# geneInfo

ensembl_gene_id: Bphy_2423
symbol: Bphy_2423
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A3887 major facilitator superfamily (MFS) transporter.


ensembl_gene_id: Bphy_2428
symbol: Bphy_2428
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_0763 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_2429
symbol: Bphy_2429
gene_biotype: protein_coding
description:
  PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bxe:Bxe_A3894 putative D-lactate dehydrogenase.


ensembl_gene_id: Bphy_2432
symbol: Bphy_2432
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A3897 major facilitator superfamily (MFS) transporter.


ensembl_gene_id: Bphy_2433
symbol: Bphy_2433
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A3898 major facilitator superfamily (MFS) transporter.


ensembl_gene_id: Bphy_2434
symbol: Bphy_2434
gene_biotype: protein_coding
description:
  Fumarylacetoacetase; KEGG: bxe:Bxe_A3899 fumarylacetoacetase (HmgB); TIGRFAM: fumarylacetoacetase; PFAM: fumarylacetoacetate (FAA) hydrolase; Domain of unknown function DUF1969.


ensembl_gene_id: Bphy_2435
symbol: hmgA
gene_biotype: protein_coding
description:
  Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate.


ensembl_gene_id: Bphy_2437
symbol: Bphy_2437
gene_biotype: protein_coding
description:
  PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bxe:Bxe_A3903 transcriptional regulator, IclR family.


ensembl_gene_id: Bphy_2438
symbol: Bphy_2438
gene_biotype: protein_coding
description:
  PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bur:Bcep18194_A3906 acyl-CoA dehydrogenase-like.


ensembl_gene_id: Bphy_2439
symbol: Bphy_2439
gene_biotype: protein_coding
description:
  Peroxidase; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bxe:Bxe_A3905 peroxidase.


ensembl_gene_id: Bphy_2448
symbol: nrdR
gene_biotype: protein_coding
description:
  ATP-cone domain protein; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: Bphy_2449
symbol: glyA
gene_biotype: protein_coding
description:
  Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: Bphy_2450
symbol: Bphy_2450
gene_biotype: protein_coding
description:
  PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bcn:Bcen_0322 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Bphy_2451
symbol: Bphy_2451
gene_biotype: protein_coding
description:
  TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: bxe:Bxe_A3916 4-hydroxybenzoyl-CoA thioesterase.


ensembl_gene_id: Bphy_2452
symbol: tolQ
gene_biotype: protein_coding
description:
  Protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: Bphy_2453
symbol: Bphy_2453
gene_biotype: protein_coding
description:
  TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bxe:Bxe_A3918 biopolymer transport protein ExbD/TolR.


ensembl_gene_id: Bphy_2454
symbol: Bphy_2454
gene_biotype: protein_coding
description:
  Protein TolA; TIGRFAM: TonB family protein; protein TolA; PFAM: Tol-Pal system TolA; KEGG: bxe:Bxe_A3919 TonB protein.


ensembl_gene_id: Bphy_2455
symbol: tolB
gene_biotype: protein_coding
description:
  Tol-Pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: Bphy_2456
symbol: pal
gene_biotype: protein_coding
description:
  Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: Bphy_2457
symbol: cpoB
gene_biotype: protein_coding
description:
  Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.


ensembl_gene_id: Bphy_2459
symbol: Bphy_2459
gene_biotype: protein_coding
description:
  PFAM: polysaccharide biosynthesis protein; KEGG: bxe:Bxe_A3847 polysaccharide exporter, PST family, MOP superfamily.


ensembl_gene_id: Bphy_2465
symbol: Bphy_2465
gene_biotype: protein_coding
description:
  PFAM: FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: bxe:Bxe_A3857 putative oxidoreductase.


ensembl_gene_id: Bphy_2466
symbol: Bphy_2466
gene_biotype: protein_coding
description:
  Acetyltransferase (isoleucine patch superfamily)-like protein; KEGG: bxe:Bxe_A3858 hypothetical protein.


ensembl_gene_id: Bphy_2470
symbol: fcl
gene_biotype: protein_coding
description:
  NAD-dependent epimerase/dehydratase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.


ensembl_gene_id: Bphy_2472
symbol: Bphy_2472
gene_biotype: protein_coding
description:
  Exopolysaccharide transport protein family; KEGG: bxe:Bxe_A3864 exopolysaccharide export associated tyrosine kinase; TIGRFAM: exopolysaccharide transport protein family; capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein.


ensembl_gene_id: Bphy_2474
symbol: Bphy_2474
gene_biotype: protein_coding
description:
  TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: bxe:Bxe_A3866 undecaprenyl-phosphate galactosephosphotransferase.


ensembl_gene_id: Bphy_2475
symbol: Bphy_2475
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_A3867 mannose-1-phosphateguanylyl transferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein.


ensembl_gene_id: Bphy_2476
symbol: Bphy_2476
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_A3868 transcriptional regulator, AraC family.


ensembl_gene_id: Bphy_2479
symbol: Bphy_2479
gene_biotype: protein_coding
description:
  TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: bte:BTH_I2634 UTP-glucose-1-phosphate uridylyltransferase.


ensembl_gene_id: Bphy_2481
symbol: Bphy_2481
gene_biotype: protein_coding
description:
  PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: spe:Spro_1443 major facilitator superfamily MFS_1.


ensembl_gene_id: Bphy_2483
symbol: Bphy_2483
gene_biotype: protein_coding
description:
  PFAM: MscS Mechanosensitive ion channel; KEGG: bxe:Bxe_A3932 small conductance mechanosensitive ion channel, (MscS) family.


ensembl_gene_id: Bphy_2484
symbol: Bphy_2484
gene_biotype: protein_coding
description:
  PFAM: SNARE associated Golgi protein; KEGG: bxe:Bxe_A3933 putative DedA family transmembrane protein.


ensembl_gene_id: Bphy_2485
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: Bphy_2486
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: Bphy_2487
symbol: purM
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_A3936 phosphoribosylformylglycinamidine cyclo-ligase; TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein.


ensembl_gene_id: Bphy_2489
symbol: Bphy_2489
gene_biotype: protein_coding
description:
  TIGRFAM: DnaA regulatory inactivator Hda; PFAM: Chromosomal replication initiator DnaA; KEGG: bxe:Bxe_A3953 hypothetical protein.


ensembl_gene_id: Bphy_2490
symbol: Bphy_2490
gene_biotype: protein_coding
description:
  TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; KEGG: bam:Bamb_0653 HAD-superfamily subfamily IB hydrolase, TIGR01490.


ensembl_gene_id: Bphy_2491
symbol: pcnB
gene_biotype: protein_coding
description:
  poly(A) polymerase; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: Bphy_2492
symbol: Bphy_2492
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_A3956 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HppK; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK.


ensembl_gene_id: Bphy_2494
symbol: panB
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: Bphy_2495
symbol: Bphy_2495
gene_biotype: protein_coding
description:
  TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding-like; KEGG: bxe:Bxe_A3959 para-aminobenzoate synthase, component I.


ensembl_gene_id: Bphy_2496
symbol: dnaJ
gene_biotype: protein_coding
description:
  Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]


ensembl_gene_id: Bphy_2499
symbol: grpE
gene_biotype: protein_coding
description:
  GrpE protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...]


ensembl_gene_id: Bphy_2502
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: Bphy_2503
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: Bphy_2504
symbol: nadK
gene_biotype: protein_coding
description:
  ATP-NAD/AcoX kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: Bphy_2506
symbol: glnE
gene_biotype: protein_coding
description:
  (Glutamate--ammonia-ligase) adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal tra [...]


ensembl_gene_id: Bphy_2508
symbol: Bphy_2508
gene_biotype: protein_coding
description:
  PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bxe:Bxe_A3971 putative carbon-nitrogen hydrolase protein.


ensembl_gene_id: Bphy_2509
symbol: Bphy_2509
gene_biotype: protein_coding
description:
  PFAM: peptidase U62 modulator of DNA gyrase; KEGG: bcn:Bcen_0255 peptidase U62, modulator of DNA gyrase.


ensembl_gene_id: Bphy_2510
symbol: Bphy_2510
gene_biotype: protein_coding
description:
  Phospho-2-dehydro-3-deoxyheptonate aldolase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).


ensembl_gene_id: Bphy_2512
symbol: Bphy_2512
gene_biotype: protein_coding
description:
  TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: bxe:Bxe_A3976 protein of unknown function DUF80; Belongs to the Cob(I)alamin adenosyltransferase family.


ensembl_gene_id: Bphy_2514
symbol: Bphy_2514
gene_biotype: protein_coding
description:
  D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein; KEGG: bxe:Bxe_A3978 D-lactate dehydrogenase (cytochrome).


ensembl_gene_id: Bphy_2515
symbol: Bphy_2515
gene_biotype: protein_coding
description:
  PFAM: FAD linked oxidase domain protein; KEGG: bxe:Bxe_A3979 putative glycolate oxidase, subunit GlcE.


ensembl_gene_id: Bphy_2516
symbol: Bphy_2516
gene_biotype: protein_coding
description:
  PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bxe:Bxe_A3980 putative glycolate oxidase iron-sulfur subunit.


ensembl_gene_id: Bphy_2517
symbol: Bphy_2517
gene_biotype: protein_coding
description:
  Alanine racemase domain protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: Bphy_2518
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: Bphy_2519
symbol: ubiA
gene_biotype: protein_coding
description:
  4-hydroxybenzoate polyprenyl transferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.


ensembl_gene_id: Bphy_2520
symbol: Bphy_2520
gene_biotype: protein_coding
description:
  PFAM: Ferritin Dps family protein; KEGG: bxe:Bxe_A3984 putative ferritin DPS-family DNA binding protein; Belongs to the Dps family.


ensembl_gene_id: Bphy_2522
symbol: Bphy_2522
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A3987 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_2523
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: Bphy_2524
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine--tRNA-ribosyltransferase- isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: Bphy_2525
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: Bphy_2526
symbol: yajC
gene_biotype: protein_coding
description:
  Preprotein translocase, YajC subunit; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.


ensembl_gene_id: Bphy_2527
symbol: secD
gene_biotype: protein_coding
description:
  Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: Bphy_2528
symbol: secF
gene_biotype: protein_coding
description:
  Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: Bphy_2529
symbol: Bphy_2529
gene_biotype: protein_coding
description:
  PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A3994 major facilitator superfamily (MFS) metabolite/H+ symporter.


ensembl_gene_id: Bphy_2535
symbol: Bphy_2535
gene_biotype: protein_coding
description:
  PFAM: Mammalian cell entry related domain protein; KEGG: bxe:Bxe_A4000 putative paraquat-inducible protein.


ensembl_gene_id: Bphy_2537
symbol: Bphy_2537
gene_biotype: protein_coding
description:
  PFAM: putative RNA methylase; THUMP domain protein; KEGG: bxe:Bxe_A4003 hypothetical protein; Belongs to the methyltransferase superfamily.


ensembl_gene_id: Bphy_2538
symbol: Bphy_2538
gene_biotype: protein_coding
description:
  PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_A4004 hypothetical protein.


ensembl_gene_id: Bphy_2539
symbol: Bphy_2539
gene_biotype: protein_coding
description:
  PFAM: Helix-turn-helix type 11 domain protein; KEGG: bxe:Bxe_A4005 putative transcriptional regulator.


ensembl_gene_id: Bphy_2541
symbol: Bphy_2541
gene_biotype: protein_coding
description:
  NAD(P)(+) transhydrogenase (AB-specific); The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.


ensembl_gene_id: Bphy_2543
symbol: Bphy_2543
gene_biotype: protein_coding
description:
  NAD(P)(+) transhydrogenase (AB-specific); PFAM: alanine dehydrogenase/PNT domain protein; KEGG: bxe:Bxe_A4008 putative NAD(P) transhydrogenase, alpha subunit.


ensembl_gene_id: Bphy_2544
symbol: nudJ
gene_biotype: protein_coding
description:
  PFAM: NUDIX hydrolase; KEGG: bxe:Bxe_A4009 putative NTP pyrophosphohydrolases including oxidative damage repair enzymes; Belongs to the Nudix hydrolase family. NudJ subfamily.


ensembl_gene_id: Bphy_2545
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: Bphy_2546
symbol: Bphy_2546
gene_biotype: protein_coding
description:
  PFAM: ferredoxin-dependent glutamate synthase; KEGG: bxe:Bxe_A4011 glutamate synthase (NADPH); Belongs to the glutamate synthase family.


ensembl_gene_id: Bphy_2548
symbol: Bphy_2548
gene_biotype: protein_coding
description:
  PFAM: Glutathione S-transferase domain; KEGG: bam:Bamb_0589 glutathione S-transferase, N-terminal domain.


ensembl_gene_id: Bphy_2549
symbol: Bphy_2549
gene_biotype: protein_coding
description:
  PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: bxe:Bxe_A0623 putative, Xaa-Pro aminopeptidase; Belongs to the peptidase M24B family.


ensembl_gene_id: Bphy_2550
symbol: Bphy_2550
gene_biotype: protein_coding
description:
  TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; KEGG: bxe:Bxe_A0622 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6.


ensembl_gene_id: Bphy_2551
symbol: dusB
gene_biotype: protein_coding
description:
  TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the Dus family. DusB subfamily.


ensembl_gene_id: Bphy_2552
symbol: Bphy_2552
gene_biotype: protein_coding
description:
  PFAM: helix-turn-helix Fis-type; KEGG: bxe:Bxe_A0620 transcriptional regulator, fis family; Belongs to the transcriptional regulatory Fis family.


ensembl_gene_id: Bphy_2553
symbol: purH
gene_biotype: protein_coding
description:
  KEGG: bte:BTH_I1250 bifunctional purine biosynthesis protein PurH; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: MGS domain protein; AICARFT/IMPCHase bienzyme formylation region.


ensembl_gene_id: Bphy_2554
symbol: ruvC
gene_biotype: protein_coding
description:
  Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: Bphy_2555
symbol: Bphy_2555
gene_biotype: protein_coding
description:
  PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_B2895 lysine exporter family protein (LysE/YggA).


ensembl_gene_id: Bphy_2556
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: Bphy_2557
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: Bphy_2559
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: Bphy_2560
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.


ensembl_gene_id: Bphy_2561
symbol: anmK
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0075; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.


ensembl_gene_id: Bphy_2563
symbol: rpsI
gene_biotype: protein_coding
description:
  PFAM: ribosomal protein S9; KEGG: bxe:Bxe_A0608 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.


ensembl_gene_id: Bphy_2564
symbol: rplM
gene_biotype: protein_coding
description:
  Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: Bphy_2567
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase, homodimeric type; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.


ensembl_gene_id: Bphy_2568
symbol: Bphy_2568
gene_biotype: protein_coding
description:
  PFAM: glutamine amidotransferase class-II; KEGG: bxe:Bxe_A0601 putative glutatmine aminotransferase.


ensembl_gene_id: Bphy_2570
symbol: Bphy_2570
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A0600 ABC His/Glu/Gln/Arg/opine family transporter, ATPase subunit.


ensembl_gene_id: Bphy_2571
symbol: Bphy_2571
gene_biotype: protein_coding
description:
  TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_A0599 ABC His/Glu/Gln/Arg/opine family transporter, inner membrane subunit.


ensembl_gene_id: Bphy_2572
symbol: Bphy_2572
gene_biotype: protein_coding
description:
  TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_A0598 ABC His/Glu/Gln/Arg/opine family transporter, inner membrane subunit.


ensembl_gene_id: Bphy_2573
symbol: Bphy_2573
gene_biotype: protein_coding
description:
  PFAM: extracellular solute-binding protein family 3; KEGG: bxe:Bxe_A0597 ABC glutamate/aspartate transporter, periplasmic ligand binding protein.


ensembl_gene_id: Bphy_2574
symbol: Bphy_2574
gene_biotype: protein_coding
description:
  PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: bxe:Bxe_A0596 putative Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: Bphy_2575
symbol: Bphy_2575
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A0595 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_2576
symbol: Bphy_2576
gene_biotype: protein_coding
description:
  TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase domain protein; KEGG: bxe:Bxe_A0593 adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.


ensembl_gene_id: Bphy_2577
symbol: Bphy_2577
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_A0592 carbohydrate kinase, thermoresistant glucokinase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase.


ensembl_gene_id: Bphy_2578
symbol: Bphy_2578
gene_biotype: protein_coding
description:
  TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; KEGG: bxe:Bxe_A0591 Na+/gluconate symporter, GntP.


ensembl_gene_id: Bphy_2579
symbol: Bphy_2579
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_A0590 KDPG and KHG aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase.


ensembl_gene_id: Bphy_2580
symbol: edd
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.


ensembl_gene_id: Bphy_2581
symbol: Bphy_2581
gene_biotype: protein_coding
description:
  Transcriptional regulator, RpiR family; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bxe:Bxe_A0588 transcriptional regulator, RpiR family.


ensembl_gene_id: Bphy_2582
symbol: Bphy_2582
gene_biotype: protein_coding
description:
  PFAM: YadA domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: bxe:Bxe_A0586 putative membrane-anchored cell surface protein, haemagluttinin.


ensembl_gene_id: Bphy_2585
symbol: proA
gene_biotype: protein_coding
description:
  Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: Bphy_2586
symbol: Bphy_2586
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_A0578 DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta.


ensembl_gene_id: Bphy_2587
symbol: lptE
gene_biotype: protein_coding
description:
  Rare lipoprotein B; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane; Belongs to the LptE lipoprotein family.


ensembl_gene_id: Bphy_2588
symbol: leuS
gene_biotype: protein_coding
description:
  TIGRFAM: leucyl-tRNA synthetase; KEGG: bvi:Bcep1808_0622 leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: Bphy_2589
symbol: Bphy_2589
gene_biotype: protein_coding
description:
  PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bxe:Bxe_A0575 biopolymer transport protein ExbD/TolR.


ensembl_gene_id: Bphy_2590
symbol: Bphy_2590
gene_biotype: protein_coding
description:
  PFAM: MotA/TolQ/ExbB proton channel; KEGG: bxe:Bxe_A0574 MotA/TolQ/ExbB proton channel family protein.


ensembl_gene_id: Bphy_2591
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate.


ensembl_gene_id: Bphy_2592
symbol: bamE
gene_biotype: protein_coding
description:
  SmpA/OmlA domain protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: Bphy_2593
symbol: fur-2
gene_biotype: protein_coding
description:
  Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: bxe:Bxe_A0571 ferric uptake regulator (FUR) family; Belongs to the Fur family.


ensembl_gene_id: Bphy_2595
symbol: alc-2
gene_biotype: protein_coding
description:
  TIGRFAM: allantoicase; PFAM: Allantoicase region; KEGG: bxe:Bxe_A0569 allantoicase; Belongs to the allantoicase family.


ensembl_gene_id: Bphy_2596
symbol: Bphy_2596
gene_biotype: protein_coding
description:
  PFAM: sodium:dicarboxylate symporter; KEGG: bxe:Bxe_A0568 Na+/C4-dicarboxylate symporter, DctA, DAACS family; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: Bphy_2597
symbol: Bphy_2597
gene_biotype: protein_coding
description:
  PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bmn:BMA10247_3324 transcriptional regulator, GntR family.


ensembl_gene_id: Bphy_2598
symbol: Bphy_2598
gene_biotype: protein_coding
description:
  KEGG: bcn:Bcen_0156 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: Bphy_2599
symbol: Bphy_2599
gene_biotype: protein_coding
description:
  TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: bxe:Bxe_A0565 transketolase; Belongs to the transketolase family.


ensembl_gene_id: Bphy_2600
symbol: Bphy_2600
gene_biotype: protein_coding
description:
  PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_A0562 putative glyoxalase/bleomycin resistance protein, dioxygenase superfamily.


ensembl_gene_id: Bphy_2601
symbol: Bphy_2601
gene_biotype: protein_coding
description:
  Protein of unknown function DUF558; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: Bphy_2603
symbol: Bphy_2603
gene_biotype: protein_coding
description:
  PFAM: guanine-specific ribonuclease N1 and T1; KEGG: bxe:Bxe_A0559 putative guanyl-specific ribonuclease signal peptide protein.


ensembl_gene_id: Bphy_2604
symbol: Bphy_2604
gene_biotype: protein_coding
description:
  PFAM: phosphate acetyl/butaryl transferase; malic protein domain protein; malic protein NAD-binding; KEGG: bxe:Bxe_A0557 malate dehydrogenase (oxaloacetate decarboxylating) (NADP+), phosphate acetyltransferase.


ensembl_gene_id: Bphy_2605
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: Bphy_2607
symbol: Bphy_2607
gene_biotype: protein_coding
description:
  PFAM: CinA domain protein; KEGG: bxe:Bxe_A0554 putative competence-damaged protein, CinA-like; Belongs to the CinA family.


ensembl_gene_id: Bphy_2609
symbol: pyrF
gene_biotype: protein_coding
description:
  TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: bxe:Bxe_A0552 putative orotidine 5'-phosphate decarboxylase, PyrF; Belongs to the OMP decarboxylase family. Type 2 subfamily.


ensembl_gene_id: Bphy_2611
symbol: Bphy_2611
gene_biotype: protein_coding
description:
  PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bxe:Bxe_A0550 putative regucalcin family protein.


ensembl_gene_id: Bphy_2612
symbol: Bphy_2612
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_A0549 putative short-chain dehydrogenase/reductase, FabG-like.


ensembl_gene_id: Bphy_2613
symbol: Bphy_2613
gene_biotype: protein_coding
description:
  Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A0548 ABC sugar (arabinose) transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Bphy_2614
symbol: araG
gene_biotype: protein_coding
description:
  ABC transporter related; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family.


ensembl_gene_id: Bphy_2615
symbol: Bphy_2615
gene_biotype: protein_coding
description:
  Monosaccharide-transporting ATPase; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bxe:Bxe_A0546 ABC sugar(arabinose) transporter, periplasmic ligand binding protein.


ensembl_gene_id: Bphy_2616
symbol: Bphy_2616
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_A0545 putative short-chain dehydrogenase/reductase, FabG-like.


ensembl_gene_id: Bphy_2617
symbol: Bphy_2617
gene_biotype: protein_coding
description:
  PFAM: KDPG and KHG aldolase; KEGG: bxe:Bxe_A0544 putative 2-keto-3-deoxy-6-phosphogluconate aldolase, DgoA-like.


ensembl_gene_id: Bphy_2618
symbol: Bphy_2618
gene_biotype: protein_coding
description:
  PFAM: 2-keto-3-deoxy-galactonokinase; KEGG: bxe:Bxe_A0543 putative 2-dehydro-3-deoxygalactonate kinase, DgoK-like.


ensembl_gene_id: Bphy_2619
symbol: Bphy_2619
gene_biotype: protein_coding
description:
  PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bxe:Bxe_A0542 putative transcriptional regulator, IclR family.


ensembl_gene_id: Bphy_2620
symbol: Bphy_2620
gene_biotype: protein_coding
description:
  PFAM: OmpA domain protein transmembrane region-containing protein; KEGG: bxe:Bxe_A0088 hypothetical protein.


ensembl_gene_id: Bphy_2621
symbol: mtgA
gene_biotype: protein_coding
description:
  Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.


ensembl_gene_id: Bphy_2622
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: Bphy_2625
symbol: mpl
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramate; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate. Belongs to the MurCDEF family. Mpl subfamily.


ensembl_gene_id: Bphy_2627
symbol: Bphy_2627
gene_biotype: protein_coding
description:
  Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bxe:Bxe_A0534 putative thioredoxin.


ensembl_gene_id: Bphy_2628
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: Bphy_2629
symbol: Bphy_2629
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: Bphy_2630
symbol: Bphy_2630
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: Bphy_2631
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: Bphy_2633
symbol: tpx
gene_biotype: protein_coding
description:
  Redoxin domain protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.


ensembl_gene_id: Bphy_2638
symbol: Bphy_2638
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.


ensembl_gene_id: Bphy_2639
symbol: Bphy_2639
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: Bphy_2640
symbol: Bphy_2640
gene_biotype: protein_coding
description:
  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: bxe:Bxe_A0519 putative anhydro-N-acetylmuramyl-tripeptide amidase, AmpD (negative regulator of AmpC).


ensembl_gene_id: Bphy_2643
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual componen [...]


ensembl_gene_id: Bphy_2644
symbol: Bphy_2644
gene_biotype: protein_coding
description:
  PFAM: phosphoribosyltransferase; KEGG: bxe:Bxe_A0515 putative hypoxanthine phosphoribosyltransferase.


ensembl_gene_id: Bphy_2645
symbol: Bphy_2645
gene_biotype: protein_coding
description:
  PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: bxe:Bxe_A0514 multiple antibiotic resistance (MarC)-related protein, putative transporter.


ensembl_gene_id: Bphy_2646
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]


ensembl_gene_id: Bphy_2647
symbol: rppH
gene_biotype: protein_coding
description:
  NUDIX hydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.


ensembl_gene_id: Bphy_2649
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: Bphy_2650
symbol: obg
gene_biotype: protein_coding
description:
  GTP-binding protein Obg/CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: Bphy_2651
symbol: rpmA
gene_biotype: protein_coding
description:
  PFAM: ribosomal protein L27; KEGG: bxe:Bxe_A0508 ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.


ensembl_gene_id: Bphy_2652
symbol: rplU
gene_biotype: protein_coding
description:
  Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: Bphy_2653
symbol: Bphy_2653
gene_biotype: protein_coding
description:
  PFAM: Polyprenyl synthetase; KEGG: bxe:Bxe_A0506 octylprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: Bphy_2654
symbol: Bphy_2654
gene_biotype: protein_coding
description:
  PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: bxe:Bxe_A0505 putative Mg2+ and Co2+ transporter, HlyC/CorC (HCC) family.


ensembl_gene_id: Bphy_2655
symbol: Bphy_2655
gene_biotype: protein_coding
description:
  PFAM: type II secretion system protein E; SMART: AAA ATPase; KEGG: bxe:Bxe_A0504 type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB.


ensembl_gene_id: Bphy_2656
symbol: Bphy_2656
gene_biotype: protein_coding
description:
  PFAM: type II secretion system protein; KEGG: bxe:Bxe_A0503 type II secretion system, subunit F / type IV pilus assembly protein TapC/PilC.


ensembl_gene_id: Bphy_2657
symbol: Bphy_2657
gene_biotype: protein_coding
description:
  Prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.


ensembl_gene_id: Bphy_2658
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: Bphy_2659
symbol: zapD
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1342; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity.


ensembl_gene_id: Bphy_2660
symbol: yacG
gene_biotype: protein_coding
description:
  Protein of unknown function DUF329; Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C- terminal domain of GyrB, which probably disrupts DNA binding by the gyrase.


ensembl_gene_id: Bphy_2661
symbol: Bphy_2661
gene_biotype: protein_coding
description:
  PFAM: NUDIX hydrolase; KEGG: bxe:Bxe_A0498 putative mutator protein(7,8-dihydro-8-oxoguanine-triphosphatase), MutT.


ensembl_gene_id: Bphy_2662
symbol: Bphy_2662
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF815; SMART: AAA ATPase; KEGG: bxe:Bxe_A0497 putative ATP/GTP-binding protein, AAA ATPase superfamily.


ensembl_gene_id: Bphy_2663
symbol: argJ
gene_biotype: protein_coding
description:
  Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: Bphy_2664
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family.


ensembl_gene_id: Bphy_2666
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-0-acyl N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: Bphy_2667
symbol: Bphy_2667
gene_biotype: protein_coding
description:
  Redoxin domain protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.


ensembl_gene_id: Bphy_2668
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: Bphy_2669
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: Bphy_2670
symbol: ftsQ
gene_biotype: protein_coding
description:
  Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly.


ensembl_gene_id: Bphy_2673
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: Bphy_2674
symbol: ftsW
gene_biotype: protein_coding
description:
  Cell division protein FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily.


ensembl_gene_id: Bphy_2675
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: Bphy_2676
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: Bphy_2677
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: Bphy_2678
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramyl-tripeptide synthetase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: Bphy_2679
symbol: ftsI
gene_biotype: protein_coding
description:
  Peptidoglycan glycosyltransferase; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum.


