# geneInfo

ensembl_gene_id: Neut_0001
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids.


ensembl_gene_id: Neut_0002
symbol: Neut_0002
gene_biotype: protein_coding
description:
  DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]


ensembl_gene_id: Neut_0003
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: Neut_0005
symbol: Neut_0005
gene_biotype: protein_coding
description:
  TIGRFAM: Pseudouridine synthase, Rsu; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: neu:NE0005 pseudouridylate synthase; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: Neut_0006
symbol: Neut_0006
gene_biotype: protein_coding
description:
  PFAM: phage integrase family protein; KEGG: xfa:XF1718 phage-related integrase; Belongs to the 'phage' integrase family.


ensembl_gene_id: Neut_0009
symbol: Neut_0009
gene_biotype: protein_coding
description:
  Transcriptional regulator, XRE family protein; PFAM: helix-turn-helix domain protein; KEGG: eba:ebB68 hypothetical protein.


ensembl_gene_id: Neut_0011
symbol: Neut_0011
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rme:Rmet_2400 transcriptional regulator, LysR family.


ensembl_gene_id: Neut_0014
symbol: Neut_0014
gene_biotype: protein_coding
description:
  TIGRFAM: Twin-arginine translocation pathway signal; PFAM: multicopper oxidase, type 2; multicopper oxidase, type 3; KEGG: pol:Bpro_3504 multicopper oxidase, type 3.


ensembl_gene_id: Neut_0017
symbol: Neut_0017
gene_biotype: protein_coding
description:
  Heavy metal sensor signal transduction histidine kinase; Member of a two-component regulatory system.


ensembl_gene_id: Neut_0018
symbol: Neut_0018
gene_biotype: protein_coding
description:
  Two component heavy metal response transcriptional regulator, winged helix family protein; TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sde:Sde_1948 response regulator receiver domain protein (CheY-like).


ensembl_gene_id: Neut_0020
symbol: Neut_0020
gene_biotype: protein_coding
description:
  PFAM: glycosyl hydrolase, BNR repeat-containing protein; KEGG: pol:Bpro_1610 glycosyl hydrolase, BNR repeat.


ensembl_gene_id: Neut_0021
symbol: Neut_0021
gene_biotype: protein_coding
description:
  TIGRFAM: Twin-arginine translocation pathway signal; copper-resistance protein, CopA family; PFAM: multicopper oxidase, type 1; multicopper oxidase, type 2; multicopper oxidase, type 3; KEGG: rme:Rmet_6112 copper-resistance protein CopA.


ensembl_gene_id: Neut_0023
symbol: Neut_0023
gene_biotype: protein_coding
description:
  PFAM: blue (type 1) copper domain protein; KEGG: ppr:PBPRA0981 hypothetical copper tolerance protein.


ensembl_gene_id: Neut_0026
symbol: Neut_0026
gene_biotype: protein_coding
description:
  KEGG: pol:Bpro_1178 heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein.


ensembl_gene_id: Neut_0029
symbol: Neut_0029
gene_biotype: protein_coding
description:
  Transcriptional regulator, MerR family protein; TIGRFAM: mercuric resistence transcriptional repressor protein MerD; SMART: regulatory protein, MerR; KEGG: sty:HCM1.159 putative mercuric resistance operon coregulator.


ensembl_gene_id: Neut_0030
symbol: merA
gene_biotype: protein_coding
description:
  Mercuric reductase; Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0). Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.


ensembl_gene_id: Neut_0032
symbol: merP
gene_biotype: protein_coding
description:
  Mercuric transport protein periplasmic component; Involved in mercury resistance. Acts as a mercury scavenger that specifically binds to a mercuric ion in the periplasm and probably passes it to the cytoplasmic mercuric reductase MerA via the mercuric transport protein MerT.


ensembl_gene_id: Neut_0034
symbol: Neut_0034
gene_biotype: protein_coding
description:
  TIGRFAM: Hg(II)-responsive transcriptional regulator; PFAM: regulatory protein, MerR; KEGG: sty:HCM1.151c putative mercuric resistance operon regulatory protein.


ensembl_gene_id: Neut_0040
symbol: Neut_0040
gene_biotype: protein_coding
description:
  TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bbr:BB4471 two-component response regulator.


ensembl_gene_id: Neut_0042
symbol: mntP
gene_biotype: protein_coding
description:
  Protein of unknown function DUF204; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.


ensembl_gene_id: Neut_0043
symbol: Neut_0043
gene_biotype: protein_coding
description:
  TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: pae:PA1297 probable metal transporter.


ensembl_gene_id: Neut_0048
symbol: Neut_0048
gene_biotype: protein_coding
description:
  PFAM: multicopper oxidase, type 1; multicopper oxidase, type 2; KEGG: lpp:lpp0339 hypothetical protein.


ensembl_gene_id: Neut_0054
symbol: Neut_0054
gene_biotype: protein_coding
description:
  PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: jan:Jann_2398 cytochrome c biogenesis protein, transmembrane protein.


ensembl_gene_id: Neut_0058
symbol: Neut_0058
gene_biotype: protein_coding
description:
  TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: Redoxin domain protein; KEGG: rme:Rmet_2391 periplasmic protein thiol.


ensembl_gene_id: Neut_0059
symbol: Neut_0059
gene_biotype: protein_coding
description:
  TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: rme:Rmet_2390 cytochrome c-type biogenesis protein CcmF.


ensembl_gene_id: Neut_0060
symbol: ccmE
gene_biotype: protein_coding
description:
  CcmE/CycJ protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.


ensembl_gene_id: Neut_0061
symbol: ccmC
gene_biotype: protein_coding
description:
  Heme exporter protein CcmC; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.


ensembl_gene_id: Neut_0062
symbol: Neut_0062
gene_biotype: protein_coding
description:
  Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family.


ensembl_gene_id: Neut_0063
symbol: ccmA
gene_biotype: protein_coding
description:
  Heme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.


ensembl_gene_id: Neut_0065
symbol: Neut_0065
gene_biotype: protein_coding
description:
  Methyltransferase type 11; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: bja:bll8020 putative ubiquinone/menaquinone biosynthesis methyltransferase.


ensembl_gene_id: Neut_0066
symbol: Neut_0066
gene_biotype: protein_coding
description:
  TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: ppu:PP5392 hypothetical protein.


ensembl_gene_id: Neut_0067
symbol: Neut_0067
gene_biotype: protein_coding
description:
  Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: xcv:XCV2336 copper-translocating P-type ATPase.


ensembl_gene_id: Neut_0069
symbol: Neut_0069
gene_biotype: protein_coding
description:
  Relaxase; PFAM: protein of unknown function DUF1528; Relaxase; KEGG: xfa:XF1753 hypothetical protein.


ensembl_gene_id: Neut_0070
symbol: Neut_0070
gene_biotype: protein_coding
description:
  Transcriptional regulator/antitoxin, MazE; PFAM: SpoVT/AbrB domain protein; KEGG: xac:XAC2188 cell growth regulatory protein.


ensembl_gene_id: Neut_0082
symbol: Neut_0082
gene_biotype: protein_coding
description:
  PFAM: Disulphide bond formation protein DsbB; KEGG: rfr:Rfer_0415 disulphide bond formation protein DsbB; Belongs to the DsbB family.


ensembl_gene_id: Neut_0084
symbol: Neut_0084
gene_biotype: protein_coding
description:
  Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: nwi:Nwi_3134 heavy metal translocating P-type ATPase.


ensembl_gene_id: Neut_0104
symbol: Neut_0104
gene_biotype: protein_coding
description:
  PFAM: helicase domain protein; SMART: DEAD/DEAH box helicase domain protein; KEGG: xcv:XCV2386 putative helicase.


ensembl_gene_id: Neut_0115
symbol: Neut_0115
gene_biotype: protein_coding
description:
  TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: bxe:Bxe_A1222 C-5 cytosine-specific DNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.


ensembl_gene_id: Neut_0116
symbol: Neut_0116
gene_biotype: protein_coding
description:
  KEGG: rme:Rmet_2298 DNA topoisomerase III; TIGRFAM: DNA topoisomerase III; PFAM: TOPRIM domain protein; DNA topoisomerase, type IA, central domain protein; DNA topoisomerase, type IA, zn finger domain protein; SMART: DNA topoisomerase I, ATP-binding; DNA topoisomerase I, DNA-binding; Toprim sub domain protein.


ensembl_gene_id: Neut_0117
symbol: Neut_0117
gene_biotype: protein_coding
description:
  PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: eba:ebB77 single-strand DNA-binding protein.


ensembl_gene_id: Neut_0124
symbol: Neut_0124
gene_biotype: protein_coding
description:
  PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: bxe:Bxe_A1230 putative chromosome partitioning protein ParA.


ensembl_gene_id: Neut_0125
symbol: Neut_0125
gene_biotype: protein_coding
description:
  Phage transcriptional regulator, AlpA; PFAM: Prophage CP4-57 regulatory; KEGG: xcv:XCV2415 putative regulatory protein, AlpA family.


ensembl_gene_id: Neut_0127
symbol: Neut_0127
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin, iron-sulfur binding domain protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: Neut_0129
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: Neut_0131
symbol: Neut_0131
gene_biotype: protein_coding
description:
  Exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; KEGG: neu:NE0010 single-stranded-DNA-specific exonuclease.


ensembl_gene_id: Neut_0133
symbol: trpC
gene_biotype: protein_coding
description:
  PFAM: Indole-3-glycerol phosphate synthase; KEGG: neu:NE0012 indole-3-glycerol phosphate synthase; Belongs to the TrpC family.


ensembl_gene_id: Neut_0134
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: Neut_0135
symbol: Neut_0135
gene_biotype: protein_coding
description:
  Anthranilate synthase, component II; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: neu:NE0014 panthranilate synthase component II (glutamine amido-transferase) protein.


ensembl_gene_id: Neut_0136
symbol: Neut_0136
gene_biotype: protein_coding
description:
  Periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: neu:NE0015 sensory transduction histidine kinases.


ensembl_gene_id: Neut_0138
symbol: Neut_0138
gene_biotype: protein_coding
description:
  Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: neu:NE0017 putative transcriptional regulator of two-component regulator protein.


ensembl_gene_id: Neut_0140
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.


ensembl_gene_id: Neut_0144
symbol: Neut_0144
gene_biotype: protein_coding
description:
  PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: nmu:Nmul_A2604 glutathione-dependent formaldehyde-activating, GFA.


ensembl_gene_id: Neut_0145
symbol: nnrE
gene_biotype: protein_coding
description:
  Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...]


ensembl_gene_id: Neut_0150
symbol: Neut_0150
gene_biotype: protein_coding
description:
  Putative plasmid maintenance system antidote protein, XRE family protein; TIGRFAM: addiction module antidote protein, HigA family; KEGG: neu:NE0481 helix-turn-helix motif.


ensembl_gene_id: Neut_0151
symbol: Neut_0151
gene_biotype: protein_coding
description:
  PFAM: plasmid maintenance system killer; KEGG: neu:NE0482 putative proteic killer suppression protein.


ensembl_gene_id: Neut_0152
symbol: Neut_0152
gene_biotype: protein_coding
description:
  ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: neu:NE0483 probable ATPase component ABC-type polysaccharide/polyol phosphate transport system.


ensembl_gene_id: Neut_0155
symbol: Neut_0155
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: bpm:BURPS1710b_3295 WcbJ.


ensembl_gene_id: Neut_0156
symbol: Neut_0156
gene_biotype: protein_coding
description:
  PFAM: NAD-dependent epimerase/dehydratase; polysaccharide biosynthesis protein CapD; Male sterility C-terminal domain; KEGG: cjr:CJE1611 GDP-mannose 4,6-dehydratase.


ensembl_gene_id: Neut_0158
symbol: gmhA
gene_biotype: protein_coding
description:
  Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.


ensembl_gene_id: Neut_0160
symbol: Neut_0160
gene_biotype: protein_coding
description:
  TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: bps:BPSL2793 putative D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase.


ensembl_gene_id: Neut_0165
symbol: cysQ
gene_biotype: protein_coding
description:
  3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.


ensembl_gene_id: Neut_0166
symbol: Neut_0166
gene_biotype: protein_coding
description:
  PFAM: glycosyl transferase, family 2; KEGG: pfl:PFL_5496 glycosyl transferase, group 2 family protein.


ensembl_gene_id: Neut_0167
symbol: Neut_0167
gene_biotype: protein_coding
description:
  TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: neu:NE0490 helix-turn-helix motif.


ensembl_gene_id: Neut_0172
symbol: Neut_0172
gene_biotype: protein_coding
description:
  TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; KEGG: lpf:lpl2847 hypothetical protein.


ensembl_gene_id: Neut_0180
symbol: Neut_0180
gene_biotype: protein_coding
description:
  PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: pol:Bpro_3986 NAD-dependent epimerase/dehydratase.


ensembl_gene_id: Neut_0181
symbol: Neut_0181
gene_biotype: protein_coding
description:
  PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; sterile alpha motif SAM protein; Sterile alpha motif homology 2; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: neu:NE0090 guanylate cyclase:TPR repeat:SAM domain (sterile alpha motif).


ensembl_gene_id: Neut_0182
symbol: Neut_0182
gene_biotype: protein_coding
description:
  PFAM: ABC-1 domain protein; UspA domain protein; KEGG: neu:NE0091 universal stress protein (Usp):ABC1 family.


ensembl_gene_id: Neut_0186
symbol: Neut_0186
gene_biotype: protein_coding
description:
  Polysaccharide biosynthesis protein CapD; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: neu:NE0502 polysaccharide biosynthesis protein CapD type.


ensembl_gene_id: Neut_0187
symbol: Neut_0187
gene_biotype: protein_coding
description:
  PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: neu:NE0047 cytidine and deoxycytidylate deaminase zinc-binding region.


ensembl_gene_id: Neut_0191
symbol: cysS
gene_biotype: protein_coding
description:
  KEGG: neu:NE0043 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: cysteinyl-tRNA synthetase, class Ia; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: Neut_0192
symbol: Neut_0192
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase, cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: Neut_0194
symbol: Neut_0194
gene_biotype: protein_coding
description:
  Thiosulfate sulfurtransferase; SMART: Rhodanese domain protein; KEGG: neu:NE0040 rhodanese/cdc25 fold.


ensembl_gene_id: Neut_0195
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: Neut_0196
symbol: thiC
gene_biotype: protein_coding
description:
  Hydroxymethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.


ensembl_gene_id: Neut_0197
symbol: Neut_0197
gene_biotype: protein_coding
description:
  PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: neu:NE0037 protein-L-isoaspartate O-methyltransferase.


ensembl_gene_id: Neut_0198
symbol: Neut_0198
gene_biotype: protein_coding
description:
  TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: neu:NE0036 outer membrane efflux protein.


ensembl_gene_id: Neut_0200
symbol: Neut_0200
gene_biotype: protein_coding
description:
  Alanine-glyoxylate aminotransferase apoenzyme; PFAM: aminotransferase, class V; KEGG: neu:NE0034 aminotransferase class-V.


ensembl_gene_id: Neut_0201
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent proteinase, Serine peptidase, MEROPS family S16; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: Neut_0202
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: Neut_0203
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: Neut_0204
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: Neut_0205
symbol: Neut_0205
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KEGG: neu:NE0029 short-chain dehydrogenase/reductase (SDR) superfamily.


ensembl_gene_id: Neut_0206
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: Neut_0207
symbol: groS
gene_biotype: protein_coding
description:
  Chaperonin Cpn10; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: Neut_0208
symbol: Neut_0208
gene_biotype: protein_coding
description:
  TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: neu:NE0026 aminotransferase class-III pyridoxal-phosphate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: Neut_0209
symbol: Neut_0209
gene_biotype: protein_coding
description:
  PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: neu:NE0025 metallo-beta-lactamase family protein.


ensembl_gene_id: Neut_0211
symbol: Neut_0211
gene_biotype: protein_coding
description:
  KEGG: neu:NE0023 exodeoxyribonuclease III:exodeoxyribonuclease III xth; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase.


ensembl_gene_id: Neut_0212
symbol: Neut_0212
gene_biotype: protein_coding
description:
  TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; KEGG: neu:NE0022 alanine dehydrogenase; Belongs to the AlaDH/PNT family.


ensembl_gene_id: Neut_0219
symbol: Neut_0219
gene_biotype: protein_coding
description:
  KEGG: neu:NE0049 sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold domain protein; SMART: PAS domain containing protein.


ensembl_gene_id: Neut_0220
symbol: sucC
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase (ADP-forming) beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: Neut_0221
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: Neut_0223
symbol: Neut_0223
gene_biotype: protein_coding
description:
  KEGG: neu:NE0053 D-Ala-D-Ala carboxypeptidase 3 (S13) family; TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13, D-Ala-D-Ala carboxypeptidase C.


ensembl_gene_id: Neut_0225
symbol: Neut_0225
gene_biotype: protein_coding
description:
  PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: neu:NE2277 NAD dependent epimerase/dehydratase family.


ensembl_gene_id: Neut_0226
symbol: Neut_0226
gene_biotype: protein_coding
description:
  PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: neu:NE2276 UDP-glucose/GDP-mannose dehydrogenase family; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: Neut_0227
symbol: Neut_0227
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF6, transmembrane; KEGG: neu:NE2464 integral membrane protein, DUF6.


ensembl_gene_id: Neut_0228
symbol: Neut_0228
gene_biotype: protein_coding
description:
  Succinyldiaminopimelate aminotransferase apoenzyme; PFAM: aminotransferase, class I and II; KEGG: neu:NE2463 hypothetical protein.


ensembl_gene_id: Neut_0229
symbol: dapD
gene_biotype: protein_coding
description:
  KEGG: neu:NE2462 bacterial transferase hexapeptide repeat; TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; PFAM: transferase hexapeptide repeat containing protein; Belongs to the transferase hexapeptide repeat family.


ensembl_gene_id: Neut_0232
symbol: birA
gene_biotype: protein_coding
description:
  biotin--acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.


ensembl_gene_id: Neut_0233
symbol: coaX
gene_biotype: protein_coding
description:
  Putative transcriptional acitvator, Baf family protein; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis; Belongs to the type III pantothenate kinase family.


ensembl_gene_id: Neut_0234
symbol: engB
gene_biotype: protein_coding
description:
  Cell division checkpoint GTPase YihA; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: Neut_0235
symbol: Neut_0235
gene_biotype: protein_coding
description:
  Porphobilinogen synthase; PFAM: delta-aminolevulinic acid dehydratase; KEGG: neu:NE2457 delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.


ensembl_gene_id: Neut_0236
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: Neut_0237
symbol: Neut_0237
gene_biotype: protein_coding
description:
  TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: neu:NE1000 phosphate permease component of ATP-dependent phosphate uptake system; TC 3.A.1.7.1.


ensembl_gene_id: Neut_0238
symbol: Neut_0238
gene_biotype: protein_coding
description:
  Phosphate ABC transporter membrane protein 1, PhoT family; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: Neut_0240
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: Neut_0241
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: Neut_0242
symbol: ftsQ
gene_biotype: protein_coding
description:
  Cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly.


ensembl_gene_id: Neut_0246
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: Neut_0247
symbol: ftsW
gene_biotype: protein_coding
description:
  Cell division-specific peptidoglycan biosynthesis regulator FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily.


ensembl_gene_id: Neut_0248
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: Neut_0249
symbol: mraY
gene_biotype: protein_coding
description:
  Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: Neut_0250
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: Neut_0251
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: Neut_0252
symbol: ftsI
gene_biotype: protein_coding
description:
  Peptidoglycan synthetase FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum.


ensembl_gene_id: Neut_0253
symbol: ftsL
gene_biotype: protein_coding
description:
  Cell division protein FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: Neut_0254
symbol: rsmH
gene_biotype: protein_coding
description:
  S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: Neut_0255
symbol: mraZ
gene_biotype: protein_coding
description:
  TIGRFAM: MraZ protein; PFAM: protein of unknown function UPF0040; KEGG: neu:NE0982 domain of unknown function UPF0040; Belongs to the MraZ family.


ensembl_gene_id: Neut_0257
symbol: Neut_0257
gene_biotype: protein_coding
description:
  Transcriptional antiterminator, Rof; PFAM: Modulator of Rho-dependent transcription termination; KEGG: neu:NE0186 hypothetical protein.


ensembl_gene_id: Neut_0259
symbol: nudJ
gene_biotype: protein_coding
description:
  PFAM: NUDIX hydrolase; KEGG: neu:NE0184 NUDIX hydrolase; Belongs to the Nudix hydrolase family. NudJ subfamily.


ensembl_gene_id: Neut_0260
symbol: Neut_0260
gene_biotype: protein_coding
description:
  Putative (U92432) ORF4 (Nitrosospira sp, NpAV); KEGG: neu:NE0183 possible (U92432) ORF4 [Nitrosospira sp. NpAV].


ensembl_gene_id: Neut_0261
symbol: Neut_0261
gene_biotype: protein_coding
description:
  Phospholipid-binding protein, PBP family; TIGRFAM: YbhB and YbcL; PFAM: PEBP family protein; KEGG: neu:NE0182 hypothetical protein.


ensembl_gene_id: Neut_0262
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: Neut_0263
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: Neut_0265
symbol: gpmA
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.


ensembl_gene_id: Neut_0271
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.


ensembl_gene_id: Neut_0272
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: Neut_0273
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase F0, B subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: Neut_0274
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family.


ensembl_gene_id: Neut_0275
symbol: atpA1
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: Neut_0276
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: Neut_0277
symbol: atpD1
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: Neut_0278
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: Neut_0279
symbol: glmU
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. In the C-terminal section; belongs to the transferase hexapeptide repeat family.


ensembl_gene_id: Neut_0280
symbol: glmS
gene_biotype: protein_coding
description:
  Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: Neut_0282
symbol: ruvC
gene_biotype: protein_coding
description:
  Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: Neut_0283
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: Neut_0284
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: Neut_0285
symbol: Neut_0285
gene_biotype: protein_coding
description:
  TIGRFAM: 4-hydroxybenzoyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: neu:NE0214 4-hydroxybenzoyl-CoA thioesterase family active site.


ensembl_gene_id: Neut_0286
symbol: tolQ
gene_biotype: protein_coding
description:
  Cell division and transport-associated protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: Neut_0287
symbol: Neut_0287
gene_biotype: protein_coding
description:
  Cell division and transport-associated protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: neu:NE0216 biopolymer transport protein ExbD/TolR; TC 2.C.1.2.1.


ensembl_gene_id: Neut_0288
symbol: Neut_0288
gene_biotype: protein_coding
description:
  Cell division and transport-associated protein TolA; KEGG: neu:NE0217 proline-rich region; TC 2.C.1.2.1.


ensembl_gene_id: Neut_0289
symbol: tolB
gene_biotype: protein_coding
description:
  TolB, N-terminal domain protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: Neut_0290
symbol: pal
gene_biotype: protein_coding
description:
  OmpA/MotB domain protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: Neut_0291
symbol: cpoB
gene_biotype: protein_coding
description:
  Tetratricopeptide TPR_2 repeat protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.


ensembl_gene_id: Neut_0292
symbol: queE
gene_biotype: protein_coding
description:
  Radical SAM domain protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: Neut_0293
symbol: queC
gene_biotype: protein_coding
description:
  preQ(0) biosynthesis protein QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.


ensembl_gene_id: Neut_0295
symbol: plsY
gene_biotype: protein_coding
description:
  Acyl-phosphate glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: Neut_0296
symbol: tsaD
gene_biotype: protein_coding
description:
  O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: Neut_0297
symbol: rpsU
gene_biotype: protein_coding
description:
  PFAM: ribosomal protein S21; KEGG: neu:NE0226 ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.


ensembl_gene_id: Neut_0299
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: Neut_0300
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: Neut_0302
symbol: Neut_0302
gene_biotype: protein_coding
description:
  PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: neu:NE1312 cold-shock DNA-binding domain.


ensembl_gene_id: Neut_0307
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: Neut_0308
symbol: rph
gene_biotype: protein_coding
description:
  RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: Neut_0309
symbol: Neut_0309
gene_biotype: protein_coding
description:
  Non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family protein; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: Neut_0310
symbol: Neut_0310
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase, anaerobic; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: Neut_0311
symbol: Neut_0311
gene_biotype: protein_coding
description:
  TIGRFAM: Twin-arginine translocation pathway signal; copper-resistance protein, CopA family; PFAM: multicopper oxidase, type 1; multicopper oxidase, type 2; multicopper oxidase, type 3; KEGG: neu:NE0279 multicopper oxidase type 1.


ensembl_gene_id: Neut_0312
symbol: Neut_0312
gene_biotype: protein_coding
description:
  PFAM: copper resistance B precursor; KEGG: neu:NE0280 possible copper resistance protein B precursor.


ensembl_gene_id: Neut_0315
symbol: Neut_0315
gene_biotype: protein_coding
description:
  ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: neu:NE0477 ATPase components of ABC transporters with duplicated ATPase domains.


ensembl_gene_id: Neut_0318
symbol: Neut_0318
gene_biotype: protein_coding
description:
  Kef-type potassium/proton antiporter, CPA2 family; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: noc:Noc_2952 sodium/hydrogen exchanger, TrkA-N; TC 2.A.37.1; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: Neut_0320
symbol: Neut_0320
gene_biotype: protein_coding
description:
  Methyltransferase type 11; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: hch:HCH_02988 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benz oquinol methylase.


