLUD
gene_biotype: protein_coding
description:
  Putative ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: PBPRA3023
symbol: STY2853
gene_biotype: protein_coding
description:
  Hypothetical sigma-54 modulation protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA3024
symbol: PM0150
gene_biotype: protein_coding
description:
  Putative chorismate mutase/prephenate dehydratase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA3025
symbol: STM2669
gene_biotype: protein_coding
description:
  Putative chorismate mutase/prephenate dehydrogenase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA3026
symbol: AROF
gene_biotype: protein_coding
description:
  Putative phospho-2-dehydro-3-deoxyheptonatealdolase, tyr-sensitive; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).


ensembl_gene_id: PBPRA3027
symbol: Z3303
gene_biotype: protein_coding
description:
  Hypothetical LytS, regulator of cell autolysis; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA3031
symbol: SMU.1308
gene_biotype: protein_coding
description:
  Putative translation initiation inhibitor, yjgF family; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA3038
symbol: rplS
gene_biotype: protein_coding
description:
  Putative ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: PBPRA3039
symbol: TRMD
gene_biotype: protein_coding
description:
  Putative tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: PBPRA3040
symbol: RIMM
gene_biotype: protein_coding
description:
  Putative 16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: PBPRA3041
symbol: PLU1257
gene_biotype: protein_coding
description:
  Putative ribosomal protein S16; Predicted by orpheus program; predicted by glimmer program; Belongs to the bacterial ribosomal protein bS16 family.


ensembl_gene_id: PBPRA3042
symbol: PLU1256
gene_biotype: protein_coding
description:
  Putative signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual [...]


ensembl_gene_id: PBPRA3044
symbol: Z3906
gene_biotype: protein_coding
description:
  Putative Mg2+ and Co2+ transporter CorB; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA3045
symbol: S2901
gene_biotype: protein_coding
description:
  Putative autoinducer-2 production protein LuxS; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family.


ensembl_gene_id: PBPRA3047
symbol: S2902
gene_biotype: protein_coding
description:
  Putative glutamate-cysteine ligase; Predicted by orpheus program; predicted by glimmer program; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.


ensembl_gene_id: PBPRA3051
symbol: HD0783
gene_biotype: protein_coding
description:
  Putative oxaloacetate decarboxylase,alphasubunit; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA3052
symbol: oadG
gene_biotype: protein_coding
description:
  Putative oxaloacetate decarboxylase; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation.


ensembl_gene_id: PBPRA3065
symbol: CSRA
gene_biotype: protein_coding
description:
  Putative carbon storage regulator; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s).


ensembl_gene_id: PBPRA3066
symbol: VP2547
gene_biotype: protein_coding
description:
  Hypothetical aspartokinase; Predicted by orpheus program; predicted by glimmer program; Belongs to the aspartokinase family.


ensembl_gene_id: PBPRA3067
symbol: alaS
gene_biotype: protein_coding
description:
  Putative alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: PBPRA3068
symbol: RECA
gene_biotype: protein_coding
description:
  Putative RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: PBPRA3069
symbol: STY2951
gene_biotype: protein_coding
description:
  Putative CinA-related protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the CinA family.


ensembl_gene_id: PBPRA3070
symbol: mutS
gene_biotype: protein_coding
description:
  Putative DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: PBPRA3071
symbol: VV11588
gene_biotype: protein_coding
description:
  Putative RNA polymerase sigma-38 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response.


ensembl_gene_id: PBPRA3073
symbol: PCM
gene_biotype: protein_coding
description:
  Putative L-isoaspartate protein carboxylmethyltransferase type II; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.


ensembl_gene_id: PBPRA3074
symbol: surE
gene_biotype: protein_coding
description:
  Putative acid phosphatase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: PBPRA3075
symbol: truD
gene_biotype: protein_coding
description:
  Hypothetical hydrogenase subunit; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.