ensembl_gene_id: Bphy_2680
symbol: ftsL
gene_biotype: protein_coding
description:
  Cell division protein FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: Bphy_2681
symbol: rsmH
gene_biotype: protein_coding
description:
  S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: Bphy_2682
symbol: mraZ
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function UPF0040; KEGG: bcn:Bcen_0068 protein of unknown function UPF0040; Belongs to the MraZ family.


ensembl_gene_id: Bphy_2683
symbol: coq7
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.


ensembl_gene_id: Bphy_2685
symbol: Bphy_2685
gene_biotype: protein_coding
description:
  PFAM: AMP-dependent synthetase and ligase; KEGG: bxe:Bxe_A0474 putative long-chain-fatty-acid-CoA-ligase, FadD.


ensembl_gene_id: Bphy_2686
symbol: Bphy_2686
gene_biotype: protein_coding
description:
  PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: bxe:Bxe_A0473 putative molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: Bphy_2687
symbol: Bphy_2687
gene_biotype: protein_coding
description:
  TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bxe:Bxe_A0472 putative hippurate carboxypeptidase, M20D-type.


ensembl_gene_id: Bphy_2688
symbol: Bphy_2688
gene_biotype: protein_coding
description:
  PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bxe:Bxe_A0471 putative enoyl-CoA hydratase I (PaaF); Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Bphy_2689
symbol: Bphy_2689
gene_biotype: protein_coding
description:
  TIGRFAM: phenylacetic acid degradation protein paaN; PFAM: Aldehyde Dehydrogenase; KEGG: bxe:Bxe_A0470 phenylacetic acid ring-opening protein (PaaZ').


ensembl_gene_id: Bphy_2690
symbol: Bphy_2690
gene_biotype: protein_coding
description:
  TIGRFAM: acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase; PFAM: Thiolase; KEGG: bxe:Bxe_A0469 ketoathiolase (PaaJ); Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Bphy_2691
symbol: Bphy_2691
gene_biotype: protein_coding
description:
  TIGRFAM: phenylacetate degradation, enoyl-CoA hydratase paaB; PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bxe:Bxe_A0468 putative enoyl-CoA hydratase II (PaaG); Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Bphy_2692
symbol: Bphy_2692
gene_biotype: protein_coding
description:
  TIGRFAM: phenylacetic acid degradation protein PaaD; PFAM: thioesterase superfamily protein; KEGG: bxe:Bxe_A0467 phenylacetic acid degradation-related thioesterase (PaaI).


ensembl_gene_id: Bphy_2693
symbol: Bphy_2693
gene_biotype: protein_coding
description:
  phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).


ensembl_gene_id: Bphy_2695
symbol: apaG
gene_biotype: protein_coding
description:
  PFAM: ApaG domain protein; KEGG: bxe:Bxe_A0464 protein ApaG, Mg2 efflux/Co2 resistance-related protein, CorD-like.


ensembl_gene_id: Bphy_2696
symbol: Bphy_2696
gene_biotype: protein_coding
description:
  PFAM: ribulose-phosphate 3-epimerase; KEGG: bxe:Bxe_A0463 ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.


ensembl_gene_id: Bphy_2697
symbol: gph
gene_biotype: protein_coding
description:
  Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.


ensembl_gene_id: Bphy_2698
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...]


ensembl_gene_id: Bphy_2699
symbol: Bphy_2699
gene_biotype: protein_coding
description:
  TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: bxe:Bxe_A0460 glutamine amidotransferase of anthranilate synthase.


ensembl_gene_id: Bphy_2700
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: Bphy_2701
symbol: trpC
gene_biotype: protein_coding
description:
  PFAM: Indole-3-glycerol phosphate synthase; KEGG: bxe:Bxe_A0458 indole-3-glycerol-phosphate synthase; Belongs to the TrpC family.


ensembl_gene_id: Bphy_2703
symbol: ung
gene_biotype: protein_coding
description:
  uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: Bphy_2704
symbol: azoR
gene_biotype: protein_coding
description:
  NAD(P)H dehydrogenase (quinone); Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.


ensembl_gene_id: Bphy_2705
symbol: Bphy_2705
gene_biotype: protein_coding
description:
  PFAM: PDZ/DHR/GLGF domain protein; peptidase M61 domain protein; KEGG: bxe:Bxe_A0454 metalloprotease, zinc binding.


ensembl_gene_id: Bphy_2706
symbol: Bphy_2706
gene_biotype: protein_coding
description:
  Putative thiol-disulfide interchange protein, DsbC; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.


ensembl_gene_id: Bphy_2707
symbol: Bphy_2707
gene_biotype: protein_coding
description:
  TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; KEGG: bxe:Bxe_A0452 putative 2-polyprenyl-3-methyl-6-methoxyphenolhydroxylase, UbiH/VisC-like.


ensembl_gene_id: Bphy_2708
symbol: ychF
gene_biotype: protein_coding
description:
  GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: Bphy_2709
symbol: Bphy_2709
gene_biotype: protein_coding
description:
  PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_A0448 ABC sugar transporter, periplasmic ligand binding protein.


ensembl_gene_id: Bphy_2710
symbol: Bphy_2710
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_A0447 ABC sugar transporter, inner membrane subunit.


ensembl_gene_id: Bphy_2711
symbol: ugpE
gene_biotype: protein_coding
description:
  Binding-protein-dependent transport systems inner membrane component; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.


ensembl_gene_id: Bphy_2712
symbol: ugpC
gene_biotype: protein_coding
description:
  ABC transporter related; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.


ensembl_gene_id: Bphy_2713
symbol: Bphy_2713
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bte:BTH_I2924 ABC transporter, ATP-binding protein.


ensembl_gene_id: Bphy_2715
symbol: Bphy_2715
gene_biotype: protein_coding
description:
  TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bxe:Bxe_A0441 putative L-2-haloalkanoic acid dehalogenase (HAD aspartate-nucleophile hydrolase).


ensembl_gene_id: Bphy_2717
symbol: Bphy_2717
gene_biotype: protein_coding
description:
  Peptidase M24; PFAM: creatinase; peptidase M24; KEGG: bxe:Bxe_A0440 putative Xaa-Pro aminopeptidase.


ensembl_gene_id: Bphy_2719
symbol: Bphy_2719
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bxe:Bxe_A0438 two component transcriptional regulator, winged helix family.


ensembl_gene_id: Bphy_2720
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: Bphy_2721
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: Bphy_2722
symbol: prmC
gene_biotype: protein_coding
description:
  protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: Bphy_2723
symbol: Bphy_2723
gene_biotype: protein_coding
description:
  TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: bam:Bamb_0412 glutaredoxin-like protein; Belongs to the glutaredoxin family. Monothiol subfamily.


ensembl_gene_id: Bphy_2724
symbol: ubiX
gene_biotype: protein_coding
description:
  3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: Bphy_2725
symbol: Bphy_2725
gene_biotype: protein_coding
description:
  PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: bxe:Bxe_A0432 putative 4,5-extradiol aromatic ring fission dioxygenase, DodA/LigB-like.


ensembl_gene_id: Bphy_2727
symbol: Bphy_2727
gene_biotype: protein_coding
description:
  PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bxe:Bxe_A0430 cold-shock DNA-binding domain protein.


ensembl_gene_id: Bphy_2729
symbol: Bphy_2729
gene_biotype: protein_coding
description:
  PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A0428 major facilitator superfamily (MFS) sugar transporter.


ensembl_gene_id: Bphy_2731
symbol: Bphy_2731
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A0426 major facilitator superfamily (MFS) transporter, monocarboxylates.


ensembl_gene_id: Bphy_2737
symbol: Bphy_2737
gene_biotype: protein_coding
description:
  PFAM: HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_A0420 putative transmembrane protein, NAD(FAD)-binding.


ensembl_gene_id: Bphy_2738
symbol: Bphy_2738
gene_biotype: protein_coding
description:
  PFAM: methyltransferase small; KEGG: bxe:Bxe_A0419 hypothetical protein; Belongs to the methyltransferase superfamily.


ensembl_gene_id: Bphy_2742
symbol: Bphy_2742
gene_biotype: protein_coding
description:
  Cytochrome b/b6 domain; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: Bphy_2743
symbol: Bphy_2743
gene_biotype: protein_coding
description:
  Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: Bphy_2745
symbol: Bphy_2745
gene_biotype: protein_coding
description:
  2-alkenal reductase; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: bxe:Bxe_A0412 putative exported serine protease, HtrA/AlgW-like; Belongs to the peptidase S1C family.


ensembl_gene_id: Bphy_2746
symbol: tatC
gene_biotype: protein_coding
description:
  Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: Bphy_2747
symbol: tatB
gene_biotype: protein_coding
description:
  Twin-arginine translocation protein, TatB subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.


ensembl_gene_id: Bphy_2748
symbol: tatA
gene_biotype: protein_coding
description:
  Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: Bphy_2749
symbol: Bphy_2749
gene_biotype: protein_coding
description:
  PFAM: histidine triad (HIT) protein; KEGG: bxe:Bxe_A0408 putative histidine triad (HIT) protein, HitA.


ensembl_gene_id: Bphy_2751
symbol: hisE
gene_biotype: protein_coding
description:
  TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-ATP pyrophosphohydrolase; KEGG: bxe:Bxe_A0406 putative phosphoribosyl-ATP pyrophosphohydrolase HisE.


ensembl_gene_id: Bphy_2752
symbol: hisI
gene_biotype: protein_coding
description:
  Phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.


ensembl_gene_id: Bphy_2753
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazoleglycerol phosphate synthase, cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: Bphy_2754
symbol: hisA
gene_biotype: protein_coding
description:
  TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; KEGG: bxe:Bxe_A0403 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase.


ensembl_gene_id: Bphy_2755
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: Bphy_2756
symbol: Bphy_2756
gene_biotype: protein_coding
description:
  PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: bxe:Bxe_A0401 multiple antibiotic resistance transporter, MarC family.


ensembl_gene_id: Bphy_2757
symbol: hisB
gene_biotype: protein_coding
description:
  PFAM: imidazoleglycerol-phosphate dehydratase; KEGG: bxe:Bxe_A0400 imidazoleglycerol-phosphate dehydratase.


ensembl_gene_id: Bphy_2758
symbol: hisC-3
gene_biotype: protein_coding
description:
  TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: bxe:Bxe_A0399 histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: Bphy_2759
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: Bphy_2760
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: Bphy_2761
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: Bphy_2762
symbol: Bphy_2762
gene_biotype: protein_coding
description:
  PFAM: BolA family protein; KEGG: bxe:Bxe_A0395 putative morphogene protein, BolA; Belongs to the BolA/IbaG family.


ensembl_gene_id: Bphy_2763
symbol: Bphy_2763
gene_biotype: protein_coding
description:
  PFAM: ABC-2 type transporter; KEGG: bxe:Bxe_A0394 ABC multidrug efflux pump, inner membrane subunit.


ensembl_gene_id: Bphy_2764
symbol: Bphy_2764
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A0393 ABC multidrug efflux pump, ATPase subunit.


ensembl_gene_id: Bphy_2766
symbol: Bphy_2766
gene_biotype: protein_coding
description:
  PFAM: toluene tolerance family protein; KEGG: bxe:Bxe_A0391 ABC transporter, periplasmic ligand binding protein, toluene tolerance Ttg2D-like.


ensembl_gene_id: Bphy_2768
symbol: Bphy_2768
gene_biotype: protein_coding
description:
  PFAM: Mammalian cell entry related domain protein; KEGG: bxe:Bxe_A0389 putative signal peptide protein, toluene tolerance Ttg2C-like.


ensembl_gene_id: Bphy_2769
symbol: Bphy_2769
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF140; KEGG: bxe:Bxe_A0388 putative ABC transporter, inner membrane subunit, toluene tolerance Ttg2B-like.


ensembl_gene_id: Bphy_2770
symbol: Bphy_2770
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A0387 ABC transporter, ATPase subunit, toluene tolerance Ttg2A-like.


ensembl_gene_id: Bphy_2771
symbol: Bphy_2771
gene_biotype: protein_coding
description:
  Thiamine-phosphate diphosphorylase; PFAM: thiamine monophosphate synthase; KEGG: bxe:Bxe_A0386 putative thiamin-phosphate pyrophosphorylase, ThiE.


ensembl_gene_id: Bphy_2772
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole biosynthesis family protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: Bphy_2773
symbol: Bphy_2773
gene_biotype: protein_coding
description:
  TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: bxe:Bxe_A0384 putative sulfur transfer protein involved in thiamine biosynthesis, ThiS.


ensembl_gene_id: Bphy_2775
symbol: Bphy_2775
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SbmABacA family protein; ABC transporter domain protein; SMART: AAA ATPase; KEGG: bte:BTH_I3009 ABC transporter, ATP-binding protein.


ensembl_gene_id: Bphy_2778
symbol: Bphy_2778
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bxe:Bxe_A0378 two component transcriptional regulator, winged helix family.


ensembl_gene_id: Bphy_2779
symbol: flgH
gene_biotype: protein_coding
description:
  Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: Bphy_2783
symbol: Bphy_2783
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bxe:Bxe_A0373 two component transcriptional regulator, winged helix family.


ensembl_gene_id: Bphy_2784
symbol: Bphy_2784
gene_biotype: protein_coding
description:
  Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_A0372 signal transduction histidine kinases (STHK).


ensembl_gene_id: Bphy_2786
symbol: Bphy_2786
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: Bphy_2787
symbol: Bphy_2787
gene_biotype: protein_coding
description:
  TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_A0366 glutamate synthase, NADH/NADPH, small subunit 1.


ensembl_gene_id: Bphy_2788
symbol: Bphy_2788
gene_biotype: protein_coding
description:
  PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: bxe:Bxe_A0365 glutamate synthase (ferredoxin).


ensembl_gene_id: Bphy_2791
symbol: Bphy_2791
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF883 ElaB; KEGG: bxe:Bxe_A0362 putative membrane protein, ElaB-like.


ensembl_gene_id: Bphy_2792
symbol: Bphy_2792
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_A0361 deoxyguanosinetriphosphate triphosphohydrolase; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; Belongs to the dGTPase family. Type 2 subfamily.


ensembl_gene_id: Bphy_2793
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: Bphy_2794
symbol: aroK-2
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: Bphy_2795
symbol: Bphy_2795
gene_biotype: protein_coding
description:
  TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; KEGG: bxe:Bxe_A0358 putative fimbrial type-4 assembly signal peptide, PilQ-like.


ensembl_gene_id: Bphy_2799
symbol: Bphy_2799
gene_biotype: protein_coding
description:
  Penicillin-binding protein, 1A family; KEGG: bxe:Bxe_A0354 putative penicillin-binding 1 (peptoglycansynthetase) transmembrane protein, MrcA; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase.


ensembl_gene_id: Bphy_2800
symbol: cyaY
gene_biotype: protein_coding
description:
  Iron donor protein CyaY; Involved in iron-sulfur (Fe-S) cluster assembly. May act as a regulator of Fe-S biogenesis.


ensembl_gene_id: Bphy_2802
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: Bphy_2803
symbol: msrQ
gene_biotype: protein_coding
description:
  Ferric reductase domain protein transmembrane component domain; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the r [...]


ensembl_gene_id: Bphy_2804
symbol: msrP
gene_biotype: protein_coding
description:
  Oxidoreductase molybdopterin binding; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce b [...]


ensembl_gene_id: Bphy_2805
symbol: Bphy_2805
gene_biotype: protein_coding
description:
  TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein; KEGG: bxe:Bxe_A0348 cytochrome c assembly protein.


ensembl_gene_id: Bphy_2808
symbol: engB
gene_biotype: protein_coding
description:
  GTP-binding protein HSR1-related; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: Bphy_2809
symbol: Bphy_2809
gene_biotype: protein_coding
description:
  Porphobilinogen synthase; PFAM: delta-aminolevulinic acid dehydratase; KEGG: bxe:Bxe_A0344 porphobilinogen synthase; Belongs to the ALAD family.


ensembl_gene_id: Bphy_2810
symbol: dsbD
gene_biotype: protein_coding
description:
  Protein-disulfide reductase; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily.


ensembl_gene_id: Bphy_2811
symbol: Bphy_2811
gene_biotype: protein_coding
description:
  PFAM: CutA1 divalent ion tolerance protein; KEGG: bxe:Bxe_A0342 periplasmic cytochrome biogenesis protein.


ensembl_gene_id: Bphy_2813
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: Bphy_2814
symbol: rpsD
gene_biotype: protein_coding
description:
  Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: Bphy_2815
symbol: rpsK
gene_biotype: protein_coding
description:
  Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: Bphy_2816
symbol: rpsM
gene_biotype: protein_coding
description:
  Ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: Bphy_2817
symbol: rpmJ
gene_biotype: protein_coding
description:
  PFAM: ribosomal protein L36; KEGG: bur:Bcep18194_A3469 ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.


ensembl_gene_id: Bphy_2818
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: Bphy_2819
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: Bphy_2820
symbol: rplO
gene_biotype: protein_coding
description:
  Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: Bphy_2822
symbol: rpsE
gene_biotype: protein_coding
description:
  Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: Bphy_2823
symbol: rplR
gene_biotype: protein_coding
description:
  Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: Bphy_2824
symbol: rplF
gene_biotype: protein_coding
description:
  Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: Bphy_2825
symbol: rpsH
gene_biotype: protein_coding
description:
  Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: Bphy_2826
symbol: rpsN
gene_biotype: protein_coding
description:
  Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.


ensembl_gene_id: Bphy_2827
symbol: rplE
gene_biotype: protein_coding
description:
  Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: Bphy_2828
symbol: rplX
gene_biotype: protein_coding
description:
  Ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.


ensembl_gene_id: Bphy_2829
symbol: rplN
gene_biotype: protein_coding
description:
  Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: Bphy_2831
symbol: rpsQ
gene_biotype: protein_coding
description:
  Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: Bphy_2832
symbol: rpmC
gene_biotype: protein_coding
description:
  PFAM: ribosomal protein L29; KEGG: bxe:Bxe_A0322 ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.


ensembl_gene_id: Bphy_2833
symbol: rplP
gene_biotype: protein_coding
description:
  Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: Bphy_2834
symbol: rpsC
gene_biotype: protein_coding
description:
  Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: Bphy_2835
symbol: rplV
gene_biotype: protein_coding
description:
  Ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity).


ensembl_gene_id: Bphy_2836
symbol: rpsS
gene_biotype: protein_coding
description:
  Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: Bphy_2837
symbol: rplB
gene_biotype: protein_coding
description:
  Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: Bphy_2838
symbol: rplW
gene_biotype: protein_coding
description:
  Ribosomal protein L25/L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: Bphy_2839
symbol: rplD
gene_biotype: protein_coding
description:
  Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.


ensembl_gene_id: Bphy_2840
symbol: rplC
gene_biotype: protein_coding
description:
  Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.


ensembl_gene_id: Bphy_2841
symbol: rpsJ
gene_biotype: protein_coding
description:
  Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: Bphy_2842
symbol: tuf
gene_biotype: protein_coding
description:
  Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: Bphy_2844
symbol: rpsG
gene_biotype: protein_coding
description:
  Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: Bphy_2846
symbol: Bphy_2846
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_A0308 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases.


ensembl_gene_id: Bphy_2847
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: Bphy_2848
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: Bphy_2849
symbol: rplL
gene_biotype: protein_coding
description:
  Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: Bphy_2850
symbol: rplJ
gene_biotype: protein_coding
description:
  Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: Bphy_2851
symbol: rplA
gene_biotype: protein_coding
description:
  Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: Bphy_2852
symbol: rplK
gene_biotype: protein_coding
description:
  Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: Bphy_2853
symbol: nusG
gene_biotype: protein_coding
description:
  NusG antitermination factor; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: Bphy_2854
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family.


ensembl_gene_id: Bphy_2855
symbol: Bphy_2855
gene_biotype: protein_coding
description:
  TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein; KEGG: bam:Bamb_0265 translation elongation factor Tu.


ensembl_gene_id: Bphy_2857
symbol: Bphy_2857
gene_biotype: protein_coding
description:
  TIGRFAM: phenylacetate-CoA oxygenase, PaaG subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: bxe:Bxe_A0295 phenylacetic acid degradation protein PaaA.


ensembl_gene_id: Bphy_2858
symbol: Bphy_2858
gene_biotype: protein_coding
description:
  TIGRFAM: phenylacetate-CoA oxygenase, PaaH subunit; PFAM: phenylacetic acid degradation B; KEGG: bur:Bcep18194_A3428 phenylacetic acid degradation B.


ensembl_gene_id: Bphy_2859
symbol: Bphy_2859
gene_biotype: protein_coding
description:
  TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: bxe:Bxe_A0293 phenylacetic acid degradation protein PaaC.


ensembl_gene_id: Bphy_2860
symbol: Bphy_2860
gene_biotype: protein_coding
description:
  TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; KEGG: bxe:Bxe_A0292 phenylacetic acid degradation protein PaaD.


ensembl_gene_id: Bphy_2861
symbol: Bphy_2861
gene_biotype: protein_coding
description:
  TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bxe:Bxe_A0291 phenylacetic acid degradation NADH oxidoreductase PaaE.


ensembl_gene_id: Bphy_2865
symbol: Bphy_2865
gene_biotype: protein_coding
description:
  PFAM: regulatory protein AsnC/Lrp family; KEGG: bam:Bamb_0241 transcriptional regulator, AsnC family.


ensembl_gene_id: Bphy_2866
symbol: Bphy_2866
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_A0286 4-hydroxyphenylpyruvate dioxygenase (Hpd); TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase.


ensembl_gene_id: Bphy_2869
symbol: Bphy_2869
gene_biotype: protein_coding
description:
  PFAM: phosphate acetyl/butaryl transferase; malic protein domain protein; malic protein NAD-binding; KEGG: bxe:Bxe_A0283 malate dehydrogenase (oxaloacetatedecarboxylating) (NADP+), phosphate acetyltransferase; Belongs to the malic enzymes family.


ensembl_gene_id: Bphy_2870
symbol: Bphy_2870
gene_biotype: protein_coding
description:
  PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A0282 major facilitator superfamily (MFS) transporter.


ensembl_gene_id: Bphy_2871
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: Bphy_2872
symbol: Bphy_2872
gene_biotype: protein_coding
description:
  PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bxe:Bxe_A0280 two component transcriptional regulator, LuxR family.


ensembl_gene_id: Bphy_2875
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: Bphy_2877
symbol: Bphy_2877
gene_biotype: protein_coding
description:
  PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bxe:Bxe_A0271 oxidoreductase.


ensembl_gene_id: Bphy_2883
symbol: Bphy_2883
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B0434 major facilitator superfamily (MFS) transporter.


ensembl_gene_id: Bphy_2884
symbol: Bphy_2884
gene_biotype: protein_coding
description:
  TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: atc:AGR_L_2138 hypothetical protein.


ensembl_gene_id: Bphy_2889
symbol: Bphy_2889
gene_biotype: protein_coding
description:
  Methyltransferase type 11; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: reu:Reut_B3495 UbiE/COQ5 methyltransferase.


ensembl_gene_id: Bphy_2890
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: Bphy_2891
symbol: glmU
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. In the C-terminal section; belongs to the transferase hexapeptide repeat family.


ensembl_gene_id: Bphy_2892
symbol: ttcA
gene_biotype: protein_coding
description:
  PP-loop domain protein; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.


ensembl_gene_id: Bphy_2897
symbol: cca
gene_biotype: protein_coding
description:
  Polynucleotide adenylyltransferase/metal dependent phosphohydrolase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases.


ensembl_gene_id: Bphy_2899
symbol: Bphy_2899
gene_biotype: protein_coding
description:
  NADH dehydrogenase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: bxe:Bxe_A0199 hypothetical protein.


ensembl_gene_id: Bphy_2901
symbol: Bphy_2901
gene_biotype: protein_coding
description:
  PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: bxe:Bxe_A0197 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.


ensembl_gene_id: Bphy_2904
symbol: Bphy_2904
gene_biotype: protein_coding
description:
  TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: bxe:Bxe_A0194 UreA amidolyase-related protein.


ensembl_gene_id: Bphy_2905
symbol: pxpA
gene_biotype: protein_coding
description:
  LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.


ensembl_gene_id: Bphy_2908
symbol: Bphy_2908
gene_biotype: protein_coding
description:
  PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bxe:Bxe_A0190 TPR repeat protein.


ensembl_gene_id: Bphy_2910
symbol: Bphy_2910
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_A0186 ABC dipeptide/oligopeptide/nickel transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.


ensembl_gene_id: Bphy_2911
symbol: Bphy_2911
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_A0185 ABC dipeptide/oligopeptide/nickel transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.


ensembl_gene_id: Bphy_2912
symbol: Bphy_2912
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_A0184 ABC dipeptide/oligopeptide/nickel family transporter, inner membrane subunit.


ensembl_gene_id: Bphy_2913
symbol: Bphy_2913
gene_biotype: protein_coding
description:
  Nickel-transporting ATPase; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_A0183 ABC dipeptide/oligopeptide/nickel family transporter, inner membrane subunit.


ensembl_gene_id: Bphy_2914
symbol: Bphy_2914
gene_biotype: protein_coding
description:
  PFAM: extracellular solute-binding protein family 5; KEGG: bxe:Bxe_A0182 ABC dipeptide transporter, periplasmic ligand binding protein.


ensembl_gene_id: Bphy_2915
symbol: Bphy_2915
gene_biotype: protein_coding
description:
  PFAM: extracellular solute-binding protein family 5; KEGG: bxe:Bxe_A0181 ABC dipeptide transporter, periplasmic ligand binding protein.


ensembl_gene_id: Bphy_2916
symbol: Bphy_2916
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_A0180 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: Bphy_2918
symbol: ahcY
gene_biotype: protein_coding
description:
  Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: Bphy_2922
symbol: Bphy_2922
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A0176 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_2924
symbol: Bphy_2924
gene_biotype: protein_coding
description:
  PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_A0173 acyl-CoA dehydrogenase.


ensembl_gene_id: Bphy_2930
symbol: fliE
gene_biotype: protein_coding
description:
  TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: bxe:Bxe_A0167 flagellar hook-basal body complex protein FliE.


ensembl_gene_id: Bphy_2931
symbol: Bphy_2931
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: Bphy_2934
symbol: Bphy_2934
gene_biotype: protein_coding
description:
  ATPase, FliI/YscN family; KEGG: bxe:Bxe_A0163 ATPase FliI/YscN; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase.


ensembl_gene_id: Bphy_2935
symbol: Bphy_2935
gene_biotype: protein_coding
description:
  TIGRFAM: flagellar export protein FliJ; PFAM: flagellar FliJ protein; KEGG: bxe:Bxe_A0162 flagellar FliJ protein.


ensembl_gene_id: Bphy_2936
symbol: Bphy_2936
gene_biotype: protein_coding
description:
  PFAM: flagellar hook-length control protein; KEGG: bxe:Bxe_A0161 putative flagellar hook-length control protein.


ensembl_gene_id: Bphy_2937
symbol: Bphy_2937
gene_biotype: protein_coding
description:
  Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: Bphy_2938
symbol: Bphy_2938
gene_biotype: protein_coding
description:
  PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: bxe:Bxe_A0158 flagellar motor switch protein FliM.


ensembl_gene_id: Bphy_2939
symbol: Bphy_2939
gene_biotype: protein_coding
description:
  TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: bxe:Bxe_A0157 flagellar motor switch protein FliN.


ensembl_gene_id: Bphy_2941
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: Bphy_2942
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: Bphy_2943
symbol: Bphy_2943
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: Bphy_2947
symbol: Bphy_2947
gene_biotype: protein_coding
description:
  TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein; KEGG: bxe:Bxe_A0139 putative flagella basal body P-ring formation protein.


ensembl_gene_id: Bphy_2948
symbol: Bphy_2948
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: Bphy_2949
symbol: Bphy_2949
gene_biotype: protein_coding
description:
  TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: bxe:Bxe_A0141 flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: Bphy_2950
symbol: Bphy_2950
gene_biotype: protein_coding
description:
  Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.