ensembl_gene_id: Neut_0321
symbol: Neut_0321
gene_biotype: protein_coding
description:
  Phosphate ABC transporter membrane protein 2, PhoT family; KEGG: noc:Noc_0582 phosphate transport system permease protein 2; TC 3.A.1.7.1.


ensembl_gene_id: Neut_0322
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: Neut_0323
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole-phosphate synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: Neut_0328
symbol: Neut_0328
gene_biotype: protein_coding
description:
  Cardiolipin synthetase 2; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.


ensembl_gene_id: Neut_0333
symbol: Neut_0333
gene_biotype: protein_coding
description:
  KEGG: oih:OB2438 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: Neut_0334
symbol: Neut_0334
gene_biotype: protein_coding
description:
  Putative flagella basal body P-ring formation protein; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.


ensembl_gene_id: Neut_0335
symbol: Neut_0335
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: Neut_0336
symbol: Neut_0336
gene_biotype: protein_coding
description:
  TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: neu:NE0303 flagella basal body rod protein; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: Neut_0337
symbol: Neut_0337
gene_biotype: protein_coding
description:
  Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.


ensembl_gene_id: Neut_0338
symbol: Neut_0338
gene_biotype: protein_coding
description:
  PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: neu:NE0305 flagella basal body rod protein.


ensembl_gene_id: Neut_0339
symbol: Neut_0339
gene_biotype: protein_coding
description:
  TIGRFAM: flagellar basal-body rod protein FlgF; PFAM: flagellar basal body rod protein; KEGG: neu:NE0306 flagella basal body rod protein; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: Neut_0340
symbol: Neut_0340
gene_biotype: protein_coding
description:
  TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: neu:NE0307 flagella basal body rod protein; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: Neut_0341
symbol: flgH
gene_biotype: protein_coding
description:
  Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: Neut_0342
symbol: flgI
gene_biotype: protein_coding
description:
  Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: Neut_0343
symbol: Neut_0343
gene_biotype: protein_coding
description:
  Flagellar rod assembly protein/muramidase FlgJ; KEGG: neu:NE0310 mannosyl-glycoprotein endo-beta-N-acetylglucosamidases; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2.


ensembl_gene_id: Neut_0344
symbol: flgK
gene_biotype: protein_coding
description:
  TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: neu:NE0311 flagella basal body rod protein.


ensembl_gene_id: Neut_0345
symbol: Neut_0345
gene_biotype: protein_coding
description:
  TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: neu:NE0312 flagellin, N-terminus.


ensembl_gene_id: Neut_0350
symbol: Neut_0350
gene_biotype: protein_coding
description:
  Fe(II) trafficking protein YggX; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes.


ensembl_gene_id: Neut_0351
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: Neut_0352
symbol: Neut_0352
gene_biotype: protein_coding
description:
  PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: aba:Acid345_0223 sulphate transporter.


ensembl_gene_id: Neut_0356
symbol: Neut_0356
gene_biotype: protein_coding
description:
  PFAM: membrane-bound metal-dependent hydrolase; KEGG: noc:Noc_0104 membrane-bound metal-dependent hydrolase.


ensembl_gene_id: Neut_0372
symbol: Neut_0372
gene_biotype: protein_coding
description:
  PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: neu:NE2126 glycolate oxidase, (S)-2-hydroxy-acid oxidase, peroxisomal.


ensembl_gene_id: Neut_0373
symbol: Neut_0373
gene_biotype: protein_coding
description:
  PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase, alpha subunit; KEGG: neu:NE2125 putative hydroxylase.


ensembl_gene_id: Neut_0374
symbol: Neut_0374
gene_biotype: protein_coding
description:
  TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: neu:NE2124 TonB-dependent receptor protein.


ensembl_gene_id: Neut_0380
symbol: Neut_0380
gene_biotype: protein_coding
description:
  KEGG: neu:NE1982 deoxyguanosinetriphosphate triphosphohydrolase-like protein; TIGRFAM: putative deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; Belongs to the dGTPase family. Type 2 subfamily.


ensembl_gene_id: Neut_0381
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.


ensembl_gene_id: Neut_0382
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: Neut_0384
symbol: Neut_0384
gene_biotype: protein_coding
description:
  KEGG: neu:NE1978 DNA polymerase III (alpha chain) protein; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP C-terminal domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type; SMART: phosphoesterase PHP domain protein.


ensembl_gene_id: Neut_0386
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: Neut_0387
symbol: Neut_0387
gene_biotype: protein_coding
description:
  Two component, sigma54 specific, transcriptional regulator, Fis family protein; PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; KEGG: neu:NE1975 nitrogen assimilation regulatory protein.


ensembl_gene_id: Neut_0388
symbol: Neut_0388
gene_biotype: protein_coding
description:
  Multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; KEGG: neu:NE1974 sensory transduction histidine kinase.


ensembl_gene_id: Neut_0391
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: Neut_0392
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: Neut_0396
symbol: Neut_0396
gene_biotype: protein_coding
description:
  KEGG: neu:NE1966 DNA topoisomerase III protein; TIGRFAM: DNA topoisomerase III; PFAM: TOPRIM domain protein; DNA topoisomerase, type IA, central domain protein; SMART: DNA topoisomerase I, ATP-binding; DNA topoisomerase I, DNA-binding; Toprim sub domain protein.


ensembl_gene_id: Neut_0398
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: Neut_0400
symbol: Neut_0400
gene_biotype: protein_coding
description:
  SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.


ensembl_gene_id: Neut_0401
symbol: ihfB
gene_biotype: protein_coding
description:
  Integration host factor, beta subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: Neut_0402
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: Neut_0403
symbol: Neut_0403
gene_biotype: protein_coding
description:
  Farnesyl-diphosphate farnesyltransferase; PFAM: Squalene/phytoene synthase; KEGG: neu:NE1958 squalene and phytoene synthase.


ensembl_gene_id: Neut_0404
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: Neut_0407
symbol: Neut_0407
gene_biotype: protein_coding
description:
  PFAM: inositol monophosphatase; KEGG: neu:NE1954 inositol monophosphatase (extragenic suppressor protein).


ensembl_gene_id: Neut_0408
symbol: trmJ
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family, group 1; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.


ensembl_gene_id: Neut_0409
symbol: Neut_0409
gene_biotype: protein_coding
description:
  PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; KEGG: neu:NE1952 putative glutathione S-transferase protein.


ensembl_gene_id: Neut_0410
symbol: Neut_0410
gene_biotype: protein_coding
description:
  KEGG: neu:NE1951 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase C-terminal domain protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.


ensembl_gene_id: Neut_0411
symbol: grpE
gene_biotype: protein_coding
description:
  GrpE protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...]


ensembl_gene_id: Neut_0413
symbol: dnaJ
gene_biotype: protein_coding
description:
  Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]


ensembl_gene_id: Neut_0415
symbol: Neut_0415
gene_biotype: protein_coding
description:
  Transcriptional regulator, TetR family; PFAM: regulatory protein, TetR; KEGG: neu:NE1946 bacterial regulatory proteins, TetR family.


ensembl_gene_id: Neut_0416
symbol: Neut_0416
gene_biotype: protein_coding
description:
  PFAM: HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: neu:NE1945 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.


ensembl_gene_id: Neut_0418
symbol: Neut_0418
gene_biotype: protein_coding
description:
  Alanyl aminopeptidase, Metallo peptidase, MEROPS family M01; TIGRFAM: aminopeptidase N; PFAM: peptidase M1, membrane alanine aminopeptidase; KEGG: neu:NE0626 aminopeptidase N, APN (CD13).


ensembl_gene_id: Neut_0419
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: Neut_0420
symbol: Neut_0420
gene_biotype: protein_coding
description:
  PFAM: response regulator receiver; KEGG: neu:NE1700 diguanylate cyclase/phosphodiesterase domain 2 (EAL).


ensembl_gene_id: Neut_0422
symbol: Neut_0422
gene_biotype: protein_coding
description:
  Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); KEGG: neu:NE1700 diguanylate cyclase/phosphodiesterase domain 2 (EAL); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.


ensembl_gene_id: Neut_0424
symbol: Neut_0424
gene_biotype: protein_coding
description:
  O-acetylhomoserine sulfhydrolase; KEGG: neu:NE1697 Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; aromatic amino acid beta-eliminating lyase/threonine aldolase.


ensembl_gene_id: Neut_0427
symbol: glk
gene_biotype: protein_coding
description:
  Glucokinase; KEGG: neu:NE1694 glucokinase; TIGRFAM: glucokinase; PFAM: Glucokinase; Belongs to the bacterial glucokinase family.


ensembl_gene_id: Neut_0431
symbol: Neut_0431
gene_biotype: protein_coding
description:
  PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: neu:NE1690 haloacid dehalogenase/epoxide hydrolase family.


ensembl_gene_id: Neut_0432
symbol: Neut_0432
gene_biotype: protein_coding
description:
  PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: neu:NE1689 possible epimerase.


ensembl_gene_id: Neut_0433
symbol: Neut_0433
gene_biotype: protein_coding
description:
  PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: neu:NE1688 D-isomer specific 2-hydroxyacid dehydrogenase.


ensembl_gene_id: Neut_0434
symbol: Neut_0434
gene_biotype: protein_coding
description:
  PFAM: HpcH/HpaI aldolase; KEGG: neu:NE1687 putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase protein; Belongs to the HpcH/HpaI aldolase family.


ensembl_gene_id: Neut_0435
symbol: Neut_0435
gene_biotype: protein_coding
description:
  PFAM: acylneuraminate cytidylyltransferase; KEGG: neu:NE1686 3-deoxy-manno-octulosonate cytidylyltransferase.


ensembl_gene_id: Neut_0441
symbol: Neut_0441
gene_biotype: protein_coding
description:
  PFAM: arsenate reductase and related; KEGG: neu:NE1678 putative arsenate reductase; Belongs to the ArsC family.


ensembl_gene_id: Neut_0442
symbol: rplS
gene_biotype: protein_coding
description:
  LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: Neut_0443
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (Guanine37-N(1)-) methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: Neut_0444
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: Neut_0445
symbol: rpsP
gene_biotype: protein_coding
description:
  PFAM: ribosomal protein S16; KEGG: neu:NE1671 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.


ensembl_gene_id: Neut_0446
symbol: Neut_0446
gene_biotype: protein_coding
description:
  PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: neu:NE1670 glycolate oxidase iron-sulfur subunit.


ensembl_gene_id: Neut_0447
symbol: coq7
gene_biotype: protein_coding
description:
  Putative ubiquinone biosynthesis protein; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.


ensembl_gene_id: Neut_0448
symbol: Neut_0448
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF179; KEGG: neu:NE1668 DUF179; Belongs to the UPF0301 (AlgH) family.


ensembl_gene_id: Neut_0449
symbol: Neut_0449
gene_biotype: protein_coding
description:
  Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.


ensembl_gene_id: Neut_0451
symbol: pyrB
gene_biotype: protein_coding
description:
  TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; KEGG: neu:NE1665 aspartate carbamoyltransferase (catalytic chain) protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: Neut_0452
symbol: Neut_0452
gene_biotype: protein_coding
description:
  TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: neu:NE1664 dihydroorotase.


ensembl_gene_id: Neut_0453
symbol: Neut_0453
gene_biotype: protein_coding
description:
  Oligopeptidase A, Metallo peptidase, MEROPS family M03A; PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; KEGG: neu:NE1663 peptidase family M3.


ensembl_gene_id: Neut_0454
symbol: carA
gene_biotype: protein_coding
description:
  TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase, small chain; KEGG: neu:NE1662 carbamoyl-phosphate synthase (small chain) protein; Belongs to the CarA family.


ensembl_gene_id: Neut_0455
symbol: carB
gene_biotype: protein_coding
description:
  TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: protein of unknown function DUF201; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain, oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: neu:NE1661 carbamoyl-phosphate synthase:methylglyoxal synthase-like domain; Belongs to the CarB family.


ensembl_gene_id: Neut_0456
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: Neut_0459
symbol: Neut_0459
gene_biotype: protein_coding
description:
  PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; KEGG: neu:NE1657 hypothetical protein.


ensembl_gene_id: Neut_0461
symbol: Neut_0461
gene_biotype: protein_coding
description:
  Serine palmitoyltransferase; PFAM: aminotransferase, class I and II; KEGG: neu:NE1655 aminotransferase class-I.


ensembl_gene_id: Neut_0462
symbol: Neut_0462
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF152; KEGG: neu:NE1654 DUF152; Belongs to the multicopper oxidase YfiH/RL5 family.


ensembl_gene_id: Neut_0464
symbol: Neut_0464
gene_biotype: protein_coding
description:
  Dolichyl-phosphate beta-D-mannosyltransferase; PFAM: glycosyl transferase, family 2; glycosyl transferase, family 39; GtrA family protein; KEGG: neu:NE1652 possible dolichol monophosphate mannose synthase.


ensembl_gene_id: Neut_0465
symbol: mltG
gene_biotype: protein_coding
description:
  Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: Neut_0466
symbol: Neut_0466
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: Neut_0468
symbol: Neut_0468
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Neut_0469
symbol: Neut_0469
gene_biotype: protein_coding
description:
  [Acyl-carrier-protein] S-malonyltransferase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase domain protein; KEGG: neu:NE1647 malonyl CoA-acyl carrier protein transacylase.


ensembl_gene_id: Neut_0470
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: Neut_0471
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate:acyl-[acyl carrier protein] acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: Neut_0472
symbol: rpmF
gene_biotype: protein_coding
description:
  TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: neu:NE1644 probable 50S ribosomal subunit protein L32; Belongs to the bacterial ribosomal protein bL32 family.


ensembl_gene_id: Neut_0474
symbol: Neut_0474
gene_biotype: protein_coding
description:
  Maf protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes 7- methyl-GTP (m(7)GTP). May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids; Belongs to the Maf family. YceF subfamily.


ensembl_gene_id: Neut_0477
symbol: Neut_0477
gene_biotype: protein_coding
description:
  TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: neu:NE1639 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Neut_0478
symbol: Neut_0478
gene_biotype: protein_coding
description:
  TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: neu:NE1638 acriflavin resistance protein:heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: Neut_0487
symbol: Neut_0487
gene_biotype: protein_coding
description:
  TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: tbd:Tbd_2707 hemolysin-like protein.


ensembl_gene_id: Neut_0491
symbol: Neut_0491
gene_biotype: protein_coding
description:
  Transcriptional regulator, Crp/Fnr family protein; SMART: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: pfl:PFL_4066 transcriptional regulator-related protein.


ensembl_gene_id: Neut_0495
symbol: mtgA
gene_biotype: protein_coding
description:
  Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.


ensembl_gene_id: Neut_0496
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: Neut_0499
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: Neut_0500
symbol: Neut_0500
gene_biotype: protein_coding
description:
  Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.


ensembl_gene_id: Neut_0501
symbol: Neut_0501
gene_biotype: protein_coding
description:
  Glutamate dehydrogenase (NADP); PFAM: Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase, dimerisation region; KEGG: neu:NE1616 glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: Neut_0503
symbol: cca
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases.


ensembl_gene_id: Neut_0504
symbol: Neut_0504
gene_biotype: protein_coding
description:
  PFAM: SMC domain protein; ABC transporter related; SMART: AAA ATPase; KEGG: neu:NE1613 ABC transporter, fused permease and ATPase domains.


ensembl_gene_id: Neut_0505
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: Neut_0506
symbol: Neut_0506
gene_biotype: protein_coding
description:
  TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: neu:NE1611 bacterial general secretion pathway protein G.


ensembl_gene_id: Neut_0507
symbol: Neut_0507
gene_biotype: protein_coding
description:
  PFAM: type II secretion system protein; KEGG: neu:NE1610 bacterial type II secretion system protein.


ensembl_gene_id: Neut_0508
symbol: Neut_0508
gene_biotype: protein_coding
description:
  PFAM: type II secretion system protein E; KEGG: neu:NE1609 bacterial type II secretion system protein E.


ensembl_gene_id: Neut_0513
symbol: Neut_0513
gene_biotype: protein_coding
description:
  PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB, short N-terminal domain; KEGG: neu:NE1604 general (type II) secretion pathway (GSP) D protein; Belongs to the bacterial secretin family.


ensembl_gene_id: Neut_0515
symbol: Neut_0515
gene_biotype: protein_coding
description:
  PFAM: type II secretion system protein G; KEGG: neu:NE1602 bacterial general secretion pathway protein G.


ensembl_gene_id: Neut_0517
symbol: Neut_0517
gene_biotype: protein_coding
description:
  PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: neu:NE1600 TPR repeat.


ensembl_gene_id: Neut_0519
symbol: Neut_0519
gene_biotype: protein_coding
description:
  PFAM: ATPase associated with various cellular activities, AAA_5; CbbQ/NirQ/NorQ C-terminal domain protein; KEGG: neu:NE2005 norQ protein.


ensembl_gene_id: Neut_0520
symbol: Neut_0520
gene_biotype: protein_coding
description:
  Nitric oxide reductase, NorB subunit apoprotein; PFAM: cytochrome c oxidase, subunit I; KEGG: neu:NE2004 cytochrome c oxidase, subunit I; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: Neut_0522
symbol: kup
gene_biotype: protein_coding
description:
  Potassium transporter; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family.


ensembl_gene_id: Neut_0525
symbol: Neut_0525
gene_biotype: protein_coding
description:
  TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; KEGG: bxe:Bxe_B2102 putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains).


ensembl_gene_id: Neut_0526
symbol: Neut_0526
gene_biotype: protein_coding
description:
  HI0933 family protein; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: neu:NE1273 HI0933-like protein.


ensembl_gene_id: Neut_0527
symbol: Neut_0527
gene_biotype: protein_coding
description:
  TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW; Methyltransferase type 11; Methyltransferase type 12; KEGG: neu:NE2187 SAM (and some other nucleotide) binding motif.


ensembl_gene_id: Neut_0528
symbol: metXS
gene_biotype: protein_coding
description:
  Homoserine O-acetyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine.


ensembl_gene_id: Neut_0529
symbol: Neut_0529
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate--protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: Neut_0530
symbol: Neut_0530
gene_biotype: protein_coding
description:
  TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: neu:NE2184 phosphocarrier HPr protein.


ensembl_gene_id: Neut_0531
symbol: Neut_0531
gene_biotype: protein_coding
description:
  PFAM: PTS system fructose subfamily IIA component; KEGG: neu:NE2183 PTS system, unknown pentitol phosphotransferase enzyme IIA component.


ensembl_gene_id: Neut_0532
symbol: Neut_0532
gene_biotype: protein_coding
description:
  Phosphoesterase, PA-phosphatase-related protein; PFAM: phosphoesterase, PA-phosphatase related; KEGG: pcr:Pcryo_1246 phosphoesterase, PA-phosphatase related.


ensembl_gene_id: Neut_0535
symbol: Neut_0535
gene_biotype: protein_coding
description:
  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; KEGG: neu:NE2182 N-acetylmuramoyl-L-alanine amidase (family 2).


ensembl_gene_id: Neut_0536
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: Neut_0537
symbol: Neut_0537
gene_biotype: protein_coding
description:
  Type I site-specific deoxyribonuclease, HsdR family protein; Subunit R is required for both nuclease and ATPase activities, but not for modification.


ensembl_gene_id: Neut_0540
symbol: Neut_0540
gene_biotype: protein_coding
description:
  PFAM: restriction modification system DNA specificity domain; KEGG: neu:NE0384 restriction modification system, type I.


ensembl_gene_id: Neut_0542
symbol: Neut_0542
gene_biotype: protein_coding
description:
  Transporter, NhaC family; PFAM: Na+/H+ antiporter NhaC; KEGG: neu:NE0601 Na+/H+ antiporter NhaC; TC 2.A.35.


ensembl_gene_id: Neut_0543
symbol: Neut_0543
gene_biotype: protein_coding
description:
  TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: neu:NE2180 putative DNA polymerase III (delta' subunit) protein.


ensembl_gene_id: Neut_0545
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: Neut_0548
symbol: Neut_0548
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.


ensembl_gene_id: Neut_0554
symbol: rpsG
gene_biotype: protein_coding
description:
  SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: Neut_0555
symbol: fusA
gene_biotype: protein_coding
description:
  Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...]


ensembl_gene_id: Neut_0556
symbol: tuf1
gene_biotype: protein_coding
description:
  Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: Neut_0557
symbol: rpsJ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: Neut_0558
symbol: rplC
gene_biotype: protein_coding
description:
  LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.


ensembl_gene_id: Neut_0559
symbol: rplD
gene_biotype: protein_coding
description:
  LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.


ensembl_gene_id: Neut_0560
symbol: rplW
gene_biotype: protein_coding
description:
  LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: Neut_0561
symbol: rplB
gene_biotype: protein_coding
description:
  LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: Neut_0562
symbol: rpsS
gene_biotype: protein_coding
description:
  SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: Neut_0563
symbol: rplV
gene_biotype: protein_coding
description:
  LSU ribosomal protein L22P; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity).


ensembl_gene_id: Neut_0564
symbol: rpsC
gene_biotype: protein_coding
description:
  SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: Neut_0565
symbol: rplP
gene_biotype: protein_coding
description:
  LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: Neut_0567
symbol: rpsQ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: Neut_0568
symbol: rplN
gene_biotype: protein_coding
description:
  LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: Neut_0569
symbol: rplX
gene_biotype: protein_coding
description:
  LSU ribosomal protein L24P; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.


ensembl_gene_id: Neut_0570
symbol: rplE
gene_biotype: protein_coding
description:
  LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: Neut_0571
symbol: rpsN
gene_biotype: protein_coding
description:
  SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.


ensembl_gene_id: Neut_0572
symbol: rpsH
gene_biotype: protein_coding
description:
  SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: Neut_0573
symbol: rplF
gene_biotype: protein_coding
description:
  LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: Neut_0574
symbol: rplR
gene_biotype: protein_coding
description:
  LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: Neut_0575
symbol: rpsE
gene_biotype: protein_coding
description:
  SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: Neut_0577
symbol: rplO
gene_biotype: protein_coding
description:
  LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: Neut_0578
symbol: secY
gene_biotype: protein_coding
description:
  Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: Neut_0579
symbol: infA
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 1 (bIF-1); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: Neut_0580
symbol: rpsM
gene_biotype: protein_coding
description:
  SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: Neut_0581
symbol: rpsK
gene_biotype: protein_coding
description:
  SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: Neut_0582
symbol: rpsD
gene_biotype: protein_coding
description:
  SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: Neut_0583
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: Neut_0585
symbol: Neut_0585
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function UPF0125; KEGG: neu:NE0428 hypothetical protein; Belongs to the UPF0125 (RnfH) family.


ensembl_gene_id: Neut_0587
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: Neut_0588
symbol: ctaA
gene_biotype: protein_coding
description:
  Cytochrome oxidase assembly; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily.


ensembl_gene_id: Neut_0590
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: Neut_0591
symbol: Neut_0591
gene_biotype: protein_coding
description:
  Conserved hypothetical protein 103; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: Neut_0592
symbol: Neut_0592
gene_biotype: protein_coding
description:
  TIGRFAM: Pseudouridine synthase, Rsu; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: neu:NE0435 possible pseudouridylate synthase family 1; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: Neut_0593
symbol: prmB
gene_biotype: protein_coding
description:
  [LSU ribosomal protein L3P]-glutamine N5-methyltransferase; Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue; Belongs to the protein N5-glutamine methyltransferase family. PrmB subfamily.


ensembl_gene_id: Neut_0594
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA-adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: Neut_0596
symbol: Neut_0596
gene_biotype: protein_coding
description:
  Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)); PFAM: malic enzyme domain protein; malic enzyme, NAD-binding; KEGG: neu:NE0438 putative malate oxidoreductase (malic enzyme).


ensembl_gene_id: Neut_0597
symbol: Neut_0597
gene_biotype: protein_coding
description:
  KEGG: neu:NE0439 phosphoserine phosphatase protein; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; Haloacid dehalogenase domain protein hydrolase, type 3.


ensembl_gene_id: Neut_0598
symbol: Neut_0598
gene_biotype: protein_coding
description:
  TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: neu:NE0440 domain of unknown function, DUF9.


ensembl_gene_id: Neut_0599
symbol: pepA
gene_biotype: protein_coding
description:
  Aminopeptidase A, Metallo peptidase, MEROPS family M17; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: Neut_0600
symbol: Neut_0600
gene_biotype: protein_coding
description:
  PFAM: DNA polymerase III chi subunit, HolC; KEGG: neu:NE0442 putative DNA polymerase III (chi subunit) protein.


ensembl_gene_id: Neut_0602
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: Neut_0603
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: Neut_0607
symbol: Neut_0607
gene_biotype: protein_coding
description:
  Citryl-CoA lyase; PFAM: HpcH/HpaI aldolase; KEGG: neu:NE1809 probable beta subunit of citrate lyase; Belongs to the HpcH/HpaI aldolase family.


ensembl_gene_id: Neut_0609
symbol: pgi
gene_biotype: protein_coding
description:
  PFAM: phosphoglucose isomerase (PGI); KEGG: neu:NE2263 phosphoglucose isomerase (PGI); Belongs to the GPI family.