ensembl_gene_id: PBPRA3076
symbol: SO3437
gene_biotype: protein_coding
description:
  Putative 2C-methyl-D-erythritol2,4-cyclodiphosphate synthase MeCPs; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: PBPRA3077
symbol: YGBP
gene_biotype: protein_coding
description:
  Putative 2-C-methyl-D-erythritol 4-phosphatecytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: PBPRA3078
symbol: SF2771
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: PBPRA3079
symbol: ENO
gene_biotype: protein_coding
description:
  Putative enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.


ensembl_gene_id: PBPRA3080
symbol: SO3441
gene_biotype: protein_coding
description:
  Putative CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: PBPRA3082
symbol: Y0811
gene_biotype: protein_coding
description:
  Putative GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: PBPRA3083
symbol: VP2566
gene_biotype: protein_coding
description:
  Putative TrmA family RNA methyltransferase; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily.


ensembl_gene_id: PBPRA3084
symbol: STM2958
gene_biotype: protein_coding
description:
  Putative sensor histidine kinase/response regulator; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA3085
symbol: S2798
gene_biotype: protein_coding
description:
  Putative phosphopantetheinyl transferase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: PBPRA3086
symbol: S2799
gene_biotype: protein_coding
description:
  Putative pyridoxal phosphate biosyntheticprotein PdxJ; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: PBPRA3088
symbol: S2801
gene_biotype: protein_coding
description:
  Putative GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: PBPRA3089
symbol: RNC
gene_biotype: protein_coding
description:
  Putative ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: PBPRA3090
symbol: SO1347
gene_biotype: protein_coding
description:
  Putative signal peptidase I; Predicted by orpheus program; predicted by glimmer program; Belongs to the peptidase S26 family.


ensembl_gene_id: PBPRA3091
symbol: LEPA
gene_biotype: protein_coding
description:
  Putative GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: PBPRA3093
symbol: T0272
gene_biotype: protein_coding
description:
  Putative sigma-E factor regulatory protein RseB; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA3094
symbol: SF2634
gene_biotype: protein_coding
description:
  Putative sigma-E factor negative regulatory protein RseA; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while [...]


ensembl_gene_id: PBPRA3095
symbol: Y1290
gene_biotype: protein_coding
description:
  Putative rpoE protein homolog; Predicted by orpheus program; predicted by glimmer program; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: PBPRA3098
symbol: PBPRA3098
gene_biotype: protein_coding
description:
  Hypothetical cell shape-determining protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA3099
symbol: YPO0897
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH and other flavinylated proteins as well.


ensembl_gene_id: PBPRA3100
symbol: STY3204
gene_biotype: protein_coding
description:
  Hypothetical protein; Folate-binding protein involved in regulating the level of ATP-DnaA and in the modification of some tRNAs. It is probably a key factor in regulatory networks that act via tRNA modification, such as initiation of chromosomal replication; Belongs to the tRNA-modifying YgfZ family.


ensembl_gene_id: PBPRA3111
symbol: VV2648
gene_biotype: protein_coding
description:
  Hypothetical LysR-like regular protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: PBPRA3114
symbol: PBPRA3114
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the UPF0251 family.


ensembl_gene_id: PBPRA3116
symbol: PLU3597
gene_biotype: protein_coding
description:
  Putative glycine cleavage complex protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: PBPRA3120
symbol: STY3216
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: PBPRA3121
symbol: STM3061
gene_biotype: protein_coding
description:
  Hypothetical 5-formyltetrahydrofolatecyclo-ligase-family protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.


ensembl_gene_id: PBPRA3122
symbol: rpiA
gene_biotype: protein_coding
description:
  Putative ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.


ensembl_gene_id: PBPRA3123
symbol: Y3301
gene_biotype: protein_coding
description:
  Putative phosphoglycerate dehydrogenase; Predicted by orpheus program; predicted by glimmer program; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: PBPRA3124
symbol: Y3301-2
gene_biotype: protein_coding
description:
  Putative D-3-phosphoglycerate dehydrogenase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA3126
symbol: ICIA
gene_biotype: protein_coding
description:
  Putative transcriptional regulator; Controls the transcription of genes involved in arginine and lysine metabolism; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: PBPRA3130
symbol: PLU0957
gene_biotype: protein_coding
description:
  Putative fructose-bisphosphate aldolase, class II; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.