ensembl_gene_id: Bphy_2951
symbol: Bphy_2951
gene_biotype: protein_coding
description:
  PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: bxe:Bxe_A0143 putative flagellar hook protein FlgE.


ensembl_gene_id: Bphy_2952
symbol: Bphy_2952
gene_biotype: protein_coding
description:
  TIGRFAM: flagellar basal-body rod protein FlgF; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: bxe:Bxe_A0144 FlgF; flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: Bphy_2953
symbol: Bphy_2953
gene_biotype: protein_coding
description:
  TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: bxe:Bxe_A0145 FlgG; flagellar basal-body rod protein.


ensembl_gene_id: Bphy_2955
symbol: flgI
gene_biotype: protein_coding
description:
  Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: Bphy_2956
symbol: Bphy_2956
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_A0148 flagellar protein FlgJ; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2.


ensembl_gene_id: Bphy_2957
symbol: ycgR
gene_biotype: protein_coding
description:
  YcgR family protein; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)-dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility.


ensembl_gene_id: Bphy_2958
symbol: Bphy_2958
gene_biotype: protein_coding
description:
  TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; KEGG: bxe:Bxe_A0150 flagellar hook-associated protein.


ensembl_gene_id: Bphy_2959
symbol: Bphy_2959
gene_biotype: protein_coding
description:
  TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: bxe:Bxe_A0151 flagellar hook-associated protein.


ensembl_gene_id: Bphy_2960
symbol: fliA
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 28 subunit, FliA/WhiG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.


ensembl_gene_id: Bphy_2962
symbol: Bphy_2962
gene_biotype: protein_coding
description:
  PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: AAA ATPase; KEGG: bxe:Bxe_A0132 flagellar biosynthesis protein, FlhF.


ensembl_gene_id: Bphy_2963
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: Bphy_2964
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: Bphy_2967
symbol: Bphy_2967
gene_biotype: protein_coding
description:
  Chemotaxis phosphatase, CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).


ensembl_gene_id: Bphy_2968
symbol: Bphy_2968
gene_biotype: protein_coding
description:
  PFAM: response regulator receiver; KEGG: bxe:Bxe_A0125 response regulator receiver domain protein(CheY).


ensembl_gene_id: Bphy_2969
symbol: cheB
gene_biotype: protein_coding
description:
  Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: Bphy_2970
symbol: cheD
gene_biotype: protein_coding
description:
  CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: Bphy_2971
symbol: Bphy_2971
gene_biotype: protein_coding
description:
  MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.


ensembl_gene_id: Bphy_2972
symbol: Bphy_2972
gene_biotype: protein_coding
description:
  PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bxe:Bxe_A0121 methyl-accepting chemotaxis sensory transducer.


ensembl_gene_id: Bphy_2974
symbol: Bphy_2974
gene_biotype: protein_coding
description:
  CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; CheY binding; KEGG: bxe:Bxe_A0119 CheA signal transduction histidine kinases(STHK).


ensembl_gene_id: Bphy_2975
symbol: Bphy_2975
gene_biotype: protein_coding
description:
  PFAM: response regulator receiver; KEGG: bxe:Bxe_A0118 response regulator receiver domain protein(CheY).


ensembl_gene_id: Bphy_2978
symbol: flhC
gene_biotype: protein_coding
description:
  Flagellar transcriptional activator FlhC; Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhC family.


ensembl_gene_id: Bphy_2979
symbol: flhD
gene_biotype: protein_coding
description:
  Flagellar transcriptional activator; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhD family.


ensembl_gene_id: Bphy_2981
symbol: Bphy_2981
gene_biotype: protein_coding
description:
  PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bxe:Bxe_A0112 HNS-like transcriptional regulator.


ensembl_gene_id: Bphy_2982
symbol: aqpZ
gene_biotype: protein_coding
description:
  MIP family channel protein; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family.


ensembl_gene_id: Bphy_2983
symbol: Bphy_2983
gene_biotype: protein_coding
description:
  TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase type 3; KEGG: bxe:Bxe_A0108 HAD-superfamily hydrolase, Cof subfamily.


ensembl_gene_id: Bphy_2987
symbol: rpsU
gene_biotype: protein_coding
description:
  PFAM: ribosomal protein S21; KEGG: bxe:Bxe_A0105 ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.


ensembl_gene_id: Bphy_2989
symbol: Bphy_2989
gene_biotype: protein_coding
description:
  Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: Bphy_2990
symbol: Bphy_2990
gene_biotype: protein_coding
description:
  Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: Bphy_2992
symbol: Bphy_2992
gene_biotype: protein_coding
description:
  PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bam:Bamb_0151 TPR repeat-containing protein.


ensembl_gene_id: Bphy_2993
symbol: Bphy_2993
gene_biotype: protein_coding
description:
  PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bur:Bcep18194_A3340 TPR repeat protein.


ensembl_gene_id: Bphy_2995
symbol: Bphy_2995
gene_biotype: protein_coding
description:
  PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bam:Bamb_0149 NAD-dependent epimerase/dehydratase.


ensembl_gene_id: Bphy_2996
symbol: Bphy_2996
gene_biotype: protein_coding
description:
  PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bur:Bcep18194_A3338 TPR repeat protein.


ensembl_gene_id: Bphy_2997
symbol: Bphy_2997
gene_biotype: protein_coding
description:
  PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bur:Bcep18194_A3339 TPR repeat protein.


ensembl_gene_id: Bphy_3000
symbol: rep
gene_biotype: protein_coding
description:
  UvrD/REP helicase; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction.


ensembl_gene_id: Bphy_3001
symbol: Bphy_3001
gene_biotype: protein_coding
description:
  PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bxe:Bxe_A0059 putative oxidoreductase.


ensembl_gene_id: Bphy_3003
symbol: gcvT
gene_biotype: protein_coding
description:
  Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine.


ensembl_gene_id: Bphy_3004
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: Bphy_3005
symbol: gcvP
gene_biotype: protein_coding
description:
  Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.


ensembl_gene_id: Bphy_3006
symbol: Bphy_3006
gene_biotype: protein_coding
description:
  PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bce:BC1209 O-antigen biosynthesis protein RfbC.


ensembl_gene_id: Bphy_3007
symbol: Bphy_3007
gene_biotype: protein_coding
description:
  PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rca:Rcas_1535 methyltransferase type 11.


ensembl_gene_id: Bphy_3009
symbol: Bphy_3009
gene_biotype: protein_coding
description:
  PFAM: acylneuraminate cytidylyltransferase; KEGG: pfo:Pfl_1521 acylneuraminate cytidylyltransferase.


ensembl_gene_id: Bphy_3010
symbol: Bphy_3010
gene_biotype: protein_coding
description:
  PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: pfo:Pfl_1519 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: Bphy_3011
symbol: Bphy_3011
gene_biotype: protein_coding
description:
  Polysaccharide biosynthesis protein CapD; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: pde:Pden_3558 polysaccharide biosynthesis protein CapD.


ensembl_gene_id: Bphy_3015
symbol: Bphy_3015
gene_biotype: protein_coding
description:
  KEGG: bte:BTH_I3251 L-serine ammonia-lyase; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; Belongs to the iron-sulfur dependent L-serine dehydratase family.


ensembl_gene_id: Bphy_3016
symbol: Bphy_3016
gene_biotype: protein_coding
description:
  PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bxe:Bxe_A0051 acetolactate synthase, large subunit, putative; Belongs to the TPP enzyme family.


ensembl_gene_id: Bphy_3017
symbol: Bphy_3017
gene_biotype: protein_coding
description:
  PFAM: Extracellular ligand-binding receptor; KEGG: bxe:Bxe_A0050 ABC branched chain amino acid family transporter, periplasmic ligand binding protein.


ensembl_gene_id: Bphy_3018
symbol: Bphy_3018
gene_biotype: protein_coding
description:
  Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: Bphy_3022
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: Bphy_3023
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: Bphy_3024
symbol: Bphy_3024
gene_biotype: protein_coding
description:
  Arogenate dehydratase; PFAM: extracellular solute-binding protein family 3; KEGG: bxe:Bxe_A0043 prephenate dehydratase.


ensembl_gene_id: Bphy_3025
symbol: Bphy_3025
gene_biotype: protein_coding
description:
  PFAM: AMP-dependent synthetase and ligase; KEGG: bxe:Bxe_A0042 putative long-chain-fatty-acid--CoA ligase.


ensembl_gene_id: Bphy_3026
symbol: atpC-2
gene_biotype: protein_coding
description:
  ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: Bphy_3028
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: Bphy_3030
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family.


ensembl_gene_id: Bphy_3031
symbol: atpF-2
gene_biotype: protein_coding
description:
  ATP synthase F0, B subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: Bphy_3036
symbol: Bphy_3036
gene_biotype: protein_coding
description:
  TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: bxe:Bxe_A0031 ParB-like partition protein; Belongs to the ParB family.


ensembl_gene_id: Bphy_3038
symbol: rsmG
gene_biotype: protein_coding
description:
  Methyltransferase GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.


ensembl_gene_id: Bphy_3039
symbol: mnmG
gene_biotype: protein_coding
description:
  Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: Bphy_3040
symbol: Bphy_3040
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A0027 ABC branched chain amino acid family transporter, ATPase subunit.


ensembl_gene_id: Bphy_3041
symbol: Bphy_3041
gene_biotype: protein_coding
description:
  ABC transporter related; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A0026 ABC branched chain amino acid family transporter, fused ATPase and inner membrane subunits; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Bphy_3042
symbol: Bphy_3042
gene_biotype: protein_coding
description:
  PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A0025 ABC branched chain amino acid family transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Bphy_3043
symbol: Bphy_3043
gene_biotype: protein_coding
description:
  PFAM: Extracellular ligand-binding receptor; KEGG: bxe:Bxe_A0024 ABC branched chain amino acid family transporter, periplasmic ligand binding protein.


ensembl_gene_id: Bphy_3045
symbol: Bphy_3045
gene_biotype: protein_coding
description:
  PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A0021 ABC branched chain amino acid family transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Bphy_3046
symbol: Bphy_3046
gene_biotype: protein_coding
description:
  PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A0020 ABC branched chain amino acid family transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Bphy_3047
symbol: Bphy_3047
gene_biotype: protein_coding
description:
  PFAM: Extracellular ligand-binding receptor; KEGG: bxe:Bxe_A0019 ABC branched-chain amino acid family transporter, periplasmic ligand binding protein.


ensembl_gene_id: Bphy_3048
symbol: Bphy_3048
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A0018 ABC branched chain amino acid family transporter, ATPase subunit.


ensembl_gene_id: Bphy_3049
symbol: Bphy_3049
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A0017 ABC branched chain amino acid family transporter, ATPase subunit.


ensembl_gene_id: Bphy_3050
symbol: Bphy_3050
gene_biotype: protein_coding
description:
  PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: bxe:Bxe_A0016 oxidoreductase, GMC family.


ensembl_gene_id: Bphy_3052
symbol: Bphy_3052
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A0014 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_3054
symbol: Bphy_3054
gene_biotype: protein_coding
description:
  PFAM: regulatory protein AsnC/Lrp family; KEGG: bpd:BURPS668_4000 transcriptional regulator, AsnC family.


ensembl_gene_id: Bphy_3055
symbol: Bphy_3055
gene_biotype: protein_coding
description:
  PFAM: transcriptional coactivator/pterin dehydratase; KEGG: bxe:Bxe_A0010 pterin-4A-carbinolamina dehydratase (PhhB).


ensembl_gene_id: Bphy_3057
symbol: Bphy_3057
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bxe:Bxe_A0008 two component transcriptional regulator, winged helix family.


ensembl_gene_id: Bphy_3058
symbol: Bphy_3058
gene_biotype: protein_coding
description:
  Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: bxe:Bxe_A0007 periplasmic sensor signal transduction histidine kinase.


ensembl_gene_id: Bphy_3060
symbol: Bphy_3060
gene_biotype: protein_coding
description:
  PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bxe:Bxe_A0005 putative NADH-dependent flavin oxidoreductase.


ensembl_gene_id: Bphy_3061
symbol: Bphy_3061
gene_biotype: protein_coding
description:
  PFAM: 3-alpha domain protein; MOSC domain containing protein; KEGG: rsh:Rsph17029_0572 MOSC domain containing protein.


ensembl_gene_id: Bphy_3062
symbol: Bphy_3062
gene_biotype: protein_coding
description:
  PFAM: glutamine amidotransferase class-I; KEGG: bxe:Bxe_A0004 putative glutamine amidotransferase class-I.


ensembl_gene_id: Bphy_3063
symbol: Bphy_3063
gene_biotype: protein_coding
description:
  Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; regulatory protein ArsR; KEGG: bxe:Bxe_A0003 transcriptional regulator, MarR family.


ensembl_gene_id: Bphy_3064
symbol: Bphy_3064
gene_biotype: protein_coding
description:
  Glutamate--cysteine ligase GCS2; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.


ensembl_gene_id: Bphy_3066
symbol: mnmC
gene_biotype: protein_coding
description:
  tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the N-terminal section; belongs to the methyltransferase superfamily. tRNA (mnm(5)s(2)U34)-methyltransferase family.


ensembl_gene_id: Bphy_3068
symbol: Bphy_3068
gene_biotype: protein_coding
description:
  PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bxe:Bxe_A4503 putative cobalamin synthesis protein/P47K.


ensembl_gene_id: Bphy_3070
symbol: Bphy_3070
gene_biotype: protein_coding
description:
  TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: bxe:Bxe_A4501 putative general secretory pathway protein D.


ensembl_gene_id: Bphy_3071
symbol: Bphy_3071
gene_biotype: protein_coding
description:
  General secretory pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.


ensembl_gene_id: Bphy_3072
symbol: Bphy_3072
gene_biotype: protein_coding
description:
  TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: bxe:Bxe_A4499 putative general secretory pathway protein F.


ensembl_gene_id: Bphy_3074
symbol: Bphy_3074
gene_biotype: protein_coding
description:
  TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: bxe:Bxe_A4497 general secretion pathway protein G.


ensembl_gene_id: Bphy_3075
symbol: Bphy_3075
gene_biotype: protein_coding
description:
  TIGRFAM: general secretion pathway protein H; KEGG: bxe:Bxe_A4496 general secretion pathway protein H.


ensembl_gene_id: Bphy_3076
symbol: Bphy_3076
gene_biotype: protein_coding
description:
  TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: bxe:Bxe_A4495 general secretion pathway protein I.


ensembl_gene_id: Bphy_3078
symbol: Bphy_3078
gene_biotype: protein_coding
description:
  PFAM: General secretion pathway protein K; KEGG: bxe:Bxe_A4493 putative general secretory pathway protein K.


ensembl_gene_id: Bphy_3079
symbol: Bphy_3079
gene_biotype: protein_coding
description:
  TIGRFAM: general secretion pathway protein L; PFAM: General secretion pathway L; KEGG: bxe:Bxe_A4492 putative general secretory pathway protein L.


ensembl_gene_id: Bphy_3080
symbol: Bphy_3080
gene_biotype: protein_coding
description:
  PFAM: General secretion pathway M protein; KEGG: bxe:Bxe_A4491 putative general secretory pathway protein M.


ensembl_gene_id: Bphy_3081
symbol: Bphy_3081
gene_biotype: protein_coding
description:
  PFAM: type II secretion system protein N; KEGG: bxe:Bxe_A4490 putative general secretory pathway protein N.


ensembl_gene_id: Bphy_3082
symbol: Bphy_3082
gene_biotype: protein_coding
description:
  TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_A4489 RND efflux system, outer membrane lipoprotein, NodT family.


ensembl_gene_id: Bphy_3086
symbol: gshA
gene_biotype: protein_coding
description:
  TIGRFAM: glutamate--cysteine ligase; KEGG: bxe:Bxe_A4484 glutamate--cysteine ligase, monofunctional; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.


ensembl_gene_id: Bphy_3087
symbol: Bphy_3087
gene_biotype: protein_coding
description:
  PFAM: HhH-GPD family protein; AlkA domain protein; KEGG: bte:BTH_I0086 DNA-3-methyladenine glycosylase II.


ensembl_gene_id: Bphy_3088
symbol: Bphy_3088
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. Belongs to the MGMT family.


ensembl_gene_id: Bphy_3089
symbol: Bphy_3089
gene_biotype: protein_coding
description:
  PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bpd:BURPS668_0115 glyoxalase family protein.


ensembl_gene_id: Bphy_3095
symbol: Bphy_3095
gene_biotype: protein_coding
description:
  PFAM: integrase family protein; KEGG: bxe:Bxe_A4470 putative phage integrase; Belongs to the 'phage' integrase family.


ensembl_gene_id: Bphy_3096
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: Bphy_3098
symbol: yidC
gene_biotype: protein_coding
description:
  60 kDa inner membrane insertion protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: Bphy_3099
symbol: Bphy_3099
gene_biotype: protein_coding
description:
  Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: Bphy_3100
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: Bphy_3101
symbol: rpmH
gene_biotype: protein_coding
description:
  PFAM: ribosomal protein L34; KEGG: bte:BTH_I3238 ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.


ensembl_gene_id: Bphy_3104
symbol: Bphy_3104
gene_biotype: protein_coding
description:
  Putative PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: dar:Daro_1083 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.


ensembl_gene_id: Bphy_3107
symbol: Bphy_3107
gene_biotype: protein_coding
description:
  TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: bch:Bcen2424_6619 putative regulatory protein, FmdB family.


ensembl_gene_id: Bphy_3108
symbol: Bphy_3108
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B0952 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_3109
symbol: Bphy_3109
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B0951 major facilitator superfamily (MFS) transporter.


ensembl_gene_id: Bphy_3110
symbol: Bphy_3110
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: dar:Daro_2298 response regulator receiver:transcriptional regulatory protein, C-terminal.


ensembl_gene_id: Bphy_3111
symbol: Bphy_3111
gene_biotype: protein_coding
description:
  Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: nha:Nham_0997 periplasmic sensor signal transduction histidine kinase.


ensembl_gene_id: Bphy_3117
symbol: Bphy_3117
gene_biotype: protein_coding
description:
  PFAM: heat shock protein DnaJ domain protein; KEGG: rme:Rmet_1823 heat shock protein DnaJ-like protein.


ensembl_gene_id: Bphy_3121
symbol: Bphy_3121
gene_biotype: protein_coding
description:
  PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bur:Bcep18194_B1880 transcriptional regulator, GntR family with aminotransferase activity.


ensembl_gene_id: Bphy_3123
symbol: dinB
gene_biotype: protein_coding
description:
  DNA-directed DNA polymerase; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: Bphy_3127
symbol: Bphy_3127
gene_biotype: protein_coding
description:
  PFAM: glycoside hydrolase family 31; KEGG: rso:RSc1081 probable glucosidase protein; Belongs to the glycosyl hydrolase 31 family.


ensembl_gene_id: Bphy_3128
symbol: Bphy_3128
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc1080 putative hexuronate transporter transmembrane protein.


ensembl_gene_id: Bphy_3132
symbol: Bphy_3132
gene_biotype: protein_coding
description:
  PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bxe:Bxe_B2075 amino acid efflux pump, RhtB family, LysE superfamily.


ensembl_gene_id: Bphy_3134
symbol: Bphy_3134
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_A1494 putative diguanylate cyclase/phosphodiesterase(GGDEF & EAL domains) with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.


ensembl_gene_id: Bphy_3136
symbol: Bphy_3136
gene_biotype: protein_coding
description:
  PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: bte:BTH_II1391 putative multiple antibiotic resistance protein.


ensembl_gene_id: Bphy_3138
symbol: Bphy_3138
gene_biotype: protein_coding
description:
  PFAM: Na+/solute symporter; KEGG: bxe:Bxe_B1295 Na+/monocarboxylate symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: Bphy_3139
symbol: Bphy_3139
gene_biotype: protein_coding
description:
  KEGG: bch:Bcen2424_1678 precorrin-4 C11-methyltransferase; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase.


ensembl_gene_id: Bphy_3140
symbol: Bphy_3140
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_B1248 precorrin-6X reductase; TIGRFAM: precorrin-6x reductase; PFAM: Precorrin-6x reductase CbiJ/CobK.


ensembl_gene_id: Bphy_3141
symbol: cbiD
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CbiD; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.


ensembl_gene_id: Bphy_3142
symbol: Bphy_3142
gene_biotype: protein_coding
description:
  Precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; KEGG: bxe:Bxe_B1246 precorrin-6Y C5,15-methyltransferase(decarboxylating); TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase.


ensembl_gene_id: Bphy_3143
symbol: Bphy_3143
gene_biotype: protein_coding
description:
  TIGRFAM: precorrin-3B synthase; PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: bxe:Bxe_B1245 putative oxidoreductase.


ensembl_gene_id: Bphy_3145
symbol: Bphy_3145
gene_biotype: protein_coding
description:
  Precorrin-2 C20-methyltransferase; Methylates precorrin-2 at the C-20 position to produce precorrin-3A.


ensembl_gene_id: Bphy_3146
symbol: Bphy_3146
gene_biotype: protein_coding
description:
  TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: bur:Bcep18194_A4821 precorrin-3B C17-methyltransferase region.


ensembl_gene_id: Bphy_3151
symbol: Bphy_3151
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_B1645 putative magnesium chelatase, ChlI subunit; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase.


ensembl_gene_id: Bphy_3152
symbol: Bphy_3152
gene_biotype: protein_coding
description:
  Cobaltochelatase, CobN subunit; KEGG: bxe:Bxe_B1646 putative cobalamin biosynthesis-related protein; TIGRFAM: cobaltochelatase, CobN subunit; PFAM: CobN/magnesium chelatase.


ensembl_gene_id: Bphy_3153
symbol: Bphy_3153
gene_biotype: protein_coding
description:
  TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bxe:Bxe_B1647 CobW.


ensembl_gene_id: Bphy_3154
symbol: Bphy_3154
gene_biotype: protein_coding
description:
  TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bxe:Bxe_B1649 uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family.


ensembl_gene_id: Bphy_3155
symbol: Bphy_3155
gene_biotype: protein_coding
description:
  PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: cvi:CV_1563 precorrin methylase protein.


ensembl_gene_id: Bphy_3156
symbol: Bphy_3156
gene_biotype: protein_coding
description:
  cob(I)alamin adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.


ensembl_gene_id: Bphy_3157
symbol: Bphy_3157
gene_biotype: protein_coding
description:
  PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: bxe:Bxe_B1656 CobB.


ensembl_gene_id: Bphy_3158
symbol: Bphy_3158
gene_biotype: protein_coding
description:
  TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; KEGG: bxe:Bxe_B1657 putative oxidoreductase.


ensembl_gene_id: Bphy_3159
symbol: Bphy_3159
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bxe:Bxe_B1661 two component transcriptional regulator, winged helix family.


ensembl_gene_id: Bphy_3160
symbol: Bphy_3160
gene_biotype: protein_coding
description:
  Transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: bxe:Bxe_B1665 transcriptional regulator, DeoR family.


ensembl_gene_id: Bphy_3161
symbol: Bphy_3161
gene_biotype: protein_coding
description:
  PFAM: FAD dependent oxidoreductase; glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: bxe:Bxe_B1666 dehydrogenase; Belongs to the GcvT family.


ensembl_gene_id: Bphy_3162
symbol: Bphy_3162
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_B1673 putative transcriptional regulator, AraC family.


ensembl_gene_id: Bphy_3165
symbol: Bphy_3165
gene_biotype: protein_coding
description:
  PFAM: transposase IS3/IS911 family protein; KEGG: hha:Hhal_0617 transposase IS3/IS911 family protein.


ensembl_gene_id: Bphy_3168
symbol: Bphy_3168
gene_biotype: protein_coding
description:
  TIGRFAM: transcriptional regulator, ArgP family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A2670 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_3172
symbol: Bphy_3172
gene_biotype: protein_coding
description:
  TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ypk:y0204 dehydrogenase.


ensembl_gene_id: Bphy_3174
symbol: Bphy_3174
gene_biotype: protein_coding
description:
  L-lactate dehydrogenase (cytochrome); PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: pde:Pden_5045 (S)-2-hydroxy-acid oxidase.


ensembl_gene_id: Bphy_3176
symbol: Bphy_3176
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mmw:Mmwyl1_3825 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_3179
symbol: Bphy_3179
gene_biotype: protein_coding
description:
  PFAM: Enoyl-CoA hydratase/isomerase; KEGG: xau:Xaut_3350 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Bphy_3180
symbol: Bphy_3180
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbt:BBta_7628 ABC transporter ATP-binding protein.


ensembl_gene_id: Bphy_3181
symbol: Bphy_3181
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_3099 binding-protein-dependent transport systems inner membrane component.


ensembl_gene_id: Bphy_3184
symbol: Bphy_3184
gene_biotype: protein_coding
description:
  PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pol:Bpro_0422 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding.


ensembl_gene_id: Bphy_3187
symbol: Bphy_3187
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_6218 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_3189
symbol: Bphy_3189
gene_biotype: protein_coding
description:
  PFAM: flavin reductase domain protein FMN-binding; KEGG: psp:PSPPH_2161 flavin reductase domain protein.


ensembl_gene_id: Bphy_3191
symbol: Bphy_3191
gene_biotype: protein_coding
description:
  PFAM: Na+/solute symporter; KEGG: bur:Bcep18194_B2476 Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: Bphy_3195
symbol: Bphy_3195
gene_biotype: protein_coding
description:
  PFAM: chemotaxis sensory transducer; KEGG: rso:RS02364 putative methyl-accepting chemotaxis transducer transmembrane protein.


ensembl_gene_id: Bphy_3197
symbol: Bphy_3197
gene_biotype: protein_coding
description:
  PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: swi:Swit_4277 glucose-methanol-choline oxidoreductase.


ensembl_gene_id: Bphy_3198
symbol: Bphy_3198
gene_biotype: protein_coding
description:
  PFAM: Aldehyde Dehydrogenase; KEGG: xcv:XCV0917 putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: Bphy_3199
symbol: Bphy_3199
gene_biotype: protein_coding
description:
  PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: bur:Bcep18194_B3106 membrane protein.


ensembl_gene_id: Bphy_3200
symbol: Bphy_3200
gene_biotype: protein_coding
description:
  PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mms:mma_1673 oxidoreductase/oxygenase, VanB family.


ensembl_gene_id: Bphy_3201
symbol: Bphy_3201
gene_biotype: protein_coding
description:
  Phthalate 4,5-dioxygenase; PFAM: Rieske [2Fe-2S] domain protein; KEGG: rpa:RPA0983 possible phthalate dioxygenase.


ensembl_gene_id: Bphy_3202
symbol: Bphy_3202
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_4318 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_3203
symbol: Bphy_3203
gene_biotype: protein_coding
description:
  PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: dac:Daci_4444 oxidoreductase domain protein.


ensembl_gene_id: Bphy_3204
symbol: Bphy_3204
gene_biotype: protein_coding
description:
  Protocatechuate 4,5-dioxygenase; PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: pat:Patl_3885 protocatechuate 4,5-dioxygenase.


ensembl_gene_id: Bphy_3205
symbol: Bphy_3205
gene_biotype: protein_coding
description:
  TIGRFAM: protocatechuate 4,5-dioxygenase, alpha subunit; PFAM: Extradiol ring-cleavage dioxygenase LigAB LigA subunit; KEGG: dac:Daci_3814 protocatechuate 4,5-dioxygenase, alpha subunit.


ensembl_gene_id: Bphy_3207
symbol: Bphy_3207
gene_biotype: protein_coding
description:
  TIGRFAM: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase; PFAM: Dimethylmenaquinone methyltransferase; KEGG: mag:amb0252 4-hydroxy-4-methyl-2-oxoglutarate aldolase.


ensembl_gene_id: Bphy_3210
symbol: Bphy_3210
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pna:Pnap_2034 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_3215
symbol: Bphy_3215
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: rso:RS00896 probable transport transmembrane protein.


ensembl_gene_id: Bphy_3216
symbol: Bphy_3216
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rso:RS00895 probable transcription regulator protein.


ensembl_gene_id: Bphy_3220
symbol: Bphy_3220
gene_biotype: protein_coding
description:
  PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dac:Daci_0040 glyoxalase/bleomycin resistance protein/dioxygenase.