ensembl_gene_id: Neut_0610
symbol: Neut_0610
gene_biotype: protein_coding
description:
  KEGG: neu:NE2262 beta-ketothiolase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Neut_0611
symbol: hslU
gene_biotype: protein_coding
description:
  Heat shock protein HslVU, ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: Neut_0612
symbol: hslV
gene_biotype: protein_coding
description:
  HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: Neut_0613
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: Neut_0615
symbol: Neut_0615
gene_biotype: protein_coding
description:
  Dihydroneopterin triphosphate pyrophosphatase; PFAM: NUDIX hydrolase; KEGG: neu:NE2253 dATP pyrophosphohydrolase.


ensembl_gene_id: Neut_0616
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: Neut_0618
symbol: Neut_0618
gene_biotype: protein_coding
description:
  Mannose-6-phosphate isomerase, type 2; KEGG: neu:NE2250 putative mannose-1-phosphate guanylyltransferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel domain protein.


ensembl_gene_id: Neut_0619
symbol: Neut_0619
gene_biotype: protein_coding
description:
  PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: neu:NE2249 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: Neut_0623
symbol: Neut_0623
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF520; KEGG: neu:NE2248 hypothetical protein; Belongs to the UPF0234 family.


ensembl_gene_id: Neut_0628
symbol: Neut_0628
gene_biotype: protein_coding
description:
  ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: neu:NE2244 ATPase component ABC-type (unclassified) transport system.


ensembl_gene_id: Neut_0642
symbol: Neut_0642
gene_biotype: protein_coding
description:
  Integral membrane protein TerC; PFAM: CBS domain containing protein; transporter-associated region; Integral membrane protein TerC; KEGG: neu:NE2227 CBS domain.


ensembl_gene_id: Neut_0643
symbol: Neut_0643
gene_biotype: protein_coding
description:
  Lytic transglycosylase, catalytic; PFAM: Sel1 domain protein repeat-containing protein; Lytic transglycosylase, catalytic; KEGG: neu:NE2226 SLT domain.


ensembl_gene_id: Neut_0644
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III / DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: Neut_0645
symbol: Neut_0645
gene_biotype: protein_coding
description:
  Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.


ensembl_gene_id: Neut_0646
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: Neut_0647
symbol: bpt
gene_biotype: protein_coding
description:
  Arginyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.


ensembl_gene_id: Neut_0648
symbol: aat
gene_biotype: protein_coding
description:
  Leucyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: Neut_0651
symbol: mpl
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramate; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate. Belongs to the MurCDEF family. Mpl subfamily.


ensembl_gene_id: Neut_0652
symbol: Neut_0652
gene_biotype: protein_coding
description:
  PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: neu:NE2216 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.


ensembl_gene_id: Neut_0653
symbol: Neut_0653
gene_biotype: protein_coding
description:
  PFAM: NUDIX hydrolase; thiamine monophosphate synthase; KEGG: neu:NE2215 NUDIX hydrolase / thiamine phosphate synthase; Belongs to the Nudix hydrolase family.


ensembl_gene_id: Neut_0654
symbol: Neut_0654
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF815; SMART: AAA ATPase; KEGG: neu:NE2214 AAA ATPase superfamily.


ensembl_gene_id: Neut_0655
symbol: argJ
gene_biotype: protein_coding
description:
  Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: Neut_0657
symbol: Neut_0657
gene_biotype: protein_coding
description:
  Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.


ensembl_gene_id: Neut_0658
symbol: secB
gene_biotype: protein_coding
description:
  Protein translocase subunit secB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.


ensembl_gene_id: Neut_0660
symbol: gpsA
gene_biotype: protein_coding
description:
  PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: neu:NE2208 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: Neut_0661
symbol: Neut_0661
gene_biotype: protein_coding
description:
  Histone family protein DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: Neut_0662
symbol: Neut_0662
gene_biotype: protein_coding
description:
  PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: neu:NE2206 PpiC-type peptidyl-prolyl cis-trans isomerase.


ensembl_gene_id: Neut_0663
symbol: Neut_0663
gene_biotype: protein_coding
description:
  Enoyl-[acyl-carrier-protein] reductase (NADH); PFAM: short-chain dehydrogenase/reductase SDR; KEGG: neu:NE2205 short-chain dehydrogenase/reductase (SDR) superfamily.


ensembl_gene_id: Neut_0664
symbol: Neut_0664
gene_biotype: protein_coding
description:
  PFAM: RNA binding S1 domain protein; SMART: Resolvase, RNase H domain protein fold; KEGG: neu:NE2197 S1 RNA binding domain.


ensembl_gene_id: Neut_0666
symbol: Neut_0666
gene_biotype: protein_coding
description:
  PFAM: Resolvase, N-terminal domain; Resolvase helix-turn-helix domain protein; KEGG: sfx:S2707 resolvase.


ensembl_gene_id: Neut_0669
symbol: Neut_0669
gene_biotype: protein_coding
description:
  PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: sfx:S2710 hypothetical arsenate reductase.


ensembl_gene_id: Neut_0670
symbol: Neut_0670
gene_biotype: protein_coding
description:
  PFAM: Bile acid:sodium symporter; KEGG: sfx:S2711 putative sodium bile acid symporter family protein.


ensembl_gene_id: Neut_0673
symbol: Neut_0673
gene_biotype: protein_coding
description:
  PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: sfx:S2716 putative mating pair formation protein.


ensembl_gene_id: Neut_0677
symbol: Neut_0677
gene_biotype: protein_coding
description:
  Plasmid and phage iteron-binding protein; PFAM: replication C family protein; KEGG: sfx:S2720 putative replication protein C.


ensembl_gene_id: Neut_0679
symbol: Neut_0679
gene_biotype: protein_coding
description:
  Phage transcriptional regulator, AlpA; PFAM: Prophage CP4-57 regulatory; KEGG: sfx:S2722 hypothetical bacteriophage protein.


ensembl_gene_id: Neut_0680
symbol: Neut_0680
gene_biotype: protein_coding
description:
  PFAM: phage integrase family protein; KEGG: sfx:S2723 putative integrase; Belongs to the 'phage' integrase family.


ensembl_gene_id: Neut_0682
symbol: Neut_0682
gene_biotype: protein_coding
description:
  Methyltransferase type 11; PFAM: UbiE/COQ5 methyltransferase; methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: mbo:Mb0862 hypothetical protein.


ensembl_gene_id: Neut_0684
symbol: Neut_0684
gene_biotype: protein_coding
description:
  PFAM: N-acetyltransferase; KEGG: ssn:SSO_1662 putative N-hydroxyarylamine O-acetyltransferase; Belongs to the arylamine N-acetyltransferase family.


ensembl_gene_id: Neut_0685
symbol: Neut_0685
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF6, transmembrane; KEGG: neu:NE2196 integral membrane protein, DUF6.


ensembl_gene_id: Neut_0686
symbol: Neut_0686
gene_biotype: protein_coding
description:
  TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: vch:VC1275 hypothetical protein.


ensembl_gene_id: Neut_0687
symbol: Neut_0687
gene_biotype: protein_coding
description:
  PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: vch:VC1274 hypothetical protein.


ensembl_gene_id: Neut_0688
symbol: Neut_0688
gene_biotype: protein_coding
description:
  Microcin-processing peptidase 1, Unknown type peptidase, MEROPS family U62; PFAM: peptidase U62, modulator of DNA gyrase; KEGG: neu:NE2195 putative modulator of DNA gyrase.


ensembl_gene_id: Neut_0689
symbol: Neut_0689
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF615; KEGG: neu:NE2194 hypothetical protein; Belongs to the UPF0307 family.


ensembl_gene_id: Neut_0691
symbol: Neut_0691
gene_biotype: protein_coding
description:
  KEGG: neu:NE2192 exodeoxyribonuclease III:exodeoxyribonuclease III xth; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase.


ensembl_gene_id: Neut_0692
symbol: Neut_0692
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: neu:NE2191 putative transport transmembrane protein.


ensembl_gene_id: Neut_0694
symbol: Neut_0694
gene_biotype: protein_coding
description:
  PFAM: cytochrome C oxidase subunit IV; KEGG: reu:Reut_A0985 prokaryotic cytochrome c oxidase subunit IV.


ensembl_gene_id: Neut_0695
symbol: Neut_0695
gene_biotype: protein_coding
description:
  PFAM: cytochrome c oxidase, subunit III; KEGG: sbo:SBO_0324 cytochrome o ubiquinol oxidase subunit III.


ensembl_gene_id: Neut_0696
symbol: Neut_0696
gene_biotype: protein_coding
description:
  PFAM: cytochrome c oxidase, subunit I; KEGG: mfa:Mfla_1294 cytochrome-c oxidase; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: Neut_0697
symbol: Neut_0697
gene_biotype: protein_coding
description:
  PFAM: cytochrome c oxidase, subunit II; KEGG: rso:RSc1858 probable transmembrane cytochrome O ubiquinol oxidase (subunit II) oxidoreductase protein.


ensembl_gene_id: Neut_0698
symbol: Neut_0698
gene_biotype: protein_coding
description:
  UDP-glucose pyrophosphorylase; KEGG: dar:Daro_1735 UTP--glucose-1-phosphate uridylyltransferase, bacterial and archaeal type; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase.


ensembl_gene_id: Neut_0703
symbol: Neut_0703
gene_biotype: protein_coding
description:
  PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: neu:NE1548 acyl-CoA dehydrogenase.


ensembl_gene_id: Neut_0706
symbol: Neut_0706
gene_biotype: protein_coding
description:
  PFAM: Pirin domain protein domain protein; Pirin domain protein; KEGG: neu:NE1545 DUF209; Belongs to the pirin family.


ensembl_gene_id: Neut_0707
symbol: Neut_0707
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: neu:NE1544 bacterial regulatory protein, LysR family; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: Neut_0709
symbol: Neut_0709
gene_biotype: protein_coding
description:
  PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: pol:Bpro_3391 oxidoreductase FAD/NAD(P)-binding.


ensembl_gene_id: Neut_0710
symbol: Neut_0710
gene_biotype: protein_coding
description:
  Ferroxidase; PFAM: multicopper oxidase, type 2; multicopper oxidase, type 3; KEGG: neu:NE1543 multicopper oxidase type 1.


ensembl_gene_id: Neut_0714
symbol: Neut_0714
gene_biotype: protein_coding
description:
  Alpha amylase, catalytic region; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: mac:MA3032 alpha-amylase.


ensembl_gene_id: Neut_0716
symbol: Neut_0716
gene_biotype: protein_coding
description:
  TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: neu:NE1540 TonB-dependent receptor protein.


ensembl_gene_id: Neut_0720
symbol: Neut_0720
gene_biotype: protein_coding
description:
  PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: neu:NE1536 TonB-dependent receptor protein.


ensembl_gene_id: Neut_0721
symbol: Neut_0721
gene_biotype: protein_coding
description:
  PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: neu:NE1531 TonB-dependent receptor protein.


ensembl_gene_id: Neut_0724
symbol: Neut_0724
gene_biotype: protein_coding
description:
  PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: neu:NE1528 putative 3-hydroxyacyl-CoA dehydrogenase oxidoreductase protein.


ensembl_gene_id: Neut_0725
symbol: Neut_0725
gene_biotype: protein_coding
description:
  KEGG: neu:NE1527 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Neut_0728
symbol: Neut_0728
gene_biotype: protein_coding
description:
  TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: neu:NE2408 DNA internalization-related competence protein ComEC/Rec2.


ensembl_gene_id: Neut_0729
symbol: flhD
gene_biotype: protein_coding
description:
  Flagellar transcriptional activator, FlhD subunit; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhD family.


ensembl_gene_id: Neut_0730
symbol: flhC
gene_biotype: protein_coding
description:
  Flagellar transcriptional activator, FlhC subunit; Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhC family.


ensembl_gene_id: Neut_0731
symbol: murJ
gene_biotype: protein_coding
description:
  Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: Neut_0733
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: Neut_0734
symbol: clpB
gene_biotype: protein_coding
description:
  ATPase AAA-2 domain protein; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: Neut_0735
symbol: Neut_0735
gene_biotype: protein_coding
description:
  PFAM: ferredoxin-dependent glutamate synthase; KEGG: neu:NE2123 ferredoxin-dependent glutamate synthase; Belongs to the glutamate synthase family.


ensembl_gene_id: Neut_0738
symbol: Neut_0738
gene_biotype: protein_coding
description:
  PFAM: membrane bound O-acyl transferase, MBOAT family protein; KEGG: neu:NE1054 putative alginate O-acetylation protein; Belongs to the membrane-bound acyltransferase family.


ensembl_gene_id: Neut_0740
symbol: Neut_0740
gene_biotype: protein_coding
description:
  PFAM: flagellar hook-length control protein; KEGG: bxe:Bxe_A0161 putative flagellar hook-length control protein.


ensembl_gene_id: Neut_0741
symbol: Neut_0741
gene_biotype: protein_coding
description:
  TIGRFAM: flagellar export protein FliJ; PFAM: flagellar FliJ protein; KEGG: neu:NE2087 flagellar FliJ protein.


ensembl_gene_id: Neut_0742
symbol: Neut_0742
gene_biotype: protein_coding
description:
  KEGG: neu:NE2086 flagellar ATP synthase; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; H+-transporting two-sector ATPase, alpha/beta subunit domain protein; SMART: AAA ATPase.


ensembl_gene_id: Neut_0745
symbol: Neut_0745
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: Neut_0746
symbol: Neut_0746
gene_biotype: protein_coding
description:
  PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; SMART: PAS domain containing protein; KEGG: neu:NE2082 putative two-component sensor.


ensembl_gene_id: Neut_0747
symbol: Neut_0747
gene_biotype: protein_coding
description:
  Two component, sigma54 specific, transcriptional regulator, Fis family protein; PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: neu:NE2081 sigma-54 dependent response regulator.


ensembl_gene_id: Neut_0748
symbol: fliE
gene_biotype: protein_coding
description:
  TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: neu:NE2080 flagellar hook-basal body complex protein FliE.


ensembl_gene_id: Neut_0749
symbol: ycgR
gene_biotype: protein_coding
description:
  YcgR family protein; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)-dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility.


ensembl_gene_id: Neut_0756
symbol: ttcA
gene_biotype: protein_coding
description:
  tRNA s(2)C-32 sulfurtransferase; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.


ensembl_gene_id: Neut_0757
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: Neut_0758
symbol: lipB
gene_biotype: protein_coding
description:
  Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: Neut_0759
symbol: Neut_0759
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF493; KEGG: neu:NE1487 hypothetical protein; Belongs to the UPF0250 family.


ensembl_gene_id: Neut_0760
symbol: Neut_0760
gene_biotype: protein_coding
description:
  Branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase; PFAM: aminotransferase, class IV; KEGG: neu:NE1486 aminotransferase class-IV.


ensembl_gene_id: Neut_0761
symbol: Neut_0761
gene_biotype: protein_coding
description:
  Penicillin-binding protein 6, Serine peptidase, MEROPS family S11; PFAM: beta-lactamase; peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: neu:NE1485 D-alanyl-D-alanine carboxypeptidase 1 (S11) family; Belongs to the peptidase S11 family.


ensembl_gene_id: Neut_0762
symbol: rplM
gene_biotype: protein_coding
description:
  LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: Neut_0763
symbol: rpsI
gene_biotype: protein_coding
description:
  PFAM: ribosomal protein S9; KEGG: neu:NE1483 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.


ensembl_gene_id: Neut_0764
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: Neut_0768
symbol: nadK
gene_biotype: protein_coding
description:
  NAD(+) kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: Neut_0769
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: Neut_0770
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: Neut_0775
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; KEGG: neu:NE1471 putative homoserine kinase protein; TIGRFAM: homoserine kinase; PFAM: aminoglycoside phosphotransferase; Belongs to the pseudomonas-type ThrB family.


ensembl_gene_id: Neut_0777
symbol: Neut_0777
gene_biotype: protein_coding
description:
  PFAM: conserved hypothetical protein 730; KEGG: neu:NE1469 hypothetical protein; Belongs to the LOG family.


ensembl_gene_id: Neut_0778
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: Neut_0779
symbol: Neut_0779
gene_biotype: protein_coding
description:
  PFAM: fatty acid desaturase; KEGG: neu:NE1467 fatty acid desaturase, type 2:fatty acid desaturase, type 1.


ensembl_gene_id: Neut_0780
symbol: rpmG
gene_biotype: protein_coding
description:
  PFAM: ribosomal protein L33; KEGG: neu:NE1466 ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.


ensembl_gene_id: Neut_0781
symbol: rpmB
gene_biotype: protein_coding
description:
  PFAM: ribosomal protein L28; KEGG: neu:NE1465 ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.


ensembl_gene_id: Neut_0782
symbol: Neut_0782
gene_biotype: protein_coding
description:
  PFAM: DNA repair protein RadC; KEGG: neu:NE1464 DNA repair protein radC family; Belongs to the UPF0758 family.


ensembl_gene_id: Neut_0783
symbol: Neut_0783
gene_biotype: protein_coding
description:
  Phosphopantothenate-cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: Neut_0784
symbol: dut
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: Neut_0786
symbol: hppA
gene_biotype: protein_coding
description:
  V-type H(+)-translocating pyrophosphatase; Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force.


ensembl_gene_id: Neut_0787
symbol: pfp
gene_biotype: protein_coding
description:
  Pyrophosphate-dependent phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.


ensembl_gene_id: Neut_0789
symbol: recA
gene_biotype: protein_coding
description:
  RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: Neut_0791
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: Neut_0792
symbol: Neut_0792
gene_biotype: protein_coding
description:
  TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: neu:NE1929 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.


ensembl_gene_id: Neut_0799
symbol: Neut_0799
gene_biotype: protein_coding
description:
  NADH dehydrogenase (quinone); PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); KEGG: nha:Nham_4321 NADH/ubiquinone/plastoquinone (complex I).


ensembl_gene_id: Neut_0803
symbol: Neut_0803
gene_biotype: protein_coding
description:
  PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: nha:Nham_4331 transcriptional regulatory protein, LysR family.


ensembl_gene_id: Neut_0804
symbol: cbbL
gene_biotype: protein_coding
description:
  Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily.


ensembl_gene_id: Neut_0805
symbol: Neut_0805
gene_biotype: protein_coding
description:
  PFAM: ribulose bisphosphate carboxylase, small chain; KEGG: nha:Nham_4333 ribulose bisphosphate carboxylase, small chain.


ensembl_gene_id: Neut_0808
symbol: Neut_0808
gene_biotype: protein_coding
description:
  PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: nha:Nham_4336 ethanolamine utilization protein EutN/carboxysome structural protein CcmL.


ensembl_gene_id: Neut_0809
symbol: Neut_0809
gene_biotype: protein_coding
description:
  PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: nha:Nham_4337 microcompartments protein.


ensembl_gene_id: Neut_0812
symbol: Neut_0812
gene_biotype: protein_coding
description:
  PFAM: Ferritin, Dps family protein; KEGG: tbd:Tbd_2643 bacterioferritin; Belongs to the bacterioferritin family.


ensembl_gene_id: Neut_0814
symbol: Neut_0814
gene_biotype: protein_coding
description:
  Plasmid segregation oscillating ATPase ParF; PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: nha:Nham_4342 cobyrinic acid a,c-diamide synthase.


ensembl_gene_id: Neut_0815
symbol: Neut_0815
gene_biotype: protein_coding
description:
  CbbQ/NirQ/NorQ C-terminal domain protein; PFAM: ATPase associated with various cellular activities, AAA_5; CbbQ/NirQ/NorQ C-terminal domain protein; KEGG: nha:Nham_4344 ATPase associated with various cellular activities, AAA_5.


ensembl_gene_id: Neut_0825
symbol: Neut_0825
gene_biotype: protein_coding
description:
  Farnesyltranstransferase; PFAM: Polyprenyl synthetase; KEGG: neu:NE1915 polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: Neut_0826
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: Neut_0827
symbol: prfA
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 1 (bRF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: Neut_0828
symbol: prmC
gene_biotype: protein_coding
description:
  [protein release factor]-glutamine N5-methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: Neut_0829
symbol: Neut_0829
gene_biotype: protein_coding
description:
  TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: neu:NE1911 glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily.


ensembl_gene_id: Neut_0831
symbol: Neut_0831
gene_biotype: protein_coding
description:
  PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; KEGG: neu:NE1908 possible glutathione S-transferase family protein.


ensembl_gene_id: Neut_0838
symbol: Neut_0838
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF323; Methyltransferase type 11; Methyltransferase type 12; KEGG: neu:NE2401 generic methyltransferase.


ensembl_gene_id: Neut_0841
symbol: Neut_0841
gene_biotype: protein_coding
description:
  PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: neu:NE1574 serine protease, subtilase family; Belongs to the peptidase S8 family.


ensembl_gene_id: Neut_0843
symbol: Neut_0843
gene_biotype: protein_coding
description:
  PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: neu:NE1572 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase.


ensembl_gene_id: Neut_0844
symbol: Neut_0844
gene_biotype: protein_coding
description:
  PFAM: sodium:dicarboxylate symporter; KEGG: neu:NE2141 sodium:dicarboxylate symporter family; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: Neut_0846
symbol: dsbD
gene_biotype: protein_coding
description:
  Protein-disulfide reductase; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily.


ensembl_gene_id: Neut_0849
symbol: Neut_0849
gene_biotype: protein_coding
description:
  PFAM: SH3, type 3 domain protein; SMART: SH3 domain protein domain protein; KEGG: neu:NE2386 bacterial SH3 domain homologue.


ensembl_gene_id: Neut_0851
symbol: Neut_0851
gene_biotype: protein_coding
description:
  ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: neu:NE2384 ATPase component Uncharacterized ABC-type transport system.


ensembl_gene_id: Neut_0856
symbol: Neut_0856
gene_biotype: protein_coding
description:
  ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: neu:NE2379 ATPase component ABC-type multidrug transport system.


ensembl_gene_id: Neut_0859
symbol: Neut_0859
gene_biotype: protein_coding
description:
  2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: Neut_0860
symbol: Neut_0860
gene_biotype: protein_coding
description:
  KEGG: neu:NE2374 transketolase:dehydrogenase, E1 component; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: dehydrogenase, E1 component; Transketolase, central region.


ensembl_gene_id: Neut_0861
symbol: Neut_0861
gene_biotype: protein_coding
description:
  KEGG: neu:NE2373 citrate synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; Belongs to the citrate synthase family.


ensembl_gene_id: Neut_0863
symbol: Neut_0863
gene_biotype: protein_coding
description:
  KEGG: neu:NE2371 succinate dehydrogenase (iron-sulfur subunit) oxidoreductase protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.


ensembl_gene_id: Neut_0864
symbol: Neut_0864
gene_biotype: protein_coding
description:
  L-threonine synthase; KEGG: neu:NE2370 probable threonine synthase protein; TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit.


ensembl_gene_id: Neut_0865
symbol: Neut_0865
gene_biotype: protein_coding
description:
  PFAM: homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase, NAD-binding; KEGG: neu:NE2369 homoserine dehydrogenase.


ensembl_gene_id: Neut_0868
symbol: Neut_0868
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: Neut_0869
symbol: Neut_0869
gene_biotype: protein_coding
description:
  Protein of unknown function DUF299; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: Neut_0871
symbol: glnS
gene_biotype: protein_coding
description:
  KEGG: neu:NE2363 glutaminyl-tRNA synthetase; TIGRFAM: glutaminyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase, class Ic.


ensembl_gene_id: Neut_0872
symbol: lysS
gene_biotype: protein_coding
description:
  TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase, class II (D, K and N); nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: neu:NE2355 putative lysyl-tRNA synthetase protein; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: Neut_0876
symbol: Neut_0876
gene_biotype: protein_coding
description:
  PFAM: NADPH-dependent FMN reductase; flavodoxin/nitric oxide synthase; KEGG: bld:BLi02026 putative Trp repressor binding protein; Belongs to the WrbA family.


ensembl_gene_id: Neut_0881
symbol: Neut_0881
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: mst:Msp_0714 predicted short chain dehydrogenase.


ensembl_gene_id: Neut_0882
symbol: Neut_0882
gene_biotype: protein_coding
description:
  Transcriptional regulator, TraR/DksA family protein; KEGG: noc:Noc_2010 C4-type zinc finger protein, DksA/TraR family.


ensembl_gene_id: Neut_0889
symbol: Neut_0889
gene_biotype: protein_coding
description:
  PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: neu:NE1807 putative ATP-dependent RNA helicase protein; Belongs to the DEAD box helicase family.


ensembl_gene_id: Neut_0890
symbol: Neut_0890
gene_biotype: protein_coding
description:
  ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: neu:NE1806 ATPase components of ABC transporters with duplicated ATPase domains.


ensembl_gene_id: Neut_0891
symbol: Neut_0891
gene_biotype: protein_coding
description:
  PFAM: polysaccharide export protein; KEGG: neu:NE1805 putative polysaccharide export protein, outer membrane.


ensembl_gene_id: Neut_0893
symbol: Neut_0893
gene_biotype: protein_coding
description:
  Putative capsular polysaccharide biosynthetic protein-like protein; KEGG: neu:NE1803 possible similar to capsular polysaccharide biosynthesis.


ensembl_gene_id: Neut_0901
symbol: Neut_0901
gene_biotype: protein_coding
description:
  KEGG: neu:NE1795 glutamine amidotransferase class-II:asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase, class-II; asparagine synthase.


ensembl_gene_id: Neut_0904
symbol: Neut_0904
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: neu:NE1792 hypothetical protein.