ensembl_gene_id: PBPRA3131
symbol: PGK
gene_biotype: protein_coding
description:
  Putative phosphoglycerate kinase; Predicted by orpheus program; predicted by glimmer program; Belongs to the phosphoglycerate kinase family.


ensembl_gene_id: PBPRA3132
symbol: STY3228
gene_biotype: protein_coding
description:
  Putative erythrose-4-phosphate dehydrogenase; Catalyzes the NAD-dependent conversion of D-erythrose 4- phosphate to 4-phosphoerythronate.


ensembl_gene_id: PBPRA3133
symbol: Y3310
gene_biotype: protein_coding
description:
  Putative transketolase 1; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.


ensembl_gene_id: PBPRA3134
symbol: metK
gene_biotype: protein_coding
description:
  Putative MetK, S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: PBPRA3135
symbol: sprT
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the SprT family.


ensembl_gene_id: PBPRA3136
symbol: ENDA
gene_biotype: protein_coding
description:
  Putative extracellular deoxyribonucleaseprecursor; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA3137
symbol: T3006
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: PBPRA3138
symbol: gshB
gene_biotype: protein_coding
description:
  Putative glutathione synthetase; Predicted by orpheus program; predicted by glimmer program; Belongs to the prokaryotic GSH synthase family.


ensembl_gene_id: PBPRA3139
symbol: STY3249
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the UPF0301 (AlgH) family.


ensembl_gene_id: PBPRA3140
symbol: YQGF
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.


ensembl_gene_id: PBPRA3141
symbol: XAC2923
gene_biotype: protein_coding
description:
  Putative twitching motility protein PilT; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA3143
symbol: YGGS
gene_biotype: protein_coding
description:
  Predicted enzyme with a TIM-barrel fold; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: PBPRA3144
symbol: SO3354
gene_biotype: protein_coding
description:
  Putative pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: PBPRA3146
symbol: SF2944
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the UPF0235 family.


ensembl_gene_id: PBPRA3148
symbol: S3149
gene_biotype: protein_coding
description:
  Hypothetical Xanthosine triphosphate pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: PBPRA3149
symbol: ECS3831
gene_biotype: protein_coding
description:
  Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: PBPRA3151
symbol: SF1569
gene_biotype: protein_coding
description:
  Putative glutaminase family protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the glutaminase family.


ensembl_gene_id: PBPRA3152
symbol: VV2883
gene_biotype: protein_coding
description:
  Putative S-adenosylmethionine-dependent methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: PBPRA3155
symbol: VV2885
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes.


ensembl_gene_id: PBPRA3156
symbol: S3163
gene_biotype: protein_coding
description:
  Putative membrane-bound lytic mureintransglycosylase C; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division.


ensembl_gene_id: PBPRA3166
symbol: SO1942
gene_biotype: protein_coding
description:
  Hypothetical HD-GYP hydrolase domain containing protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA3167
symbol: MRCB
gene_biotype: protein_coding
description:
  Putative penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits).


ensembl_gene_id: PBPRA3168
symbol: VV2757
gene_biotype: protein_coding
description:
  Hypothetical ATP-dependent helicase HrpB; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA3170
symbol: sfsA
gene_biotype: protein_coding
description:
  Putative sugar fermentation stimulation protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the SfsA family.


ensembl_gene_id: PBPRA3171
symbol: SO0874
gene_biotype: protein_coding
description:
  Putative DnaK suppressor protein; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression.


ensembl_gene_id: PBPRA3172
symbol: STY0210
gene_biotype: protein_coding
description:
  Putative glutamyl-tRNA synthetase-relatedprotein; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily.