ensembl_gene_id: Bphy_3221
symbol: Bphy_3221
gene_biotype: protein_coding
description:
  PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: sen:SACE_2819 phthalate 4,5-dioxygenase reductase subunit.


ensembl_gene_id: Bphy_3225
symbol: Bphy_3225
gene_biotype: protein_coding
description:
  TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: bxe:Bxe_B0833 succinic semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: Bphy_3227
symbol: Bphy_3227
gene_biotype: protein_coding
description:
  PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: bxe:Bxe_B2237 methyl-accepting chemotaxis sensory transducer.


ensembl_gene_id: Bphy_3228
symbol: Bphy_3228
gene_biotype: protein_coding
description:
  KEGG: sit:TM1040_3117 putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)-like.


ensembl_gene_id: Bphy_3232
symbol: Bphy_3232
gene_biotype: protein_coding
description:
  PFAM: integrase family protein; KEGG: dar:Daro_2336 phage integrase; Belongs to the 'phage' integrase family.


ensembl_gene_id: Bphy_3238
symbol: Bphy_3238
gene_biotype: protein_coding
description:
  Phage transcriptional regulator, AlpA; PFAM: regulatory protein MerR; Prophage CP4-57 regulatory; KEGG: azo:azo2049 hypothetical protein.


ensembl_gene_id: Bphy_3239
symbol: Bphy_3239
gene_biotype: protein_coding
description:
  PFAM: integrase family protein; KEGG: bur:Bcep18194_B1028 phage integrase; Belongs to the 'phage' integrase family.


ensembl_gene_id: Bphy_3240
symbol: ribA
gene_biotype: protein_coding
description:
  GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: Bphy_3241
symbol: Bphy_3241
gene_biotype: protein_coding
description:
  PFAM: CBS domain containing protein; KEGG: bxe:Bxe_B1676 signal-transduction protein containing CBS domains.


ensembl_gene_id: Bphy_3243
symbol: Bphy_3243
gene_biotype: protein_coding
description:
  TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG); KEGG: bxe:Bxe_B1678 methylpurine-DNA glycosylase (MPG); Belongs to the DNA glycosylase MPG family.


ensembl_gene_id: Bphy_3244
symbol: Bphy_3244
gene_biotype: protein_coding
description:
  PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: bxe:Bxe_B1679 transport-associated.


ensembl_gene_id: Bphy_3245
symbol: Bphy_3245
gene_biotype: protein_coding
description:
  PFAM: sodium/calcium exchanger membrane region; KEGG: bxe:Bxe_B1680 Ca2+/H+ antiporter, CaCA family.


ensembl_gene_id: Bphy_3246
symbol: Bphy_3246
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B1681 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_3247
symbol: Bphy_3247
gene_biotype: protein_coding
description:
  PFAM: extracellular solute-binding protein family 3; KEGG: bxe:Bxe_B1686 ABC amino acid transporter, periplasmic ligand binding protein; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: Bphy_3248
symbol: Bphy_3248
gene_biotype: protein_coding
description:
  TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1687 ABC polar amino acid family transporter, inner membrane subunit.


ensembl_gene_id: Bphy_3249
symbol: Bphy_3249
gene_biotype: protein_coding
description:
  TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1688 ABC polar amino acid family transporter, inner membrane subunit.


ensembl_gene_id: Bphy_3250
symbol: Bphy_3250
gene_biotype: protein_coding
description:
  Gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I; KEGG: bxe:Bxe_B1689 cytochrome c, class I.


ensembl_gene_id: Bphy_3251
symbol: Bphy_3251
gene_biotype: protein_coding
description:
  PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bxe:Bxe_B1690 isoquinoline 1-oxidoreductase, beta subunit.


ensembl_gene_id: Bphy_3252
symbol: Bphy_3252
gene_biotype: protein_coding
description:
  PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bxe:Bxe_B1691 putative oxidoreductase alpha subunit.


ensembl_gene_id: Bphy_3253
symbol: Bphy_3253
gene_biotype: protein_coding
description:
  PFAM: TPR repeat-containing protein; cellulose synthase operon C domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bxe:Bxe_B2043 putative cellulose synthase operon protein C.


ensembl_gene_id: Bphy_3255
symbol: Bphy_3255
gene_biotype: protein_coding
description:
  Cellulose synthase subunit B; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.


ensembl_gene_id: Bphy_3256
symbol: Bphy_3256
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_B2040 cellulose synthase (UDP-forming); TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: glycosyl transferase family 2; type IV pilus assembly PilZ.


ensembl_gene_id: Bphy_3257
symbol: Bphy_3257
gene_biotype: protein_coding
description:
  TIGRFAM: cellulose synthase operon protein YhjQ; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bxe:Bxe_B2039 hypothetical protein.


ensembl_gene_id: Bphy_3262
symbol: Bphy_3262
gene_biotype: protein_coding
description:
  Peptidase M23B; PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: bxe:Bxe_B1694 putative lipoprotein NlpD.


ensembl_gene_id: Bphy_3264
symbol: Bphy_3264
gene_biotype: protein_coding
description:
  Transcriptional regulator, DeoR family; PFAM: regulatory protein GntR HTH; regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: spe:Spro_2259 transcriptional regulator, DeoR family.


ensembl_gene_id: Bphy_3266
symbol: Bphy_3266
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_C1098 transcriptional regulator, AraC family.


ensembl_gene_id: Bphy_3274
symbol: Bphy_3274
gene_biotype: protein_coding
description:
  PFAM: sugar transferase; KEGG: bur:Bcep18194_C7401 undecaprenyl-phosphate galactosephosphotransferase.


ensembl_gene_id: Bphy_3276
symbol: Bphy_3276
gene_biotype: protein_coding
description:
  Capsular exopolysaccharide family; KEGG: psa:PST_2493 tyrosine-protein kinase; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein.


ensembl_gene_id: Bphy_3277
symbol: Bphy_3277
gene_biotype: protein_coding
description:
  PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: pfo:Pfl_3845 protein tyrosine phosphatase.


ensembl_gene_id: Bphy_3284
symbol: lcdH
gene_biotype: protein_coding
description:
  3-hydroxyacyl-CoA dehydrogenase NAD-binding; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine.


ensembl_gene_id: Bphy_3285
symbol: Bphy_3285
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF849; KEGG: bch:Bcen2424_5051 protein of unknown function DUF849.


ensembl_gene_id: Bphy_3286
symbol: Bphy_3286
gene_biotype: protein_coding
description:
  TIGRFAM: choline ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bxe:Bxe_B0828 ABC glycine betaine transporter, periplasmic ligand binding protein.


ensembl_gene_id: Bphy_3287
symbol: Bphy_3287
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bxe:Bxe_B0829 transcriptional regulator, AraC family.


ensembl_gene_id: Bphy_3289
symbol: Bphy_3289
gene_biotype: protein_coding
description:
  TIGRFAM: choline ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bxe:Bxe_B1572 ABC proline/glycine betaine transporter, periplasmic ligand binding protein.


ensembl_gene_id: Bphy_3291
symbol: Bphy_3291
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; TIGRFAM: choline sulfate-utilization transcription factor; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bte:BTH_II1856 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_3293
symbol: Bphy_3293
gene_biotype: protein_coding
description:
  PFAM: amino acid permease-associated region; KEGG: bam:Bamb_4487 amino acid permease-associated region.


ensembl_gene_id: Bphy_3294
symbol: Bphy_3294
gene_biotype: protein_coding
description:
  PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bch:Bcen2424_5076 substrate-binding region of ABC-type glycine betaine transport system.


ensembl_gene_id: Bphy_3295
symbol: Bphy_3295
gene_biotype: protein_coding
description:
  PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bam:Bamb_4489 oxidoreductase FAD-binding domain protein.


ensembl_gene_id: Bphy_3298
symbol: Bphy_3298
gene_biotype: protein_coding
description:
  PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: bam:Bamb_4492 electron transfer flavoprotein, alpha subunit.


ensembl_gene_id: Bphy_3299
symbol: Bphy_3299
gene_biotype: protein_coding
description:
  PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bte:BTH_II1864 iron-sulfur cluster binding protein.


ensembl_gene_id: Bphy_3300
symbol: Bphy_3300
gene_biotype: protein_coding
description:
  PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_B1582 NADH-flavin oxidoreductase / NADH oxidase family protein.


ensembl_gene_id: Bphy_3304
symbol: Bphy_3304
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bvi:Bcep1808_3424 transcriptional regulator, AraC family.


ensembl_gene_id: Bphy_3305
symbol: Bphy_3305
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: Bphy_3307
symbol: Bphy_3307
gene_biotype: protein_coding
description:
  TIGRFAM: formaldehyde dehydrogenase, glutathione-independent; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bxe:Bxe_B1589 glutathione-independent formaldehyde dehydrogenase.


ensembl_gene_id: Bphy_3308
symbol: betI
gene_biotype: protein_coding
description:
  Transcriptional regulator, TetR family; Repressor involved in the biosynthesis of the osmoprotectant glycine betaine. It represses transcription of the choline transporter BetT and the genes of BetAB involved in the synthesis of glycine betaine (By similarity).


ensembl_gene_id: Bphy_3309
symbol: betB
gene_biotype: protein_coding
description:
  Betaine aldehyde dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid.


ensembl_gene_id: Bphy_3310
symbol: betA
gene_biotype: protein_coding
description:
  Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.


ensembl_gene_id: Bphy_3311
symbol: Bphy_3311
gene_biotype: protein_coding
description:
  PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bpd:BURPS668_A1931 permeases of the major facilitator superfamily.


ensembl_gene_id: Bphy_3313
symbol: Bphy_3313
gene_biotype: protein_coding
description:
  Response regulator receiver protein; PFAM: sigma-54 factor interaction domain-containing protein; KEGG: bpd:BURPS668_0636 sigma-54 dependent transcriptional regulator.


ensembl_gene_id: Bphy_3315
symbol: Bphy_3315
gene_biotype: protein_coding
description:
  PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bxe:Bxe_B1744 putative 2-hydroxyacid dehydrogenase.


ensembl_gene_id: Bphy_3318
symbol: Bphy_3318
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rru:Rru_A2875 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_3323
symbol: Bphy_3323
gene_biotype: protein_coding
description:
  PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rme:Rmet_4639 glyoxalase/bleomycin resistance protein/dioxygenase.


ensembl_gene_id: Bphy_3324
symbol: Bphy_3324
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: bxe:Bxe_B1753 transcriptional regulator, AraC family.


ensembl_gene_id: Bphy_3325
symbol: Bphy_3325
gene_biotype: protein_coding
description:
  PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bxe:Bxe_B1754 zinc-containing alcohol dehydrogenase superfamily.


ensembl_gene_id: Bphy_3326
symbol: Bphy_3326
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B1755 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_3331
symbol: Bphy_3331
gene_biotype: protein_coding
description:
  TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: FAD dependent oxidoreductase; glycine cleavage T protein (aminomethyl transferase); FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Glycine cleavage T-protein barrel; KEGG: bch:Bcen2424_5149 sarcosine oxidase, alpha subunit family; Belongs to the GcvT family.


ensembl_gene_id: Bphy_3333
symbol: Bphy_3333
gene_biotype: protein_coding
description:
  TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase; KEGG: bvi:Bcep1808_3459 sarcosine oxidase, beta subunit family.


ensembl_gene_id: Bphy_3334
symbol: Bphy_3334
gene_biotype: protein_coding
description:
  L-serine dehydratase 1; KEGG: reu:Reut_B4831 iron-sulfur-dependent L-serine dehydratase single chain form; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain.


ensembl_gene_id: Bphy_3335
symbol: Bphy_3335
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bxe:Bxe_B1602 transcriptional regulator, AraC family.


ensembl_gene_id: Bphy_3336
symbol: Bphy_3336
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF6 transmembrane; KEGG: bxe:Bxe_A3027 putative 10 TMS drug/metabolite exporter, DME family, DMT superfamily.


ensembl_gene_id: Bphy_3337
symbol: Bphy_3337
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A3026 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_3343
symbol: Bphy_3343
gene_biotype: protein_coding
description:
  PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: bxe:Bxe_B1765 ornithine cyclodeaminase/Mu-crystallin family protein.


ensembl_gene_id: Bphy_3344
symbol: Bphy_3344
gene_biotype: protein_coding
description:
  PFAM: proline racemase; KEGG: bxe:Bxe_B1024 putative proline racemase; Belongs to the proline racemase family.


ensembl_gene_id: Bphy_3347
symbol: Bphy_3347
gene_biotype: protein_coding
description:
  PFAM: response regulator receiver; BetR domain protein; KEGG: bxe:Bxe_B1770 response regulator receiver domain protein(CheY).


ensembl_gene_id: Bphy_3348
symbol: Bphy_3348
gene_biotype: protein_coding
description:
  Integral membrane sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_B1771 periplasmic sensor hybrid histidine kinase.


ensembl_gene_id: Bphy_3352
symbol: Bphy_3352
gene_biotype: protein_coding
description:
  PFAM: Glutathione S-transferase domain; KEGG: bxe:Bxe_B1775 glutathione S-transferase; Belongs to the GST superfamily.


ensembl_gene_id: Bphy_3353
symbol: Bphy_3353
gene_biotype: protein_coding
description:
  PFAM: Glutathione S-transferase domain; KEGG: bja:bll8133 glutathione S-transferase; Belongs to the GST superfamily.


ensembl_gene_id: Bphy_3354
symbol: Bphy_3354
gene_biotype: protein_coding
description:
  Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: bxe:Bxe_B1776 ferric uptake regulator (FUR) family; Belongs to the Fur family.


ensembl_gene_id: Bphy_3355
symbol: Bphy_3355
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, Fis family; PFAM: response regulator receiver; KEGG: bxe:Bxe_B1777 response regulator receiver domain protein(CheY).


ensembl_gene_id: Bphy_3357
symbol: Bphy_3357
gene_biotype: protein_coding
description:
  TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B1779 major facilitator superfamily (MFS) multidrug efflux pump, EmrB/QacA subfamily.


ensembl_gene_id: Bphy_3360
symbol: Bphy_3360
gene_biotype: protein_coding
description:
  TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rme:Rmet_5590 RND efflux system, outer membrane lipoprotein, NodT.


ensembl_gene_id: Bphy_3361
symbol: Bphy_3361
gene_biotype: protein_coding
description:
  TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rme:Rmet_5591 drug resistance transporter EmrB/QacA subfamily.


ensembl_gene_id: Bphy_3363
symbol: Bphy_3363
gene_biotype: protein_coding
description:
  PFAM: regulatory protein TetR; Transcriptional regulator TetR; KEGG: bch:Bcen2424_3902 transcriptional regulator, TetR family.


ensembl_gene_id: Bphy_3365
symbol: Bphy_3365
gene_biotype: protein_coding
description:
  PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_B1787 putative phosphinothricin N-acetyltransferase.


ensembl_gene_id: Bphy_3382
symbol: Bphy_3382
gene_biotype: protein_coding
description:
  Phage-related protein tail component-like protein; KEGG: rso:RSc1698 probable bacteriophage protein.


ensembl_gene_id: Bphy_3385
symbol: Bphy_3385
gene_biotype: protein_coding
description:
  TIGRFAM: phage minor tail protein L; PFAM: minor tail protein L; KEGG: ypp:YPDSF_4037 phage tail protein.


ensembl_gene_id: Bphy_3391
symbol: Bphy_3391
gene_biotype: protein_coding
description:
  TIGRFAM: phage protein, HK97 gp10 family; PFAM: TP901-1 ORF40 family protein; KEGG: asu:Asuc_1243 phage protein, HK97 GP10 family.


ensembl_gene_id: Bphy_3392
symbol: Bphy_3392
gene_biotype: protein_coding
description:
  TIGRFAM: phage head-tail adaptor; PFAM: putative head-tail adaptor protein; KEGG: asu:Asuc_1242 phage head-tail adaptor, putative.


ensembl_gene_id: Bphy_3395
symbol: Bphy_3395
gene_biotype: protein_coding
description:
  TIGRFAM: phage prohead protease, HK97 family; PFAM: peptidase U35 phage prohead HK97; KEGG: nar:Saro_0648 peptidase U35, phage prohead HK97.


ensembl_gene_id: Bphy_3396
symbol: Bphy_3396
gene_biotype: protein_coding
description:
  TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; KEGG: bpm:BURPS1710b_1680 phage portal protein, HK97 family.


ensembl_gene_id: Bphy_3398
symbol: Bphy_3398
gene_biotype: protein_coding
description:
  TIGRFAM: phage terminase, small subunit, P27 family; PFAM: terminase small subunit putative P27; KEGG: rsh:Rsph17029_0646 phage terminase, small subunit, putative, P27 family.


ensembl_gene_id: Bphy_3399
symbol: Bphy_3399
gene_biotype: protein_coding
description:
  TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: oan:Oant_1510 DNA-cytosine methyltransferase.


ensembl_gene_id: Bphy_3413
symbol: Bphy_3413
gene_biotype: protein_coding
description:
  Phage transcriptional regulator, AlpA; PFAM: Prophage CP4-57 regulatory; KEGG: spc:Sputcn32_3522 phage transcriptional regulator, AlpA.


ensembl_gene_id: Bphy_3423
symbol: Bphy_3423
gene_biotype: protein_coding
description:
  PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rca:Rcas_1171 DNA methylase N-4/N-6 domain protein; Belongs to the N(4)/N(6)-methyltransferase family.


ensembl_gene_id: Bphy_3424
symbol: Bphy_3424
gene_biotype: protein_coding
description:
  PFAM: integrase family protein; KEGG: bxe:Bxe_A3658 putative bacteriophage integrase; Belongs to the 'phage' integrase family.


ensembl_gene_id: Bphy_3427
symbol: Bphy_3427
gene_biotype: protein_coding
description:
  GAF modulated sigma54 specific transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B1075 sigma54 specific transcriptional regulator with GAF sensor, fis family.


ensembl_gene_id: Bphy_3431
symbol: Bphy_3431
gene_biotype: protein_coding
description:
  PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: bur:Bcep18194_A3938 ornithine cyclodeaminase/mu-crystallin.


ensembl_gene_id: Bphy_3432
symbol: Bphy_3432
gene_biotype: protein_coding
description:
  PFAM: extracellular solute-binding protein family 3; KEGG: bch:Bcen2424_0849 extracellular solute-binding protein, family 3; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: Bphy_3443
symbol: Bphy_3443
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bxe:Bxe_C0727 transcriptional regulator, GntR family.


ensembl_gene_id: Bphy_3445
symbol: Bphy_3445
gene_biotype: protein_coding
description:
  PFAM: response regulator receiver; ANTAR domain protein; KEGG: bxe:Bxe_B1048 response regulator receiver (CheY) and ANTAR domain protein.


ensembl_gene_id: Bphy_3447
symbol: Bphy_3447
gene_biotype: protein_coding
description:
  TIGRFAM: choline ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bam:Bamb_4564 substrate-binding region of ABC-type glycine betaine transport system.


ensembl_gene_id: Bphy_3448
symbol: Bphy_3448
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bxe:Bxe_B1614 transcriptional regulator, AraC family.


ensembl_gene_id: Bphy_3449
symbol: Bphy_3449
gene_biotype: protein_coding
description:
  TIGRFAM: choline ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1615 ABC proline/glycine betaine transporter, inner membrane subunit.


ensembl_gene_id: Bphy_3450
symbol: Bphy_3450
gene_biotype: protein_coding
description:
  KEGG: bpd:BURPS668_A2027 glycine betaine/L-proline ABC transporter, ATP-binding subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.


ensembl_gene_id: Bphy_3451
symbol: Bphy_3451
gene_biotype: protein_coding
description:
  PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: bxe:Bxe_A4479 dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.


ensembl_gene_id: Bphy_3453
symbol: Bphy_3453
gene_biotype: protein_coding
description:
  TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_B0733 type I secretion outer membrane protein, TolC.


ensembl_gene_id: Bphy_3454
symbol: Bphy_3454
gene_biotype: protein_coding
description:
  PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; KEGG: bxe:Bxe_B0732 ABC bacteriocin/lantibiotic exporter, fused ATPase inner membrane and peptidase subunits.


ensembl_gene_id: Bphy_3459
symbol: Bphy_3459
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bma:BMA1034 DNA-binding response regulator.


ensembl_gene_id: Bphy_3460
symbol: Bphy_3460
gene_biotype: protein_coding
description:
  TIGRFAM: rhamnose ABC transporter, periplasmic rhamnose-binding protein; KEGG: bxe:Bxe_B1038 ABC sugar transporter, periplasmic ligand binding protein.


ensembl_gene_id: Bphy_3461
symbol: Bphy_3461
gene_biotype: protein_coding
description:
  Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B1037 ABC sugar transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Bphy_3462
symbol: Bphy_3462
gene_biotype: protein_coding
description:
  Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B1036 ABC sugar transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Bphy_3466
symbol: Bphy_3466
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B1032 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_3467
symbol: Bphy_3467
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B1031 putative short-chain alcohol dehydrogenase.


ensembl_gene_id: Bphy_3468
symbol: rhmD
gene_biotype: protein_coding
description:
  Mandelate racemase/muconate lactonizing protein; Catalyzes the dehydration of L-rhamnonate to 2-keto-3-deoxy- L-rhamnonate (KDR).


ensembl_gene_id: Bphy_3469
symbol: Bphy_3469
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B1029 major facilitator superfamily (MFS) metabolite/H+ symporter.


ensembl_gene_id: Bphy_3470
symbol: Bphy_3470
gene_biotype: protein_coding
description:
  PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_B1028 putative 3-oxoacyl-(acyl-carrier protein) reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Bphy_3471
symbol: Bphy_3471
gene_biotype: protein_coding
description:
  PFAM: NADPH-dependent FMN reductase; KEGG: bxe:Bxe_B1014 NADPH-dependent FMN reductase family protein.


ensembl_gene_id: Bphy_3486
symbol: Bphy_3486
gene_biotype: protein_coding
description:
  TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_A1741 RND efflux system, outer membrane lipoprotein, NodT family.


ensembl_gene_id: Bphy_3487
symbol: Bphy_3487
gene_biotype: protein_coding
description:
  PFAM: acriflavin resistance protein; KEGG: mms:mma_1682 AcrB/AcrD/AcrF family membrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: Bphy_3488
symbol: Bphy_3488
gene_biotype: protein_coding
description:
  PFAM: acriflavin resistance protein; KEGG: cvi:CV_2733 probable drug efflux pump transmembrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: Bphy_3489
symbol: Bphy_3489
gene_biotype: protein_coding
description:
  TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rso:RS03141 putative resistance transmembrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Bphy_3490
symbol: Bphy_3490
gene_biotype: protein_coding
description:
  TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bte:BTH_I0682 RND efflux system, outer membrane lipoprotein, NodT family.


ensembl_gene_id: Bphy_3493
symbol: Bphy_3493
gene_biotype: protein_coding
description:
  PFAM: regulatory protein TetR; Tetracycline transcriptional repressor MAATS-type domain protein; KEGG: bur:Bcep18194_B1196 transcriptional regulator, TetR family.


ensembl_gene_id: Bphy_3494
symbol: Bphy_3494
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bvi:Bcep1808_4761 two component transcriptional regulator, winged helix family.


ensembl_gene_id: Bphy_3495
symbol: Bphy_3495
gene_biotype: protein_coding
description:
  Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bvi:Bcep1808_4762 integral membrane sensor signal transduction histidine kinase.


ensembl_gene_id: Bphy_3499
symbol: Bphy_3499
gene_biotype: protein_coding
description:
  PFAM: Mammalian cell entry related domain protein; KEGG: rru:Rru_A2447 mammalian cell entry related.


ensembl_gene_id: Bphy_3503
symbol: Bphy_3503
gene_biotype: protein_coding
description:
  PFAM: TrkA-N domain protein; KEGG: cyb:CYB_1806 potassium transporter, voltage-gated ion channel (VIC) family.


ensembl_gene_id: Bphy_3504
symbol: Bphy_3504
gene_biotype: protein_coding
description:
  PFAM: Sulfate transporter/antisigma-factor antagonist STAS; sulphate transporter; KEGG: rme:Rmet_0606 sulphate transporter.


ensembl_gene_id: Bphy_3505
symbol: Bphy_3505
gene_biotype: protein_coding
description:
  PFAM: acriflavin resistance protein; KEGG: rpc:RPC_1357 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: Bphy_3506
symbol: Bphy_3506
gene_biotype: protein_coding
description:
  TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: tbd:Tbd_2532 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Bphy_3507
symbol: Bphy_3507
gene_biotype: protein_coding
description:
  TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pca:Pcar_0814 outer membrane protein.


ensembl_gene_id: Bphy_3510
symbol: Bphy_3510
gene_biotype: protein_coding
description:
  4-hydroxy-2-oxovalerate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family.


ensembl_gene_id: Bphy_3511
symbol: Bphy_3511
gene_biotype: protein_coding
description:
  Acetaldehyde dehydrogenase (acetylating); Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.


ensembl_gene_id: Bphy_3514
symbol: Bphy_3514
gene_biotype: protein_coding
description:
  PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mav:MAV_2516 extradiol ring cleaving catechol dioxygenase.


ensembl_gene_id: Bphy_3515
symbol: Bphy_3515
gene_biotype: protein_coding
description:
  PFAM: alpha/beta hydrolase fold; KEGG: mav:MAV_2517 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase.


ensembl_gene_id: Bphy_3520
symbol: Bphy_3520
gene_biotype: protein_coding
description:
  Alpha amylase catalytic region; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: sfu:Sfum_2956 glycogen debranching enzyme GlgX; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: Bphy_3526
symbol: Bphy_3526
gene_biotype: protein_coding
description:
  PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: dsy:DSY3535 putative anaerobic dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: Bphy_3527
symbol: Bphy_3527
gene_biotype: protein_coding
description:
  PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pla:Plav_1539 glyoxalase/bleomycin resistance protein/dioxygenase.


ensembl_gene_id: Bphy_3530
symbol: Bphy_3530
gene_biotype: protein_coding
description:
  PFAM: AMP-dependent synthetase and ligase; KEGG: bch:Bcen2424_5777 AMP-dependent synthetase and ligase.


ensembl_gene_id: Bphy_3531
symbol: Bphy_3531
gene_biotype: protein_coding
description:
  PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bch:Bcen2424_5776 fumarylacetoacetate (FAA) hydrolase.


ensembl_gene_id: Bphy_3532
symbol: Bphy_3532
gene_biotype: protein_coding
description:
  PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bch:Bcen2424_5775 glyoxalase/bleomycin resistance protein/dioxygenase.


ensembl_gene_id: Bphy_3539
symbol: Bphy_3539
gene_biotype: protein_coding
description:
  TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bvi:Bcep1808_1683 efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Bphy_3545
symbol: Bphy_3545
gene_biotype: protein_coding
description:
  PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bch:Bcen2424_6530 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Bphy_3547
symbol: Bphy_3547
gene_biotype: protein_coding
description:
  TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bam:Bamb_6578 efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Bphy_3549
symbol: Bphy_3549
gene_biotype: protein_coding
description:
  TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bam:Bamb_6576 RND efflux system, outer membrane lipoprotein, NodT family.


ensembl_gene_id: Bphy_3550
symbol: Bphy_3550
gene_biotype: protein_coding
description:
  PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reu:Reut_C6137 NAD-dependent epimerase/dehydratase:short-chain dehydrogenase/reductase SDR.


ensembl_gene_id: Bphy_3551
symbol: Bphy_3551
gene_biotype: protein_coding
description:
  PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: reu:Reut_C6136 metal-dependent phosphohydrolase, HD subdomain.


ensembl_gene_id: Bphy_3552
symbol: Bphy_3552
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family with aminotransferase domain; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: reu:Reut_C6135 regulatory protein GntR, HTH:aminotransferase, class I and II.


ensembl_gene_id: Bphy_3555
symbol: Bphy_3555
gene_biotype: protein_coding
description:
  KEGG: reu:Reut_C6131 metal-dependent phosphohydrolase, HD subdomain; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region.


ensembl_gene_id: Bphy_3558
symbol: Bphy_3558
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_B0964 putative ABC phosphate/phosphonate transporter, periplasmic ligand binding protein.