ensembl_gene_id: Neut_0907
symbol: Neut_0907
gene_biotype: protein_coding
description:
  PFAM: peptidyl-tRNA hydrolase; Mur ligase, middle domain protein; KEGG: pca:Pcar_0169 UDP-N-acetylmuramyl pentapeptide synthase-like.


ensembl_gene_id: Neut_0909
symbol: Neut_0909
gene_biotype: protein_coding
description:
  PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: nmu:Nmul_A0292 polysaccharide biosynthesis protein.


ensembl_gene_id: Neut_0914
symbol: Neut_0914
gene_biotype: protein_coding
description:
  PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: neu:NE1785 low molecular weight phosphotyrosine protein phosphatase.


ensembl_gene_id: Neut_0915
symbol: Neut_0915
gene_biotype: protein_coding
description:
  KEGG: neu:NE1784 ABC transporter, fused permease and ATPase domains; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase.


ensembl_gene_id: Neut_0916
symbol: Neut_0916
gene_biotype: protein_coding
description:
  [sulfur carrier protein ThiS] adenylyltransferase; PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: neu:NE1783 NAD binding site:UBA/THIF-type NAD/FAD binding fold.


ensembl_gene_id: Neut_0917
symbol: Neut_0917
gene_biotype: protein_coding
description:
  Carboxyl-terminal protease; KEGG: neu:NE1782 carboxy-terminal processing protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; Belongs to the peptidase S41A family.


ensembl_gene_id: Neut_0920
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: Neut_0921
symbol: Neut_0921
gene_biotype: protein_coding
description:
  Protein translocase subunit secG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: Neut_0922
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: Neut_0923
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: Neut_0924
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: Neut_0925
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: Neut_0926
symbol: Neut_0926
gene_biotype: protein_coding
description:
  TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; KEGG: neu:NE1773 respiratory-chain NADH dehydrogenase 24 Kd subunit.


ensembl_gene_id: Neut_0927
symbol: Neut_0927
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.


ensembl_gene_id: Neut_0928
symbol: Neut_0928
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.


ensembl_gene_id: Neut_0929
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: Neut_0930
symbol: nuoI
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: Neut_0931
symbol: Neut_0931
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: Neut_0932
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: Neut_0933
symbol: Neut_0933
gene_biotype: protein_coding
description:
  KEGG: neu:NE1766 probable transmembrane NADH dehydrogenase I (chain L) oxidoreductase protein; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I).


ensembl_gene_id: Neut_0934
symbol: Neut_0934
gene_biotype: protein_coding
description:
  KEGG: neu:NE1765 possible transmembrane NADH dehydrogenase I (chain M) oxidoreductase protein; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I).


ensembl_gene_id: Neut_0935
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: Neut_0945
symbol: Neut_0945
gene_biotype: protein_coding
description:
  Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage.


ensembl_gene_id: Neut_0946
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase, NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: Neut_0950
symbol: Neut_0950
gene_biotype: protein_coding
description:
  Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: Neut_0953
symbol: gshB
gene_biotype: protein_coding
description:
  KEGG: neu:NE1295 glutathione synthetase; TIGRFAM: glutathione synthetase; PFAM: glutathione synthetase domain protein; glutathione synthetase, ATP-binding; RimK domain protein ATP-grasp; Belongs to the prokaryotic GSH synthase family.


ensembl_gene_id: Neut_0955
symbol: rplU
gene_biotype: protein_coding
description:
  LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: Neut_0956
symbol: rpmA
gene_biotype: protein_coding
description:
  PFAM: ribosomal protein L27; KEGG: neu:NE1292 ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.


ensembl_gene_id: Neut_0957
symbol: obg
gene_biotype: protein_coding
description:
  GTP1/OBG sub domain protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: Neut_0958
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: Neut_0960
symbol: Neut_0960
gene_biotype: protein_coding
description:
  Periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: neu:NE1288 sensory transduction histidine kinases.


ensembl_gene_id: Neut_0961
symbol: hfq
gene_biotype: protein_coding
description:
  RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: Neut_0962
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: Neut_0966
symbol: hisZ
gene_biotype: protein_coding
description:
  tRNA synthetase, class II (G, H, P and S); Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.


ensembl_gene_id: Neut_0967
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: Neut_0970
symbol: lon-2
gene_biotype: protein_coding
description:
  ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: Neut_0971
symbol: Neut_0971
gene_biotype: protein_coding
description:
  PFAM: CBS domain containing protein; KEGG: nmu:Nmul_A1169 putative signal-transduction protein with CBS domains.


ensembl_gene_id: Neut_0973
symbol: Neut_0973
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF214; KEGG: mca:MCA1808 ABC-transporter permease protein, putative.


ensembl_gene_id: Neut_0974
symbol: Neut_0974
gene_biotype: protein_coding
description:
  ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mca:MCA1809 ABC transporter, ATP-binding protein.


ensembl_gene_id: Neut_0976
symbol: Neut_0976
gene_biotype: protein_coding
description:
  Sodium/proton antiporter, CPA1 family; PFAM: sodium/hydrogen exchanger; KEGG: pae:PA3739 probable sodium/hydrogen antiporter; TC 2.A.36.


ensembl_gene_id: Neut_0987
symbol: Neut_0987
gene_biotype: protein_coding
description:
  TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: neu:NE2037 putative cation-efflux system signal peptide protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Neut_0988
symbol: Neut_0988
gene_biotype: protein_coding
description:
  PFAM: acriflavin resistance protein; KEGG: neu:NE2036 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: Neut_0989
symbol: Neut_0989
gene_biotype: protein_coding
description:
  PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: aba:Acid345_4079 alpha amylase.


ensembl_gene_id: Neut_0990
symbol: Neut_0990
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KEGG: neu:NE1215 short-chain dehydrogenase/reductase (SDR) superfamily.


ensembl_gene_id: Neut_0991
symbol: Neut_0991
gene_biotype: protein_coding
description:
  PFAM: transferase hexapeptide repeat containing protein; KEGG: neu:NE1207 bacterial transferase hexapeptide repeat.


ensembl_gene_id: Neut_0992
symbol: Neut_0992
gene_biotype: protein_coding
description:
  PFAM: glutathione peroxidase; KEGG: neu:NE1206 glutathione peroxidase; Belongs to the glutathione peroxidase family.


ensembl_gene_id: Neut_0993
symbol: Neut_0993
gene_biotype: protein_coding
description:
  TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG); KEGG: nmu:Nmul_A1264 DNA-3-methyladenine glycosylase; Belongs to the DNA glycosylase MPG family.


ensembl_gene_id: Neut_0994
symbol: Neut_0994
gene_biotype: protein_coding
description:
  Putative signal transduction protein with CBS domains; PFAM: CBS domain containing protein; KEGG: neu:NE0524 CBS domain.


ensembl_gene_id: Neut_0995
symbol: Neut_0995
gene_biotype: protein_coding
description:
  Putative signal transduction protein with CBS domains; PFAM: CBS domain containing protein; KEGG: neu:NE0525 CBS domain.


ensembl_gene_id: Neut_0996
symbol: Neut_0996
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function UPF0044; KEGG: neu:NE0526 putative RNA-binding protein containing KH domain.


ensembl_gene_id: Neut_0997
symbol: rlmE
gene_biotype: protein_coding
description:
  23S rRNA Um-2552 2'-O-methyltransferase; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.


ensembl_gene_id: Neut_0998
symbol: ftsH
gene_biotype: protein_coding
description:
  Membrane protease FtsH catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: Neut_0999
symbol: Neut_0999
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: Neut_1000
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: Neut_1001
symbol: Neut_1001
gene_biotype: protein_coding
description:
  Phosphate ABC transporter substrate-binding protein, PhoT family; TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: neu:NE0531 phosphate-binding protein; TC 3.A.1.7.1.


ensembl_gene_id: Neut_1002
symbol: cysG
gene_biotype: protein_coding
description:
  Precorrin-2 dehydrogenase / uroporphyrinogen-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.


ensembl_gene_id: Neut_1003
symbol: Neut_1003
gene_biotype: protein_coding
description:
  PFAM: SirA family protein; KEGG: ypm:YP0430 predicted redox protein, regulator of disulfide bond formation; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: Neut_1004
symbol: Neut_1004
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF395, YeeE/YedE; KEGG: sfx:S2068 putative transport system permease protein.


ensembl_gene_id: Neut_1006
symbol: Neut_1006
gene_biotype: protein_coding
description:
  Rossmann fold nucleotide-binding protein-like protein; KEGG: rme:Rmet_1265 conserved hypothetical protein 730.


ensembl_gene_id: Neut_1009
symbol: Neut_1009
gene_biotype: protein_coding
description:
  ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: neu:NE1209 ATPase component ABC-type multidrug transport system.


ensembl_gene_id: Neut_1012
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Cas2 family; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: Neut_1013
symbol: cas1
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Cas1 family; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: Neut_1014
symbol: Neut_1014
gene_biotype: protein_coding
description:
  CRISPR-associated exonuclease, Cas4 family; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.


ensembl_gene_id: Neut_1015
symbol: Neut_1015
gene_biotype: protein_coding
description:
  TIGRFAM: CRISPR-associated protein, CT1132 family; CRISPR-associated protein, Csd2 family; PFAM: CRISPR-associated protein TM1801; KEGG: mca:MCA0654 CRISPR-associated TM1801 family protein.


ensembl_gene_id: Neut_1016
symbol: Neut_1016
gene_biotype: protein_coding
description:
  TIGRFAM: CRISPR-associated protein, Csd1 family; KEGG: mca:MCA0655 CRISPR-associated CT1133 family protein.


ensembl_gene_id: Neut_1019
symbol: Neut_1019
gene_biotype: protein_coding
description:
  PFAM: EAL domain protein; response regulator receiver; KEGG: neu:NE0566 domain of unknown function 2:response regulator receiver domain.


ensembl_gene_id: Neut_1020
symbol: Neut_1020
gene_biotype: protein_coding
description:
  Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.


ensembl_gene_id: Neut_1021
symbol: thyA
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: Neut_1024
symbol: cysA
gene_biotype: protein_coding
description:
  Sulfate ABC transporter, ATPase subunit; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.


ensembl_gene_id: Neut_1025
symbol: Neut_1025
gene_biotype: protein_coding
description:
  TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: neu:NE0577 sulfate transport ABC transporter protein.


ensembl_gene_id: Neut_1026
symbol: Neut_1026
gene_biotype: protein_coding
description:
  Sulfate ABC transporter, inner membrane subunit CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: Neut_1028
symbol: Neut_1028
gene_biotype: protein_coding
description:
  TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: neu:NE0582 prokaryotic sulfate-/thiosulfate-binding protein.


ensembl_gene_id: Neut_1031
symbol: rpoH
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 32 subunit, RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.


ensembl_gene_id: Neut_1035
symbol: Neut_1035
gene_biotype: protein_coding
description:
  PFAM: phage integrase family protein; lipopolysaccharide biosynthesis; KEGG: neu:NE0588 phage integrase:chain length determinant protein.


ensembl_gene_id: Neut_1036
symbol: ppc
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.


ensembl_gene_id: Neut_1037
symbol: hemC
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: Neut_1038
symbol: Neut_1038
gene_biotype: protein_coding
description:
  uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: Neut_1039
symbol: Neut_1039
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF513, hemX; KEGG: neu:NE0592 possible uroporphyrin-III C-methyltransferase.


ensembl_gene_id: Neut_1041
symbol: Neut_1041
gene_biotype: protein_coding
description:
  PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: neu:NE0594 CDP-6-deoxy-delta-3,4-glucoseen reductase.


ensembl_gene_id: Neut_1043
symbol: Neut_1043
gene_biotype: protein_coding
description:
  PFAM: type II secretion system protein; KEGG: neu:NE0596 bacterial type II secretion system protein.


ensembl_gene_id: Neut_1044
symbol: Neut_1044
gene_biotype: protein_coding
description:
  Type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.


ensembl_gene_id: Neut_1045
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: Neut_1046
symbol: zapD
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1342; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity.


ensembl_gene_id: Neut_1047
symbol: yacG
gene_biotype: protein_coding
description:
  Protein of unknown function DUF329; Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C- terminal domain of GyrB, which probably disrupts DNA binding by the gyrase.


ensembl_gene_id: Neut_1048
symbol: argA
gene_biotype: protein_coding
description:
  N-acetylglutamate synthase; TIGRFAM: amino-acid N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; aspartate/glutamate/uridylate kinase; KEGG: neu:NE0778 GCN5-related N-acetyltransferase:aspartokinase superfamily; Belongs to the acetyltransferase family. ArgA subfamily.


ensembl_gene_id: Neut_1049
symbol: Neut_1049
gene_biotype: protein_coding
description:
  Protein of unknown function DUF558; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: Neut_1052
symbol: Neut_1052
gene_biotype: protein_coding
description:
  PFAM: multicopper oxidase, type 2; multicopper oxidase, type 3; KEGG: neu:NE0782 putative periplasmic cell division protein (SufI).


ensembl_gene_id: Neut_1054
symbol: Neut_1054
gene_biotype: protein_coding
description:
  Putative NrfJ; Similar to Wolinella succinogenes NrfJ encoded by GenBank Accession Number AJ245540; KEGG: neu:NE0784 putative (AJ245540) NrfJ [Wolinella succinogenes].


ensembl_gene_id: Neut_1057
symbol: Neut_1057
gene_biotype: protein_coding
description:
  hydroxyneurosporene-O-methyltransferase; PFAM: O-methyltransferase, family 2; KEGG: syf:Synpcc7942_0499 hypothetical protein.


ensembl_gene_id: Neut_1061
symbol: Neut_1061
gene_biotype: protein_coding
description:
  PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sdn:Sden_0899 methyltransferase type 11.


ensembl_gene_id: Neut_1063
symbol: Neut_1063
gene_biotype: protein_coding
description:
  Pyrimidine dimer DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase; KEGG: neu:NE2427 pyrimidine dimer DNA glycosylase.


ensembl_gene_id: Neut_1071
symbol: Neut_1071
gene_biotype: protein_coding
description:
  PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: par:Psyc_0012 probable nuclear receptor binding factor related protein.


ensembl_gene_id: Neut_1072
symbol: Neut_1072
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: pcr:Pcryo_2061 short-chain dehydrogenase/reductase SDR.


ensembl_gene_id: Neut_1073
symbol: Neut_1073
gene_biotype: protein_coding
description:
  6-aminohexanoate-dimer hydrolase; PFAM: beta-lactamase; protein of unknown function DUF306, Meta and HslJ; KEGG: atc:AGR_C_1692 hypothetical protein.


ensembl_gene_id: Neut_1074
symbol: Neut_1074
gene_biotype: protein_coding
description:
  PFAM: Integrase, catalytic region; transposase IS3/IS911 family protein; KEGG: sdn:Sden_3021 integrase, catalytic region.


ensembl_gene_id: Neut_1079
symbol: Neut_1079
gene_biotype: protein_coding
description:
  PFAM: sucrose synthase; glycosyl transferase, group 1; KEGG: neu:NE1214 sucrose synthase:glycosyl transferase group 1.


ensembl_gene_id: Neut_1080
symbol: Neut_1080
gene_biotype: protein_coding
description:
  Sucrose-phosphate synthase; KEGG: neu:NE1213 glycosyl transferase group 1; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; Sucrose phosphate synthase, sucrose phosphatase-like region; sucrose-phosphate synthase; PFAM: glycosyl transferase, group 1; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3.


ensembl_gene_id: Neut_1082
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: Neut_1091
symbol: Neut_1091
gene_biotype: protein_coding
description:
  Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: Neut_1104
symbol: Neut_1104
gene_biotype: protein_coding
description:
  KEGG: neu:NE0803 CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: Neut_1105
symbol: Neut_1105
gene_biotype: protein_coding
description:
  PFAM: diacylglycerol kinase, catalytic region; KEGG: neu:NE0804 DAG-kinase catalytic domain (presumed).


ensembl_gene_id: Neut_1109
symbol: secA
gene_biotype: protein_coding
description:
  Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family.


ensembl_gene_id: Neut_1110
symbol: Neut_1110
gene_biotype: protein_coding
description:
  Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: Neut_1111
symbol: Neut_1111
gene_biotype: protein_coding
description:
  Cytochrome b/b6, N-terminal domain; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: Neut_1113
symbol: Neut_1113
gene_biotype: protein_coding
description:
  PFAM: glutaredoxin; Glutathione S-transferase, N-terminal domain; KEGG: neu:NE0812 putative transcription modulator protein.


ensembl_gene_id: Neut_1117
symbol: dksA
gene_biotype: protein_coding
description:
  Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.


ensembl_gene_id: Neut_1119
symbol: Neut_1119
gene_biotype: protein_coding
description:
  KEGG: neu:NE1846 HD domain; TIGRFAM: metal dependent phophohydrolase; PFAM: HDIG domain protein; SMART: metal-dependent phosphohydrolase, HD region.


ensembl_gene_id: Neut_1125
symbol: Neut_1125
gene_biotype: protein_coding
description:
  PFAM: phage integrase family protein; KEGG: rfr:Rfer_1354 phage integrase; Belongs to the 'phage' integrase family.


ensembl_gene_id: Neut_1127
symbol: ubiD
gene_biotype: protein_coding
description:
  3-octaprenyl-4hydroxybenzoate decarboxylase; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis.


ensembl_gene_id: Neut_1128
symbol: ubiA
gene_biotype: protein_coding
description:
  4-hydroxybenzoate octaprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.


ensembl_gene_id: Neut_1129
symbol: ubiC
gene_biotype: protein_coding
description:
  Chorismate lyase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family.


ensembl_gene_id: Neut_1131
symbol: Neut_1131
gene_biotype: protein_coding
description:
  Cation transporter; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.


ensembl_gene_id: Neut_1132
symbol: Neut_1132
gene_biotype: protein_coding
description:
  PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: neu:NE1834 potassium uptake system NAD-binding component.


ensembl_gene_id: Neut_1135
symbol: minC
gene_biotype: protein_coding
description:
  Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: Neut_1136
symbol: Neut_1136
gene_biotype: protein_coding
description:
  TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: neu:NE1830 ParA family ATPase.


ensembl_gene_id: Neut_1137
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: Neut_1138
symbol: lolB
gene_biotype: protein_coding
description:
  Outer membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.


ensembl_gene_id: Neut_1139
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: Neut_1140
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: Neut_1141
symbol: rplY
gene_biotype: protein_coding
description:
  LSU ribosomal protein L25P; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: Neut_1142
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: Neut_1143
symbol: ychF
gene_biotype: protein_coding
description:
  GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: Neut_1144
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: Neut_1146
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: Neut_1147
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: Neut_1148
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: Neut_1150
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: Neut_1151
symbol: trpF
gene_biotype: protein_coding
description:
  PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: neu:NE0692 N-(5'phosphoribosyl)anthranilate isomerase (PRAI); Belongs to the TrpF family.


ensembl_gene_id: Neut_1152
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: Neut_1153
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: Neut_1154
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: Neut_1155
symbol: Neut_1155
gene_biotype: protein_coding
description:
  TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: neu:NE0696 cytoplasmic peptidoglycan synthetases, C-terminal; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: Neut_1158
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: Neut_1159
symbol: metZ
gene_biotype: protein_coding
description:
  O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.


ensembl_gene_id: Neut_1160
symbol: ilvA
gene_biotype: protein_coding
description:
  L-threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: Neut_1162
symbol: Neut_1162
gene_biotype: protein_coding
description:
  CheA signal transduction histidine kinases; PFAM: response regulator receiver; CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Hpt domain protein; KEGG: neu:NE1250 two-component hybrid sensor and regulator.


ensembl_gene_id: Neut_1163
symbol: Neut_1163
gene_biotype: protein_coding
description:
  TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; KEGG: bur:Bcep18194_A4937 rhs family protein.


ensembl_gene_id: Neut_1164
symbol: Neut_1164
gene_biotype: protein_coding
description:
  2-octaprenylphenol hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily.


ensembl_gene_id: Neut_1167
symbol: Neut_1167
gene_biotype: protein_coding
description:
  CheA signal transduction histidine kinases; PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: neu:NE1866 probable chemotaxis sensor histidine kinase transcription regulator protein.


ensembl_gene_id: Neut_1169
symbol: Neut_1169
gene_biotype: protein_coding
description:
  PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: neu:NE1864 HAMP domain:bacterial chemotaxis sensory transducer.


ensembl_gene_id: Neut_1170
symbol: Neut_1170
gene_biotype: protein_coding
description:
  Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor; KEGG: neu:NE1863 probable chemotaxis transducer; TIGRFAM: PAS sensor protein; PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.


ensembl_gene_id: Neut_1171
symbol: Neut_1171
gene_biotype: protein_coding
description:
  MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.


ensembl_gene_id: Neut_1172
symbol: cheD
gene_biotype: protein_coding
description:
  CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: Neut_1173
symbol: cheB
gene_biotype: protein_coding
description:
  Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: Neut_1175
symbol: Neut_1175
gene_biotype: protein_coding
description:
  PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rieske [2Fe-2S] domain protein; KEGG: neu:NE2303 uncharacterized NAD(FAD)-dependent dehydrogenase.


ensembl_gene_id: Neut_1176
symbol: fbp
gene_biotype: protein_coding
description:
  PFAM: Inositol phosphatase/fructose-1,6-bisphosphatase; KEGG: neu:NE0521 fructose-1,6-bisphosphatase/sedoheptulose-1, 7-bisphosphatase.


ensembl_gene_id: Neut_1177
symbol: Neut_1177
gene_biotype: protein_coding
description:
  PFAM: Glutathione S-transferase, C-terminal domain; KEGG: neu:NE0522 glutathione S-transferase C terminus.


ensembl_gene_id: Neut_1180
symbol: Neut_1180
gene_biotype: protein_coding
description:
  Phosphohistidine phosphatase, SixA; PFAM: Phosphoglycerate mutase; KEGG: neu:NE0848 phosphoglycerate mutase family.


ensembl_gene_id: Neut_1182
symbol: Neut_1182
gene_biotype: protein_coding
description:
  Carboxylesterase; PFAM: phospholipase/Carboxylesterase; KEGG: neu:NE0850 phospholipase/carboxylesterase.


ensembl_gene_id: Neut_1183
symbol: Neut_1183
gene_biotype: protein_coding
description:
  TIGRFAM: Twin-arginine translocation pathway signal; PFAM: transglutaminase domain protein; KEGG: neu:NE0851 transglutaminase-like superfamily.


ensembl_gene_id: Neut_1184
symbol: cysI
gene_biotype: protein_coding
description:
  Sulfite reductase (NADPH) beta subunit; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: Neut_1185
symbol: Neut_1185
gene_biotype: protein_coding
description:
  Sulfite reductase (NADPH) alpha subunit; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component.


ensembl_gene_id: Neut_1186
symbol: Neut_1186
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: neu:NE0854 bacterial regulatory protein, LysR family; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: Neut_1188
symbol: Neut_1188
gene_biotype: protein_coding
description:
  TIGRFAM: sulfate adenylyltransferase, small subunit; PFAM: phosphoadenosine phosphosulfate reductase; KEGG: neu:NE0856 phosphoadenosine phosphosulfate reductase.


ensembl_gene_id: Neut_1189
symbol: Neut_1189
gene_biotype: protein_coding
description:
  Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.


ensembl_gene_id: Neut_1190
symbol: Neut_1190
gene_biotype: protein_coding
description:
  PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: neu:NE0858 hypothetical protein.


ensembl_gene_id: Neut_1191
symbol: Neut_1191
gene_biotype: protein_coding
description:
  NAD(P)(+) transhydrogenase (AB-specific); PFAM: alanine dehydrogenase/PNT domain protein; KEGG: neu:NE0859 alanine dehydrogenase and pyridine nucleotide transhydrogenase.


ensembl_gene_id: Neut_1193
symbol: Neut_1193
gene_biotype: protein_coding
description:
  NAD(P) transhydrogenase, beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.


ensembl_gene_id: Neut_1196
symbol: Neut_1196
gene_biotype: protein_coding
description:
  PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: ilo:IL1065 bacterioferritin-associated ferredoxin.


ensembl_gene_id: Neut_1199
symbol: Neut_1199
gene_biotype: protein_coding
description:
  Diguanylate phosphodiesterase; PFAM: EAL domain protein; PAS fold-4 domain protein; KEGG: neu:NE0865 PAS domain:domain of unknown function 2.


ensembl_gene_id: Neut_1200
symbol: purC
gene_biotype: protein_coding
description:
  KEGG: neu:NE0866 phosphoribosylaminoimidazole-succinocarboxamide synthase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase.


ensembl_gene_id: Neut_1201
symbol: purK
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: Neut_1202
symbol: purE
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: Neut_1203
symbol: Neut_1203
gene_biotype: protein_coding
description:
  PFAM: Biopolymer transport protein ExbD/TolR; KEGG: neu:NE0869 biopolymer transport protein ExbD/TolR.


ensembl_gene_id: Neut_1204
symbol: Neut_1204
gene_biotype: protein_coding
description:
  Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: Neut_1205
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase (homohexameric); Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: Neut_1206
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: Neut_1207
symbol: Neut_1207
gene_biotype: protein_coding
description:
  TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: neu:NE0873 aromatic-ring hydroxylase (flavoprotein monooxygenase).


ensembl_gene_id: Neut_1208
symbol: dusB
gene_biotype: protein_coding
description:
  tRNA-U20-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the Dus family. DusB subfamily.