ensembl_gene_id: PBPRA3173
symbol: S0138
gene_biotype: protein_coding
description:
  Putative polyA polymerase; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: PBPRA3174
symbol: STY0208
gene_biotype: protein_coding
description:
  Putative 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA3175
symbol: panB
gene_biotype: protein_coding
description:
  Putative 3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: PBPRA3176
symbol: SF0130
gene_biotype: protein_coding
description:
  Putative Pantoate-beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: PBPRA3178
symbol: YPO3406
gene_biotype: protein_coding
description:
  Hypothetical ABC transporterATP-binding protein yadG; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA3179
symbol: YADF
gene_biotype: protein_coding
description:
  Putative Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.


ensembl_gene_id: PBPRA3180
symbol: T0175
gene_biotype: protein_coding
description:
  Putative hypoxanthine ribosyl transferase; Predicted by orpheus program; predicted by glimmer program; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: PBPRA3182
symbol: PM0049
gene_biotype: protein_coding
description:
  Putative iron(III) ABC transporter, ATP-binding protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the ABC transporter superfamily.


ensembl_gene_id: PBPRA3183
symbol: SMC00775
gene_biotype: protein_coding
description:
  Putative iron(III) ABC transporter, permease protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA3184
symbol: AGR_C_34
gene_biotype: protein_coding
description:
  Putative ABC transporter, periplasmic iron-compound-binding protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA3187
symbol: PLU3616
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the UPF0231 family.


ensembl_gene_id: PBPRA3188
symbol: Z0174
gene_biotype: protein_coding
description:
  Putative sugar diacid utilization regulator; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA3190
symbol: ECS4002
gene_biotype: protein_coding
description:
  Putative glycerate kinase; Predicted by orpheus program; predicted by glimmer program; Belongs to the glycerate kinase type-1 family.


ensembl_gene_id: PBPRA3191
symbol: S0117
gene_biotype: protein_coding
description:
  Putative aconitate hydratase 2; Predicted by orpheus program; predicted by glimmer program; Belongs to the aconitase/IPM isomerase family.


ensembl_gene_id: PBPRA3194
symbol: STM0154
gene_biotype: protein_coding
description:
  Putative pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA3195
symbol: S0114
gene_biotype: protein_coding
description:
  Putative pyruvate dehydrogenase E2 component dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: PBPRA3196
symbol: STM0152
gene_biotype: protein_coding
description:
  Putative Pyruvate dehydrogenase complex,dehydrogenase component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: PBPRA3197
symbol: S0112
gene_biotype: protein_coding
description:
  Putative pyruvate dehydrogenase complexrepressor; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA3199
symbol: NADC
gene_biotype: protein_coding
description:
  Putative NadC, Nicotinate-nucleotide pyrophosphorylase; Predicted by orpheus program; predicted by glimmer program; Belongs to the NadC/ModD family.


ensembl_gene_id: PBPRA3200
symbol: PILA
gene_biotype: protein_coding
description:
  Hypothetical pilin PilA; Predicted by orpheus program; predicted by glimmer program; Belongs to the N-Me-Phe pilin family.


ensembl_gene_id: PBPRA3201
symbol: TAPB
gene_biotype: protein_coding
description:
  Putative type IV pilin assembly protein PilB; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA3202
symbol: PILC
gene_biotype: protein_coding
description:
  Putative Type IV pilin biogenesis protein; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA3203
symbol: PSPTO092
gene_biotype: protein_coding
description:
  Putative leader peptidase PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.


ensembl_gene_id: PBPRA3204
symbol: SF0100
gene_biotype: protein_coding
description:
  Hypothetical dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: PBPRA3205
symbol: zapD
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity.


ensembl_gene_id: PBPRA3206
symbol: VV2784
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C- terminal domain of GyrB, which probably disrupts DNA binding by the gyrase.


ensembl_gene_id: PBPRA3207
symbol: C0117
gene_biotype: protein_coding
description:
  Hypothetical mutator MutT protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the Nudix hydrolase family.