ensembl_gene_id: Bphy_3559
symbol: Bphy_3559
gene_biotype: protein_coding
description:
  Carbamoyl-phosphate synthase L chain ATP-binding; PFAM: biotin/lipoyl attachment domain-containing protein; phosphoribosylglycinamide synthetase; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: bxe:Bxe_B0963 putative biotin carboxylase.


ensembl_gene_id: Bphy_3560
symbol: Bphy_3560
gene_biotype: protein_coding
description:
  PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bxe:Bxe_B0962 putative enoyl coenzyme A hydratase-like protein; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Bphy_3561
symbol: Bphy_3561
gene_biotype: protein_coding
description:
  Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: bxe:Bxe_B0961 propionyl-CoA carboxylase.


ensembl_gene_id: Bphy_3562
symbol: Bphy_3562
gene_biotype: protein_coding
description:
  PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_B0960 isovaleryl-CoA dehydrogenase.


ensembl_gene_id: Bphy_3567
symbol: Bphy_3567
gene_biotype: protein_coding
description:
  PFAM: Aldehyde Dehydrogenase; KEGG: bxe:Bxe_B0945 aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: Bphy_3572
symbol: Bphy_3572
gene_biotype: protein_coding
description:
  Glutamate--putrescine ligase; PFAM: glutamine synthetase catalytic region; KEGG: bxe:Bxe_B0942 glutamate--ammonia ligase.


ensembl_gene_id: Bphy_3573
symbol: Bphy_3573
gene_biotype: protein_coding
description:
  PFAM: aminotransferase class-III; KEGG: bxe:Bxe_B0941 putative aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: Bphy_3581
symbol: Bphy_3581
gene_biotype: protein_coding
description:
  PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bam:Bamb_3927 transcriptional regulator, GntR family.


ensembl_gene_id: Bphy_3582
symbol: Bphy_3582
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: oan:Oant_3069 drug resistance transporter, EmrB/QacA subfamily.


ensembl_gene_id: Bphy_3583
symbol: Bphy_3583
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: oan:Oant_3071 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_3585
symbol: Bphy_3585
gene_biotype: protein_coding
description:
  PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bxe:Bxe_B0144 histone-like nucleoid-structuring protein H-NS.


ensembl_gene_id: Bphy_3587
symbol: Bphy_3587
gene_biotype: protein_coding
description:
  PFAM: response regulator receiver; KEGG: bxe:Bxe_B3007 response regulator receiver domain protein(CheY).


ensembl_gene_id: Bphy_3589
symbol: Bphy_3589
gene_biotype: protein_coding
description:
  PFAM: chemotaxis sensory transducer; KEGG: bxe:Bxe_B3010 methyl-accepting chemotaxis sensory transducer.


ensembl_gene_id: Bphy_3590
symbol: Bphy_3590
gene_biotype: protein_coding
description:
  Putative CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: bxe:Bxe_B3011 CheA signal transduction histidine kinases (STHK).


ensembl_gene_id: Bphy_3592
symbol: Bphy_3592
gene_biotype: protein_coding
description:
  Monosaccharide-transporting ATPase; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bxe:Bxe_B0894 ABC sugar transporter, periplasmic ligand binding protein.


ensembl_gene_id: Bphy_3593
symbol: Bphy_3593
gene_biotype: protein_coding
description:
  Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B0893 ABC sugar transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Bphy_3594
symbol: Bphy_3594
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B0892 ABC sugar transporter, ATPase subunit.


ensembl_gene_id: Bphy_3599
symbol: Bphy_3599
gene_biotype: protein_coding
description:
  Diguanylate cyclase/phosphodiesterase with GAF sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; KEGG: psb:Psyr_2432 GGDEF.


ensembl_gene_id: Bphy_3601
symbol: Bphy_3601
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_C0156 ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit.


ensembl_gene_id: Bphy_3602
symbol: Bphy_3602
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_C0155 ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit.


ensembl_gene_id: Bphy_3603
symbol: Bphy_3603
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_C0154 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein.


ensembl_gene_id: Bphy_3610
symbol: Bphy_3610
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rso:RSc3138 probable oxidoreductase protein.


ensembl_gene_id: Bphy_3612
symbol: Bphy_3612
gene_biotype: protein_coding
description:
  KEGG: reu:Reut_B4671 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein.


ensembl_gene_id: Bphy_3613
symbol: Bphy_3613
gene_biotype: protein_coding
description:
  PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: reu:Reut_B4668 fumarylacetoacetate (FAA) hydrolase.


ensembl_gene_id: Bphy_3614
symbol: frc
gene_biotype: protein_coding
description:
  formyl-CoA transferase; Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl- CoA to oxalate; Belongs to the CoA-transferase III family. Frc subfamily.


ensembl_gene_id: Bphy_3616
symbol: Bphy_3616
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_B2761 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.


ensembl_gene_id: Bphy_3618
symbol: Bphy_3618
gene_biotype: protein_coding
description:
  TIGRFAM: oxalyl-CoA decarboxylase; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bxe:Bxe_B2759 putative oxalyl-CoA decarboxylase; Belongs to the TPP enzyme family.


ensembl_gene_id: Bphy_3619
symbol: Bphy_3619
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bxe:Bxe_B2268 transcriptional regulator, GntR family.


ensembl_gene_id: Bphy_3621
symbol: Bphy_3621
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B2262 putative major facilitator superfamily (MFS)oxalate/formate antiporter.


ensembl_gene_id: Bphy_3626
symbol: Bphy_3626
gene_biotype: protein_coding
description:
  PFAM: cyclic nucleotide-binding; MscS Mechanosensitive ion channel; KEGG: bxe:Bxe_B2387 cyclic nucleotide-regulated small mechanosensitive ion channel.


ensembl_gene_id: Bphy_3627
symbol: Bphy_3627
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B1640 ABC lipoprotein exporter, ATPase subunit.


ensembl_gene_id: Bphy_3628
symbol: Bphy_3628
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF214; KEGG: bxe:Bxe_B1641 ABC liporpotein exporter, fused inner membrane subunits.


ensembl_gene_id: Bphy_3640
symbol: Bphy_3640
gene_biotype: protein_coding
description:
  TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: bam:Bamb_5366 rhs element Vgr protein.


ensembl_gene_id: Bphy_3645
symbol: Bphy_3645
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_A2081 putative TRAP-type uncharacterized transport system, periplasmic component protein.


ensembl_gene_id: Bphy_3646
symbol: Bphy_3646
gene_biotype: protein_coding
description:
  TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: bte:BTH_I1785 ubiquinol oxidase, subunit IV.


ensembl_gene_id: Bphy_3647
symbol: Bphy_3647
gene_biotype: protein_coding
description:
  TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: bps:BPSL2380 cytochrome o ubiquinol oxidase subunit III.


ensembl_gene_id: Bphy_3648
symbol: Bphy_3648
gene_biotype: protein_coding
description:
  KEGG: bmn:BMA10247_A0226 ubiquinol oxidase, subunit I; TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: Bphy_3649
symbol: Bphy_3649
gene_biotype: protein_coding
description:
  TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; COX aromatic rich domain protein; KEGG: bvi:Bcep1808_2823 ubiquinol oxidase, subunit II.


ensembl_gene_id: Bphy_3656
symbol: Bphy_3656
gene_biotype: protein_coding
description:
  TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_B1206 AhpF.


ensembl_gene_id: Bphy_3657
symbol: Bphy_3657
gene_biotype: protein_coding
description:
  Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.


ensembl_gene_id: Bphy_3658
symbol: Bphy_3658
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_B0929 DNA polymerase II; PFAM: DNA polymerase B exonuclease; DNA polymerase B region; SMART: DNA-directed DNA polymerase B.


ensembl_gene_id: Bphy_3659
symbol: Bphy_3659
gene_biotype: protein_coding
description:
  2-alkenal reductase; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: bxe:Bxe_B0630 putative serine protease.


ensembl_gene_id: Bphy_3664
symbol: Bphy_3664
gene_biotype: protein_coding
description:
  Sulphate transporter; PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: bxe:Bxe_A3224 sulphate transporter.


ensembl_gene_id: Bphy_3669
symbol: Bphy_3669
gene_biotype: protein_coding
description:
  TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase; KEGG: azc:AZC_4089 flavoprotein.


ensembl_gene_id: Bphy_3678
symbol: Bphy_3678
gene_biotype: protein_coding
description:
  Diguanylate cyclase with GAF sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: bxe:Bxe_B2239 putative diguanylate cyclase (GGDEF domain).


ensembl_gene_id: Bphy_3680
symbol: Bphy_3680
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF74; KEGG: bte:BTH_I2656 domain of unknown function, putative; Belongs to the UPF0145 family.


ensembl_gene_id: Bphy_3683
symbol: Bphy_3683
gene_biotype: protein_coding
description:
  PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pap:PSPA7_3642 probable acyl-CoA dehydrogenase.


ensembl_gene_id: Bphy_3686
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: Bphy_3687
symbol: Bphy_3687
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bvi:Bcep1808_6177 short-chain dehydrogenase/reductase SDR.


ensembl_gene_id: Bphy_3690
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: Bphy_3694
symbol: Bphy_3694
gene_biotype: protein_coding
description:
  PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: bxe:Bxe_C1359 dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.


ensembl_gene_id: Bphy_3695
symbol: Bphy_3695
gene_biotype: protein_coding
description:
  Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bvi:Bcep1808_5603 regulatory protein, LacI.


ensembl_gene_id: Bphy_3697
symbol: Bphy_3697
gene_biotype: protein_coding
description:
  TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bpm:BURPS1710b_A0245 uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family.


ensembl_gene_id: Bphy_3698
symbol: Bphy_3698
gene_biotype: protein_coding
description:
  PFAM: CBS domain containing protein; KEGG: bur:Bcep18194_B1304 CBS domain containing membrane protein.


ensembl_gene_id: Bphy_3699
symbol: Bphy_3699
gene_biotype: protein_coding
description:
  TIGRFAM: tRNA 2-selenouridine synthase; SMART: Rhodanese domain protein; KEGG: bte:BTH_I0620 YbbB; Belongs to the SelU family.


ensembl_gene_id: Bphy_3700
symbol: Bphy_3700
gene_biotype: protein_coding
description:
  TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: bxe:Bxe_B2035 putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains).


ensembl_gene_id: Bphy_3706
symbol: Bphy_3706
gene_biotype: protein_coding
description:
  PFAM: Aldehyde Dehydrogenase; KEGG: rme:Rmet_1898 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: Bphy_3707
symbol: Bphy_3707
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rpb:RPB_4389 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_3709
symbol: Bphy_3709
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF214; KEGG: bur:Bcep18194_A3400 ABC efflux pump, inner membrane subunit.


ensembl_gene_id: Bphy_3712
symbol: Bphy_3712
gene_biotype: protein_coding
description:
  TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bur:Bcep18194_A3403 secretion protein HlyD family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Bphy_3714
symbol: Bphy_3714
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B1021 major facilitator superfamily (MFS) transporter.


ensembl_gene_id: Bphy_3716
symbol: Bphy_3716
gene_biotype: protein_coding
description:
  PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: xau:Xaut_1088 peptidase S8 and S53 subtilisin kexin sedolisin.


ensembl_gene_id: Bphy_3717
symbol: Bphy_3717
gene_biotype: protein_coding
description:
  PFAM: NUDIX hydrolase; NADH pyrophosphatase-like; Zinc ribbon NADH pyrophosphatase; KEGG: bxe:Bxe_A2188 putative phosphohydrolase, MutT/NUDIX.


ensembl_gene_id: Bphy_3725
symbol: Bphy_3725
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_B1730 mannose-1-phosphateguanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein.


ensembl_gene_id: Bphy_3728
symbol: Bphy_3728
gene_biotype: protein_coding
description:
  PFAM: glycosyl transferase group 1; KEGG: bte:BTH_I0524 glycosyl transferase, group 1 family protein.


ensembl_gene_id: Bphy_3732
symbol: Bphy_3732
gene_biotype: protein_coding
description:
  PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A3712 putative glycosyl transferases group 1 protein.


ensembl_gene_id: Bphy_3733
symbol: Bphy_3733
gene_biotype: protein_coding
description:
  Capsular exopolysaccharide family; KEGG: bam:Bamb_6487 hypothetical protein; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein.


ensembl_gene_id: Bphy_3734
symbol: Bphy_3734
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: reh:H16_A1853 transcriptional regulator, AraC-family.


ensembl_gene_id: Bphy_3740
symbol: Bphy_3740
gene_biotype: protein_coding
description:
  PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bvi:Bcep1808_6193 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.


ensembl_gene_id: Bphy_3741
symbol: Bphy_3741
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: cac:CAC3280 possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats.


ensembl_gene_id: Bphy_3744
symbol: Bphy_3744
gene_biotype: protein_coding
description:
  TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B1202 major facilitator superfamily (MFS) multidrug efflux pump.


ensembl_gene_id: Bphy_3746
symbol: Bphy_3746
gene_biotype: protein_coding
description:
  PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ret:RHE_PF00545 hypothetical protein.


ensembl_gene_id: Bphy_3758
symbol: Bphy_3758
gene_biotype: protein_coding
description:
  PFAM: alpha/beta hydrolase fold; biotin/lipoyl attachment domain-containing protein; KEGG: bxe:Bxe_B0315 putative acetoin dehydrogenase.


ensembl_gene_id: Bphy_3759
symbol: Bphy_3759
gene_biotype: protein_coding
description:
  PFAM: Transketolase central region; Transketolase domain protein; KEGG: bxe:Bxe_B0314 acetoin dehydrogenase, beta subunit.


ensembl_gene_id: Bphy_3762
symbol: Bphy_3762
gene_biotype: protein_coding
description:
  GAF modulated sigma54 specific transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B0310 sigma54 specific transcriptional regulator with GAF sensor, fis family.


ensembl_gene_id: Bphy_3763
symbol: Bphy_3763
gene_biotype: protein_coding
description:
  Helix-turn-helix type 11 domain protein; PFAM: protein of unknown function UPF0074; regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: nfa:nfa19320 putative transcriptional regulator.


ensembl_gene_id: Bphy_3765
symbol: Bphy_3765
gene_biotype: protein_coding
description:
  PFAM: Spore germination protein; amino acid permease-associated region; KEGG: bvi:Bcep1808_4744 amino acid permease-associated region.


ensembl_gene_id: Bphy_3767
symbol: Bphy_3767
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_B2167 beta-ketoadipyl-CoA thiolase (PcaF); TIGRFAM: acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Bphy_3768
symbol: Bphy_3768
gene_biotype: protein_coding
description:
  Transcriptional regulator, IclR family; TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bxe:Bxe_B2174 transcriptional regulator, IclR family.


ensembl_gene_id: Bphy_3769
symbol: Bphy_3769
gene_biotype: protein_coding
description:
  Amidohydrolase; KEGG: bur:Bcep18194_B0252 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein.


ensembl_gene_id: Bphy_3770
symbol: phnN
gene_biotype: protein_coding
description:
  Phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP).


ensembl_gene_id: Bphy_3771
symbol: Bphy_3771
gene_biotype: protein_coding
description:
  TIGRFAM: phosphonate metabolism protein; PFAM: protein of unknown function DUF1045; KEGG: bxe:Bxe_B2177 hypothetical protein.


ensembl_gene_id: Bphy_3772
symbol: Bphy_3772
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family; TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bxe:Bxe_B2178 transcriptional regulator, GntR family.


ensembl_gene_id: Bphy_3773
symbol: Bphy_3773
gene_biotype: protein_coding
description:
  TIGRFAM: phosphonate C-P lyase system protein PhnG; PFAM: phosphonate metabolism PhnG; KEGG: bxe:Bxe_B2179 putative phosphonate metabolism protein PhnG.


ensembl_gene_id: Bphy_3774
symbol: Bphy_3774
gene_biotype: protein_coding
description:
  TIGRFAM: phosphonate C-P lyase system protein PhnH; PFAM: phosphonate metabolism; KEGG: bxe:Bxe_B2180 putative phosphonate metabolism PhnH protein.


ensembl_gene_id: Bphy_3776
symbol: Bphy_3776
gene_biotype: protein_coding
description:
  Phosphonate metabolism PhnJ; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.


ensembl_gene_id: Bphy_3777
symbol: Bphy_3777
gene_biotype: protein_coding
description:
  Phosphonate C-P lyase system protein PhnK; KEGG: bxe:Bxe_B2183 ABC phophonate transporter, ATPase subunit PhnK; TIGRFAM: phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter related; SMART: AAA ATPase.


ensembl_gene_id: Bphy_3778
symbol: Bphy_3778
gene_biotype: protein_coding
description:
  Phosphonate C-P lyase system protein PhnL; KEGG: bxe:Bxe_B2184 ABC phophonate transporter, ATPase subunit PhnL; TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related; SMART: AAA ATPase.


ensembl_gene_id: Bphy_3779
symbol: Bphy_3779
gene_biotype: protein_coding
description:
  TIGRFAM: phosphonate metabolism protein PhnM; PFAM: Amidohydrolase 3; KEGG: bxe:Bxe_B2185 putative phosphonate metabolism protein PhnM.


ensembl_gene_id: Bphy_3780
symbol: Bphy_3780
gene_biotype: protein_coding
description:
  TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: bxe:Bxe_B2189 ABC lysine/arginine/ornithine transporter, periplasmic ligand binding protein; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: Bphy_3783
symbol: Bphy_3783
gene_biotype: protein_coding
description:
  PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: bam:Bamb_3882 pyridoxal-5'-phosphate-dependent enzyme, beta subunit.


ensembl_gene_id: Bphy_3790
symbol: Bphy_3790
gene_biotype: protein_coding
description:
  Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: Bphy_3792
symbol: Bphy_3792
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B2203 major facilitator superfamily (MFS) multidrug efflux pump.


ensembl_gene_id: Bphy_3793
symbol: Bphy_3793
gene_biotype: protein_coding
description:
  Threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bxe:Bxe_B2204 threonine aldolase.


ensembl_gene_id: Bphy_3794
symbol: Bphy_3794
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_A3034 putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS/PAC and CHASE sensors; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; CHASE domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.


ensembl_gene_id: Bphy_3798
symbol: Bphy_3798
gene_biotype: protein_coding
description:
  PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bam:Bamb_5022 major facilitator superfamily MFS_1.


ensembl_gene_id: Bphy_3801
symbol: Bphy_3801
gene_biotype: protein_coding
description:
  PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bxe:Bxe_B2421 putative MxaR-like protein.


ensembl_gene_id: Bphy_3808
symbol: Bphy_3808
gene_biotype: protein_coding
description:
  PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bxe:Bxe_A3016 putative TPR/sulfotransferase domain protein, FlbA-like.


ensembl_gene_id: Bphy_3811
symbol: Bphy_3811
gene_biotype: protein_coding
description:
  TIGRFAM: methylamine dehydrogenase accessory protein MauD; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bam:Bamb_4470 methylamine dehydrogenase accessory protein MauD.


ensembl_gene_id: Bphy_3812
symbol: Bphy_3812
gene_biotype: protein_coding
description:
  KEGG: bur:Bcep18194_B0604 amine dehydrogenase; Belongs to the aromatic amine dehydrogenase light chain family.


ensembl_gene_id: Bphy_3815
symbol: Bphy_3815
gene_biotype: protein_coding
description:
  PFAM: Aldehyde Dehydrogenase; KEGG: bch:Bcen2424_5056 aldehyde dehydrogenase (NAD(+)); Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: Bphy_3818
symbol: Bphy_3818
gene_biotype: protein_coding
description:
  Diguanylate phosphodiesterase; PFAM: EAL domain protein; KEGG: bxe:Bxe_B0796 putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains).


ensembl_gene_id: Bphy_3819
symbol: Bphy_3819
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B0795 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_3820
symbol: phnW
gene_biotype: protein_coding
description:
  2-aminoethylphosphonate aminotransferase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily.


ensembl_gene_id: Bphy_3821
symbol: Bphy_3821
gene_biotype: protein_coding
description:
  TIGRFAM: phosphonopyruvate decarboxylase; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: bxe:Bxe_B2234 putative thiamine pyrophosphate enzyme.


ensembl_gene_id: Bphy_3824
symbol: ftsI-2
gene_biotype: protein_coding
description:
  Peptidoglycan glycosyltransferase; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily.


ensembl_gene_id: Bphy_3825
symbol: Bphy_3825
gene_biotype: protein_coding
description:
  PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bvi:Bcep1808_2801 tetratricopeptide TPR_2 repeat protein.


ensembl_gene_id: Bphy_3832
symbol: Bphy_3832
gene_biotype: protein_coding
description:
  PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: bxe:Bxe_B0477 protein serine/threonine phosphatases.


ensembl_gene_id: Bphy_3833
symbol: Bphy_3833
gene_biotype: protein_coding
description:
  Putative sigma54 specific transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bxe:Bxe_B0476 sigma54 specific transcriptional regulator with PAS sensor, fis family.


ensembl_gene_id: Bphy_3834
symbol: Bphy_3834
gene_biotype: protein_coding
description:
  Cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter; PFAM: cyclic nucleotide-binding; ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; KEGG: bxe:Bxe_B0475 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter, fused ATPase and inner membrane subunits.


ensembl_gene_id: Bphy_3835
symbol: Bphy_3835
gene_biotype: protein_coding
description:
  PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bxe:Bxe_B0474 putative peptidyl-prolyl isomerase.


ensembl_gene_id: Bphy_3836
symbol: Bphy_3836
gene_biotype: protein_coding
description:
  PFAM: secretion protein HlyD family protein; KEGG: bxe:Bxe_B0473 ABC efflux pump, membrane fusion protein, HlyD subfamily.


ensembl_gene_id: Bphy_3837
symbol: Bphy_3837
gene_biotype: protein_coding
description:
  FHA domain containing protein; PFAM: Forkhead-associated protein; KEGG: bxe:Bxe_B0472 putative forkhead-associated protein.


ensembl_gene_id: Bphy_3838
symbol: Bphy_3838
gene_biotype: protein_coding
description:
  TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_B0471 ABC efflux system, outer membrane lipoprotein, NodT family.


ensembl_gene_id: Bphy_3842
symbol: Bphy_3842
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF323; peptidase C14 caspase catalytic subunit p20; KEGG: bxe:Bxe_B0467 hypothetical protein.


ensembl_gene_id: Bphy_3843
symbol: Bphy_3843
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function RIO1; protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: bxe:Bxe_B0466 serine/threonine protein kinase.


ensembl_gene_id: Bphy_3848
symbol: Bphy_3848
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: bxe:Bxe_B2244 hypothetical protein.


ensembl_gene_id: Bphy_3851
symbol: Bphy_3851
gene_biotype: protein_coding
description:
  PFAM: phosphoesterase PA-phosphatase related; SNARE associated Golgi protein; KEGG: bxe:Bxe_B2003 hypothetical protein.


ensembl_gene_id: Bphy_3853
symbol: Bphy_3853
gene_biotype: protein_coding
description:
  TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; MASE2 domain protein; KEGG: spe:Spro_1193 diguanylate cyclase.


ensembl_gene_id: Bphy_3856
symbol: Bphy_3856
gene_biotype: protein_coding
description:
  PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_B0631 hypothetical protein.


ensembl_gene_id: Bphy_3857
symbol: Bphy_3857
gene_biotype: protein_coding
description:
  Gamma-glutamyltransferase; KEGG: bxe:Bxe_B0629 gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase.


ensembl_gene_id: Bphy_3858
symbol: Bphy_3858
gene_biotype: protein_coding
description:
  PFAM: aminotransferase class-III; KEGG: bxe:Bxe_C0061 putative aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: Bphy_3859
symbol: Bphy_3859
gene_biotype: protein_coding
description:
  PFAM: Aldehyde Dehydrogenase; KEGG: bxe:Bxe_C0060 succinate-semialdehyde dehydrogenase (NAD(P)+); Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: Bphy_3860
symbol: Bphy_3860
gene_biotype: protein_coding
description:
  PFAM: regulatory protein AsnC/Lrp family; KEGG: bxe:Bxe_C0059 transcriptional regulator, AsnC family.


ensembl_gene_id: Bphy_3861
symbol: Bphy_3861
gene_biotype: protein_coding
description:
  TIGRFAM: ectoine utilization protein EutE; PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: bxe:Bxe_C0058 hypothetical protein.


ensembl_gene_id: Bphy_3862
symbol: Bphy_3862
gene_biotype: protein_coding
description:
  TIGRFAM: ectoine utilization protein EutD; PFAM: creatinase; peptidase M24; KEGG: vei:Veis_2149 peptidase M24.


ensembl_gene_id: Bphy_3863
symbol: Bphy_3863
gene_biotype: protein_coding
description:
  Ectoine utilization protein EutC; KEGG: bxe:Bxe_C0057 ornithine cyclodeaminase; TIGRFAM: ectoine utilization protein EutC; PFAM: ornithine cyclodeaminase/mu-crystallin; Shikimate/quinate 5-dehydrogenase.


ensembl_gene_id: Bphy_3864
symbol: Bphy_3864
gene_biotype: protein_coding
description:
  TIGRFAM: ectoine utilization protein EutB; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: bxe:Bxe_C0056 putative threonine dehydratase.


ensembl_gene_id: Bphy_3865
symbol: Bphy_3865
gene_biotype: protein_coding
description:
  PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bxe:Bxe_C0055 transcriptional regulator, GntR.


ensembl_gene_id: Bphy_3866
symbol: Bphy_3866
gene_biotype: protein_coding
description:
  TIGRFAM: ectoine/hydroxyectoine ABC transporter solute-binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: vei:Veis_2153 extracellular solute-binding protein, family 3.


ensembl_gene_id: Bphy_3867
symbol: Bphy_3867
gene_biotype: protein_coding
description:
  TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; ectoine/hydroxyectoine ABC transporter, permease protein EhuC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_2154 beta tubulin, autoregulation binding site.


ensembl_gene_id: Bphy_3868
symbol: Bphy_3868
gene_biotype: protein_coding
description:
  TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; ectoine/hydroxyectoine ABC transporter, permease protein EhuD; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_2155 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine.


ensembl_gene_id: Bphy_3869
symbol: Bphy_3869
gene_biotype: protein_coding
description:
  KEGG: vei:Veis_2156 ABC transporter related; TIGRFAM: ectoine/hydroxyectoine ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.


ensembl_gene_id: Bphy_3870
symbol: Bphy_3870
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B0628 major facilitator superfamily (MFS) multidrug efflux pump.


ensembl_gene_id: Bphy_3874
symbol: Bphy_3874
gene_biotype: protein_coding
description:
  PFAM: CDP-alcohol phosphatidyltransferase; KEGG: bxe:Bxe_B0624 hypothetical protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: Bphy_3885
symbol: Bphy_3885
gene_biotype: protein_coding
description:
  PFAM: Aldehyde Dehydrogenase; KEGG: bxe:Bxe_B2578 putative aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: Bphy_3886
symbol: Bphy_3886
gene_biotype: protein_coding
description:
  Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: bxe:Bxe_B2769 transcriptional regulator, XRE family.


ensembl_gene_id: Bphy_3887
symbol: Bphy_3887
gene_biotype: protein_coding
description:
  PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_B2773 4-hydroxyphenylpyruvate dioxygenase (Hpd).


ensembl_gene_id: Bphy_3888
symbol: Bphy_3888
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; TIGRFAM: pca operon transcription factor PcaQ; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B2774 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_3889
symbol: Bphy_3889
gene_biotype: protein_coding
description:
  TIGRFAM: protocatechuate 3,4-dioxygenase, beta subunit; PFAM: intradiol ring-cleavage dioxygenase; KEGG: bam:Bamb_3579 protocatechuate 3,4-dioxygenase, beta subunit.


ensembl_gene_id: Bphy_3890
symbol: Bphy_3890
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_B2776 protocatechuate 3,4-dioxygenase, alpha subunit(PcaG); TIGRFAM: protocatechuate 3,4-dioxygenase, alpha subunit; PFAM: intradiol ring-cleavage dioxygenase.