ensembl_gene_id: Neut_1209
symbol: Neut_1209
gene_biotype: protein_coding
description:
  DNA-binding protein Fis; PFAM: helix-turn-helix, Fis-type; KEGG: neu:NE0875 probable factor-for-inversion-stimulation transcription regulator protein; Belongs to the transcriptional regulatory Fis family.


ensembl_gene_id: Neut_1210
symbol: purH
gene_biotype: protein_coding
description:
  IMP cyclohydrolase; KEGG: neu:NE0876 probable phosphoribosylaminoimidazolecarboxamide formyltransferase and IMP cyclodydrolase transmembrane protein; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme; MGS domain protein.


ensembl_gene_id: Neut_1211
symbol: purD
gene_biotype: protein_coding
description:
  Phosphoribosylamine--glycine ligase; KEGG: neu:NE0877 phosphoribosylglycinamide synthetase; TIGRFAM: phosphoribosylamine--glycine ligase; PFAM: phosphoribosylglycinamide synthetase; Belongs to the GARS family.


ensembl_gene_id: Neut_1216
symbol: lptD
gene_biotype: protein_coding
description:
  Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.


ensembl_gene_id: Neut_1217
symbol: surA
gene_biotype: protein_coding
description:
  PpiC-type peptidyl-prolyl cis-trans isomerase; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation.


ensembl_gene_id: Neut_1218
symbol: pdxA
gene_biotype: protein_coding
description:
  4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).


ensembl_gene_id: Neut_1219
symbol: rsmA
gene_biotype: protein_coding
description:
  Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: Neut_1220
symbol: Neut_1220
gene_biotype: protein_coding
description:
  methylated-DNA--protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: Neut_1221
symbol: Neut_1221
gene_biotype: protein_coding
description:
  DNA-O6-methylguanine--protein-cysteine S-methyltransferase; PFAM: helix-turn-helix- domain containing protein, AraC type; HhH-GPD family protein; Ada, metal-binding domain protein; AlkA domain protein; KEGG: pcu:pc1834 putative DNA-3-methyladenine glycosidase II.


ensembl_gene_id: Neut_1223
symbol: Neut_1223
gene_biotype: protein_coding
description:
  Transcriptional regulator, XRE family protein; SMART: helix-turn-helix domain protein; KEGG: neu:NE0896 helix-turn-helix motif.


ensembl_gene_id: Neut_1227
symbol: Neut_1227
gene_biotype: protein_coding
description:
  Amino acid/polyamine/organocation transporter, APC superfamily; PFAM: amino acid permease-associated region; KEGG: neu:NE0513 amino acid transporter; TC 2.A.3.


ensembl_gene_id: Neut_1229
symbol: bamD
gene_biotype: protein_coding
description:
  TPR repeat; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: Neut_1230
symbol: Neut_1230
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: Neut_1231
symbol: Neut_1231
gene_biotype: protein_coding
description:
  KEGG: neu:NE0504 glutamine synthetase type I, GlnA; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp.


ensembl_gene_id: Neut_1237
symbol: Neut_1237
gene_biotype: protein_coding
description:
  TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: neu:NE1446 NifU-like N terminal domain.


ensembl_gene_id: Neut_1238
symbol: Neut_1238
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.


ensembl_gene_id: Neut_1239
symbol: Neut_1239
gene_biotype: protein_coding
description:
  Iron-regulated ABC transporter permease protein SufD; TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: neu:NE1448 uncharacterized protein family UPF0051.


ensembl_gene_id: Neut_1240
symbol: Neut_1240
gene_biotype: protein_coding
description:
  FeS assembly ATPase SufC; KEGG: neu:NE1449 iron-regulated ABC transporter ATPase subunit SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase.


ensembl_gene_id: Neut_1241
symbol: Neut_1241
gene_biotype: protein_coding
description:
  Iron-regulated ABC transporter membrane component SufB; TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: neu:NE1450 uncharacterized protein family UPF0051.


ensembl_gene_id: Neut_1242
symbol: Neut_1242
gene_biotype: protein_coding
description:
  TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: neu:NE1451 hypothetical HesB/YadR/YfhF family; Belongs to the HesB/IscA family.


ensembl_gene_id: Neut_1243
symbol: Neut_1243
gene_biotype: protein_coding
description:
  TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: neu:NE1452 hypothetical protein.


ensembl_gene_id: Neut_1244
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: Neut_1247
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]


ensembl_gene_id: Neut_1248
symbol: rppH
gene_biotype: protein_coding
description:
  NUDIX hydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.


ensembl_gene_id: Neut_1250
symbol: Neut_1250
gene_biotype: protein_coding
description:
  Periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: neu:NE1314 probable two-component sensor.


ensembl_gene_id: Neut_1251
symbol: Neut_1251
gene_biotype: protein_coding
description:
  PFAM: response regulator receiver; helix-turn-helix, Fis-type; KEGG: neu:NE1313 response regulator receiver domain:helix-turn-helix fis-type.


ensembl_gene_id: Neut_1252
symbol: Neut_1252
gene_biotype: protein_coding
description:
  TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: nmu:Nmul_A1260 TonB-dependent siderophore receptor.


ensembl_gene_id: Neut_1258
symbol: Neut_1258
gene_biotype: protein_coding
description:
  KEGG: neu:NE1321 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: Neut_1259
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase related protein; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: Neut_1260
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: Neut_1261
symbol: Neut_1261
gene_biotype: protein_coding
description:
  TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: neu:NE1324 acetolactate synthase small subunit.


ensembl_gene_id: Neut_1262
symbol: Neut_1262
gene_biotype: protein_coding
description:
  TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: neu:NE1325 acetolactate synthase large subunit.


ensembl_gene_id: Neut_1263
symbol: Neut_1263
gene_biotype: protein_coding
description:
  Microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62; PFAM: peptidase U62, modulator of DNA gyrase; KEGG: neu:NE1326 putative modulator of DNA gyrase.


ensembl_gene_id: Neut_1264
symbol: Neut_1264
gene_biotype: protein_coding
description:
  PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: neu:NE1327 carbon-nitrogen hydrolase.


ensembl_gene_id: Neut_1266
symbol: glnE
gene_biotype: protein_coding
description:
  (Glutamate--ammonia-ligase) adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal tra [...]


ensembl_gene_id: Neut_1267
symbol: Neut_1267
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: neu:NE1390 serine/threonine specific protein phosphatase:Exonuclease SbcD.


ensembl_gene_id: Neut_1270
symbol: Neut_1270
gene_biotype: protein_coding
description:
  Fructosamine kinase; PFAM: aminoglycoside phosphotransferase; fructosamine kinase; KEGG: neu:NE1855 hypothetical protein.


ensembl_gene_id: Neut_1272
symbol: Neut_1272
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF6, transmembrane; KEGG: dar:Daro_2296 protein of unknown function DUF6, transmembrane.


ensembl_gene_id: Neut_1274
symbol: crcB
gene_biotype: protein_coding
description:
  Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: Neut_1275
symbol: Neut_1275
gene_biotype: protein_coding
description:
  Chemotaxis phosphatase, CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).


ensembl_gene_id: Neut_1283
symbol: Neut_1283
gene_biotype: protein_coding
description:
  PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: neu:NE1514 glycine cleavage T-protein (aminomethyl transferase); Belongs to the GcvT family.


ensembl_gene_id: Neut_1285
symbol: Neut_1285
gene_biotype: protein_coding
description:
  TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: neu:NE1516 uncharacterized protein family UPF0006.


ensembl_gene_id: Neut_1286
symbol: Neut_1286
gene_biotype: protein_coding
description:
  PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: neu:NE1517 6-pyruvoyl tetrahydropterin synthase.


ensembl_gene_id: Neut_1289
symbol: Neut_1289
gene_biotype: protein_coding
description:
  TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: xcv:XCV2338 cobalt-zinc-cadmium resistance protein.


ensembl_gene_id: Neut_1291
symbol: glgB
gene_biotype: protein_coding
description:
  1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: Neut_1292
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: Neut_1296
symbol: Neut_1296
gene_biotype: protein_coding
description:
  TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: neu:NE1398 putative DNA polymerase-related protein, bacteriophage-type.


ensembl_gene_id: Neut_1297
symbol: Neut_1297
gene_biotype: protein_coding
description:
  TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: neu:NE1399 GCN5-related N-acetyltransferase.


ensembl_gene_id: Neut_1299
symbol: Neut_1299
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: Neut_1300
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: Neut_1302
symbol: efp
gene_biotype: protein_coding
description:
  Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: Neut_1304
symbol: Neut_1304
gene_biotype: protein_coding
description:
  PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: neu:NE0899 D-isomer specific 2-hydroxyacid dehydrogenase.


ensembl_gene_id: Neut_1310
symbol: Neut_1310
gene_biotype: protein_coding
description:
  Transcriptional regulator, MerR family protein; TIGRFAM: mercuric resistence transcriptional repressor protein MerD; PFAM: regulatory protein, MerR; KEGG: sty:HCM1.159 putative mercuric resistance operon coregulator.


ensembl_gene_id: Neut_1313
symbol: Neut_1313
gene_biotype: protein_coding
description:
  PFAM: Resolvase, N-terminal domain; Resolvase helix-turn-helix domain protein; KEGG: sty:HCM1.168 resolvase.


ensembl_gene_id: Neut_1316
symbol: prfB
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 2 (bRF-2); Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: Neut_1328
symbol: potA
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.


ensembl_gene_id: Neut_1329
symbol: Neut_1329
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: neu:NE1871 putative spermidine/putrescine transport system permease protein.


ensembl_gene_id: Neut_1330
symbol: Neut_1330
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: neu:NE1872 putative spermidine/putrescine transport system permease protein.


ensembl_gene_id: Neut_1331
symbol: Neut_1331
gene_biotype: protein_coding
description:
  Extracellular solute-binding protein, family 1; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.


ensembl_gene_id: Neut_1333
symbol: Neut_1333
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: stc:str1376 type II restriction-modification system modification subunit.


ensembl_gene_id: Neut_1334
symbol: Neut_1334
gene_biotype: protein_coding
description:
  PFAM: Eco57I restriction endonuclease; KEGG: cte:CT1160 type III restriction system endonuclease, putative.


ensembl_gene_id: Neut_1336
symbol: Neut_1336
gene_biotype: protein_coding
description:
  KEGG: neu:NE0833 HrpA-like helicases; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: AAA ATPase; DEAD/DEAH box helicase domain protein.


ensembl_gene_id: Neut_1338
symbol: Neut_1338
gene_biotype: protein_coding
description:
  3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).


ensembl_gene_id: Neut_1339
symbol: Neut_1339
gene_biotype: protein_coding
description:
  PFAM: DNA mismatch repair protein MutS domain protein; KEGG: neu:NE0830 DNA mismatch repair protein MutS family, C-terminal domain.


ensembl_gene_id: Neut_1341
symbol: Neut_1341
gene_biotype: protein_coding
description:
  TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: neu:NE0828 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Neut_1342
symbol: Neut_1342
gene_biotype: protein_coding
description:
  ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: neu:NE0827 ATPase component ABC-type (unclassified) transport system.


ensembl_gene_id: Neut_1343
symbol: Neut_1343
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF214; KEGG: neu:NE0826 putative ABC transport system permease protein.


ensembl_gene_id: Neut_1344
symbol: Neut_1344
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF214; KEGG: neu:NE0825 putative ABC transport system permease protein.


ensembl_gene_id: Neut_1346
symbol: Neut_1346
gene_biotype: protein_coding
description:
  Transcriptional regulator Ada / DNA-O6-methylguanine--protein-cysteine S-methyltransferase; TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein, AraC type; methylated-DNA-[protein]-cysteine S-methyltransferase; KEGG: lic:LIC13402 methylated-DNA--protein-cysteine methyltransferase transcription regulator.


ensembl_gene_id: Neut_1349
symbol: Neut_1349
gene_biotype: protein_coding
description:
  DNA-N1-methyladenine dioxygenase; PFAM: 2OG-Fe(II) oxygenase; KEGG: cps:CPS_4217 oxidoreductase, 2OG-Fe(II) oxygenase family.


ensembl_gene_id: Neut_1354
symbol: Neut_1354
gene_biotype: protein_coding
description:
  PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; KEGG: eba:ebA5076 putative gluthione S-transferase.


ensembl_gene_id: Neut_1355
symbol: recC
gene_biotype: protein_coding
description:
  DNA helicase/exodeoxyribonuclease V, gamma subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recomb [...]


ensembl_gene_id: Neut_1356
symbol: recB
gene_biotype: protein_coding
description:
  DNA helicase/exodeoxyribonuclease V, beta subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombi [...]


ensembl_gene_id: Neut_1357
symbol: recD
gene_biotype: protein_coding
description:
  DNA helicase/exodeoxyribonuclease V, alpha subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recomb [...]


ensembl_gene_id: Neut_1359
symbol: vapC
gene_biotype: protein_coding
description:
  PIN domain family protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.


ensembl_gene_id: Neut_1361
symbol: Neut_1361
gene_biotype: protein_coding
description:
  Periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: neu:NE1408 sensory transduction histidine kinases.


ensembl_gene_id: Neut_1362
symbol: Neut_1362
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: neu:NE1409 possible response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain.


ensembl_gene_id: Neut_1366
symbol: Neut_1366
gene_biotype: protein_coding
description:
  TIGRFAM: integron integrase; PFAM: phage integrase family protein; KEGG: dar:Daro_3427 integron integrase; Belongs to the 'phage' integrase family.


ensembl_gene_id: Neut_1373
symbol: Neut_1373
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rso:RS00906 probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: Neut_1379
symbol: Neut_1379
gene_biotype: protein_coding
description:
  Peptidase M28; PFAM: PDZ/DHR/GLGF domain protein; peptidase M28; KEGG: neu:NE0901 PDZ domain (also known as DHR or GLGF).


ensembl_gene_id: Neut_1380
symbol: Neut_1380
gene_biotype: protein_coding
description:
  PFAM: WD40 domain protein beta Propeller; KEGG: neu:NE0902 periplasmic component of the Tol biopolymer transport system.


ensembl_gene_id: Neut_1385
symbol: Neut_1385
gene_biotype: protein_coding
description:
  PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: neu:NE0907 alcohol dehydrogenase class III and related dehydrogenases; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.


ensembl_gene_id: Neut_1387
symbol: Neut_1387
gene_biotype: protein_coding
description:
  PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: neu:NE0909 Orn/DAP/Arg decarboxylase family 2; Belongs to the Orn/Lys/Arg decarboxylase class-II family.


ensembl_gene_id: Neut_1389
symbol: rimO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: Neut_1395
symbol: Neut_1395
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, RpoE; PFAM: sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: neu:NE0917 RNA polymerase sigma-70 factor; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: Neut_1397
symbol: Neut_1397
gene_biotype: protein_coding
description:
  ABC transporter-related protein; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: neu:NE0919 ABC transporter, fused permease and ATPase domains.


ensembl_gene_id: Neut_1401
symbol: Neut_1401
gene_biotype: protein_coding
description:
  TIGRFAM: cyanophycin synthetase; PFAM: phosphoribosylglycinamide synthetase; Mur ligase, middle domain protein; RimK domain protein ATP-grasp; KEGG: neu:NE0922 putative cyanophycin synthetase.


ensembl_gene_id: Neut_1402
symbol: Neut_1402
gene_biotype: protein_coding
description:
  TIGRFAM: cyanophycin synthetase; PFAM: phosphoribosylglycinamide synthetase; cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; RimK domain protein ATP-grasp; KEGG: neu:NE0923 cyanophycin synthetase.


ensembl_gene_id: Neut_1403
symbol: Neut_1403
gene_biotype: protein_coding
description:
  PFAM: multicopper oxidase, type 2; multicopper oxidase, type 3; KEGG: neu:NE0924 multicopper oxidase type 1.


ensembl_gene_id: Neut_1406
symbol: Neut_1406
gene_biotype: protein_coding
description:
  PFAM: multicopper oxidase, type 1; multicopper oxidase, type 2; multicopper oxidase, type 3; KEGG: neu:NE0927 multicopper oxidase type 1.


ensembl_gene_id: Neut_1407
symbol: Neut_1407
gene_biotype: protein_coding
description:
  TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: neu:NE0928 hypothetical protein.


ensembl_gene_id: Neut_1412
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: Neut_1416
symbol: Neut_1416
gene_biotype: protein_coding
description:
  Two component, sigma54 specific, transcriptional regulator, Fis family protein; PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: neu:NE1124 response regulatory protein.


ensembl_gene_id: Neut_1418
symbol: Neut_1418
gene_biotype: protein_coding
description:
  PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: neu:NE1126 Orn/DAP/Arg decarboxylases family 2; Belongs to the Orn/Lys/Arg decarboxylase class-II family.


ensembl_gene_id: Neut_1425
symbol: Neut_1425
gene_biotype: protein_coding
description:
  KEGG: nmu:Nmul_A1957 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; SMART: PAS domain containing protein.


ensembl_gene_id: Neut_1427
symbol: Neut_1427
gene_biotype: protein_coding
description:
  KEGG: neu:NE1137 putative DNA polymerase III (delta subunit) protein; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta.


ensembl_gene_id: Neut_1428
symbol: lptE
gene_biotype: protein_coding
description:
  Rare lipoprotein B; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane; Belongs to the LptE lipoprotein family.


ensembl_gene_id: Neut_1429
symbol: leuS
gene_biotype: protein_coding
description:
  TIGRFAM: leucyl-tRNA synthetase; KEGG: neu:NE1139 t-RNA synthetase, class Ia:leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: Neut_1430
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine--tRNA-ribosyltransferase- isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: Neut_1431
symbol: tgt
gene_biotype: protein_coding
description:
  tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the  [...]


ensembl_gene_id: Neut_1432
symbol: yajC
gene_biotype: protein_coding
description:
  Protein translocase subunit yajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.


ensembl_gene_id: Neut_1433
symbol: secD
gene_biotype: protein_coding
description:
  Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: Neut_1434
symbol: secF
gene_biotype: protein_coding
description:
  Protein translocase subunit secF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: Neut_1436
symbol: ubiE
gene_biotype: protein_coding
description:
  Demethylmenaquinone methyltransferase / 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).


ensembl_gene_id: Neut_1437
symbol: Neut_1437
gene_biotype: protein_coding
description:
  Agmatinase; TIGRFAM: putative agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: neu:NE1147 agmatinase; Belongs to the arginase family.


ensembl_gene_id: Neut_1438
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II, Aspartic peptidase, MEROPS family A08; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: Neut_1439
symbol: ileS
gene_biotype: protein_coding
description:
  Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: Neut_1440
symbol: Neut_1440
gene_biotype: protein_coding
description:
  KEGG: neu:NE1150 cytidylyltransferase:riboflavin kinase / FAD synthetase; TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; cytidylyltransferase; Belongs to the ribF family.


ensembl_gene_id: Neut_1442
symbol: Neut_1442
gene_biotype: protein_coding
description:
  PFAM: extracellular solute-binding protein, family 5; KEGG: neu:NE1152 bacterial extracellular solute-binding protein, family 5.


ensembl_gene_id: Neut_1443
symbol: Neut_1443
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: neu:NE1153 oligopeptide ABC transporter.


ensembl_gene_id: Neut_1444
symbol: Neut_1444
gene_biotype: protein_coding
description:
  TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase, HAMP region domain protein; KEGG: neu:NE1154 domain of unknown function, DUF9:HAMP domain.


ensembl_gene_id: Neut_1445
symbol: Neut_1445
gene_biotype: protein_coding
description:
  PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: neu:NE1155 DnaJ N-terminal domain:DnaJ C terminal domain.


ensembl_gene_id: Neut_1465
symbol: Neut_1465
gene_biotype: protein_coding
description:
  TIGRFAM: phage protein, HK97 gp10 family; PFAM: TP901-1 ORF40 family protein; KEGG: ppu:PP1571 hypothetical protein.


ensembl_gene_id: Neut_1466
symbol: Neut_1466
gene_biotype: protein_coding
description:
  PFAM: phage head-tail adaptor, putative; KEGG: eba:ebA5483 phage related protein (head-tail adaptor).


ensembl_gene_id: Neut_1469
symbol: Neut_1469
gene_biotype: protein_coding
description:
  TIGRFAM: phage major capsid protein, HK97 family; PFAM: phage major capsid protein, HK97; KEGG: dvu:DVU1500 major capsid protein, HK97 family.


ensembl_gene_id: Neut_1470
symbol: Neut_1470
gene_biotype: protein_coding
description:
  PFAM: peptidase S14, ClpP; KEGG: dvu:DVU1501 ClpP protease family protein; Belongs to the peptidase S14 family.


ensembl_gene_id: Neut_1471
symbol: Neut_1471
gene_biotype: protein_coding
description:
  TIGRFAM: phage portal protein, HK97 family; PFAM: phage portal protein; KEGG: ppr:PBPRB1288 hypothetical phage portal protein.


ensembl_gene_id: Neut_1473
symbol: Neut_1473
gene_biotype: protein_coding
description:
  TIGRFAM: phage terminase, small subunit, putative, P27 family; KEGG: ppu:PP3882 phage terminase, small subunit, putative.


ensembl_gene_id: Neut_1481
symbol: Neut_1481
gene_biotype: protein_coding
description:
  Transcriptional regulator, XRE family protein; SMART: helix-turn-helix domain protein; KEGG: neu:NE1372 helix-turn-helix motif.


ensembl_gene_id: Neut_1484
symbol: Neut_1484
gene_biotype: protein_coding
description:
  Putative phage repressor; PFAM: peptidase S24, S26A and S26B; KEGG: ppu:PP1549 transcriptional regulator, Cro/CI family.


ensembl_gene_id: Neut_1498
symbol: Neut_1498
gene_biotype: protein_coding
description:
  PFAM: phage integrase family protein; KEGG: psb:Psyr_2846 phage integrase:phage integrase, N-terminal SAM-like; Belongs to the 'phage' integrase family.


ensembl_gene_id: Neut_1499
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: Neut_1500
symbol: Neut_1500
gene_biotype: protein_coding
description:
  Farnesyl-diphosphate synthase; PFAM: Polyprenyl synthetase; KEGG: neu:NE1160 polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: Neut_1501
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: Neut_1506
symbol: Neut_1506
gene_biotype: protein_coding
description:
  PFAM: purine and other phosphorylases, family 1; KEGG: neu:NE1167 purine and other phosphorylase, family 1.


ensembl_gene_id: Neut_1507
symbol: Neut_1507
gene_biotype: protein_coding
description:
  Squalene-hopene cyclase; KEGG: neu:NE1168 prenyltransferase and squalene oxidase repeats; TIGRFAM: squalene/oxidosqualene cyclases; squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase.


ensembl_gene_id: Neut_1508
symbol: Neut_1508
gene_biotype: protein_coding
description:
  PFAM: VacJ family lipoprotein; KEGG: neu:NE1169 possible lipoprotein precursor (VacJ) transmembrane.


ensembl_gene_id: Neut_1510
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: Neut_1512
symbol: Neut_1512
gene_biotype: protein_coding
description:
  PFAM: putative RNA methylase; KEGG: neu:NE1174 uncharacterized protein family UPF0020; Belongs to the methyltransferase superfamily.


ensembl_gene_id: Neut_1513
symbol: dsbB
gene_biotype: protein_coding
description:
  Disulfide bond formation protein DsbB; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family.


ensembl_gene_id: Neut_1515
symbol: Neut_1515
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF488; KEGG: neu:NE1403 putative uroporphyrin-III C-methyltransferase.


ensembl_gene_id: Neut_1516
symbol: Neut_1516
gene_biotype: protein_coding
description:
  ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: neu:NE1404 ABC transporter, ATP-binding protein.


ensembl_gene_id: Neut_1519
symbol: Neut_1519
gene_biotype: protein_coding
description:
  PFAM: SirA family protein; KEGG: neu:NE1407 hypothetical protein; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: Neut_1520
symbol: Neut_1520
gene_biotype: protein_coding
description:
  PFAM: Ammonia monooxygenase/methane monooxygenase, subunit C; KEGG: neu:NE1411 ammonia monooxygenase 3 subunit C.


ensembl_gene_id: Neut_1525
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: Neut_1526
symbol: Neut_1526
gene_biotype: protein_coding
description:
  Putative signal-transduction protein with CBS domains; PFAM: CBS domain containing protein; KEGG: neu:NE2398 CBS domain.


ensembl_gene_id: Neut_1527
symbol: Neut_1527
gene_biotype: protein_coding
description:
  Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: Neut_1528
symbol: Neut_1528
gene_biotype: protein_coding
description:
  Cell division ATP-binding protein FtsE; KEGG: neu:NE1414 uncharacterized ABC-type transport system ATPase component/cell division protein; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase.


ensembl_gene_id: Neut_1529
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.


ensembl_gene_id: Neut_1531
symbol: alr
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: Neut_1532
symbol: Neut_1532
gene_biotype: protein_coding
description:
  PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: neu:NE1418 PpiC-type peptidyl-prolyl cis-trans isomerase.


ensembl_gene_id: Neut_1534
symbol: Neut_1534
gene_biotype: protein_coding
description:
  PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: neu:NE1420 probable rubredoxin reductase.


ensembl_gene_id: Neut_1535
symbol: htpX
gene_biotype: protein_coding
description:
  Heat shock protein, Metallo peptidase, MEROPS family M48B; PFAM: peptidase M48, Ste24p; peptidase M56, BlaR1; HtpX domain protein; KEGG: neu:NE1421 peptidase family M48; Belongs to the peptidase M48B family.