ensembl_gene_id: PBPRA3208
symbol: STM0136
gene_biotype: protein_coding
description:
  Putative SecA, preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family.


ensembl_gene_id: PBPRA3210
symbol: LPXC
gene_biotype: protein_coding
description:
  Putative UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: PBPRA3211
symbol: FTSZ
gene_biotype: protein_coding
description:
  Putative cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: PBPRA3212
symbol: BFL145
gene_biotype: protein_coding
description:
  Putative cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: PBPRA3213
symbol: C0111
gene_biotype: protein_coding
description:
  Hypothetical cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly.


ensembl_gene_id: PBPRA3215
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: PBPRA3216
symbol: STY0147
gene_biotype: protein_coding
description:
  Putative cell division protein FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily.


ensembl_gene_id: PBPRA3217
symbol: MURD
gene_biotype: protein_coding
description:
  Putative UDP-N-acetylmuramoylalanine-D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: PBPRA3218
symbol: MRAY
gene_biotype: protein_coding
description:
  Putative phospho-N-acetylmuramoyl-pentapeptide-transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: PBPRA3219
symbol: STY0144
gene_biotype: protein_coding
description:
  Hypothetical UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: PBPRA3220
symbol: S0084
gene_biotype: protein_coding
description:
  Putative UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelateligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: PBPRA3221
symbol: PLU3660
gene_biotype: protein_coding
description:
  Putative division protein FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily.


ensembl_gene_id: PBPRA3222
symbol: Y3633
gene_biotype: protein_coding
description:
  Putative cell division protein FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: PBPRA3223
symbol: rsmH
gene_biotype: protein_coding
description:
  Putative S-adenosylmethionine-dependent methyltransferaseinvolved in cell envelope biogenesis; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: PBPRA3226
symbol: T3183
gene_biotype: protein_coding
description:
  Putative methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: PBPRA3227
symbol: VV10589
gene_biotype: protein_coding
description:
  Hypothetical lipoprotein; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1A (PBP1a).


ensembl_gene_id: PBPRA3228
symbol: VV0603
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the UPF0102 family.


ensembl_gene_id: PBPRA3231
symbol: Y0131
gene_biotype: protein_coding
description:
  Putative stringent starvation protein B; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA3232
symbol: T3259
gene_biotype: protein_coding
description:
  Putative stringent starvation protein A; Predicted by orpheus program; predicted by glimmer program; Belongs to the GST superfamily.


ensembl_gene_id: PBPRA3233
symbol: RSC2927
gene_biotype: protein_coding
description:
  Putative ubiquinol--cytochrome c reductase,cytochrome c1; Predicted by orpheus program; predicted by glimmer program.


ensembl_gene_id: PBPRA3234
symbol: XAC2456
gene_biotype: protein_coding
description:
  Putative Ubiquinol-cytochrome c reductase,cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: PBPRA3235
symbol: CV4008
gene_biotype: protein_coding
description:
  Putative ubiquinol-cytochrome c reductase,iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: PBPRA3236
symbol: rpsI
gene_biotype: protein_coding
description:
  Putative 30S ribosomal subunit protein S9; Predicted by orpheus program; predicted by glimmer program; Belongs to the universal ribosomal protein uS9 family.


ensembl_gene_id: PBPRA3237
symbol: RPL13
gene_biotype: protein_coding
description:
  Putative 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: PBPRA3240
symbol: Y0137
gene_biotype: protein_coding
description:
  Putative DegQ serine protease; Predicted by orpheus program; predicted by glimmer program; Belongs to the peptidase S1C family.


ensembl_gene_id: PBPRA3242
symbol: VV0461
gene_biotype: protein_coding
description:
  Putative UDP-N-acetylglucosamine1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: PBPRA3243
symbol: Y0141
gene_biotype: protein_coding
description:
  Putative BolA/YrbA family protein,transcriptional regulator; Predicted by orpheus program; predicted by glimmer program; Belongs to the BolA/IbaG family.