ensembl_gene_id: Bphy_3899
symbol: Bphy_3899
gene_biotype: protein_coding
description:
  Peptidoglycan glycosyltransferase; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: bxe:Bxe_A2197 putative penicillin-binding 1 (peptidoglycansynthetase) transmembrane protein, MrcA.


ensembl_gene_id: Bphy_3900
symbol: Bphy_3900
gene_biotype: protein_coding
description:
  PFAM: Na+/solute symporter; KEGG: bxe:Bxe_B0791 Na+/monocarboxylate symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: Bphy_3902
symbol: Bphy_3902
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B1211 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_3903
symbol: Bphy_3903
gene_biotype: protein_coding
description:
  PFAM: Pirin domain protein; Cupin 2 conserved barrel domain protein; KEGG: bxe:Bxe_B1210 hypothetical protein; Belongs to the pirin family.


ensembl_gene_id: Bphy_3908
symbol: Bphy_3908
gene_biotype: protein_coding
description:
  TIGRFAM: Rieske [2Fe-2S] domain protein, MocE subfamily; PFAM: Rieske [2Fe-2S] domain protein; KEGG: mlo:mlr4999 putative Rieske-like ferredoxin MocE.


ensembl_gene_id: Bphy_3909
symbol: Bphy_3909
gene_biotype: protein_coding
description:
  PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sme:SMc02016 putative ferredoxin reductase protein.


ensembl_gene_id: Bphy_3911
symbol: Bphy_3911
gene_biotype: protein_coding
description:
  Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; KEGG: atc:AGR_pAT_634 putative DNA-binding protein.


ensembl_gene_id: Bphy_3912
symbol: Bphy_3912
gene_biotype: protein_coding
description:
  PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: acr:Acry_2324 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Bphy_3913
symbol: Bphy_3913
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A3447 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_3920
symbol: Bphy_3920
gene_biotype: protein_coding
description:
  2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.


ensembl_gene_id: Bphy_3927
symbol: Bphy_3927
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bam:Bamb_2446 two component transcriptional regulator, winged helix family.


ensembl_gene_id: Bphy_3928
symbol: Bphy_3928
gene_biotype: protein_coding
description:
  Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rso:RS05645 probable two-component sensor histidine kinase transcription regulator protein.


ensembl_gene_id: Bphy_3929
symbol: Bphy_3929
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rso:RS05646 probable two-component response regulator transcription regulator protein.


ensembl_gene_id: Bphy_3935
symbol: Bphy_3935
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_5781 transcriptional regulator, AraC family.


ensembl_gene_id: Bphy_3942
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: Bphy_3944
symbol: rpsU-2
gene_biotype: protein_coding
description:
  PFAM: ribosomal protein S21; KEGG: bxe:Bxe_B2823 ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.


ensembl_gene_id: Bphy_3945
symbol: Bphy_3945
gene_biotype: protein_coding
description:
  HI0933 family protein; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_B2824 HI0933-like protein.


ensembl_gene_id: Bphy_3946
symbol: tsaD
gene_biotype: protein_coding
description:
  Metalloendopeptidase, glycoprotease family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: Bphy_3948
symbol: dxs
gene_biotype: protein_coding
description:
  Deoxyxylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: Bphy_3949
symbol: Bphy_3949
gene_biotype: protein_coding
description:
  PFAM: Polyprenyl synthetase; KEGG: bxe:Bxe_B2828 geranyltranstransferase; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: Bphy_3950
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: Bphy_3951
symbol: Bphy_3951
gene_biotype: protein_coding
description:
  PFAM: Rieske [2Fe-2S] domain protein; KEGG: bxe:Bxe_B2830 putative osmotic adaptation-related protein.


ensembl_gene_id: Bphy_3953
symbol: Bphy_3953
gene_biotype: protein_coding
description:
  PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: reu:Reut_B5816 Glu/Leu/Phe/Val dehydrogenase, C terminal:Glu/Leu/Phe/Val dehydrogenase, dimerisation region; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: Bphy_3954
symbol: Bphy_3954
gene_biotype: protein_coding
description:
  PFAM: regulatory protein AsnC/Lrp family; KEGG: rme:Rmet_4561 transcriptional regulator, AsnC family.


ensembl_gene_id: Bphy_3955
symbol: Bphy_3955
gene_biotype: protein_coding
description:
  TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: bxe:Bxe_B1411 putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains).


ensembl_gene_id: Bphy_3956
symbol: Bphy_3956
gene_biotype: protein_coding
description:
  TIGRFAM: YidE/YbjL duplication; PFAM: TrkA-C domain protein; YidE/YbjL duplication domain protein; KEGG: reh:H16_A1680 predicted permease.


ensembl_gene_id: Bphy_3957
symbol: Bphy_3957
gene_biotype: protein_coding
description:
  Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: bxe:Bxe_B0497 histidine kinase.


ensembl_gene_id: Bphy_3958
symbol: Bphy_3958
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bxe:Bxe_B0496 two component transcriptional regulator, winged helix family.


ensembl_gene_id: Bphy_3959
symbol: Bphy_3959
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_B0495 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein.


ensembl_gene_id: Bphy_3960
symbol: Bphy_3960
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B0494 ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit.


ensembl_gene_id: Bphy_3961
symbol: Bphy_3961
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B0493 ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit.


ensembl_gene_id: Bphy_3962
symbol: Bphy_3962
gene_biotype: protein_coding
description:
  TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bxe:Bxe_B1389 two component heavy metal response transcriptional regulator, winged helix family.


ensembl_gene_id: Bphy_3963
symbol: Bphy_3963
gene_biotype: protein_coding
description:
  Heavy metal sensor signal transduction histidine kinase; Member of a two-component regulatory system.


ensembl_gene_id: Bphy_3964
symbol: Bphy_3964
gene_biotype: protein_coding
description:
  Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_A3457 putative signal transduction histidine kinase.


ensembl_gene_id: Bphy_3965
symbol: Bphy_3965
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bxe:Bxe_A3456 two component transcriptional regulator, winged helix family.


ensembl_gene_id: Bphy_3966
symbol: fur-3
gene_biotype: protein_coding
description:
  Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: bvi:Bcep1808_0617 ferric uptake regulator, Fur family; Belongs to the Fur family.


ensembl_gene_id: Bphy_3968
symbol: Bphy_3968
gene_biotype: protein_coding
description:
  TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; COX aromatic rich domain protein; KEGG: bxe:Bxe_B1637 cytochrome o ubiquinol oxidase subunit II.


ensembl_gene_id: Bphy_3969
symbol: Bphy_3969
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_B1636 cytochrome-c oxidase; TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: Bphy_3970
symbol: Bphy_3970
gene_biotype: protein_coding
description:
  TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: bxe:Bxe_B1635 CyoC.


ensembl_gene_id: Bphy_3971
symbol: Bphy_3971
gene_biotype: protein_coding
description:
  TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: bxe:Bxe_B1634 CyoD.


ensembl_gene_id: Bphy_3973
symbol: Bphy_3973
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_B1638 proton-translocating NADH-quinoneoxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I).


ensembl_gene_id: Bphy_3974
symbol: Bphy_3974
gene_biotype: protein_coding
description:
  KEGG: pmy:Pmen_1361 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein.


ensembl_gene_id: Bphy_3975
symbol: Bphy_3975
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pmy:Pmen_1365 binding-protein-dependent transport systems inner membrane component.


ensembl_gene_id: Bphy_3976
symbol: Bphy_3976
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: psa:PST_2010 ABC transporter, ATP-binding protein.


ensembl_gene_id: Bphy_3979
symbol: Bphy_3979
gene_biotype: protein_coding
description:
  TIGRFAM: urea amidolyase related protein; urea carboxylase; PFAM: biotin/lipoyl attachment domain-containing protein; Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: pmy:Pmen_1358 biotin carboxylation domain protein.


ensembl_gene_id: Bphy_3981
symbol: Bphy_3981
gene_biotype: protein_coding
description:
  PFAM: Antibiotic biosynthesis monooxygenase; KEGG: reu:Reut_B4489 antibiotic biosynthesis monooxygenase.


ensembl_gene_id: Bphy_3982
symbol: Bphy_3982
gene_biotype: protein_coding
description:
  PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B2139 putative short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Bphy_3987
symbol: Bphy_3987
gene_biotype: protein_coding
description:
  PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bxe:Bxe_B1017 protein tyrosine phosphatase.


ensembl_gene_id: Bphy_3988
symbol: Bphy_3988
gene_biotype: protein_coding
description:
  PFAM: peptidylprolyl isomerase FKBP-type; KEGG: bxe:Bxe_B0780 putative FKBP-type peptidyl-prolyl cis-transisomerase signal peptide protein.


ensembl_gene_id: Bphy_3992
symbol: Bphy_3992
gene_biotype: protein_coding
description:
  PFAM: response regulator receiver; KEGG: bxe:Bxe_B0320 response regulator receiver domain protein(CheY).


ensembl_gene_id: Bphy_3995
symbol: Bphy_3995
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rpd:RPD_0457 LysR, substrate-binding; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: Bphy_4001
symbol: Bphy_4001
gene_biotype: protein_coding
description:
  PFAM: Catalase domain protein; KEGG: rme:Rmet_5599 catalase-like protein; Belongs to the catalase family.


ensembl_gene_id: Bphy_4003
symbol: ddpX
gene_biotype: protein_coding
description:
  Peptidase M15D vanX D-ala-D-ala dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.


ensembl_gene_id: Bphy_4004
symbol: Bphy_4004
gene_biotype: protein_coding
description:
  PFAM: extracellular solute-binding protein family 5; KEGG: bxe:Bxe_C0197 ABC peptide/opine/nickel family transporter, periplasmic ligand binding protein.


ensembl_gene_id: Bphy_4005
symbol: Bphy_4005
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_C0196 ABC peptide/opine/nickel family transporter, inner membrane subunit.


ensembl_gene_id: Bphy_4006
symbol: Bphy_4006
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_C0195 ABC peptide/opine/nickel family transporter, inner membrane subunit.


ensembl_gene_id: Bphy_4007
symbol: Bphy_4007
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_C0194 ABC peptide/opine/nickel family transporter, ATPase subunit.


ensembl_gene_id: Bphy_4008
symbol: Bphy_4008
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_C0193 ABC peptide/opine/nickel family transporter, ATPase subunit.


ensembl_gene_id: Bphy_4009
symbol: Bphy_4009
gene_biotype: protein_coding
description:
  PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rme:Rmet_4011 major facilitator superfamily MFS_1.


ensembl_gene_id: Bphy_4011
symbol: Bphy_4011
gene_biotype: protein_coding
description:
  PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: ppf:Pput_2605 fumarate reductase/succinate dehydrogenase flavoprotein domain protein.


ensembl_gene_id: Bphy_4012
symbol: Bphy_4012
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ppf:Pput_2606 short-chain dehydrogenase/reductase SDR.


ensembl_gene_id: Bphy_4013
symbol: Bphy_4013
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: pna:Pnap_2708 transcriptional regulator, AraC family.


ensembl_gene_id: Bphy_4014
symbol: Bphy_4014
gene_biotype: protein_coding
description:
  4-hydroxybenzoate 3-monooxygenase; PFAM: monooxygenase FAD-binding; KEGG: bxe:Bxe_A2040 4-hydroxybenzoate 3-monooxygenase (PobB).


ensembl_gene_id: Bphy_4016
symbol: Bphy_4016
gene_biotype: protein_coding
description:
  PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bxe:Bxe_B2616 putative isoquinoline 1-oxidoreductase, alpha subunit.


ensembl_gene_id: Bphy_4017
symbol: Bphy_4017
gene_biotype: protein_coding
description:
  PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bxe:Bxe_B2617 putative isoquinoline 1-oxidoreductase, beta subunit.


ensembl_gene_id: Bphy_4018
symbol: Bphy_4018
gene_biotype: protein_coding
description:
  PFAM: virulence factor family protein; KEGG: bxe:Bxe_A2034 putative virulence protein, type IV secretion protein VirJ-like.


ensembl_gene_id: Bphy_4019
symbol: Bphy_4019
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF470; protein of unknown function DUF471; protein of unknown function DUF472; KEGG: bxe:Bxe_A2033 conserved transmembrane protein, LpiA-like.


ensembl_gene_id: Bphy_4020
symbol: Bphy_4020
gene_biotype: protein_coding
description:
  TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_5791 drug resistance transporter, EmrB/QacA subfamily.


ensembl_gene_id: Bphy_4022
symbol: Bphy_4022
gene_biotype: protein_coding
description:
  TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: reu:Reut_C6204 RND efflux system, outer membrane lipoprotein, NodT.


ensembl_gene_id: Bphy_4024
symbol: Bphy_4024
gene_biotype: protein_coding
description:
  Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; KEGG: bur:Bcep18194_A4687 hypothetical protein.


ensembl_gene_id: Bphy_4025
symbol: Bphy_4025
gene_biotype: protein_coding
description:
  Transcriptional regulator, NifA subfamily, Fis Family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B2332 transcriptional regulator, NifA subfamily, fis family.


ensembl_gene_id: Bphy_4026
symbol: hmp
gene_biotype: protein_coding
description:
  Oxidoreductase FAD-binding domain protein; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily.


ensembl_gene_id: Bphy_4027
symbol: Bphy_4027
gene_biotype: protein_coding
description:
  KEGG: pfl:PFL_3861 muconolactone delta-isomerase; TIGRFAM: muconolactone delta-isomerase; PFAM: Muconolactone delta-isomerase.


ensembl_gene_id: Bphy_4028
symbol: Bphy_4028
gene_biotype: protein_coding
description:
  TIGRFAM: catechol 1,2-dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: bxe:Bxe_A2109 catechol 1,2-dioxygenase (CatA).


ensembl_gene_id: Bphy_4029
symbol: Bphy_4029
gene_biotype: protein_coding
description:
  TIGRFAM: muconate and chloromuconate cycloisomerase; PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bxe:Bxe_A2108 muconate cycloisomerase.


ensembl_gene_id: Bphy_4030
symbol: Bphy_4030
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A2107 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_4032
symbol: Bphy_4032
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_3341 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_4033
symbol: Bphy_4033
gene_biotype: protein_coding
description:
  PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: rxy:Rxyl_2834 NCS1 nucleoside transporter family.


ensembl_gene_id: Bphy_4038
symbol: Bphy_4038
gene_biotype: protein_coding
description:
  TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: bpm:BURPS1710b_2088 pyoverdine synthetase D.


ensembl_gene_id: Bphy_4039
symbol: Bphy_4039
gene_biotype: protein_coding
description:
  TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: bxe:Bxe_B0525 non-ribosomal peptide synthase.


ensembl_gene_id: Bphy_4040
symbol: Bphy_4040
gene_biotype: protein_coding
description:
  KEGG: bte:BTH_I2419 cyclic peptide ABC transporter, ATP-binding protein; TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; SMART: AAA ATPase.


ensembl_gene_id: Bphy_4043
symbol: Bphy_4043
gene_biotype: protein_coding
description:
  PFAM: transport system permease protein; KEGG: bxe:Bxe_B0521 ABC Fe3+-siderophore transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: Bphy_4044
symbol: Bphy_4044
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B0520 ABC cobalamin/Fe3+-siderophores transporter, ATPase subunit.


ensembl_gene_id: Bphy_4045
symbol: Bphy_4045
gene_biotype: protein_coding
description:
  PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: bvi:Bcep1808_1579 taurine catabolism dioxygenase TauD/TfdA.


ensembl_gene_id: Bphy_4047
symbol: Bphy_4047
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bam:Bamb_1529 RNA polymerase, sigma-24 subunit, ECF subfamily.


ensembl_gene_id: Bphy_4048
symbol: Bphy_4048
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B0430 major facilitator superfamily (MFS) metabolite/H+ symporter.


ensembl_gene_id: Bphy_4050
symbol: Bphy_4050
gene_biotype: protein_coding
description:
  PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: bxe:Bxe_B0428 putative monooxygenase.


ensembl_gene_id: Bphy_4052
symbol: Bphy_4052
gene_biotype: protein_coding
description:
  PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bxe:Bxe_B0426 transcriptional regulator, IclR family.


ensembl_gene_id: Bphy_4053
symbol: Bphy_4053
gene_biotype: protein_coding
description:
  PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bxe:Bxe_B0425 transcriptional regulator, IclR family.


ensembl_gene_id: Bphy_4054
symbol: Bphy_4054
gene_biotype: protein_coding
description:
  Transcriptional regulator, RpiR family; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bxe:Bxe_B0423 transcriptional regulator, RpiR family.


ensembl_gene_id: Bphy_4055
symbol: Bphy_4055
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B0422 ABC sugar transporter, ATPase subunit.


ensembl_gene_id: Bphy_4056
symbol: Bphy_4056
gene_biotype: protein_coding
description:
  PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; KR domain protein; KEGG: bxe:Bxe_B0421 putative short-chain dehydrogenase, oxidoreductase.


ensembl_gene_id: Bphy_4057
symbol: Bphy_4057
gene_biotype: protein_coding
description:
  PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_B0420 ABC sugar transporter, periplasmic ligand binding protein.


ensembl_gene_id: Bphy_4058
symbol: Bphy_4058
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B0419 ABC sugar transporter, inner membrane subunit.


ensembl_gene_id: Bphy_4059
symbol: Bphy_4059
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B0418 ABC sugar transporter, inner membrane subunit.


ensembl_gene_id: Bphy_4061
symbol: Bphy_4061
gene_biotype: protein_coding
description:
  Carboxymethylenebutenolidase; PFAM: dienelactone hydrolase; KEGG: bam:Bamb_5994 carboxymethylenebutenolidase.


ensembl_gene_id: Bphy_4063
symbol: Bphy_4063
gene_biotype: protein_coding
description:
  Methyltransferase type 11; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: reu:Reut_B4254 UbiE/COQ5 methyltransferase.


ensembl_gene_id: Bphy_4064
symbol: Bphy_4064
gene_biotype: protein_coding
description:
  Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bvi:Bcep1808_7225 integral membrane sensor signal transduction histidine kinase.


ensembl_gene_id: Bphy_4065
symbol: Bphy_4065
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bcn:Bcen_0881 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_4066
symbol: Bphy_4066
gene_biotype: protein_coding
description:
  PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bch:Bcen2424_1364 glyoxalase/bleomycin resistance protein/dioxygenase.


ensembl_gene_id: Bphy_4068
symbol: Bphy_4068
gene_biotype: protein_coding
description:
  PFAM: NADH:flavin oxidoreductase/NADH oxidase; monooxygenase FAD-binding; KEGG: bxe:Bxe_B0282 putative 2-amninobenzoyl-CoA monooxygenase/reductase.


ensembl_gene_id: Bphy_4069
symbol: Bphy_4069
gene_biotype: protein_coding
description:
  PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B0281 putative short-chain dehydrogenase, oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Bphy_4071
symbol: Bphy_4071
gene_biotype: protein_coding
description:
  PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bxe:Bxe_B0279 putative enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Bphy_4072
symbol: Bphy_4072
gene_biotype: protein_coding
description:
  PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_B0278 putative acyl-CoA dehydrogenase.


ensembl_gene_id: Bphy_4073
symbol: Bphy_4073
gene_biotype: protein_coding
description:
  PFAM: thioesterase superfamily protein; KEGG: bxe:Bxe_B0277 putative 4-hydroxybenzoyl CoA thioesterase.


ensembl_gene_id: Bphy_4076
symbol: Bphy_4076
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B0272 major facilitator superfamily (MFS) multidrug efflux pump, EmrB/QacA subfamily.


ensembl_gene_id: Bphy_4077
symbol: Bphy_4077
gene_biotype: protein_coding
description:
  PFAM: transcription activator effector binding; KEGG: bxe:Bxe_B0261 transcriptional regulator, AraC family.


ensembl_gene_id: Bphy_4081
symbol: Bphy_4081
gene_biotype: protein_coding
description:
  PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_B0245 putative acetyltransferase, GnaT family.


ensembl_gene_id: Bphy_4082
symbol: Bphy_4082
gene_biotype: protein_coding
description:
  PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_B0244 putative acetyltransferase, GnaT family.


ensembl_gene_id: Bphy_4083
symbol: Bphy_4083
gene_biotype: protein_coding
description:
  PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: bxe:Bxe_A3278 putative 3-demethylubiquinone-93-methyltransferase protein.


ensembl_gene_id: Bphy_4084
symbol: Bphy_4084
gene_biotype: protein_coding
description:
  PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rfr:Rfer_4026 glyoxalase/bleomycin resistance protein/dioxygenase.


ensembl_gene_id: Bphy_4090
symbol: Bphy_4090
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bxe:Bxe_B1629 sigma-24 (FecI); Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: Bphy_4092
symbol: Bphy_4092
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; PFAM: AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_B0240 transcriptional regulator, AraC family.


ensembl_gene_id: Bphy_4095
symbol: Bphy_4095
gene_biotype: protein_coding
description:
  PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bxe:Bxe_B0239 putative zinc-containing alcohol dehydrogenase.


ensembl_gene_id: Bphy_4097
symbol: Bphy_4097
gene_biotype: protein_coding
description:
  Putative RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: bxe:Bxe_B0234 unknown sigma factor.


ensembl_gene_id: Bphy_4098
symbol: Bphy_4098
gene_biotype: protein_coding
description:
  PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_B0233 putative glyoxalase/bleomycin resistance protein/dioxygenase.


ensembl_gene_id: Bphy_4112
symbol: Bphy_4112
gene_biotype: protein_coding
description:
  PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bmn:BMA10247_A1480 transcriptional regulator, GntR family.


ensembl_gene_id: Bphy_4126
symbol: Bphy_4126
gene_biotype: protein_coding
description:
  TIGRFAM: hopanoid-associated sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; Male sterility domain; KEGG: bxe:Bxe_B0022 hypothetical protein.


ensembl_gene_id: Bphy_4129
symbol: Bphy_4129
gene_biotype: protein_coding
description:
  TIGRFAM: hopene-associated glycosyltransferase HpnB; PFAM: glycosyl transferase family 2; KEGG: bxe:Bxe_B0020 glycosyl transferase, group 2 family.


ensembl_gene_id: Bphy_4131
symbol: Bphy_4131
gene_biotype: protein_coding
description:
  TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: Radical SAM domain protein; KEGG: bxe:Bxe_B0017 MoaA/NifB/PqqE family protein.


ensembl_gene_id: Bphy_4132
symbol: Bphy_4132
gene_biotype: protein_coding
description:
  PFAM: toluene tolerance family protein; KEGG: bxe:Bxe_B0016 putative ABC transporter, periplasmic ligand binding protein.


ensembl_gene_id: Bphy_4133
symbol: Bphy_4133
gene_biotype: protein_coding
description:
  TIGRFAM: hopanoid biosynthesis associated RND transporter like protein HpnN; KEGG: bxe:Bxe_B0015 hypothetical protein.


ensembl_gene_id: Bphy_4135
symbol: Bphy_4135
gene_biotype: protein_coding
description:
  PFAM: thioesterase superfamily protein; KEGG: pst:PSPTO_5067 4-hydroxybenzoyl-CoA thioesterase domain protein.


ensembl_gene_id: Bphy_4137
symbol: Bphy_4137
gene_biotype: protein_coding
description:
  Squalene-hopene cyclase; KEGG: bxe:Bxe_B0012 terpene synthase; TIGRFAM: squalene/oxidosqualene cyclase; squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase.


ensembl_gene_id: Bphy_4138
symbol: Bphy_4138
gene_biotype: protein_coding
description:
  TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: bxe:Bxe_B0011 hypothetical protein.


ensembl_gene_id: Bphy_4139
symbol: Bphy_4139
gene_biotype: protein_coding
description:
  TIGRFAM: squalene synthase HpnD; PFAM: Squalene/phytoene synthase; KEGG: bxe:Bxe_B0010 putative squalene/phytoene synthase.


ensembl_gene_id: Bphy_4141
symbol: Bphy_4141
gene_biotype: protein_coding
description:
  Diguanylate cyclase with PAS/PAC sensor; KEGG: bxe:Bxe_B0009 putative diguanylate cyclase (GGDEF domain); TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: PAS domain containing protein.


ensembl_gene_id: Bphy_4143
symbol: Bphy_4143
gene_biotype: protein_coding
description:
  PFAM: response regulator receiver; KEGG: bxe:Bxe_B0007 response regulator receiver domain protein(CheY).


ensembl_gene_id: Bphy_4144
symbol: Bphy_4144
gene_biotype: protein_coding
description:
  Integral membrane sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_B0006 periplasmic sensor hybrid histidine kinase.


ensembl_gene_id: Bphy_4149
symbol: Bphy_4149
gene_biotype: protein_coding
description:
  TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: bxe:Bxe_B3031 ABC aliphatic sulfonates transporter, periplasmic ligand binding protein.


ensembl_gene_id: Bphy_4150
symbol: Bphy_4150
gene_biotype: protein_coding
description:
  TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: bxe:Bxe_B3030 arsenate reductase.


ensembl_gene_id: Bphy_4152
symbol: Bphy_4152
gene_biotype: protein_coding
description:
  TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: bxe:Bxe_B3027 ParB-like partition protein; Belongs to the ParB family.


ensembl_gene_id: Bphy_4158
symbol: Bphy_4158
gene_biotype: protein_coding
description:
  Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: bxe:Bxe_B3022 transcriptional regulator, XRE family.


ensembl_gene_id: Bphy_4159
symbol: kbl
gene_biotype: protein_coding
description:
  2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.


ensembl_gene_id: Bphy_4160
symbol: tdh
gene_biotype: protein_coding
description:
  L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family.


ensembl_gene_id: Bphy_4161
symbol: Bphy_4161
gene_biotype: protein_coding
description:
  PFAM: YceI family protein; KEGG: bxe:Bxe_B3019 putative YceI like family protein; Belongs to the UPF0312 family.


ensembl_gene_id: Bphy_4163
symbol: Bphy_4163
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF1348; KEGG: bte:BTH_II0011 protein of unknown function (DUF1348) superfamily.


ensembl_gene_id: Bphy_4165
symbol: Bphy_4165
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reu:Reut_C6115 regulatory protein, LysR:LysR, substrate-binding; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: Bphy_4166
symbol: Bphy_4166
gene_biotype: protein_coding
description:
  PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: reu:Reut_C6116 zinc-containing alcohol dehydrogenase superfamily.


ensembl_gene_id: Bphy_4167
symbol: Bphy_4167
gene_biotype: protein_coding
description:
  GAF sensor hybrid histidine kinase; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_B2013 GAF sensor hybrid histidine kinase.


ensembl_gene_id: Bphy_4172
symbol: Bphy_4172
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpt:Mpe_A0908 oxidoreductase, short-chain dehydrogenase/reductase family.


ensembl_gene_id: Bphy_4173
symbol: Bphy_4173
gene_biotype: protein_coding
description:
  PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: bxe:Bxe_C0261 putative radical SAM domain/B12 binding domain protein.


ensembl_gene_id: Bphy_4174
symbol: Bphy_4174
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B1339 major facilitator superfamily (MFS) sugar efflux pump.


ensembl_gene_id: Bphy_4176
symbol: Bphy_4176
gene_biotype: protein_coding
description:
  PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: bur:Bcep18194_C7092 peptidase U61, LD-carboxypeptidase A.


ensembl_gene_id: Bphy_4180
symbol: Bphy_4180
gene_biotype: protein_coding
description:
  Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; KEGG: bte:BTH_I1428 DNA-binding protein.


ensembl_gene_id: Bphy_4186
symbol: Bphy_4186
gene_biotype: protein_coding
description:
  PFAM: CMP/dCMP deaminase zinc-binding; KEGG: bxe:Bxe_A1491 putative cytidine/deoxycytidylate deaminase family protein.


ensembl_gene_id: Bphy_4187
symbol: Bphy_4187
gene_biotype: protein_coding
description:
  PFAM: basic membrane lipoprotein; KEGG: bxe:Bxe_A1490 ABC transporter, periplasmic ligand binding protein.


ensembl_gene_id: Bphy_4191
symbol: Bphy_4191
gene_biotype: protein_coding
description:
  TIGRFAM: 4-hydroxyphenylacetate transporter; PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_0632 4-hydroxyphenylacetate transporter.