ensembl_gene_id: Neut_1536
symbol: Neut_1536
gene_biotype: protein_coding
description:
  PFAM: VacJ family lipoprotein; KEGG: neu:NE1422 putative lipoprotein precursor (vacJ) transmembrane.


ensembl_gene_id: Neut_1537
symbol: hemL
gene_biotype: protein_coding
description:
  TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; KEGG: neu:NE1423 glutamate-1-semialdehyde 2,1-aminomutase protein.


ensembl_gene_id: Neut_1538
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: Neut_1539
symbol: Neut_1539
gene_biotype: protein_coding
description:
  PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: neu:NE1425 putative phosphomethylpyrimidine kinase.


ensembl_gene_id: Neut_1540
symbol: Neut_1540
gene_biotype: protein_coding
description:
  PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: neu:NE1426 rubredoxin:rubredoxin-type Fe(Cys)4 protein.


ensembl_gene_id: Neut_1541
symbol: Neut_1541
gene_biotype: protein_coding
description:
  Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.


ensembl_gene_id: Neut_1543
symbol: anmK
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0075; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.


ensembl_gene_id: Neut_1545
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.


ensembl_gene_id: Neut_1546
symbol: Neut_1546
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KEGG: neu:NE1567 short-chain dehydrogenase/reductase (SDR) superfamily.


ensembl_gene_id: Neut_1547
symbol: Neut_1547
gene_biotype: protein_coding
description:
  PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: neu:NE1568 possible oxidoreductase.


ensembl_gene_id: Neut_1548
symbol: Neut_1548
gene_biotype: protein_coding
description:
  PFAM: acylneuraminate cytidylyltransferase; KEGG: neu:NE1569 cytidylyltransferase (CMP-NeuAc synthetase).


ensembl_gene_id: Neut_1549
symbol: Neut_1549
gene_biotype: protein_coding
description:
  N-acetylneuraminate synthase; PFAM: CBS domain containing protein; Xylose isomerase domain protein TIM barrel; N-acetylneuraminic acid synthase, N-terminal domain; KEGG: neu:NE1570 type III antifreeze protein:CBS domain:NeuB family.


ensembl_gene_id: Neut_1551
symbol: nrdR
gene_biotype: protein_coding
description:
  Ribonucleotide reductase regulator NrdR-like protein; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: Neut_1552
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: Neut_1553
symbol: Neut_1553
gene_biotype: protein_coding
description:
  PFAM: TENA/THI-4 domain protein; KEGG: neu:NE1434 putative coenzyme PQQ synthesis protein C, putative.


ensembl_gene_id: Neut_1554
symbol: Neut_1554
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: neu:NE1435 bacterial regulatory protein, LysR family; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: Neut_1555
symbol: metE
gene_biotype: protein_coding
description:
  Methionine synthase (B12-independent); Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.


ensembl_gene_id: Neut_1556
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: Neut_1557
symbol: Neut_1557
gene_biotype: protein_coding
description:
  TIGRFAM: putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: neu:NE1851 YER057c/YjgF/UK114 family.


ensembl_gene_id: Neut_1558
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: Neut_1560
symbol: greB
gene_biotype: protein_coding
description:
  Transcription elongation factor GreB; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length.


ensembl_gene_id: Neut_1562
symbol: Neut_1562
gene_biotype: protein_coding
description:
  TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: neu:NE0346 possible cation transporter transmembrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Neut_1563
symbol: Neut_1563
gene_biotype: protein_coding
description:
  TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: neu:NE0345 acriflavin resistance protein:heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: Neut_1564
symbol: Neut_1564
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: neu:NE0344 possible response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding.


ensembl_gene_id: Neut_1565
symbol: Neut_1565
gene_biotype: protein_coding
description:
  Periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Two-component sensor kinase N-terminal domain protein; KEGG: neu:NE0343 sensory transduction histidine kinases.


ensembl_gene_id: Neut_1567
symbol: xerC
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerC subunit; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: Neut_1568
symbol: Neut_1568
gene_biotype: protein_coding
description:
  PFAM: Prephenate dehydrogenase; NADP oxidoreductase, coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: neu:NE0337 prephenate dehydrogenase.


ensembl_gene_id: Neut_1569
symbol: hisC
gene_biotype: protein_coding
description:
  Aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase, class I and II; KEGG: neu:NE0336 putative aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: Neut_1570
symbol: Neut_1570
gene_biotype: protein_coding
description:
  TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT domain protein; KEGG: neu:NE0335 prephenate dehydratase (PDT):chorismate mutase:ACT domain.


ensembl_gene_id: Neut_1571
symbol: Neut_1571
gene_biotype: protein_coding
description:
  PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: neu:NE0334 D-isomer specific 2-hydroxyacid dehydrogenase.


ensembl_gene_id: Neut_1572
symbol: serC
gene_biotype: protein_coding
description:
  Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.


ensembl_gene_id: Neut_1573
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: Neut_1577
symbol: Neut_1577
gene_biotype: protein_coding
description:
  Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.


ensembl_gene_id: Neut_1578
symbol: Neut_1578
gene_biotype: protein_coding
description:
  KEGG: neu:NE0327 glyceraldehyde 3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: Neut_1579
symbol: pgk
gene_biotype: protein_coding
description:
  PFAM: phosphoglycerate kinase; KEGG: neu:NE0326 phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.


ensembl_gene_id: Neut_1581
symbol: Neut_1581
gene_biotype: protein_coding
description:
  Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.


ensembl_gene_id: Neut_1583
symbol: Neut_1583
gene_biotype: protein_coding
description:
  PFAM: cytochrome C oxidase, mono-heme subunit/FixO; KEGG: pol:Bpro_1266 cytochrome c oxidase, mono-heme subunit/FixO.


ensembl_gene_id: Neut_1585
symbol: Neut_1585
gene_biotype: protein_coding
description:
  Protein SCO1; KEGG: rfr:Rfer_4124 uncharacterized protein SCO1/SenC/PrrC,involved in biogenesis of respiratory and photosynthetic systems.


ensembl_gene_id: Neut_1587
symbol: rlpA
gene_biotype: protein_coding
description:
  Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: Neut_1588
symbol: mrdB
gene_biotype: protein_coding
description:
  Cell elongation-specific peptidoglycan biosynthesis regulator RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: Neut_1589
symbol: mrdA
gene_biotype: protein_coding
description:
  Cell elongation-specific peptidoglycan D,D-transpeptidase; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.


ensembl_gene_id: Neut_1590
symbol: Neut_1590
gene_biotype: protein_coding
description:
  PFAM: Rod shape-determining protein MreD; KEGG: neu:NE2068 possible rod shape-determining MreD transmembrane protein.


ensembl_gene_id: Neut_1592
symbol: Neut_1592
gene_biotype: protein_coding
description:
  TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; KEGG: neu:NE2070 heat shock protein hsp70:cell shape determining protein MreB/Mrl.


ensembl_gene_id: Neut_1593
symbol: gatC
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: Neut_1594
symbol: gatA
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: Neut_1595
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: Neut_1596
symbol: Neut_1596
gene_biotype: protein_coding
description:
  PFAM: heat shock protein Hsp20; KEGG: neu:NE2074 heat shock HSP20 (alpha crystallin) proteins family; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: Neut_1601
symbol: Neut_1601
gene_biotype: protein_coding
description:
  (p)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: Neut_1607
symbol: folD
gene_biotype: protein_coding
description:
  Methenyltetrahydrofolate cyclohydrolase / 5,10-methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: Neut_1608
symbol: Neut_1608
gene_biotype: protein_coding
description:
  2-oxo-acid dehydrogenase E1 subunit, homodimeric type; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: Neut_1609
symbol: Neut_1609
gene_biotype: protein_coding
description:
  PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: neu:NE0360 dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (e2) protein.


ensembl_gene_id: Neut_1610
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: Neut_1611
symbol: rsfS
gene_biotype: protein_coding
description:
  Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: Neut_1612
symbol: rlmH
gene_biotype: protein_coding
description:
  Protein of unknown function DUF163; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: Neut_1613
symbol: Neut_1613
gene_biotype: protein_coding
description:
  Maf protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: Neut_1614
symbol: Neut_1614
gene_biotype: protein_coding
description:
  TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: neu:NE0355 S1 RNA binding domain:ribonuclease E and G.


ensembl_gene_id: Neut_1615
symbol: Neut_1615
gene_biotype: protein_coding
description:
  Outer membrane transport energization protein TonB; TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: neu:NE0354 possible TonB protein; TC 2.C.1.1.1.


ensembl_gene_id: Neut_1616
symbol: Neut_1616
gene_biotype: protein_coding
description:
  Outer membrane transport energization protein ExbB; PFAM: MotA/TolQ/ExbB proton channel; KEGG: neu:NE0353 MotA/TolQ/ExbB proton channel family; TC 2.C.1.1.1.


ensembl_gene_id: Neut_1617
symbol: Neut_1617
gene_biotype: protein_coding
description:
  PFAM: Biopolymer transport protein ExbD/TolR; KEGG: neu:NE0352 biopolymer transport protein ExbD/TolR; TC 2.C.1.1.1.


ensembl_gene_id: Neut_1618
symbol: rlmB
gene_biotype: protein_coding
description:
  23S rRNA Gm-2251 2'-O-methyltransferase; Specifically methylates the ribose of guanosine 2251 in 23S rRNA.


ensembl_gene_id: Neut_1619
symbol: rnr
gene_biotype: protein_coding
description:
  RNAse R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: Neut_1620
symbol: dinB
gene_biotype: protein_coding
description:
  DNA-directed DNA polymerase; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: Neut_1621
symbol: Neut_1621
gene_biotype: protein_coding
description:
  PFAM: sigma-54 factor, interaction domain-containing protein; SMART: AAA ATPase; KEGG: gme:Gmet_0339 sigma54 specific transcriptional regulator with PAS sensor, fis family.


ensembl_gene_id: Neut_1628
symbol: Neut_1628
gene_biotype: protein_coding
description:
  Carbonate dehydratase; PFAM: carbonic anhydrase; KEGG: neu:NE0606 eukaryotic-type carbonic anhydrase.


ensembl_gene_id: Neut_1632
symbol: Neut_1632
gene_biotype: protein_coding
description:
  Pyridine nucleotide-disulfide oxidoreductase dimerization region; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: neu:NE0774 dihydrolipoamide dehydrogenase.


ensembl_gene_id: Neut_1633
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.


ensembl_gene_id: Neut_1634
symbol: Neut_1634
gene_biotype: protein_coding
description:
  PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: neu:NE0772 bacterioferritin comigratory protein.


ensembl_gene_id: Neut_1635
symbol: Neut_1635
gene_biotype: protein_coding
description:
  PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: neu:NE0771 TPR repeat.


ensembl_gene_id: Neut_1637
symbol: Neut_1637
gene_biotype: protein_coding
description:
  TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: Redoxin domain protein; KEGG: neu:NE0769 periplasmic protein thiol:disulfide oxidoreductase DsbE.


ensembl_gene_id: Neut_1638
symbol: Neut_1638
gene_biotype: protein_coding
description:
  TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: neu:NE0768 cytochrome c-type biogenesis protein (CcmF).


ensembl_gene_id: Neut_1640
symbol: Neut_1640
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family.


ensembl_gene_id: Neut_1644
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: Neut_1645
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: Neut_1646
symbol: infB
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: Neut_1648
symbol: rimP
gene_biotype: protein_coding
description:
  Protein of unknown function DUF150; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: Neut_1653
symbol: Neut_1653
gene_biotype: protein_coding
description:
  ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: neu:NE0734 ABC transporter ATP-binding protein.


ensembl_gene_id: Neut_1655
symbol: selU
gene_biotype: protein_coding
description:
  tRNA 2-selenouridine synthase; Involved in the post-transcriptional modification of the uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Catalyzes the conversion of 2-thiouridine (S2U-RNA) to 2- selenouridine (Se2U-RNA). Acts in a two-step process involving geranylation of 2-thiouridine (S2U) to S-geranyl-2-thiouridine (geS2U) and subsequent selenation of the latter derivative to 2-selenouridine (Se2U) in the tRNA chain.


ensembl_gene_id: Neut_1656
symbol: Neut_1656
gene_biotype: protein_coding
description:
  4-cresol dehydrogenase (hydroxylating); PFAM: FAD linked oxidase domain protein; KEGG: eba:ebA3165 probable p-cresol methylhydroxylase subunit.


ensembl_gene_id: Neut_1660
symbol: rsmI
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0011; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: Neut_1661
symbol: Neut_1661
gene_biotype: protein_coding
description:
  ABC transporter-related protein; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: neu:NE0720 ABC transporter, fused permease and ATPase domains.


ensembl_gene_id: Neut_1662
symbol: Neut_1662
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function UPF0102; KEGG: neu:NE0711 hypothetical protein; Belongs to the UPF0102 family.


ensembl_gene_id: Neut_1665
symbol: Neut_1665
gene_biotype: protein_coding
description:
  Glycosyltransferase 36; PFAM: putative carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: dar:Daro_2046 putative carbohydrate binding:glycosyltransferase 36:glycosyltransferase 36 associated.


ensembl_gene_id: Neut_1668
symbol: Neut_1668
gene_biotype: protein_coding
description:
  PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: neu:NE2040 ATP-dependent RNA helicase RhlE; Belongs to the DEAD box helicase family.


ensembl_gene_id: Neut_1679
symbol: Neut_1679
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF6, transmembrane; KEGG: neu:NE1502 integral membrane protein, DUF6.


ensembl_gene_id: Neut_1682
symbol: priA
gene_biotype: protein_coding
description:
  Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: Neut_1685
symbol: Neut_1685
gene_biotype: protein_coding
description:
  PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: neu:NE1508 HtrA-like serine protease signal peptide protein; Belongs to the peptidase S1C family.


ensembl_gene_id: Neut_1687
symbol: Neut_1687
gene_biotype: protein_coding
description:
  PFAM: MltA domain protein; 3D domain protein; KEGG: neu:NE1510 putative membrane-bound lytic murein transglycosylase A transmembrane protein.


ensembl_gene_id: Neut_1688
symbol: Neut_1688
gene_biotype: protein_coding
description:
  Putative thiol:disulfide interchange protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.


ensembl_gene_id: Neut_1689
symbol: Neut_1689
gene_biotype: protein_coding
description:
  TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding; KEGG: neu:NE1512 hypothetical protein.


ensembl_gene_id: Neut_1690
symbol: acsA
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: Neut_1694
symbol: Neut_1694
gene_biotype: protein_coding
description:
  PFAM: fatty acid desaturase; KEGG: rso:RS01923 putative omega-3 fatty acid desaturase transmembrane protein.


ensembl_gene_id: Neut_1697
symbol: Neut_1697
gene_biotype: protein_coding
description:
  Multicomponent K+:H+ antiporter subunit A; KEGG: neu:NE1901 NADH-ubiquinone oxidoreductase subunit 5 (chain L); TIGRFAM: monovalent cation/H+ antiporter, subunit 1; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); Na+/H+ antiporter MnhB subunit-related protein; TC 2.A.63.1.1; TC 2.A.63.1.1.


ensembl_gene_id: Neut_1698
symbol: Neut_1698
gene_biotype: protein_coding
description:
  Multisubunit potassium/proton antiporter, PhaC subunit; PFAM: NADH-ubiquinone oxidoreductase, chain 4L; KEGG: neu:NE1902 multicomponent K+:H+ antiporter subunit C; TC 2.A.63.1.1.


ensembl_gene_id: Neut_1699
symbol: Neut_1699
gene_biotype: protein_coding
description:
  Multisubunit potassium/proton antiporter, PhaD subunit; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: neu:NE1903 multicomponent K+:H+ antiporter subunit D; TC 2.A.63.1.1.


ensembl_gene_id: Neut_1700
symbol: Neut_1700
gene_biotype: protein_coding
description:
  Multisubunit potassium/proton antiporter, PhaE subunit; PFAM: cation antiporter; KEGG: neu:NE1904 multicomponent K+:H+ antiporter subunit E; TC 2.A.63.1.1.


ensembl_gene_id: Neut_1701
symbol: Neut_1701
gene_biotype: protein_coding
description:
  Multisubunit potassium/proton antiporter, PhaF subunit; PFAM: multiple resistance and pH regulation protein F; KEGG: neu:NE1905 multicomponent K+:H+ antiporter subunit F; TC 2.A.63.1.1.


ensembl_gene_id: Neut_1702
symbol: Neut_1702
gene_biotype: protein_coding
description:
  TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: neu:NE1906 Na+/H+ antiporter; TC 2.A.63.1.1.


ensembl_gene_id: Neut_1704
symbol: Neut_1704
gene_biotype: protein_coding
description:
  ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: neu:NE1454 ABC transporter, ATPase subunit.


ensembl_gene_id: Neut_1706
symbol: Neut_1706
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase C; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: Neut_1707
symbol: rne
gene_biotype: protein_coding
description:
  RNAse E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily.


ensembl_gene_id: Neut_1708
symbol: xerD
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: Neut_1710
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the i [...]


ensembl_gene_id: Neut_1712
symbol: Neut_1712
gene_biotype: protein_coding
description:
  TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: mac:MA1591 surface antigen gene.


ensembl_gene_id: Neut_1715
symbol: Neut_1715
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function UPF0005; KEGG: tbd:Tbd_0489 hypothetical protein; Belongs to the BI1 family.


ensembl_gene_id: Neut_1722
symbol: Neut_1722
gene_biotype: protein_coding
description:
  N-isopropylammelide isopropylaminohydrolase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: ctc:CTC01883 cytosine deaminase.


ensembl_gene_id: Neut_1732
symbol: Neut_1732
gene_biotype: protein_coding
description:
  TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: ava:Ava_B0148 TonB-dependent siderophore receptor.


ensembl_gene_id: Neut_1734
symbol: Neut_1734
gene_biotype: protein_coding
description:
  PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: nfa:nfa25640 hypothetical protein.


ensembl_gene_id: Neut_1735
symbol: Neut_1735
gene_biotype: protein_coding
description:
  PFAM: glutamine amidotransferase, class-II; asparagine synthase; KEGG: lpl:lp_0980 asparagine synthase (glutamine-hydrolysing).


ensembl_gene_id: Neut_1741
symbol: Neut_1741
gene_biotype: protein_coding
description:
  TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: ppu:PP3575 outer membrane ferric siderophore receptor.


ensembl_gene_id: Neut_1742
symbol: Neut_1742
gene_biotype: protein_coding
description:
  PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: pol:Bpro_4782 Orn/DAP/Arg decarboxylase 2; Belongs to the Orn/Lys/Arg decarboxylase class-II family.


ensembl_gene_id: Neut_1754
symbol: radA
gene_biotype: protein_coding
description:
  DNA replication and repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: Neut_1760
symbol: Neut_1760
gene_biotype: protein_coding
description:
  L-serine ammonia-lyase; KEGG: neu:NE0380 iron-sulfur-dependent L-serine dehydratase single chain form; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain.


ensembl_gene_id: Neut_1763
symbol: Neut_1763
gene_biotype: protein_coding
description:
  Periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: neu:NE0377 sensory transduction histidine kinase.


ensembl_gene_id: Neut_1764
symbol: Neut_1764
gene_biotype: protein_coding
description:
  ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: neu:NE0376 ABC transporter, fused permease and ATPase domains.


ensembl_gene_id: Neut_1765
symbol: Neut_1765
gene_biotype: protein_coding
description:
  TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: neu:NE0375 acriflavin resistance protein:heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: Neut_1766
symbol: Neut_1766
gene_biotype: protein_coding
description:
  TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: neu:NE0374 putative cation efflux protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Neut_1769
symbol: Neut_1769
gene_biotype: protein_coding
description:
  PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: neu:NE0371 glycerophosphoryl diester phosphodiesterase.


ensembl_gene_id: Neut_1773
symbol: Neut_1773
gene_biotype: protein_coding
description:
  TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: neu:NE2319 dihydrolipoamide dehydrogenase.


ensembl_gene_id: Neut_1774
symbol: nagZ
gene_biotype: protein_coding
description:
  Glycoside hydrolase, family 3 domain protein; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.


ensembl_gene_id: Neut_1775
symbol: acpS
gene_biotype: protein_coding
description:
  Phosphopantetheine-protein transferase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: Neut_1776
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: Neut_1777
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: Neut_1778
symbol: rnc
gene_biotype: protein_coding
description:
  RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: Neut_1780
symbol: Neut_1780
gene_biotype: protein_coding
description:
  KEGG: neu:NE2326 bacterial leader peptidase 1 (S26A) family:Signal peptidase; TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; Belongs to the peptidase S26 family.


ensembl_gene_id: Neut_1781
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: Neut_1783
symbol: Neut_1783
gene_biotype: protein_coding
description:
  TIGRFAM: protease Do; PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: neu:NE2329 serine protease MucD precursor; Belongs to the peptidase S1C family.


ensembl_gene_id: Neut_1785
symbol: Neut_1785
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, RpoE; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: neu:NE2331 sigma factor, ECF subfamily.


ensembl_gene_id: Neut_1787
symbol: ybeY
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: Neut_1789
symbol: miaB
gene_biotype: protein_coding
description:
  tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: Neut_1794
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: Neut_1796
symbol: rplL
gene_biotype: protein_coding
description:
  LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: Neut_1797
symbol: rplJ
gene_biotype: protein_coding
description:
  LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: Neut_1798
symbol: rplA
gene_biotype: protein_coding
description:
  LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: Neut_1799
symbol: rplK
gene_biotype: protein_coding
description:
  LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: Neut_1800
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: Neut_1801
symbol: secE
gene_biotype: protein_coding
description:
  Protein translocase subunit secE/sec61 gamma; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family.


ensembl_gene_id: Neut_1803
symbol: Neut_1803
gene_biotype: protein_coding
description:
  TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; Secretin/TonB, short N-terminal domain; KEGG: neu:NE2312 probable fimbrial type-4 assembly signal peptide protein; Belongs to the bacterial secretin family.


ensembl_gene_id: Neut_1804
symbol: Neut_1804
gene_biotype: protein_coding
description:
  PFAM: Pilus assembly protein, PilQ; KEGG: neu:NE2313 putative type 4 fimbrial biogenesis protein PilP.


ensembl_gene_id: Neut_1805
symbol: Neut_1805
gene_biotype: protein_coding
description:
  PFAM: Pilus assembly protein, PilO; KEGG: neu:NE2314 putative fimbrial type-4 assembly membrane transmembrane protein.


ensembl_gene_id: Neut_1806
symbol: Neut_1806
gene_biotype: protein_coding
description:
  PFAM: Fimbrial assembly family protein; KEGG: neu:NE2315 putative type 4 fimbrial biogenesis protein PilN.


ensembl_gene_id: Neut_1807
symbol: Neut_1807
gene_biotype: protein_coding
description:
  TIGRFAM: type IV pilus assembly protein PilM; KEGG: neu:NE2316 putative type 4 fimbrial biogenesis protein PilM.


ensembl_gene_id: Neut_1808
symbol: Neut_1808
gene_biotype: protein_coding
description:
  Penicillin-binding protein, 1A family protein; KEGG: neu:NE2317 penicillin-binding 1 (peptidoglycan synthetase) transmembrane protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase.


ensembl_gene_id: Neut_1823
symbol: Neut_1823
gene_biotype: protein_coding
description:
  PFAM: Excinuclease ABC, C subunit domain protein; KEGG: nha:Nham_0101 excinuclease ABC, C subunit-like.


ensembl_gene_id: Neut_1824
symbol: Neut_1824
gene_biotype: protein_coding
description:
  Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: Neut_1828
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: Neut_1829
symbol: rpiA
gene_biotype: protein_coding
description:
  Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.


ensembl_gene_id: Neut_1835
symbol: Neut_1835
gene_biotype: protein_coding
description:
  TIGRFAM: Prepilin-type cleavage/methylation-like; KEGG: neu:NE1749 type IV pilus assembly protein PilW.


ensembl_gene_id: Neut_1836
symbol: Neut_1836
gene_biotype: protein_coding
description:
  TIGRFAM: Prepilin-type cleavage/methylation-like; type IV pilus modification protein PilV; KEGG: neu:NE1750 putative pre-pilin leader sequence.


ensembl_gene_id: Neut_1839
symbol: Neut_1839
gene_biotype: protein_coding
description:
  PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: nmu:Nmul_A1336 two component transcriptional regulator, LuxR family.


ensembl_gene_id: Neut_1840
symbol: Neut_1840
gene_biotype: protein_coding
description:
  Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; PAS fold-3 domain protein; KEGG: neu:NE1738 sensory transduction histidine kinase.


ensembl_gene_id: Neut_1842
symbol: Neut_1842
gene_biotype: protein_coding
description:
  PFAM: Fimbrial protein pilin; KEGG: neu:NE1308 fimbrial protein pilin:bacterial general secretion pathway protein H; Belongs to the N-Me-Phe pilin family.


ensembl_gene_id: Neut_1843
symbol: Neut_1843
gene_biotype: protein_coding
description:
  Gamma-glutamyltransferase 1, Threonine peptidase, MEROPS family T03; KEGG: stm:STM3551 gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase.


ensembl_gene_id: Neut_1859
symbol: Neut_1859
gene_biotype: protein_coding
description:
  Delta-1-pyrroline-5-carboxylate dehydrogenase / L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: Neut_1864
symbol: Neut_1864
gene_biotype: protein_coding
description:
  PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: neu:NE1183 serine protease, subtilase family.