ensembl_gene_id: Bphy_4192
symbol: Bphy_4192
gene_biotype: protein_coding
description:
  PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; tryptophan halogenase; KEGG: bxe:Bxe_A2727 putative 3-(3-hydroxy-phenyl)propionate hydroxylase (MhpA).


ensembl_gene_id: Bphy_4194
symbol: Bphy_4194
gene_biotype: protein_coding
description:
  Transcriptional regulator, MarR family; TIGRFAM: homoprotocatechuate degradation operon regulator, HpaR; PFAM: regulatory protein MarR; KEGG: bxe:Bxe_B2027 homoprotocatechuate degradative operon transcriptional repressor, MarR family (HpaR).


ensembl_gene_id: Bphy_4195
symbol: Bphy_4195
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B0600 transcriptional regulator, AraC family.


ensembl_gene_id: Bphy_4196
symbol: Bphy_4196
gene_biotype: protein_coding
description:
  PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: bxe:Bxe_B3003 metal dependent phosphohydrolase, HD region.


ensembl_gene_id: Bphy_4197
symbol: Bphy_4197
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B0207 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_4198
symbol: Bphy_4198
gene_biotype: protein_coding
description:
  PFAM: extracellular solute-binding protein family 3; KEGG: bxe:Bxe_B0208 ABC basic amino acid family transporter, periplasmic ligand binding protein; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: Bphy_4199
symbol: Bphy_4199
gene_biotype: protein_coding
description:
  PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: bxe:Bxe_B0209 putative arginine/ornithine transport operon(AotO) protein.


ensembl_gene_id: Bphy_4200
symbol: Bphy_4200
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reh:H16_B1790 short-chain dehydrogenase of various substrate specificities; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Bphy_4201
symbol: Bphy_4201
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: reh:H16_B1789 transcriptional regulator, AraC-family.


ensembl_gene_id: Bphy_4207
symbol: Bphy_4207
gene_biotype: protein_coding
description:
  PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_B1219 response regulator receiver sensor signal transduction histidine kinase.


ensembl_gene_id: Bphy_4210
symbol: Bphy_4210
gene_biotype: protein_coding
description:
  Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE3 domain protein; KEGG: bxe:Bxe_B1216 multi-sensor hybrid histidine kinase.


ensembl_gene_id: Bphy_4214
symbol: Bphy_4214
gene_biotype: protein_coding
description:
  PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: psp:PSPPH_3577 transcriptional regulator, GntR family.


ensembl_gene_id: Bphy_4215
symbol: Bphy_4215
gene_biotype: protein_coding
description:
  PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: pna:Pnap_2666 dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.


ensembl_gene_id: Bphy_4216
symbol: Bphy_4216
gene_biotype: protein_coding
description:
  Galactose 1-dehydrogenase; PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bch:Bcen2424_5642 galactose 1-dehydrogenase.


ensembl_gene_id: Bphy_4217
symbol: Bphy_4217
gene_biotype: protein_coding
description:
  Monosaccharide-transporting ATPase; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bte:BTH_II1628 L-arabinose ABC transporter, periplasmic L-arabinose-binding protein.


ensembl_gene_id: Bphy_4219
symbol: Bphy_4219
gene_biotype: protein_coding
description:
  Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bur:Bcep18194_B0047 ABC sugar transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Bphy_4223
symbol: Bphy_4223
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_A0838 ABC peptide transporter, inner membrane subunit.


ensembl_gene_id: Bphy_4224
symbol: Bphy_4224
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B1866 ABC dipeptide/oligopeptide/nickel family transporter, inner membrane subunit.


ensembl_gene_id: Bphy_4225
symbol: Bphy_4225
gene_biotype: protein_coding
description:
  PFAM: extracellular solute-binding protein family 5; KEGG: bxe:Bxe_A0836 ABC peptide transporter, periplasmic ligand binding protein.


ensembl_gene_id: Bphy_4226
symbol: Bphy_4226
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_A0835 ABC oligopeptide/dipeptide transporter, duplicated ATPase subunits; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.


ensembl_gene_id: Bphy_4228
symbol: Bphy_4228
gene_biotype: protein_coding
description:
  Transcriptional regulator, RpiR family; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bxe:Bxe_A0833 transcriptional regulator, RpiR family.


ensembl_gene_id: Bphy_4229
symbol: Bphy_4229
gene_biotype: protein_coding
description:
  PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bxe:Bxe_B0171 transcriptional regulator, IclR family.


ensembl_gene_id: Bphy_4233
symbol: Bphy_4233
gene_biotype: protein_coding
description:
  PFAM: Rieske [2Fe-2S] domain protein; KEGG: bxe:Bxe_B0175 iron-sulfur cluster-binding protein, rieske family.


ensembl_gene_id: Bphy_4234
symbol: Bphy_4234
gene_biotype: protein_coding
description:
  PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B0176 putative short chain dehydrogenase.


ensembl_gene_id: Bphy_4237
symbol: Bphy_4237
gene_biotype: protein_coding
description:
  PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bxe:Bxe_B0179 transcriptional regulator, IclR family.


ensembl_gene_id: Bphy_4238
symbol: Bphy_4238
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B0180 putative short chain dehydrogenase.


ensembl_gene_id: Bphy_4239
symbol: Bphy_4239
gene_biotype: protein_coding
description:
  PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bxe:Bxe_B0181 putative thiamine pyrophosphate enzyme; Belongs to the TPP enzyme family.


ensembl_gene_id: Bphy_4240
symbol: nadX
gene_biotype: protein_coding
description:
  Aspartate dehydrogenase; Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate.


ensembl_gene_id: Bphy_4241
symbol: Bphy_4241
gene_biotype: protein_coding
description:
  PFAM: Aldehyde Dehydrogenase; KEGG: bxe:Bxe_B0183 betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: Bphy_4242
symbol: Bphy_4242
gene_biotype: protein_coding
description:
  PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_B0184 glyoxalase family protein.


ensembl_gene_id: Bphy_4243
symbol: Bphy_4243
gene_biotype: protein_coding
description:
  PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_B0185 pyridine nucleotide-disulfide oxidoreductase, class I.


ensembl_gene_id: Bphy_4244
symbol: Bphy_4244
gene_biotype: protein_coding
description:
  PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B0186 major facilitator superfamily (MFS) transporter.


ensembl_gene_id: Bphy_4245
symbol: Bphy_4245
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_B3005 putative short-chain dehydrogenase.


ensembl_gene_id: Bphy_4246
symbol: Bphy_4246
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bxe:Bxe_B3004 transcriptional regulator, AraC family.


ensembl_gene_id: Bphy_4248
symbol: Bphy_4248
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfo:Pfl_1313 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_4249
symbol: Bphy_4249
gene_biotype: protein_coding
description:
  PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: pfo:Pfl_1314 L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.


ensembl_gene_id: Bphy_4252
symbol: Bphy_4252
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bxe:Bxe_B3002 transcriptional regulator, GntR family.


ensembl_gene_id: Bphy_4253
symbol: Bphy_4253
gene_biotype: protein_coding
description:
  Serine--glyoxylate transaminase; PFAM: aminotransferase class V; KEGG: bxe:Bxe_B3001 serine--glyoxylate transaminase.


ensembl_gene_id: Bphy_4254
symbol: Bphy_4254
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B3023 major facilitator superfamily (MFS_1) transporter.


ensembl_gene_id: Bphy_4256
symbol: Bphy_4256
gene_biotype: protein_coding
description:
  D-lactate dehydrogenase (cytochrome); PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: bur:Bcep18194_B3025 D-lactate dehydrogenase (cytochrome).


ensembl_gene_id: Bphy_4258
symbol: Bphy_4258
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_A3921 transcriptional regulator, AraC family.


ensembl_gene_id: Bphy_4259
symbol: Bphy_4259
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF6 transmembrane; KEGG: bcn:Bcen_0346 protein of unknown function DUF6, transmembrane.


ensembl_gene_id: Bphy_4262
symbol: Bphy_4262
gene_biotype: protein_coding
description:
  PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bxe:Bxe_B2990 amino acid efflux pump, RhtB family, LysE superfamily.


ensembl_gene_id: Bphy_4265
symbol: Bphy_4265
gene_biotype: protein_coding
description:
  PFAM: cyclic nucleotide-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: bxe:Bxe_B2987 cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase.


ensembl_gene_id: Bphy_4268
symbol: Bphy_4268
gene_biotype: protein_coding
description:
  methylated-DNA--protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: Bphy_4269
symbol: Bphy_4269
gene_biotype: protein_coding
description:
  TIGRFAM: PAS sensor protein; PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; KEGG: bxe:Bxe_B2984 methyl-accepting chemotaxis sensory transducer, PAS/Pac sensor.


ensembl_gene_id: Bphy_4270
symbol: Bphy_4270
gene_biotype: protein_coding
description:
  Histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_B2983 periplasmic sensor hybrid histidine kinase.


ensembl_gene_id: Bphy_4272
symbol: Bphy_4272
gene_biotype: protein_coding
description:
  Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: pca:Pcar_2558 signal transduction protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.


ensembl_gene_id: Bphy_4279
symbol: Bphy_4279
gene_biotype: protein_coding
description:
  PAS modulated sigma54 specific transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; PAS fold-4 domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B2979 sigma54 specific transcriptional regulator containing PAS, fis family.


ensembl_gene_id: Bphy_4285
symbol: Bphy_4285
gene_biotype: protein_coding
description:
  PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bxe:Bxe_B2975 putative H-NS-like transcription regulator.


ensembl_gene_id: Bphy_4287
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: Bphy_4289
symbol: Bphy_4289
gene_biotype: protein_coding
description:
  PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: bxe:Bxe_B2967 putative acetyltransferase, GNAT family.


ensembl_gene_id: Bphy_4291
symbol: Bphy_4291
gene_biotype: protein_coding
description:
  TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: Haemagluttinin repeat-containing protein; filamentous haemagglutinin domain protein; KEGG: bxe:Bxe_A3647 filamentous haemagglutinin.


ensembl_gene_id: Bphy_4292
symbol: Bphy_4292
gene_biotype: protein_coding
description:
  PFAM: Hemolysin activator HlyB domain protein; Polypeptide-transport-associated domain protein ShlB-type; KEGG: bxe:Bxe_A3644 putative activator/secretion protein.


ensembl_gene_id: Bphy_4294
symbol: Bphy_4294
gene_biotype: protein_coding
description:
  5-carboxymethyl-2-hydroxymuconate Delta-isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bxe:Bxe_B2956 fumarylacetoacetate hydrolase family protein.


ensembl_gene_id: Bphy_4295
symbol: Bphy_4295
gene_biotype: protein_coding
description:
  PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_B2957 putative short-chain dehydrogenase/reductase.


ensembl_gene_id: Bphy_4297
symbol: Bphy_4297
gene_biotype: protein_coding
description:
  Pyridoxal 4-dehydrogenase; PFAM: aldo/keto reductase; KEGG: bxe:Bxe_B2959 putative aldo/keto reductase family protein.


ensembl_gene_id: Bphy_4298
symbol: Bphy_4298
gene_biotype: protein_coding
description:
  PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; KEGG: bxe:Bxe_B2960 altronate dehydratase.


ensembl_gene_id: Bphy_4300
symbol: Bphy_4300
gene_biotype: protein_coding
description:
  Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B2962 ABC sugar transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Bphy_4301
symbol: Bphy_4301
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B2963 ABC sugar transporter, ATPase subunit.


ensembl_gene_id: Bphy_4302
symbol: Bphy_4302
gene_biotype: protein_coding
description:
  PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bxe:Bxe_B2964 ABC sugar transporter, periplasmic ligand binding protein.


ensembl_gene_id: Bphy_4303
symbol: Bphy_4303
gene_biotype: protein_coding
description:
  PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bxe:Bxe_B2965 transcriptional regulator, IclR family.


ensembl_gene_id: Bphy_4305
symbol: Bphy_4305
gene_biotype: protein_coding
description:
  Methyl-accepting chemotaxis sensory transducer; PFAM: ligand binding Tar domain protein; histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bxe:Bxe_B2952 methyl-accepting chemotaxis sensory transducer.


ensembl_gene_id: Bphy_4313
symbol: Bphy_4313
gene_biotype: protein_coding
description:
  TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: bxe:Bxe_B2941 polyhydroxyalkanoate depolymerase.


ensembl_gene_id: Bphy_4315
symbol: Bphy_4315
gene_biotype: protein_coding
description:
  PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bxe:Bxe_B2939 methyl-accepting chemotaxis sensory transducer.


ensembl_gene_id: Bphy_4316
symbol: Bphy_4316
gene_biotype: protein_coding
description:
  Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: bvi:Bcep1808_3665 heavy metal translocating P-type ATPase.


ensembl_gene_id: Bphy_4317
symbol: Bphy_4317
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: bxe:Bxe_B2936 putative lipoprotein.


ensembl_gene_id: Bphy_4320
symbol: Bphy_4320
gene_biotype: protein_coding
description:
  PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bxe:Bxe_B2934 transcriptional regulator, GntR family.


ensembl_gene_id: Bphy_4322
symbol: Bphy_4322
gene_biotype: protein_coding
description:
  PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_B2932 ABC spermidine/putrescine family transporter, periplasmic ligand binding protein.


ensembl_gene_id: Bphy_4323
symbol: Bphy_4323
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B2931 ABC spermidine/putrescine family transporter, inner membrane subunit.


ensembl_gene_id: Bphy_4324
symbol: Bphy_4324
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B2930 ABC spermidine/putrescine family transporter, inner membrane subunit.


ensembl_gene_id: Bphy_4326
symbol: Bphy_4326
gene_biotype: protein_coding
description:
  TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_B1747 RND efflux system, outer membrane lipoprotein, NodT family.


ensembl_gene_id: Bphy_4328
symbol: Bphy_4328
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc0164 probable ATP-binding ABC transporter protein.


ensembl_gene_id: Bphy_4329
symbol: Bphy_4329
gene_biotype: protein_coding
description:
  PFAM: secretion protein HlyD family protein; KEGG: bam:Bamb_3691 secretion protein HlyD family protein.


ensembl_gene_id: Bphy_4331
symbol: Bphy_4331
gene_biotype: protein_coding
description:
  PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bxe:Bxe_B2928 two component transcriptional regulator, LuxR family.


ensembl_gene_id: Bphy_4333
symbol: Bphy_4333
gene_biotype: protein_coding
description:
  PFAM: response regulator receiver; Hpt domain protein; KEGG: bte:BTH_I2675 sensor histidine kinase/response regulator.


ensembl_gene_id: Bphy_4334
symbol: Bphy_4334
gene_biotype: protein_coding
description:
  PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bxe:Bxe_B2906 two component transcriptional regulator, LuxR family.


ensembl_gene_id: Bphy_4344
symbol: Bphy_4344
gene_biotype: protein_coding
description:
  TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: bxe:Bxe_B2919 putative Flp pilus assembly CpaB.


ensembl_gene_id: Bphy_4345
symbol: Bphy_4345
gene_biotype: protein_coding
description:
  PFAM: type II and III secretion system protein; KEGG: bxe:Bxe_B2920 putative type II and III secretion system outermembrane protein, secretin; Belongs to the bacterial secretin family.


ensembl_gene_id: Bphy_4346
symbol: Bphy_4346
gene_biotype: protein_coding
description:
  FHA domain containing protein; PFAM: Forkhead-associated protein; type II secretion system protein E; KEGG: reh:H16_A0983 flp pilus assembly ATPase CpaF.


ensembl_gene_id: Bphy_4347
symbol: Bphy_4347
gene_biotype: protein_coding
description:
  PFAM: type II secretion system protein; KEGG: bxe:Bxe_B2922 putative type II secretion system protein F.


ensembl_gene_id: Bphy_4348
symbol: Bphy_4348
gene_biotype: protein_coding
description:
  PFAM: type II secretion system protein; KEGG: bxe:Bxe_B2923 putative type II secretion system protein F.


ensembl_gene_id: Bphy_4353
symbol: Bphy_4353
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_B2902 2-methylcitrate dehydratase; TIGRFAM: 2-methylcitrate dehydratase; PFAM: MmgE/PrpD family protein.


ensembl_gene_id: Bphy_4355
symbol: Bphy_4355
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_B2900 2-methylcitrate synthase/citrate synthase II; TIGRFAM: 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase; Belongs to the citrate synthase family.


ensembl_gene_id: Bphy_4356
symbol: prpB
gene_biotype: protein_coding
description:
  Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.


ensembl_gene_id: Bphy_4358
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.


ensembl_gene_id: Bphy_4360
symbol: Bphy_4360
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bxe:Bxe_B2896 transcriptional regulator, GntR family.


ensembl_gene_id: Bphy_4361
symbol: Bphy_4361
gene_biotype: protein_coding
description:
  TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: bxe:Bxe_B2895 putative succinate dehydrogenase cytochromeb-556 subunit.


ensembl_gene_id: Bphy_4362
symbol: Bphy_4362
gene_biotype: protein_coding
description:
  TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: bxe:Bxe_B2894 putative succinate dehydrogenase.


ensembl_gene_id: Bphy_4363
symbol: Bphy_4363
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_B2893 succinate dehydrogenase, flavoproteinsubunit; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.


ensembl_gene_id: Bphy_4364
symbol: Bphy_4364
gene_biotype: protein_coding
description:
  TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: bxe:Bxe_B2892 succinate dehydrogenase/fumarate reductase iron-sulfur protein.


ensembl_gene_id: Bphy_4366
symbol: Bphy_4366
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_B2890 citrate synthase I; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; Belongs to the citrate synthase family.


ensembl_gene_id: Bphy_4367
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: Bphy_4368
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: Bphy_4369
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: Bphy_4370
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: Bphy_4372
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: Bphy_4373
symbol: trpF
gene_biotype: protein_coding
description:
  PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: bxe:Bxe_B2882 phosphoribosylanthranilate isomerase; Belongs to the TrpF family.


ensembl_gene_id: Bphy_4374
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: Bphy_4375
symbol: Bphy_4375
gene_biotype: protein_coding
description:
  PFAM: DNA methylase N-4/N-6 domain protein; KEGG: bxe:Bxe_B2880 putative modification methylase; Belongs to the N(4)/N(6)-methyltransferase family.


ensembl_gene_id: Bphy_4376
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: Bphy_4377
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: Bphy_4378
symbol: Bphy_4378
gene_biotype: protein_coding
description:
  TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; KEGG: bxe:Bxe_B2877 folylpolyglutamate synthetase; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: Bphy_4380
symbol: Bphy_4380
gene_biotype: protein_coding
description:
  PFAM: Colicin V production protein; KEGG: bxe:Bxe_B2875 putative bacteriocin production related protein.


ensembl_gene_id: Bphy_4381
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: Bphy_4382
symbol: metZ
gene_biotype: protein_coding
description:
  O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.


ensembl_gene_id: Bphy_4383
symbol: Bphy_4383
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_B2872 transcriptional regulator, AraC family.


ensembl_gene_id: Bphy_4386
symbol: Bphy_4386
gene_biotype: protein_coding
description:
  PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: bxe:Bxe_B2869 putative CorC/HlyC Co++/Mg++ transporter.


ensembl_gene_id: Bphy_4387
symbol: Bphy_4387
gene_biotype: protein_coding
description:
  Malto-oligosyltrehalose synthase; KEGG: bxe:Bxe_B2867 putative glycosyl hydrolase; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.


ensembl_gene_id: Bphy_4388
symbol: Bphy_4388
gene_biotype: protein_coding
description:
  4-alpha-glucanotransferase; KEGG: bxe:Bxe_B2866 glycoside hydrolase, family 77; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77.


ensembl_gene_id: Bphy_4389
symbol: Bphy_4389
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_B2865 putative trehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.


ensembl_gene_id: Bphy_4390
symbol: Bphy_4390
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_B2864 putative glycogen operon protein GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: Bphy_4391
symbol: glgB
gene_biotype: protein_coding
description:
  1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: Bphy_4392
symbol: Bphy_4392
gene_biotype: protein_coding
description:
  Trehalose synthase; KEGG: bxe:Bxe_B2862 putative trehalose synthase; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.


ensembl_gene_id: Bphy_4393
symbol: glgE
gene_biotype: protein_coding
description:
  Alpha amylase catalytic region; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.


ensembl_gene_id: Bphy_4400
symbol: Bphy_4400
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B2854 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_4402
symbol: Bphy_4402
gene_biotype: protein_coding
description:
  Transcriptional regulator, ModE family; PFAM: regulatory protein LysR; TOBE domain protein; KEGG: bxe:Bxe_B2851 transcriptional regulator, ModE family.


ensembl_gene_id: Bphy_4403
symbol: Bphy_4403
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B2850 ABC molybdate transporter, ATPase subunit.


ensembl_gene_id: Bphy_4404
symbol: Bphy_4404
gene_biotype: protein_coding
description:
  Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: Bphy_4405
symbol: Bphy_4405
gene_biotype: protein_coding
description:
  TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_B2848 ABC molybdate transporter, periplasmic ligand binding protein.


ensembl_gene_id: Bphy_4406
symbol: Bphy_4406
gene_biotype: protein_coding
description:
  PFAM: phosphoesterase PA-phosphatase related; KEGG: bxe:Bxe_B2847 putative phosphoesterase, PA-phosphatase related.


ensembl_gene_id: Bphy_4409
symbol: Bphy_4409
gene_biotype: protein_coding
description:
  Deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: bxe:Bxe_B2844 deoxyribodipyrimidine photolyase.


ensembl_gene_id: Bphy_4412
symbol: thrB
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_B2840 homoserine kinase ThrB; TIGRFAM: homoserine kinase; PFAM: aminoglycoside phosphotransferase; Belongs to the pseudomonas-type ThrB family.


ensembl_gene_id: Bphy_4414
symbol: amn
gene_biotype: protein_coding
description:
  AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations.


ensembl_gene_id: Bphy_4417
symbol: Bphy_4417
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bpd:BURPS668_0281 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_4418
symbol: Bphy_4418
gene_biotype: protein_coding
description:
  PFAM: conserved hypothetical protein; KEGG: bxe:Bxe_B2835 conserved hypothetical protein 730; Belongs to the LOG family.


ensembl_gene_id: Bphy_4419
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: Bphy_4420
symbol: Bphy_4420
gene_biotype: protein_coding
description:
  NADH dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_B2833 putative NADH dehydrogenase.


ensembl_gene_id: Bphy_4421
symbol: Bphy_4421
gene_biotype: protein_coding
description:
  Carboxymethylenebutenolidase; PFAM: dienelactone hydrolase; KEGG: bxe:Bxe_B2832 dienelactone hydrolase.


ensembl_gene_id: Bphy_4422
symbol: Bphy_4422
gene_biotype: protein_coding
description:
  PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bxe:Bxe_B2173 transcriptional regulator, GntR family.


ensembl_gene_id: Bphy_4423
symbol: Bphy_4423
gene_biotype: protein_coding
description:
  PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bxe:Bxe_B2172 3-hydroxyisobutyrate dehydrogenase.


ensembl_gene_id: Bphy_4425
symbol: Bphy_4425
gene_biotype: protein_coding
description:
  PFAM: class II aldolase/adducin family protein; KEGG: bxe:Bxe_B2170 putative L-fuculose phosphate aldolase.


ensembl_gene_id: Bphy_4426
symbol: Bphy_4426
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0475 major facilitator superfamily (MFS_1) transporter.


ensembl_gene_id: Bphy_4427
symbol: Bphy_4427
gene_biotype: protein_coding
description:
  PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bte:BTH_II0973 hydroxypyruvate isomerase; Belongs to the hyi family.


ensembl_gene_id: Bphy_4428
symbol: Bphy_4428
gene_biotype: protein_coding
description:
  PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: bxe:Bxe_B2168 hypothetical protein.


ensembl_gene_id: Bphy_4429
symbol: Bphy_4429
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: reu:Reut_C6128 major facilitator superfamily MFS_1.


ensembl_gene_id: Bphy_4430
symbol: Bphy_4430
gene_biotype: protein_coding
description:
  PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: reu:Reut_C6127 succinylglutamate desuccinylase/aspartoacylase.


ensembl_gene_id: Bphy_4431
symbol: Bphy_4431
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reu:Reut_C6126 regulatory protein, LysR:LysR, substrate-binding; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: Bphy_4433
symbol: Bphy_4433
gene_biotype: protein_coding
description:
  Transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bxe:Bxe_B0606 transcriptional regulator, Crp/Fnr family.


ensembl_gene_id: Bphy_4435
symbol: Bphy_4435
gene_biotype: protein_coding
description:
  PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: atu:Atu4191 transcriptional regulator, GntR family.


ensembl_gene_id: Bphy_4436
symbol: Bphy_4436
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B0540 major facilitator superfamily (MFS) multidrug efflux pump.


ensembl_gene_id: Bphy_4439
symbol: Bphy_4439
gene_biotype: protein_coding
description:
  Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: bxe:Bxe_B0610 transcriptional regulator, LuxR family.


ensembl_gene_id: Bphy_4442
symbol: Bphy_4442
gene_biotype: protein_coding
description:
  Gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bmv:BMASAVP1_1190 putative gluconolactonase.


ensembl_gene_id: Bphy_4444
symbol: Bphy_4444
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bur:Bcep18194_A4846 ABC transporter, ATPase subunit.


ensembl_gene_id: Bphy_4445
symbol: Bphy_4445
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_1592 binding-protein-dependent transport systems inner membrane component.


ensembl_gene_id: Bphy_4446
symbol: Bphy_4446
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bch:Bcen2424_1687 binding-protein-dependent transport systems inner membrane component.


ensembl_gene_id: Bphy_4447
symbol: Bphy_4447
gene_biotype: protein_coding
description:
  PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: bbr:BB1998 dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.


ensembl_gene_id: Bphy_4448
symbol: Bphy_4448
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_B0613 putative short-chain dehydrogenase.


ensembl_gene_id: Bphy_4452
symbol: Bphy_4452
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: bxe:Bxe_B0617 transcriptional regulator, AraC family.


ensembl_gene_id: Bphy_4453
symbol: Bphy_4453
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF6 transmembrane; KEGG: bxe:Bxe_B0640 putative transmembrane protein.


ensembl_gene_id: Bphy_4455
symbol: Bphy_4455
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B0642 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_4456
symbol: Bphy_4456
gene_biotype: protein_coding
description:
  4-hydroxybenzoate 3-monooxygenase; PFAM: monooxygenase FAD-binding; KEGG: bte:BTH_II0045 4-hydroxybenzoate hydroxylase.


ensembl_gene_id: Bphy_4457
symbol: Bphy_4457
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_B0643 3-oxoadipate CoA-transferase subunit A (PcaI); TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase.


ensembl_gene_id: Bphy_4458
symbol: Bphy_4458
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_B0644 3-oxoadipate CoA-transferase subunit B (PcaJ); TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase.


ensembl_gene_id: Bphy_4459
symbol: Bphy_4459
gene_biotype: protein_coding
description:
  TIGRFAM: 3-carboxy-cis,cis-muconate cycloisomerase; PFAM: fumarate lyase; KEGG: bxe:Bxe_B0645 3-carboxy-cis,cis-muconate cycloisomerase(PcaB).


ensembl_gene_id: Bphy_4460
symbol: Bphy_4460
gene_biotype: protein_coding
description:
  TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_B0646 3-oxoadipate enol-lactonase (PcaD).


ensembl_gene_id: Bphy_4461
symbol: Bphy_4461
gene_biotype: protein_coding
description:
  KEGG: bvi:Bcep1808_3739 4-carboxymuconolactone decarboxylase; TIGRFAM: 4-carboxymuconolactone decarboxylase; PFAM: Carboxymuconolactone decarboxylase.


ensembl_gene_id: Bphy_4462
symbol: Bphy_4462
gene_biotype: protein_coding
description:
  PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B0658 ABC branched chain amino acid family transporter, fused inner membrane subunits; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Bphy_4463
symbol: Bphy_4463
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B0659 ABC branched chain amino acid family transporter, ATPase subunit.