ensembl_gene_id: Neut_1866
symbol: Neut_1866
gene_biotype: protein_coding
description:
  PFAM: phospholipid/glycerol acyltransferase; KEGG: neu:NE1184 phospholipid and glycerol acyltransferase (from 'motifs_6.msf').


ensembl_gene_id: Neut_1867
symbol: Neut_1867
gene_biotype: protein_coding
description:
  D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase; TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: neu:NE1185 hypothetical protein.


ensembl_gene_id: Neut_1869
symbol: glyQ
gene_biotype: protein_coding
description:
  PFAM: glycyl-tRNA synthetase, alpha subunit; KEGG: neu:NE1187 glycyl-tRNA synthetase, alpha subunit.


ensembl_gene_id: Neut_1870
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: Neut_1872
symbol: Neut_1872
gene_biotype: protein_coding
description:
  PFAM: multicopper oxidase, type 2; multicopper oxidase, type 3; KEGG: mca:MCA2129 multicopper oxidase family protein.


ensembl_gene_id: Neut_1879
symbol: Neut_1879
gene_biotype: protein_coding
description:
  TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: neu:NE0679 NAD dependent epimerase/dehydratase family; Belongs to the NAD(P)-dependent epimerase/dehydratase family.


ensembl_gene_id: Neut_1880
symbol: Neut_1880
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: Neut_1881
symbol: Neut_1881
gene_biotype: protein_coding
description:
  KEGG: neu:NE0676 probable oxidoreductase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding.


ensembl_gene_id: Neut_1884
symbol: Neut_1884
gene_biotype: protein_coding
description:
  PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: neu:NE0673 glycolate oxidase (iron-sulfur subunit) protein.


ensembl_gene_id: Neut_1886
symbol: Neut_1886
gene_biotype: protein_coding
description:
  Methylthioadenosine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.


ensembl_gene_id: Neut_1887
symbol: Neut_1887
gene_biotype: protein_coding
description:
  KEGG: neu:NE0671 exodeoxyribonuclease I; PFAM: Exonuclease, RNase T and DNA polymerase III; Exonuclease C-terminal domain protein; SMART: Exonuclease.


ensembl_gene_id: Neut_1891
symbol: Neut_1891
gene_biotype: protein_coding
description:
  KEGG: neu:NE0661 5,10-methylenetetrahydrofolate reductase oxidoreductase protein; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: Neut_1892
symbol: ahcY
gene_biotype: protein_coding
description:
  Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: Neut_1893
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: Neut_1894
symbol: Neut_1894
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KEGG: neu:NE0658 short-chain dehydrogenase/reductase (SDR) superfamily; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Neut_1895
symbol: Neut_1895
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function UPF0079; KEGG: neu:NE0657 uncharacterised P-loop hydrolase UPF0079.


ensembl_gene_id: Neut_1896
symbol: Neut_1896
gene_biotype: protein_coding
description:
  N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; KEGG: neu:NE0656 cell wall hydrolase/autolysin.


ensembl_gene_id: Neut_1898
symbol: prmA
gene_biotype: protein_coding
description:
  [LSU ribosomal protein L11P]-lysine N-methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: Neut_1899
symbol: Neut_1899
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyltransferase subunit alpha; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: Neut_1900
symbol: Neut_1900
gene_biotype: protein_coding
description:
  Biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: Neut_1901
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: Neut_1902
symbol: Neut_1902
gene_biotype: protein_coding
description:
  TIGRFAM: glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; KEGG: neu:NE0650 NAD binding site:D-amino acid oxidase.


ensembl_gene_id: Neut_1903
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: Neut_1905
symbol: hisC-2
gene_biotype: protein_coding
description:
  TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase, class I and II; KEGG: neu:NE0647 histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: Neut_1906
symbol: hisB
gene_biotype: protein_coding
description:
  PFAM: imidazoleglycerol-phosphate dehydratase; KEGG: neu:NE0646 imidazoleglycerol-phosphate dehydratase.


ensembl_gene_id: Neut_1907
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit hisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: Neut_1908
symbol: hisA
gene_biotype: protein_coding
description:
  TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis; KEGG: neu:NE0644 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.


ensembl_gene_id: Neut_1909
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit hisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: Neut_1910
symbol: hisI
gene_biotype: protein_coding
description:
  phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.


ensembl_gene_id: Neut_1911
symbol: hisE
gene_biotype: protein_coding
description:
  PFAM: phosphoribosyl-ATP pyrophosphohydrolase; KEGG: neu:NE0641 phosphoribosyl-ATP pyrophosphohydrolase.


ensembl_gene_id: Neut_1913
symbol: tatA
gene_biotype: protein_coding
description:
  Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: Neut_1914
symbol: tatB
gene_biotype: protein_coding
description:
  Sec-independent protein translocase TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.


ensembl_gene_id: Neut_1915
symbol: tatC
gene_biotype: protein_coding
description:
  Sec-independent protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: Neut_1916
symbol: Neut_1916
gene_biotype: protein_coding
description:
  TIGRFAM: TonB-dependent vitamin B12 receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: neu:NE0636 TonB-dependent receptor protein.


ensembl_gene_id: Neut_1918
symbol: Neut_1918
gene_biotype: protein_coding
description:
  cob(I)yrinic acid a,c-diamide adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.


ensembl_gene_id: Neut_1921
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: Neut_1922
symbol: Neut_1922
gene_biotype: protein_coding
description:
  Protein of unknown function DUF59; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: Neut_1925
symbol: Neut_1925
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF980; KEGG: neu:NE0619 hypothetical protein; Belongs to the MtfA family.


ensembl_gene_id: Neut_1926
symbol: Neut_1926
gene_biotype: protein_coding
description:
  TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; KEGG: neu:NE0618 mono valent cation-transporting P-type ATPase.


ensembl_gene_id: Neut_1932
symbol: Neut_1932
gene_biotype: protein_coding
description:
  PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: neu:NE0617 TonB-dependent receptor protein.


ensembl_gene_id: Neut_1934
symbol: Neut_1934
gene_biotype: protein_coding
description:
  TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: tbd:Tbd_1361 RND efflux membrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Neut_1936
symbol: Neut_1936
gene_biotype: protein_coding
description:
  ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tbd:Tbd_1359 ABC transporter ATPase.


ensembl_gene_id: Neut_1938
symbol: fur
gene_biotype: protein_coding
description:
  Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: neu:NE0616 leucine-rich repeat:ferric uptake regulator family; Belongs to the Fur family.


ensembl_gene_id: Neut_1939
symbol: bamE
gene_biotype: protein_coding
description:
  SmpA/OmlA domain protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: Neut_1940
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate.


ensembl_gene_id: Neut_1941
symbol: Neut_1941
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF853, NPT hydrolase putative; SMART: AAA ATPase; KEGG: pol:Bpro_1966 protein of unknown function DUF853, NPT hydrolase putative.


ensembl_gene_id: Neut_1945
symbol: Neut_1945
gene_biotype: protein_coding
description:
  TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: sat:SYN_00851 type I secretion outer membrane protein.


ensembl_gene_id: Neut_1946
symbol: Neut_1946
gene_biotype: protein_coding
description:
  TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dde:Dde_0402 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Neut_1947
symbol: Neut_1947
gene_biotype: protein_coding
description:
  TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: noc:Noc_1130 hydrophobe/amphiphile efflux-1 HAE1.


ensembl_gene_id: Neut_1949
symbol: apaH
gene_biotype: protein_coding
description:
  Bis(5'nucleosyl)-tetraphosphatase, ApaH; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.


ensembl_gene_id: Neut_1950
symbol: Neut_1950
gene_biotype: protein_coding
description:
  PFAM: phospholipid/glycerol acyltransferase; KEGG: neu:NE0612 phospholipid and glycerol acyltransferase (from 'motifs_6.msf').


ensembl_gene_id: Neut_1952
symbol: gcvPB
gene_biotype: protein_coding
description:
  Glycine dehydrogenase (decarboxylating) beta subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily.


ensembl_gene_id: Neut_1953
symbol: gcvPA
gene_biotype: protein_coding
description:
  Glycine dehydrogenase (decarboxylating) alpha subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.


ensembl_gene_id: Neut_1954
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: Neut_1956
symbol: hemF
gene_biotype: protein_coding
description:
  Coproporphyrinogen oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.


ensembl_gene_id: Neut_1957
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: Neut_1959
symbol: Neut_1959
gene_biotype: protein_coding
description:
  PFAM: TraT complement resistance family protein; KEGG: eba:p1B335 TraT complement resistance protein precursor.


ensembl_gene_id: Neut_1962
symbol: Neut_1962
gene_biotype: protein_coding
description:
  TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: tbd:Tbd_0715 TonB-dependent siderophore receptor.


ensembl_gene_id: Neut_1964
symbol: queH
gene_biotype: protein_coding
description:
  Protein of unknown function DUF208; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).


ensembl_gene_id: Neut_1974
symbol: Neut_1974
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KEGG: neu:NE1333 short-chain dehydrogenase/reductase (SDR) superfamily; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Neut_1975
symbol: Neut_1975
gene_biotype: protein_coding
description:
  Cellulose synthase (UDP-forming); PFAM: glycosyl transferase, family 2; KEGG: neu:NE1334 glycosyl transferase, family 2.


ensembl_gene_id: Neut_1983
symbol: Neut_1983
gene_biotype: protein_coding
description:
  PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: neu:NE1339 H-NS histone family.


ensembl_gene_id: Neut_1995
symbol: Neut_1995
gene_biotype: protein_coding
description:
  Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.


ensembl_gene_id: Neut_1998
symbol: Neut_1998
gene_biotype: protein_coding
description:
  Transcriptional regulator, XRE family protein; PFAM: helix-turn-helix domain protein; KEGG: tde:TDE1647 DNA-binding protein.


ensembl_gene_id: Neut_2005
symbol: ilvE
gene_biotype: protein_coding
description:
  Branched chain amino acid aminotransferase apoenzyme; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: Neut_2007
symbol: Neut_2007
gene_biotype: protein_coding
description:
  Phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: neu:NE1895 phosphoglucomutase and phosphomannomutase family.


ensembl_gene_id: Neut_2008
symbol: nadE
gene_biotype: protein_coding
description:
  NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: Neut_2010
symbol: Neut_2010
gene_biotype: protein_coding
description:
  TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: neu:NE1898 conserved hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Neut_2011
symbol: Neut_2011
gene_biotype: protein_coding
description:
  ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: neu:NE1899 ATPase component ABC-type (unclassified) transport system.


ensembl_gene_id: Neut_2013
symbol: atpD2
gene_biotype: protein_coding
description:
  ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: Neut_2014
symbol: Neut_2014
gene_biotype: protein_coding
description:
  PFAM: H+-transporting two-sector ATPase, delta/epsilon subunit; KEGG: sat:SYN_02098 F0F1-type ATP synthase, epsilon subunit.


ensembl_gene_id: Neut_2018
symbol: atpE-2
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: Neut_2019
symbol: atpF-2
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: Neut_2020
symbol: atpA2
gene_biotype: protein_coding
description:
  ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: Neut_2021
symbol: Neut_2021
gene_biotype: protein_coding
description:
  PFAM: H+-transporting two-sector ATPase, gamma subunit; KEGG: plt:Plut_1071 H(+)-transporting ATP synthase, subunit gamma.


ensembl_gene_id: Neut_2022
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: Neut_2024
symbol: rnhB
gene_biotype: protein_coding
description:
  RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.


ensembl_gene_id: Neut_2025
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: Neut_2026
symbol: Neut_2026
gene_biotype: protein_coding
description:
  PFAM: outer membrane chaperone Skp (OmpH); KEGG: neu:NE1709 putative transmembrane protein; Belongs to the skp family.


ensembl_gene_id: Neut_2027
symbol: bamA
gene_biotype: protein_coding
description:
  Surface antigen (D15); Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: Neut_2028
symbol: Neut_2028
gene_biotype: protein_coding
description:
  TIGRFAM: putative membrane-associated zinc metalloprotease; PFAM: PDZ/DHR/GLGF domain protein; peptidase M50; KEGG: neu:NE1711 membrane-associated Zn-dependent proteases 1.


ensembl_gene_id: Neut_2029
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: Neut_2030
symbol: Neut_2030
gene_biotype: protein_coding
description:
  PFAM: phosphatidate cytidylyltransferase; KEGG: neu:NE1713 phosphatidate cytidylyltransferase; Belongs to the CDS family.


ensembl_gene_id: Neut_2031
symbol: Neut_2031
gene_biotype: protein_coding
description:
  Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: Neut_2032
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: Neut_2034
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts (EF-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: Neut_2035
symbol: rpsB
gene_biotype: protein_coding
description:
  PFAM: ribosomal protein S2; KEGG: neu:NE1718 ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.


ensembl_gene_id: Neut_2036
symbol: Neut_2036
gene_biotype: protein_coding
description:
  Transcriptional regulator, Crp/Fnr family protein; PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: neu:NE1719 putative anaerobic transcriptional regulatory protein.


ensembl_gene_id: Neut_2038
symbol: Neut_2038
gene_biotype: protein_coding
description:
  PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: neu:NE1721 putative iron complex outermembrane recepter protein.


ensembl_gene_id: Neut_2039
symbol: Neut_2039
gene_biotype: protein_coding
description:
  PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; KEGG: neu:NE1724 PHP domain N-terminal region:PHP domain C-terminal region.


ensembl_gene_id: Neut_2040
symbol: Neut_2040
gene_biotype: protein_coding
description:
  TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC, N-terminal domain; KEGG: neu:NE1725 SUA5/YciO/YrdC family:SUA5/YciO/YrdC/YwlC protein family; Belongs to the SUA5 family.


ensembl_gene_id: Neut_2042
symbol: Neut_2042
gene_biotype: protein_coding
description:
  KEGG: neu:NE1727 tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase, class Ib.


ensembl_gene_id: Neut_2043
symbol: Neut_2043
gene_biotype: protein_coding
description:
  Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: Neut_2044
symbol: Neut_2044
gene_biotype: protein_coding
description:
  Condensin subunit ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: Neut_2045
symbol: Neut_2045
gene_biotype: protein_coding
description:
  TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: neu:NE1730 isocitrate dehydrogenase [NADP] oxidoreductase protein.


ensembl_gene_id: Neut_2046
symbol: Neut_2046
gene_biotype: protein_coding
description:
  PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: nmu:Nmul_A2246 cold-shock DNA-binding domain protein.


ensembl_gene_id: Neut_2047
symbol: clpS
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: Neut_2048
symbol: Neut_2048
gene_biotype: protein_coding
description:
  KEGG: neu:NE1733 ATP dependent protease, chaperonin; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; Belongs to the ClpA/ClpB family.


ensembl_gene_id: Neut_2049
symbol: Neut_2049
gene_biotype: protein_coding
description:
  TRAP dicarboxylate transporter- DctP subunit; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.


ensembl_gene_id: Neut_2050
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: Neut_2052
symbol: Neut_2052
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: neu:NE1736 putative transport system permease.


ensembl_gene_id: Neut_2053
symbol: Neut_2053
gene_biotype: protein_coding
description:
  ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: neu:NE1737 nitrate/nitrite transport system ATP-binding protein.


ensembl_gene_id: Neut_2054
symbol: Neut_2054
gene_biotype: protein_coding
description:
  Alpha-glucan phosphorylase; KEGG: neu:NE0466 glycosyltransferase family 35; TIGRFAM: alpha-glucan phosphorylases; PFAM: glycosyl transferase, family 35.


ensembl_gene_id: Neut_2055
symbol: Neut_2055
gene_biotype: protein_coding
description:
  Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: Neut_2056
symbol: Neut_2056
gene_biotype: protein_coding
description:
  PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: neu:NE0464 flagellar motor switch protein FliM.


ensembl_gene_id: Neut_2057
symbol: Neut_2057
gene_biotype: protein_coding
description:
  TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: neu:NE0463 possible flagellar motor switch FliN.


ensembl_gene_id: Neut_2059
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: Neut_2060
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: Neut_2061
symbol: Neut_2061
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: Neut_2065
symbol: argG
gene_biotype: protein_coding
description:
  PFAM: argininosuccinate synthase; KEGG: neu:NE1437 argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.


ensembl_gene_id: Neut_2066
symbol: argF
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.


ensembl_gene_id: Neut_2067
symbol: argD
gene_biotype: protein_coding
description:
  TIGRFAM: acetylornithine and succinylornithine aminotransferases; PFAM: aminotransferase class-III; KEGG: neu:NE1439 acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: Neut_2071
symbol: Neut_2071
gene_biotype: protein_coding
description:
  TIGRFAM: cysteine synthases; cysteine synthase B; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: neu:NE1443 pyridoxal-5'-phosphate-dependent enzymes, beta family; Belongs to the cysteine synthase/cystathionine beta- synthase family.


ensembl_gene_id: Neut_2072
symbol: Neut_2072
gene_biotype: protein_coding
description:
  PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Sel1 domain protein repeat-containing protein; Tetratricopeptide domain protein; KEGG: neu:NE1444 TPR repeat.


ensembl_gene_id: Neut_2073
symbol: Neut_2073
gene_biotype: protein_coding
description:
  TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: helix-hairpin-helix motif; KEGG: neu:NE0940 putative DNA transport competence protein, ComEA.


ensembl_gene_id: Neut_2075
symbol: Neut_2075
gene_biotype: protein_coding
description:
  Putative (U92432) ORF4 (Nitrosospira sp, NpAV); KEGG: neu:NE2061 possible (U92432) ORF4 [Nitrosospira sp. NpAV].


ensembl_gene_id: Neut_2076
symbol: Neut_2076
gene_biotype: protein_coding
description:
  PFAM: Ammonia monooxygenase/methane monooxygenase, subunit B; KEGG: neu:NE2062 ammonia monooxygenase, subunit B.


ensembl_gene_id: Neut_2077
symbol: Neut_2077
gene_biotype: protein_coding
description:
  PFAM: Ammonia monooxygenase/methane monooxygenase, subunit A; KEGG: neu:NE2063 ammonia monooxygenase, subunit A.


ensembl_gene_id: Neut_2078
symbol: Neut_2078
gene_biotype: protein_coding
description:
  PFAM: Ammonia monooxygenase/methane monooxygenase, subunit C; KEGG: neu:NE0945 ammonia monooxygenase subunit C2.


ensembl_gene_id: Neut_2079
symbol: Neut_2079
gene_biotype: protein_coding
description:
  KEGG: neu:NE2127 CDP-diacylglycerol--glycerol-3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: Neut_2080
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.


ensembl_gene_id: Neut_2081
symbol: Neut_2081
gene_biotype: protein_coding
description:
  PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: neu:NE2130 prokaryotic transcription elongation factor GreA/GreB.


ensembl_gene_id: Neut_2082
symbol: Neut_2082
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: neu:NE2131 response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding.


ensembl_gene_id: Neut_2084
symbol: Neut_2084
gene_biotype: protein_coding
description:
  KEGG: neu:NE2132 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; Belongs to the aspartokinase family.


ensembl_gene_id: Neut_2085
symbol: Neut_2085
gene_biotype: protein_coding
description:
  PFAM: Peptidoglycan-binding domain 1 protein; KEGG: neu:NE2133 putative peptidoglycan binding domain 1.


ensembl_gene_id: Neut_2086
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: Neut_2087
symbol: Neut_2087
gene_biotype: protein_coding
description:
  PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: neu:NE2135 putative phosphoketolase.


ensembl_gene_id: Neut_2089
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.


ensembl_gene_id: Neut_2090
symbol: Neut_2090
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, RpoE; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: neu:NE2138 sigma factor, ECF subfamily.


ensembl_gene_id: Neut_2092
symbol: Neut_2092
gene_biotype: protein_coding
description:
  PFAM: TonB-dependent receptor; Secretin/TonB, short N-terminal domain; TonB-dependent receptor, plug; KEGG: neu:NE2140 TonB-dependent receptor protein.


ensembl_gene_id: Neut_2095
symbol: Neut_2095
gene_biotype: protein_coding
description:
  Aminopeptidase P, Metallo peptidase, MEROPS family M24B; PFAM: peptidase M24; peptidase M24B, X-Pro dipeptidase/aminopeptidase domain protein; KEGG: neu:NE2147 metallopeptidase family M24; Belongs to the peptidase M24B family.


ensembl_gene_id: Neut_2096
symbol: Neut_2096
gene_biotype: protein_coding
description:
  PFAM: ribulose-phosphate 3-epimerase; KEGG: neu:NE2148 ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.


ensembl_gene_id: Neut_2097
symbol: gph
gene_biotype: protein_coding
description:
  Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.


ensembl_gene_id: Neut_2098
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase, component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concent [...]


ensembl_gene_id: Neut_2101
symbol: Neut_2101
gene_biotype: protein_coding
description:
  PFAM: transcriptional regulator PadR family protein; Helix-turn-helix, type 11 domain protein; KEGG: neu:NE2153 hypothetical protein.


ensembl_gene_id: Neut_2103
symbol: Neut_2103
gene_biotype: protein_coding
description:
  TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: biotin/lipoyl attachment domain-containing protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: neu:NE2157 dihydrolipoamide dehydrogenase.


ensembl_gene_id: Neut_2104
symbol: proA
gene_biotype: protein_coding
description:
  Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: Neut_2110
symbol: lpxK
gene_biotype: protein_coding
description:
  lipid-A-disaccharide kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA); In the C-terminal section; belongs to the UPF0434 family.


ensembl_gene_id: Neut_2118
symbol: Neut_2118
gene_biotype: protein_coding
description:
  PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: neu:NE2278 low molecular weight phosphotyrosine protein phosphatase.


ensembl_gene_id: Neut_2122
symbol: smc
gene_biotype: protein_coding
description:
  Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: Neut_2123
symbol: queF
gene_biotype: protein_coding
description:
  GTP cyclohydrolase I; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.


ensembl_gene_id: Neut_2124
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: Neut_2128
symbol: Neut_2128
gene_biotype: protein_coding
description:
  PFAM: type II secretion system protein E; GAF domain protein; General secretory system II, protein E domain protein; SMART: AAA ATPase; KEGG: neu:NE2290 bacterial type II secretion system protein E:GAF domain.


ensembl_gene_id: Neut_2129
symbol: Neut_2129
gene_biotype: protein_coding
description:
  cyclic-AMP phosphodiesterase; PFAM: beta-lactamase domain protein; KEGG: neu:NE2291 cAMP phosphodiesterase class-II:metallo-beta-lactamase superfamily.


ensembl_gene_id: Neut_2133
symbol: Neut_2133
gene_biotype: protein_coding
description:
  Prolyl aminopeptidase, Serine peptidase, MEROPS family S33; KEGG: neu:NE2295 prolyl aminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold; Belongs to the peptidase S33 family.


ensembl_gene_id: Neut_2134
symbol: bioD
gene_biotype: protein_coding
description:
  Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: Neut_2135
symbol: bioC
gene_biotype: protein_coding
description:
  Biotin biosynthesis protein BioC; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway.


ensembl_gene_id: Neut_2136
symbol: bioH
gene_biotype: protein_coding
description:
  Carboxylesterase BioH (pimeloyl-CoA synthesis); The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters.


ensembl_gene_id: Neut_2137
symbol: bioF
gene_biotype: protein_coding
description:
  8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.


ensembl_gene_id: Neut_2138
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: Neut_2140
symbol: trmL
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family, group 2; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.


ensembl_gene_id: Neut_2143
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: Neut_2144
symbol: Neut_2144
gene_biotype: protein_coding
description:
  TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: neu:NE0397 6-phosphogluconate dehydrogenase.


ensembl_gene_id: Neut_2148
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: Neut_2151
symbol: rpmH
gene_biotype: protein_coding
description:
  PFAM: ribosomal protein L34; KEGG: neu:NE0390 ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.


ensembl_gene_id: Neut_2152
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: Neut_2153
symbol: Neut_2153
gene_biotype: protein_coding
description:
  Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: Neut_2154
symbol: yidC
gene_biotype: protein_coding
description:
  Protein translocase subunit yidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: Neut_2155
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase trmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: Neut_2156
symbol: rpsO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.


ensembl_gene_id: Neut_2157
symbol: pnp
gene_biotype: protein_coding
description:
  3' exoribonuclease; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: Neut_2158
symbol: Neut_2158
gene_biotype: protein_coding
description:
  TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: neu:NE0170 outer membrane efflux protein.


ensembl_gene_id: Neut_2159
symbol: Neut_2159
gene_biotype: protein_coding
description:
  TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: neu:NE0169 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Neut_2160
symbol: Neut_2160
gene_biotype: protein_coding
description:
  TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: neu:NE0168 multidrug resistance protein MexB.


ensembl_gene_id: Neut_2162
symbol: Neut_2162
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF71, ATP-binding region; KEGG: aba:Acid345_3648 protein of unknown function DUF71, ATPase.


ensembl_gene_id: Neut_2164
symbol: der
gene_biotype: protein_coding
description:
  Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: Neut_2165
symbol: bamB
gene_biotype: protein_coding
description:
  Pyrrolo-quinoline quinone; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: Neut_2167
symbol: hisS
gene_biotype: protein_coding
description:
  KEGG: neu:NE0150 histidine-tRNA synthetase protein; TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase, class II (G, H, P and S); Anticodon-binding domain protein.


ensembl_gene_id: Neut_2168
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: Neut_2170
symbol: Neut_2170
gene_biotype: protein_coding
description:
  KEGG: neu:NE0146 TPR repeat; TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein.


ensembl_gene_id: Neut_2171
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: Neut_2172
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: Neut_2174
symbol: Neut_2174
gene_biotype: protein_coding
description:
  PFAM: aminotransferase class-III; KEGG: neu:NE0142 putative aminotransferase protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: Neut_2175
symbol: dnaQ
gene_biotype: protein_coding
description:
  DNA polymerase III, epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.


ensembl_gene_id: Neut_2178
symbol: gloB
gene_biotype: protein_coding
description:
  Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.


ensembl_gene_id: Neut_2181
symbol: Neut_2181
gene_biotype: protein_coding
description:
  PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD/DEAH box helicase domain protein; KEGG: nha:Nham_2839 SNF2-related.


ensembl_gene_id: Neut_2182
symbol: Neut_2182
gene_biotype: protein_coding
description:
  PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: sme:SMc01227 putative glycerol trinitrate (GTN) reductase protein.


ensembl_gene_id: Neut_2184
symbol: Neut_2184
gene_biotype: protein_coding
description:
  PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: dar:Daro_1444 phosphoglucomutase, alpha-D-glucose phosphate-specific.


ensembl_gene_id: Neut_2185
symbol: Neut_2185
gene_biotype: protein_coding
description:
  PFAM: cation efflux protein; KEGG: lpf:lpl2012 hypothetical protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: Neut_2187
symbol: Neut_2187
gene_biotype: protein_coding
description:
  Agmatinase; TIGRFAM: putative agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: ppu:PP2196 agmatinase; Belongs to the arginase family.


ensembl_gene_id: Neut_2188
symbol: Neut_2188
gene_biotype: protein_coding
description:
  Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.


ensembl_gene_id: Neut_2201
symbol: Neut_2201
gene_biotype: protein_coding
description:
  PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: dar:Daro_2274 metal-dependent phosphohydrolase, HD subdomain.


ensembl_gene_id: Neut_2203
symbol: Neut_2203
gene_biotype: protein_coding
description:
  TIGRFAM: Pseudouridine synthase, Rsu; KEGG: pfl:PFL_5423 ribosomal large subunit pseudouridine synthase E; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: Neut_2211
symbol: Neut_2211
gene_biotype: protein_coding
description:
  PFAM: multiple antibiotic resistance (MarC)-related proteins; KEGG: bas:BUsg257 hypothetical 23.5 kD protein in adhE-oppA.


ensembl_gene_id: Neut_2213
symbol: Neut_2213
gene_biotype: protein_coding
description:
  PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: ornithine cyclodeaminase/Mu-crystallin family protein.


ensembl_gene_id: Neut_2214
symbol: Neut_2214
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: ret:RHE_CH00339 probable cyanate transport protein.


ensembl_gene_id: Neut_2218
symbol: Neut_2218
gene_biotype: protein_coding
description:
  TIGRFAM: CRISPR-associated RAMP protein, Csm3 family; PFAM: protein of unknown function DUF324; KEGG: neu:NE0121 hypothetical protein.


ensembl_gene_id: Neut_2223
symbol: Neut_2223
gene_biotype: protein_coding
description:
  TIGRFAM: CRISPR-associated protein, TM1812 family; CRISPR-associated protein DxTHG motif; KEGG: neu:NE0115 hypothetical protein.


ensembl_gene_id: Neut_2234
symbol: dapE
gene_biotype: protein_coding
description:
  Succinyldiaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.


ensembl_gene_id: Neut_2235
symbol: Neut_2235
gene_biotype: protein_coding
description:
  ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: neu:NE0107 ATPase component uncharacterized ABC-type transport system.


ensembl_gene_id: Neut_2237
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: Neut_2238
symbol: ilvD
gene_biotype: protein_coding
description:
  KEGG: neu:NE0104 dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; Belongs to the IlvD/Edd family.


ensembl_gene_id: Neut_2243
symbol: Neut_2243
gene_biotype: protein_coding
description:
  PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: neu:NE0101 glycerate dehydrogenase.


ensembl_gene_id: Neut_2244
symbol: Neut_2244
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: Neut_2245
symbol: Neut_2245
gene_biotype: protein_coding
description:
  PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: neu:NE0100 general substrate transporters.


ensembl_gene_id: Neut_2247
symbol: Neut_2247
gene_biotype: protein_coding
description:
  Regulatory inactivation of DnaA Hda protein; PFAM: Chromosomal replication initiator, DnaA; KEGG: neu:NE0098 hypothetical protein.


ensembl_gene_id: Neut_2248
symbol: Neut_2248
gene_biotype: protein_coding
description:
  TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; KEGG: neu:NE0097 haloacid dehalogenase/epoxide hydrolase family.


ensembl_gene_id: Neut_2250
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: Neut_2269
symbol: Neut_2269
gene_biotype: protein_coding
description:
  TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: bba:Bd0916 cation transporting ATPase.


ensembl_gene_id: Neut_2272
symbol: tpm
gene_biotype: protein_coding
description:
  PFAM: thiopurine S-methyltransferase; KEGG: bbr:BB1557 thiopurine S-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family.


ensembl_gene_id: Neut_2274
symbol: Neut_2274
gene_biotype: protein_coding
description:
  TIGRFAM: oligopeptide transporters, OPT superfamily; oligopeptide transporter, OPT family; PFAM: Oligopeptide transporter OPT superfamily protein; KEGG: cdi:DIP0329 Opt family protein. putative membrane protein.


ensembl_gene_id: Neut_2277
symbol: purM
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine cyclo-ligase; KEGG: neu:NE0088 phosphoribosylaminoimidazole synthetase; TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein.


ensembl_gene_id: Neut_2278
symbol: purN
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: Neut_2280
symbol: Neut_2280
gene_biotype: protein_coding
description:
  PFAM: Fmu (Sun) domain protein; KEGG: neu:NE0085 SAM (and some other nucleotide) binding motif; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: Neut_2285
symbol: Neut_2285
gene_biotype: protein_coding
description:
  TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; KEGG: neu:NE0080 diguanylate cyclase/phosphodiesterase domain 2 (EAL).


ensembl_gene_id: Neut_2286
symbol: Neut_2286
gene_biotype: protein_coding
description:
  PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: neu:NE0079 FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase).


ensembl_gene_id: Neut_2287
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: Neut_2288
symbol: Neut_2288
gene_biotype: protein_coding
description:
  PFAM: transcriptional coactivator/pterin dehydratase; KEGG: neu:NE0077 pterin 4 alpha carbinolamine dehydratase.


ensembl_gene_id: Neut_2290
symbol: orn
gene_biotype: protein_coding
description:
  Exonuclease, RNase T and DNA polymerase III; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family.


ensembl_gene_id: Neut_2291
symbol: Neut_2291
gene_biotype: protein_coding
description:
  KEGG: neu:NE0074 putative alpha-glucan phosphorylase, putative; TIGRFAM: alpha-glucan phosphorylases; PFAM: glycosyl transferase, family 35.


ensembl_gene_id: Neut_2292
symbol: panC
gene_biotype: protein_coding
description:
  Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: Neut_2293
symbol: panB
gene_biotype: protein_coding
description:
  Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: Neut_2295
symbol: Neut_2295
gene_biotype: protein_coding
description:
  KEGG: neu:NE0070 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK.


ensembl_gene_id: Neut_2296
symbol: pcnB
gene_biotype: protein_coding
description:
  poly(A) polymerase; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: Neut_2297
symbol: clsB
gene_biotype: protein_coding
description:
  Phospholipase D/Transphosphatidylase; Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.


ensembl_gene_id: Neut_2299
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: Neut_2301
symbol: lptA
gene_biotype: protein_coding
description:
  OstA family protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane.


ensembl_gene_id: Neut_2302
symbol: Neut_2302
gene_biotype: protein_coding
description:
  ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: neu:NE0063 ATPase component ABC-type (unclassified) transport system.


ensembl_gene_id: Neut_2303
symbol: Neut_2303
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: Neut_2304
symbol: Neut_2304
gene_biotype: protein_coding
description:
  TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: neu:NE0061 sigma 54 modulation protein / S30EA ribosomal protein.


ensembl_gene_id: Neut_2305
symbol: Neut_2305
gene_biotype: protein_coding
description:
  PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: neu:NE0060 phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).


ensembl_gene_id: Neut_2306
symbol: hprK
gene_biotype: protein_coding
description:
  Hpr(Ser) kinase/phosphatase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr).


ensembl_gene_id: Neut_2307
symbol: ubiX
gene_biotype: protein_coding
description:
  3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: Neut_2308
symbol: Neut_2308
gene_biotype: protein_coding
description:
  PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: neu:NE0057 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.


ensembl_gene_id: Neut_2310
symbol: Neut_2310
gene_biotype: protein_coding
description:
  Intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.


ensembl_gene_id: Neut_2311
symbol: Neut_2311
gene_biotype: protein_coding
description:
  ABC transporter-related protein; PFAM: ABC transporter related; KEGG: neu:NE0054 ABC transporter transmembrane region:ABC transporter.


ensembl_gene_id: Neut_2313
symbol: Neut_2313
gene_biotype: protein_coding
description:
  PFAM: copper resistance D domain protein; KEGG: neu:NE2058 cytochrome c, class IC:cytochrome c, class I.


ensembl_gene_id: Neut_2320
symbol: Neut_2320
gene_biotype: protein_coding
description:
  Translation factor SUA5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: Neut_2322
symbol: Neut_2322
gene_biotype: protein_coding
description:
  Peptidase M23B; PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: neu:NE0948 LysM motif:peptidase family M23/M37.


ensembl_gene_id: Neut_2323
symbol: pcm
gene_biotype: protein_coding
description:
  protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.


ensembl_gene_id: Neut_2324
symbol: surE
gene_biotype: protein_coding
description:
  5'-nucleotidase / 3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: Neut_2325
symbol: ihfA
gene_biotype: protein_coding
description:
  Integration host factor, alpha subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: Neut_2326
symbol: pheT
gene_biotype: protein_coding
description:
  KEGG: neu:NE0953 phenylalanyl-tRNA synthetase beta chain protein; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: Neut_2327
symbol: pheS
gene_biotype: protein_coding
description:
  KEGG: neu:NE0954 phenylalanyl-tRNA synthetase, alpha-subunit; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase, class IIc; aminoacyl tRNA synthetase, class II domain protein; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: Neut_2328
symbol: rplT
gene_biotype: protein_coding
description:
  LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: Neut_2329
symbol: rpmI
gene_biotype: protein_coding
description:
  PFAM: ribosomal protein L35; KEGG: neu:NE0956 ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.


ensembl_gene_id: Neut_2330
symbol: infC
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: Neut_2331
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). Also edits incorrectly charged L-seryl-tRNA(Thr).


ensembl_gene_id: Neut_2336
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: Neut_2337
symbol: Neut_2337
gene_biotype: protein_coding
description:
  TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: neu:NE0964 bacterial type II secretion system protein E.


ensembl_gene_id: Neut_2338
symbol: Neut_2338
gene_biotype: protein_coding
description:
  Pilus retraction ATPase PilT; KEGG: neu:NE0965 twitching mobility protein transport fimbria; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase.


ensembl_gene_id: Neut_2339
symbol: Neut_2339
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0001; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: Neut_2340
symbol: Neut_2340
gene_biotype: protein_coding
description:
  PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: neu:NE0967 3Fe-4S ferredoxin:4Fe-4S ferredoxin, iron-sulfur binding domain.


ensembl_gene_id: Neut_2341
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: Neut_2342
symbol: Neut_2342
gene_biotype: protein_coding
description:
  TIGRFAM: putative methyltransferase; PFAM: conserved hypothetical protein 95; KEGG: neu:NE0969 possible N6-adenine-specific methylase.


ensembl_gene_id: Neut_2349
symbol: Neut_2349
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ath:At5g44310_1 late embryogenesis abundant (LEA) domain-containing protein.


ensembl_gene_id: Neut_2350
symbol: Neut_2350
gene_biotype: protein_coding
description:
  PFAM: CsbD family protein; KEGG: hch:HCH_05492 hypothetical protein; Belongs to the UPF0337 (CsbD) family.


ensembl_gene_id: Neut_2366
symbol: Neut_2366
gene_biotype: protein_coding
description:
  Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.


ensembl_gene_id: Neut_2370
symbol: Neut_2370
gene_biotype: protein_coding
description:
  KEGG: neu:NE2470 ADP-ribose pyrophosphatase; TIGRFAM: Nucleoside diphosphate pyrophosphatase; PFAM: NUDIX hydrolase.


ensembl_gene_id: Neut_2372
symbol: Neut_2372
gene_biotype: protein_coding
description:
  TIGRFAM: conserved hypothetical protein; PFAM: YicC N-terminal domain protein; domain of unknown function DUF1732; KEGG: neu:NE2472 hypothetical protein.


ensembl_gene_id: Neut_2377
symbol: Neut_2377
gene_biotype: protein_coding
description:
  Mg chelatase, subunit ChlI; KEGG: neu:NE0193 probable Mg(2+) chelatase family protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase, ChlI subunit; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase.


ensembl_gene_id: Neut_2378
symbol: Neut_2378
gene_biotype: protein_coding
description:
  Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: Neut_2380
symbol: rpsR
gene_biotype: protein_coding
description:
  SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: Neut_2381
symbol: priB
gene_biotype: protein_coding
description:
  Restart primosome assembly protein PriB; Binds single-stranded DNA at the primosome assembly site (PAS); Belongs to the PriB family.


ensembl_gene_id: Neut_2384
symbol: argB
gene_biotype: protein_coding
description:
  N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: Neut_2388
symbol: Neut_2388
gene_biotype: protein_coding
description:
  D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein; KEGG: neu:NE1009 D-lactate dehydrogenase.


ensembl_gene_id: Neut_2389
symbol: ctaB
gene_biotype: protein_coding
description:
  Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.


ensembl_gene_id: Neut_2393
symbol: Neut_2393
gene_biotype: protein_coding
description:
  PFAM: cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: neu:NE1015 putative cytochrome C oxidase assembly transmembrane protein.


ensembl_gene_id: Neut_2394
symbol: Neut_2394
gene_biotype: protein_coding
description:
  Cytochrome-c oxidase; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.


ensembl_gene_id: Neut_2395
symbol: Neut_2395
gene_biotype: protein_coding
description:
  Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).


ensembl_gene_id: Neut_2398
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: Neut_2399
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine.


ensembl_gene_id: Neut_2400
symbol: Neut_2400
gene_biotype: protein_coding
description:
  TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: nmu:Nmul_A0264 dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: Neut_2401
symbol: Neut_2401
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.


ensembl_gene_id: Neut_2403
symbol: Neut_2403
gene_biotype: protein_coding
description:
  PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: neu:NE1025 bacterial outer membrane protein.


ensembl_gene_id: Neut_2415
symbol: Neut_2415
gene_biotype: protein_coding
description:
  PFAM: filamentation induced by cAMP protein Fic; KEGG: cch:Cag_0831 regulatory proteins, AsnC family.


ensembl_gene_id: Neut_2419
symbol: Neut_2419
gene_biotype: protein_coding
description:
  PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: bbr:BB0911 putative serine protease.


ensembl_gene_id: Neut_2424
symbol: sbcD
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: Neut_2426
symbol: Neut_2426
gene_biotype: protein_coding
description:
  ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: neu:NE0976 putative nitrate transport system ATP-binding protein.


ensembl_gene_id: Neut_2427
symbol: Neut_2427
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: neu:NE0977 putative nitrate transport system permease protein.


ensembl_gene_id: Neut_2432
symbol: Neut_2432
gene_biotype: protein_coding
description:
  TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: ret:RHE_CH03488 probable 6-phosphogluconate dehydrogenase protein.


ensembl_gene_id: Neut_2433
symbol: pgi-2
gene_biotype: protein_coding
description:
  PFAM: ROK family protein; phosphoglucose isomerase (PGI); KEGG: dra:DR1742 glucose-6-phosphate isomerase; Belongs to the GPI family.


ensembl_gene_id: Neut_2434
symbol: Neut_2434
gene_biotype: protein_coding
description:
  Chromosome segregation DNA-binding protein; TIGRFAM: parB-like partition proteins; PFAM: ParB domain protein nuclease; KEGG: neu:NE2473 ParB-like nuclease domain:ParB-like partition protein; Belongs to the ParB family.


ensembl_gene_id: Neut_2435
symbol: Neut_2435
gene_biotype: protein_coding
description:
  Chromosome segregation ATPase; PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: neu:NE2474 ParA family ATPase.


ensembl_gene_id: Neut_2436
symbol: rsmG
gene_biotype: protein_coding
description:
  16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.


ensembl_gene_id: Neut_2437
symbol: mnmG
gene_biotype: protein_coding
description:
  Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: Neut_2439
symbol: Neut_2439
gene_biotype: protein_coding
description:
  PFAM: Anti-sigma-28 factor, FlgM family protein; KEGG: neu:NE2478 negative regulator of flagellin synthesis FlgM.


ensembl_gene_id: Neut_2440
symbol: Neut_2440
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: neu:NE2479 oligopeptide ABC transporter.


ensembl_gene_id: Neut_2441
symbol: Neut_2441
gene_biotype: protein_coding
description:
  Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: neu:NE2480 ATPase component ABC-type dipeptide/oligopeptide/nickel transport system; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.


ensembl_gene_id: Neut_2442
symbol: prfC
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 3 (bRF-3); Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: Neut_2443
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: Neut_2444
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: Neut_2445
symbol: Neut_2445
gene_biotype: protein_coding
description:
  PFAM: GTP-binding signal recognition particle SRP54, G- domain; SMART: AAA ATPase; KEGG: neu:NE2489 possible flagellar biosynthetic protein FlhF.


ensembl_gene_id: Neut_2447
symbol: fliA
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.


ensembl_gene_id: Neut_2456
symbol: Neut_2456
gene_biotype: protein_coding
description:
  PFAM: Aldose 1-epimerase; KEGG: neu:NE1003 aldose 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family.


ensembl_gene_id: Neut_2457
symbol: Neut_2457
gene_biotype: protein_coding
description:
  Aconitase; TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein; KEGG: neu:NE1002 aconitate hydratase protein.


ensembl_gene_id: Neut_2458
symbol: Neut_2458
gene_biotype: protein_coding
description:
  Hydroxypyruvate reductase; PFAM: MOFRL domain protein; KEGG: neu:NE2456 putative hydroxypyruvate reductase oxidoreductase protein.


ensembl_gene_id: Neut_2459
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: Neut_2460
symbol: Neut_2460
gene_biotype: protein_coding
description:
  PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: neu:NE2454 MFS family transporter.


ensembl_gene_id: Neut_2461
symbol: Neut_2461
gene_biotype: protein_coding
description:
  Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: Neut_2462
symbol: Neut_2462
gene_biotype: protein_coding
description:
  ABC transporter-related protein; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: neu:NE2452 ABC transporter, fused permease and ATPase domains.


ensembl_gene_id: Neut_2464
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: Neut_2465
symbol: speH
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase-related protein; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.


ensembl_gene_id: Neut_2466
symbol: Neut_2466
gene_biotype: protein_coding
description:
  PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; KEGG: mag:amb2972 acyl-CoA synthetase/AMP-acid ligase II.


ensembl_gene_id: Neut_2467
symbol: Neut_2467
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase, alpha subunit; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: Neut_2468
symbol: Neut_2468
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.


ensembl_gene_id: Neut_2469
symbol: Neut_2469
gene_biotype: protein_coding
description:
  PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase, catalytic; KEGG: neu:NE2421 SLT domain:LysM motif.


ensembl_gene_id: Neut_2470
symbol: Neut_2470
gene_biotype: protein_coding
description:
  Urea amidolyase related protein; KEGG: neu:NE2420 biotin / lipoyl attachment:carbamoyl-phosphate synthase:DUF183; TIGRFAM: urea amidolyase related protein; PFAM: biotin/lipoyl attachment domain-containing protein; Allophanate hydrolase subunit 2; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein.


ensembl_gene_id: Neut_2472
symbol: Neut_2472
gene_biotype: protein_coding
description:
  Amino acid/polyamine/organocation transporter, APC superfamily; PFAM: amino acid permease-associated region; KEGG: neu:NE2419 amino acid permease; TC 2.A.3.


ensembl_gene_id: Neut_2475
symbol: Neut_2475
gene_biotype: protein_coding
description:
  Urea amidolyase related protein; KEGG: neu:NE2416 biotin / lipoyl attachment:DUF183:DUF213; TIGRFAM: urea amidolyase related protein; PFAM: biotin/lipoyl attachment domain-containing protein; Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1.


ensembl_gene_id: Neut_2477
symbol: Neut_2477
gene_biotype: protein_coding
description:
  TIGRFAM: lytic murein transglycosylase B; KEGG: neu:NE1033 putative membrane-bound lytic transglycosylase.


ensembl_gene_id: Neut_2478
symbol: Neut_2478
gene_biotype: protein_coding
description:
  TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: neu:NE1034 thioredoxin; Belongs to the thioredoxin family.


ensembl_gene_id: Neut_2479
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: Neut_2481
symbol: ftsB
gene_biotype: protein_coding
description:
  Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: Neut_2482
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: Neut_2483
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: Neut_2484
symbol: Neut_2484
gene_biotype: protein_coding
description:
  PFAM: succinate dehydrogenase, cytochrome b subunit; KEGG: neu:NE1046 succinate dehydrogenase, cytochrome b subunit.


ensembl_gene_id: Neut_2486
symbol: Neut_2486
gene_biotype: protein_coding
description:
  KEGG: neu:NE1048 succinate dehydrogenase/fumarate reductase, flavoprotein subunits; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.


ensembl_gene_id: Neut_2488
symbol: Neut_2488
gene_biotype: protein_coding
description:
  DNA translocase FtsK; PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: neu:NE1051 FtsK/SpoIIIE family:AAA ATPase superfamily.


ensembl_gene_id: Neut_2489
symbol: lolA
gene_biotype: protein_coding
description:
  Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: Neut_2490
symbol: Neut_2490
gene_biotype: protein_coding
description:
  Recombination protein MgsA; PFAM: magnesium chelatase, ChlI subunit; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: neu:NE1053 uncharacterized ATPase related to the helicase subunit of the Holliday junction resolvase.


ensembl_gene_id: Neut_2491
symbol: lolD
gene_biotype: protein_coding
description:
  Lipoprotein releasing system, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.


ensembl_gene_id: Neut_2492
symbol: Neut_2492
gene_biotype: protein_coding
description:
  TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: neu:NE1057 DUF214.


ensembl_gene_id: Neut_2505
symbol: Neut_2505
gene_biotype: protein_coding
description:
  PFAM: phage integrase family protein; KEGG: nmu:Nmul_A2184 phage integrase; Belongs to the 'phage' integrase family.


ensembl_gene_id: Neut_2506
symbol: Neut_2506
gene_biotype: protein_coding
description:
  Phosphoglycolate phosphatase; KEGG: neu:NE2546 haloacid dehalogenase/epoxide hydrolase family; TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase.


ensembl_gene_id: Neut_2507
symbol: ubiG
gene_biotype: protein_coding
description:
  3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.


ensembl_gene_id: Neut_2509
symbol: Neut_2509
gene_biotype: protein_coding
description:
  ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: neu:NE2549 ATPase component ABC-type multidrug transport system.


ensembl_gene_id: Neut_2512
symbol: mutM
gene_biotype: protein_coding
description:
  Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: Neut_2514
symbol: Neut_2514
gene_biotype: protein_coding
description:
  TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; KEGG: neu:NE2554 GTP-binding elongation factor:elongation factor Tu domain 2.


ensembl_gene_id: Neut_2515
symbol: Neut_2515
gene_biotype: protein_coding
description:
  TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein; KEGG: neu:NE2555 riboflavin synthase alpha chain family lumazine binding domain.


ensembl_gene_id: Neut_2516
symbol: ribB
gene_biotype: protein_coding
description:
  3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.


ensembl_gene_id: Neut_2517
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: Neut_2518
symbol: nusB
gene_biotype: protein_coding
description:
  NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: Neut_2519
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine-phosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: Neut_2520
symbol: Neut_2520
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphatase; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).


ensembl_gene_id: Neut_2523
symbol: Neut_2523
gene_biotype: protein_coding
description:
  TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: neu:NE2564 ATP-dependent DNA helicase RecQ.


ensembl_gene_id: Neut_2526
symbol: Neut_2526
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF442; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: neu:NE2567 hypothetical protein.


ensembl_gene_id: Neut_2527
symbol: Neut_2527
gene_biotype: protein_coding
description:
  Transcriptional regulator, ArsR family; PFAM: regulatory protein, ArsR; helix-turn-helix, HxlR type; KEGG: neu:NE2568 bacterial regulatory proteins, ArsR family.


ensembl_gene_id: Neut_2528
symbol: Neut_2528
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF395, YeeE/YedE; KEGG: neu:NE2569 probable transmembrane protein.


ensembl_gene_id: Neut_2529
symbol: Neut_2529
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF395, YeeE/YedE; KEGG: neu:NE2570 probable transmembrane protein.


ensembl_gene_id: Neut_2531
symbol: Neut_2531
gene_biotype: protein_coding
description:
  TIGRFAM: Twin-arginine translocation pathway signal; PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: neu:NE2572 hypothetical protein.