ensembl_gene_id: Bphy_4464
symbol: Bphy_4464
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B0660 ABC branched chain amino acid family transporter, ATPase subunit.


ensembl_gene_id: Bphy_4465
symbol: Bphy_4465
gene_biotype: protein_coding
description:
  PFAM: Extracellular ligand-binding receptor; KEGG: bxe:Bxe_B0664 ABC branched chain amino acid family transporter, periplasmic ligand binding protein.


ensembl_gene_id: Bphy_4468
symbol: Bphy_4468
gene_biotype: protein_coding
description:
  PFAM: aminotransferase class-III; KEGG: bxe:Bxe_B0670 omega-amino acid--pyruvate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: Bphy_4469
symbol: Bphy_4469
gene_biotype: protein_coding
description:
  PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bxe:Bxe_B0671 transcriptional regulator, GntR family with aminotransferase activity.


ensembl_gene_id: Bphy_4471
symbol: Bphy_4471
gene_biotype: protein_coding
description:
  TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bte:BTH_I0948 EAL/GGDEF domain protein.


ensembl_gene_id: Bphy_4472
symbol: Bphy_4472
gene_biotype: protein_coding
description:
  TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bxe:Bxe_B1277 periplasmic sensor diguanylate cyclase (GGDEF domain).


ensembl_gene_id: Bphy_4474
symbol: Bphy_4474
gene_biotype: protein_coding
description:
  PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bxe:Bxe_B0672 amino acid efflux pump, RhtB family, LysE superfamily.


ensembl_gene_id: Bphy_4477
symbol: Bphy_4477
gene_biotype: protein_coding
description:
  PFAM: Sulfate transporter/antisigma-factor antagonist STAS; sulphate transporter; KEGG: bcn:Bcen_3792 sulphate transporter.


ensembl_gene_id: Bphy_4478
symbol: Bphy_4478
gene_biotype: protein_coding
description:
  PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_A1399 putative lactoylglutathione lyase.


ensembl_gene_id: Bphy_4480
symbol: Bphy_4480
gene_biotype: protein_coding
description:
  PFAM: glucose-methanol-choline oxidoreductase; KEGG: bxe:Bxe_A1401 putative 2-keto-gluconate dehydrogenase.


ensembl_gene_id: Bphy_4484
symbol: Bphy_4484
gene_biotype: protein_coding
description:
  Chloride channel core; PFAM: CBS domain containing protein; Chloride channel core; KEGG: bxe:Bxe_A3930 putative voltage-gated chloride channel with CBS domains.


ensembl_gene_id: Bphy_4486
symbol: Bphy_4486
gene_biotype: protein_coding
description:
  PFAM: CBS domain containing protein; HPP family protein; KEGG: bch:Bcen2424_4541 CBS domain containing membrane protein.


ensembl_gene_id: Bphy_4489
symbol: Bphy_4489
gene_biotype: protein_coding
description:
  PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: bxe:Bxe_B0725 transglutaminase family protein.


ensembl_gene_id: Bphy_4490
symbol: Bphy_4490
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF403; protein of unknown function DUF404; protein of unknown function DUF407; KEGG: bxe:Bxe_B0726 hypothetical protein.


ensembl_gene_id: Bphy_4491
symbol: Bphy_4491
gene_biotype: protein_coding
description:
  PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: bxe:Bxe_B0727 transglutaminase family protein.


ensembl_gene_id: Bphy_4494
symbol: Bphy_4494
gene_biotype: protein_coding
description:
  PFAM: secretion protein HlyD family protein; KEGG: bxe:Bxe_B0736 MFS multidrug efflux pump, membrane fusion protein, EmrA subfamily.


ensembl_gene_id: Bphy_4495
symbol: Bphy_4495
gene_biotype: protein_coding
description:
  TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B0737 major facilitator superfamily (MFS) multidrug efflux pump, EmrB/QacA subfamily.


ensembl_gene_id: Bphy_4496
symbol: Bphy_4496
gene_biotype: protein_coding
description:
  TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_B0738 MFS multidrug efflux pump, outer membrane lipoprotein, NodT family.


ensembl_gene_id: Bphy_4497
symbol: Bphy_4497
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_B0739 thiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Bphy_4501
symbol: Bphy_4501
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_B0753 ABC oligopeptide/dipeptide transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.


ensembl_gene_id: Bphy_4502
symbol: Bphy_4502
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_B0754 ABC oligopeptide/dipeptide transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.


ensembl_gene_id: Bphy_4503
symbol: Bphy_4503
gene_biotype: protein_coding
description:
  PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B0755 ABC oligopeptide/dipeptide transporter, inner membrane subunit.


ensembl_gene_id: Bphy_4504
symbol: Bphy_4504
gene_biotype: protein_coding
description:
  Alkaline phosphatase; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B0756 ABC oligopeptide/dipeptide transporter, inner membrane subunit.


ensembl_gene_id: Bphy_4505
symbol: Bphy_4505
gene_biotype: protein_coding
description:
  PFAM: extracellular solute-binding protein family 5; KEGG: bxe:Bxe_B0757 ABC oligopeptide/dipeptide transporter, periplasmic ligand binding protein.


ensembl_gene_id: Bphy_4506
symbol: Bphy_4506
gene_biotype: protein_coding
description:
  Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein; KEGG: bxe:Bxe_B0758 transcriptional regulator, XRE family with cupin sensor domain.


ensembl_gene_id: Bphy_4508
symbol: Bphy_4508
gene_biotype: protein_coding
description:
  Amino acid/peptide transporter; KEGG: bxe:Bxe_B0759 major facilitator superfamily (MFS) peptide/H+symporter, POT family; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; major facilitator superfamily MFS_1.


ensembl_gene_id: Bphy_4509
symbol: Bphy_4509
gene_biotype: protein_coding
description:
  PFAM: histone family protein DNA-binding protein; KEGG: bxe:Bxe_B0762 Bph2; Belongs to the bacterial histone-like protein family.


ensembl_gene_id: Bphy_4510
symbol: Bphy_4510
gene_biotype: protein_coding
description:
  PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bxe:Bxe_B0760 transcriptional regulator, GntR family.


ensembl_gene_id: Bphy_4511
symbol: Bphy_4511
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: bxe:Bxe_B0763 hypothetical protein.


ensembl_gene_id: Bphy_4513
symbol: Bphy_4513
gene_biotype: protein_coding
description:
  PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: bxe:Bxe_B0765 transglutaminase family protein.


ensembl_gene_id: Bphy_4517
symbol: Bphy_4517
gene_biotype: protein_coding
description:
  PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: bxe:Bxe_B2554 formate dehydrogenase-O, major subunit.


ensembl_gene_id: Bphy_4518
symbol: Bphy_4518
gene_biotype: protein_coding
description:
  TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: bte:BTH_II0707 formate dehydrogenase, alpha subunit, selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: Bphy_4519
symbol: Bphy_4519
gene_biotype: protein_coding
description:
  TIGRFAM: formate dehydrogenase, beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Formate dehydrogenase transmembrane domain protein; KEGG: bch:Bcen2424_3985 formate dehydrogenase, beta subunit.


ensembl_gene_id: Bphy_4520
symbol: Bphy_4520
gene_biotype: protein_coding
description:
  TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: bam:Bamb_3379 formate dehydrogenase, gamma subunit.


ensembl_gene_id: Bphy_4521
symbol: fdhE
gene_biotype: protein_coding
description:
  Formate dehydrogenase accessory protein FdhE; Necessary for formate dehydrogenase activity. Belongs to the FdhE family.


ensembl_gene_id: Bphy_4522
symbol: selA
gene_biotype: protein_coding
description:
  L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.


ensembl_gene_id: Bphy_4523
symbol: Bphy_4523
gene_biotype: protein_coding
description:
  TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3; KEGG: bmn:BMA10247_A0576 translation elongation factor, selenocysteine-specific.


ensembl_gene_id: Bphy_4526
symbol: Bphy_4526
gene_biotype: protein_coding
description:
  Transcriptional regulator, winged helix family; PFAM: transcriptional regulator domain protein; KEGG: bvi:Bcep1808_5664 transcriptional regulator, winged helix family.


ensembl_gene_id: Bphy_4527
symbol: Bphy_4527
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bvi:Bcep1808_5665 two component transcriptional regulator, winged helix family.


ensembl_gene_id: Bphy_4528
symbol: Bphy_4528
gene_biotype: protein_coding
description:
  PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; SMART: serine/threonine protein kinase; KEGG: bvi:Bcep1808_5666 histidine kinase, dimerisation/phosphoacceptor.


ensembl_gene_id: Bphy_4529
symbol: Bphy_4529
gene_biotype: protein_coding
description:
  KEGG: bvi:Bcep1808_5667 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.


ensembl_gene_id: Bphy_4530
symbol: Bphy_4530
gene_biotype: protein_coding
description:
  PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bvi:Bcep1808_5668 response regulator receiver sensor signal transduction histidine kinase.


ensembl_gene_id: Bphy_4534
symbol: Bphy_4534
gene_biotype: protein_coding
description:
  PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bvi:Bcep1808_5389 regulatory proteins, IclR.


ensembl_gene_id: Bphy_4535
symbol: mhpA
gene_biotype: protein_coding
description:
  Monooxygenase FAD-binding; Catalyzes the insertion of one atom of molecular oxygen into position 2 of the phenyl ring of 3-(3-hydroxyphenyl)propionate (3-HPP) and hydroxycinnamic acid (3HCI).


ensembl_gene_id: Bphy_4536
symbol: mhpB
gene_biotype: protein_coding
description:
  Extradiol ring-cleavage dioxygenase class III protein subunit B; Catalyzes the non-heme iron(II)-dependent oxidative cleavage of 2,3-dihydroxyphenylpropionic acid and 2,3-dihydroxicinnamic acid into 2-hydroxy-6-ketononadienedioate and 2-hydroxy-6- ketononatrienedioate, respectively; Belongs to the LigB/MhpB extradiol dioxygenase family.


ensembl_gene_id: Bphy_4537
symbol: mhpD
gene_biotype: protein_coding
description:
  4-oxalocrotonate decarboxylase; Catalyzes the conversion of 2-hydroxypentadienoic acid (enolic form of 2-oxopent-4-enoate) to 4-hydroxy-2-ketopentanoic acid. Belongs to the hydratase/decarboxylase family. MhpD subfamily.


ensembl_gene_id: Bphy_4540
symbol: Bphy_4540
gene_biotype: protein_coding
description:
  PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_5383 major facilitator superfamily MFS_1.


ensembl_gene_id: Bphy_4541
symbol: mhpC
gene_biotype: protein_coding
description:
  Alpha/beta hydrolase fold protein; Catalyzes the cleavage of the C5-C6 bond of 2-hydroxy-6- oxononadienedioate and 2-hydroxy-6-oxononatrienedioate, a dienol ring fission product of the bacterial meta-cleavage pathway for degradation of phenylpropionic acid.


ensembl_gene_id: Bphy_4542
symbol: Bphy_4542
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: kpn:KPN_01750 putative permeases of the major facilitator superfamily.


ensembl_gene_id: Bphy_4543
symbol: Bphy_4543
gene_biotype: protein_coding
description:
  Gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; KEGG: bxe:Bxe_B1050 gamma-glutamyltransferase.


ensembl_gene_id: Bphy_4544
symbol: Bphy_4544
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: vei:Veis_0841 transcriptional regulator, GntR family.


ensembl_gene_id: Bphy_4547
symbol: Bphy_4547
gene_biotype: protein_coding
description:
  PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bxe:Bxe_B1053 CutL; carbon monoxide dehydrogenase large chain.


ensembl_gene_id: Bphy_4549
symbol: Bphy_4549
gene_biotype: protein_coding
description:
  PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bxe:Bxe_B1055 putative iron-sulfur binding protein.


ensembl_gene_id: Bphy_4555
symbol: Bphy_4555
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B1061 ABC polar amino acid family transporter, ATPase subunit.


ensembl_gene_id: Bphy_4556
symbol: Bphy_4556
gene_biotype: protein_coding
description:
  TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1062 ABC polar amino acid family transporter, inner membrane subunit.


ensembl_gene_id: Bphy_4557
symbol: Bphy_4557
gene_biotype: protein_coding
description:
  TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1063 ABC polar amino acid family transporter, inner membrane subunit.


ensembl_gene_id: Bphy_4558
symbol: Bphy_4558
gene_biotype: protein_coding
description:
  PFAM: extracellular solute-binding protein family 3; KEGG: bxe:Bxe_B1064 ABC polar amino acid family transporter, periplasmic ligand binding protein.


ensembl_gene_id: Bphy_4559
symbol: Bphy_4559
gene_biotype: protein_coding
description:
  PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bxe:Bxe_A1406 transcriptional regulator, GntR family.


ensembl_gene_id: Bphy_4561
symbol: Bphy_4561
gene_biotype: protein_coding
description:
  PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bvi:Bcep1808_6052 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.


ensembl_gene_id: Bphy_4562
symbol: Bphy_4562
gene_biotype: protein_coding
description:
  PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: bxe:Bxe_A1409 hypothetical protein.


ensembl_gene_id: Bphy_4564
symbol: Bphy_4564
gene_biotype: protein_coding
description:
  PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: bxe:Bxe_A1411 putative thiamine-monophosphate kinase.


ensembl_gene_id: Bphy_4569
symbol: Bphy_4569
gene_biotype: protein_coding
description:
  KEGG: bvi:Bcep1808_6060 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein.


ensembl_gene_id: Bphy_4572
symbol: Bphy_4572
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reh:H16_B1786 short-chain alcohol dehydrogenase of unknown specificity.


ensembl_gene_id: Bphy_4575
symbol: Bphy_4575
gene_biotype: protein_coding
description:
  PFAM: cyclic nucleotide-binding; ATP-binding region ATPase domain protein; KEGG: gvi:gll1662 similar to two-component sensor histidine kinase.


ensembl_gene_id: Bphy_4576
symbol: Bphy_4576
gene_biotype: protein_coding
description:
  PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; response regulator receiver; KEGG: gvi:glr0480 thioredoxin reductase carring response regulator receiver domain.


ensembl_gene_id: Bphy_4578
symbol: Bphy_4578
gene_biotype: protein_coding
description:
  PFAM: extracellular solute-binding protein family 3; KEGG: bte:BTH_II1655 glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein.


ensembl_gene_id: Bphy_4588
symbol: Bphy_4588
gene_biotype: protein_coding
description:
  Adenylate/guanylate cyclase with TPR repeats; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; TPR repeat-containing protein; sterile alpha motif SAM protein; Sterile alpha motif homology 2; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: reh:H16_A1278 ATP-dependent transcriptional regulator containing adenylate cyclase related domains.


ensembl_gene_id: Bphy_4590
symbol: Bphy_4590
gene_biotype: protein_coding
description:
  Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bam:Bamb_1342 transcriptional regulator, LacI family.


ensembl_gene_id: Bphy_4592
symbol: Bphy_4592
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_C7622 major facilitator superfamily, (MFS_1) family.


ensembl_gene_id: Bphy_4593
symbol: Bphy_4593
gene_biotype: protein_coding
description:
  PFAM: dihydrodipicolinate synthetase; KEGG: bvi:Bcep1808_1425 dihydrodipicolinate synthetase; Belongs to the DapA family.


ensembl_gene_id: Bphy_4597
symbol: Bphy_4597
gene_biotype: protein_coding
description:
  PFAM: O-methyltransferase family 2; Methyltransferase type 12; KEGG: reu:Reut_B5557 O-methyltransferase, family 2.


ensembl_gene_id: Bphy_4599
symbol: Bphy_4599
gene_biotype: protein_coding
description:
  PFAM: cyclic nucleotide-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: fal:FRAAL1961 putative thioredoxin reductase.


ensembl_gene_id: Bphy_4607
symbol: Bphy_4607
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bch:Bcen2424_5916 short-chain dehydrogenase/reductase SDR.


ensembl_gene_id: Bphy_4608
symbol: Bphy_4608
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_3222 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_4610
symbol: Bphy_4610
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_B0554 amidase, hydantoinase/carbamoylase; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; peptidase dimerisation domain protein.


ensembl_gene_id: Bphy_4611
symbol: Bphy_4611
gene_biotype: protein_coding
description:
  PFAM: CsbD family protein; KEGG: bxe:Bxe_A2598 hypothetical protein; Belongs to the UPF0337 (CsbD) family.


ensembl_gene_id: Bphy_4618
symbol: Bphy_4618
gene_biotype: protein_coding
description:
  TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; KEGG: bxe:Bxe_B0834 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: Bphy_4619
symbol: Bphy_4619
gene_biotype: protein_coding
description:
  PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bxe:Bxe_B0835 transcriptional regulator, GntR family, with aminotransferase activity.


ensembl_gene_id: Bphy_4621
symbol: Bphy_4621
gene_biotype: protein_coding
description:
  TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B0837 ABC phosphonate transporter, inner membrane subunit PhnE.


ensembl_gene_id: Bphy_4622
symbol: Bphy_4622
gene_biotype: protein_coding
description:
  TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; phosphonate ABC transporter, periplasmic phosphonate binding protein; KEGG: bxe:Bxe_B0838 ABC phosphonates transporter, periplasmic ligand binding protein PhnD.


ensembl_gene_id: Bphy_4623
symbol: phnC
gene_biotype: protein_coding
description:
  Phosphonate ABC transporter, ATPase subunit; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.


ensembl_gene_id: Bphy_4628
symbol: Bphy_4628
gene_biotype: protein_coding
description:
  TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bxe:Bxe_B0843 heavy metal/H+ antiporter, CDF family.


ensembl_gene_id: Bphy_4629
symbol: Bphy_4629
gene_biotype: protein_coding
description:
  PFAM: purine nucleoside permease; KEGG: bxe:Bxe_B0845 concentrative nucleoside/H+ anitporter, CNT family.


ensembl_gene_id: Bphy_4632
symbol: Bphy_4632
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B0847 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_4634
symbol: Bphy_4634
gene_biotype: protein_coding
description:
  TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bxe:Bxe_B0849 RND efflux pump, membrane fusion protein, CzcB subfamily; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Bphy_4635
symbol: Bphy_4635
gene_biotype: protein_coding
description:
  TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bxe:Bxe_B0850 hydrophobe/amphiphile efflux pump, RND family.


ensembl_gene_id: Bphy_4636
symbol: Bphy_4636
gene_biotype: protein_coding
description:
  TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_B0851 RND efflux system, outer membrane lipoprotein, NodT family.


ensembl_gene_id: Bphy_4637
symbol: mntH
gene_biotype: protein_coding
description:
  Mn2+/Fe2+ transporter, NRAMP family; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.


ensembl_gene_id: Bphy_4643
symbol: Bphy_4643
gene_biotype: protein_coding
description:
  Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; KEGG: bxe:Bxe_B0860 transcriptional regulator, XRE family.


ensembl_gene_id: Bphy_4648
symbol: Bphy_4648
gene_biotype: protein_coding
description:
  PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bur:Bcep18194_B1065 TPR repeat protein.


ensembl_gene_id: Bphy_4649
symbol: Bphy_4649
gene_biotype: protein_coding
description:
  PFAM: heat shock protein Hsp20; KEGG: bam:Bamb_6389 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: Bphy_4650
symbol: Bphy_4650
gene_biotype: protein_coding
description:
  PFAM: heat shock protein Hsp20; KEGG: bpd:BURPS668_1441 heat shock protein, HSP20 family; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: Bphy_4652
symbol: Bphy_4652
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate.


ensembl_gene_id: Bphy_4653
symbol: Bphy_4653
gene_biotype: protein_coding
description:
  PFAM: Aldehyde Dehydrogenase; KEGG: bxe:Bxe_B1400 betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: Bphy_4654
symbol: Bphy_4654
gene_biotype: protein_coding
description:
  PFAM: RbsD or FucU transport; KEGG: bxe:Bxe_C1273 sugar binding or transport, RbsD/FucU; Belongs to the RbsD / FucU family.


ensembl_gene_id: Bphy_4656
symbol: Bphy_4656
gene_biotype: protein_coding
description:
  Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B1402 ABC sugar transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Bphy_4657
symbol: Bphy_4657
gene_biotype: protein_coding
description:
  PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bxe:Bxe_B1403 ABC sugar transporter, periplasmic ligand binding protein.


ensembl_gene_id: Bphy_4658
symbol: Bphy_4658
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B1404 ABC sugar transporter, ATPase subunit.


ensembl_gene_id: Bphy_4659
symbol: Bphy_4659
gene_biotype: protein_coding
description:
  Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B1405 ABC sugar transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Bphy_4663
symbol: Bphy_4663
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_3833 major facilitator superfamily MFS_1.


ensembl_gene_id: Bphy_4664
symbol: Bphy_4664
gene_biotype: protein_coding
description:
  PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B0871 major facilitator superfamily (MFS)metabolite/H+ symporter.


ensembl_gene_id: Bphy_4665
symbol: Bphy_4665
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bxe:Bxe_B0872 two component transcriptional regulator, winged helix family.


ensembl_gene_id: Bphy_4666
symbol: Bphy_4666
gene_biotype: protein_coding
description:
  PFAM: dihydrodipicolinate synthetase; KEGG: bxe:Bxe_B0873 putative dihydrodipicolinate synthase; Belongs to the DapA family.


ensembl_gene_id: Bphy_4667
symbol: Bphy_4667
gene_biotype: protein_coding
description:
  PFAM: proline racemase; KEGG: bxe:Bxe_B0874 putative proline racemase; Belongs to the proline racemase family.


ensembl_gene_id: Bphy_4668
symbol: Bphy_4668
gene_biotype: protein_coding
description:
  PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_B0875 putative oxidoreductase.


ensembl_gene_id: Bphy_4670
symbol: Bphy_4670
gene_biotype: protein_coding
description:
  FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_B0877 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.


ensembl_gene_id: Bphy_4671
symbol: Bphy_4671
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; PAS fold-4 domain protein; KEGG: bxe:Bxe_B0878 transcriptional regulator, AraC family.


ensembl_gene_id: Bphy_4675
symbol: Bphy_4675
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A2031 major facilitator superfamily (MFS) multidrug efflux pump.


ensembl_gene_id: Bphy_4680
symbol: Bphy_4680
gene_biotype: protein_coding
description:
  PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: bxe:Bxe_B1315 DNA ligase (ATP).


ensembl_gene_id: Bphy_4685
symbol: Bphy_4685
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B2277 ABC efflux pump, ATPase subunit.


ensembl_gene_id: Bphy_4687
symbol: Bphy_4687
gene_biotype: protein_coding
description:
  Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_B2272 signal transduction histidine kinase.


ensembl_gene_id: Bphy_4689
symbol: Bphy_4689
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B2270 putative major facilitator superfamily (MFS)oxalate/formate antiporter.


ensembl_gene_id: Bphy_4694
symbol: Bphy_4694
gene_biotype: protein_coding
description:
  TIGRFAM: formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bxe:Bxe_B2267 acyl-CoA transferase.


ensembl_gene_id: Bphy_4697
symbol: Bphy_4697
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B2263 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_4699
symbol: Bphy_4699
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B2261 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_4700
symbol: Bphy_4700
gene_biotype: protein_coding
description:
  PFAM: Aldehyde Dehydrogenase; KEGG: bxe:Bxe_B2260 betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: Bphy_4701
symbol: Bphy_4701
gene_biotype: protein_coding
description:
  PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bxe:Bxe_B2246 amino acid efflux pump, RhtB family, LysE superfamily.


ensembl_gene_id: Bphy_4705
symbol: Bphy_4705
gene_biotype: protein_coding
description:
  PFAM: Transglycosylase-associated protein; KEGG: reh:H16_B2506 hypothetical membrane spanning protein.


ensembl_gene_id: Bphy_4707
symbol: Bphy_4707
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bmn:BMA10247_A2210 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_4708
symbol: Bphy_4708
gene_biotype: protein_coding
description:
  D-amino-acid dehydrogenase; PFAM: FAD dependent oxidoreductase; KEGG: bmn:BMA10247_A2211 putative D-amino acid dehydrogenase, small subunit.


ensembl_gene_id: Bphy_4709
symbol: Bphy_4709
gene_biotype: protein_coding
description:
  PFAM: extracellular solute-binding protein family 3; KEGG: bmn:BMA10247_A2212 putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein.


ensembl_gene_id: Bphy_4710
symbol: Bphy_4710
gene_biotype: protein_coding
description:
  PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B2214 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Bphy_4712
symbol: cobB
gene_biotype: protein_coding
description:
  Silent information regulator protein Sir2; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.


ensembl_gene_id: Bphy_4713
symbol: Bphy_4713
gene_biotype: protein_coding
description:
  PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bxe:Bxe_B2212 hypothetical protein.


ensembl_gene_id: Bphy_4714
symbol: Bphy_4714
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF938; Methyltransferase type 11; KEGG: reh:H16_B2396 hypothetical protein.


ensembl_gene_id: Bphy_4715
symbol: Bphy_4715
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.


ensembl_gene_id: Bphy_4720
symbol: Bphy_4720
gene_biotype: protein_coding
description:
  Peptidase M23B; PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: bxe:Bxe_B2205 putative lipoprotein.


ensembl_gene_id: Bphy_4727
symbol: Bphy_4727
gene_biotype: protein_coding
description:
  PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bxe:Bxe_B2226 xanthine dehydrogenase.


ensembl_gene_id: Bphy_4728
symbol: Bphy_4728
gene_biotype: protein_coding
description:
  PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: bxe:Bxe_B2225 oxidoreductase.


ensembl_gene_id: Bphy_4730
symbol: Bphy_4730
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_B2108 aspartate carbamoyltransferase; TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.


ensembl_gene_id: Bphy_4735
symbol: Bphy_4735
gene_biotype: protein_coding
description:
  TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; KEGG: bxe:Bxe_B2102 putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains).


ensembl_gene_id: Bphy_4737
symbol: Bphy_4737
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bxe:Bxe_B2087 transcriptional regulator, AraC family.


ensembl_gene_id: Bphy_4740
symbol: Bphy_4740
gene_biotype: protein_coding
description:
  PFAM: extracellular solute-binding protein family 3; KEGG: bam:Bamb_2212 extracellular solute-binding protein, family 3.


ensembl_gene_id: Bphy_4743
symbol: Bphy_4743
gene_biotype: protein_coding
description:
  TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: mms:mma_0132 formate dehydrogenase oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: Bphy_4744
symbol: Bphy_4744
gene_biotype: protein_coding
description:
  PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: mms:mma_0131 transcriptional regulator, GntR family.


ensembl_gene_id: Bphy_4749
symbol: Bphy_4749
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_A1835 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.


ensembl_gene_id: Bphy_4750
symbol: Bphy_4750
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B1317 short-chain dehydrogenase.


ensembl_gene_id: Bphy_4753
symbol: Bphy_4753
gene_biotype: protein_coding
description:
  PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bpd:BURPS668_A2916 S-(hydroxymethyl)glutathione dehydrogenase.


ensembl_gene_id: Bphy_4756
symbol: Bphy_4756
gene_biotype: protein_coding
description:
  PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bur:Bcep18194_B2652 pyridoxamine 5'-phosphate oxidase-related, FMN-binding.


ensembl_gene_id: Bphy_4758
symbol: Bphy_4758
gene_biotype: protein_coding
description:
  TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; KEGG: azc:AZC_2290 putative Na+/phosphate symporter.


ensembl_gene_id: Bphy_4761
symbol: Bphy_4761
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: saq:Sare_0635 short-chain dehydrogenase/reductase SDR.


ensembl_gene_id: Bphy_4772
symbol: Bphy_4772
gene_biotype: protein_coding
description:
  TIGRFAM: DNA ligase D; DNA polymerase LigD, polymerase domain protein; DNA polymerase LigD, ligase domain protein; PFAM: DNA primase small subunit; ATP dependent DNA ligase; KEGG: bvi:Bcep1808_6891 ATP dependent DNA ligase.


ensembl_gene_id: Bphy_4774
symbol: Bphy_4774
gene_biotype: protein_coding
description:
  TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: bxe:Bxe_C0084 oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: Bphy_4777
symbol: Bphy_4777
gene_biotype: protein_coding
description:
  PFAM: CinA domain protein; KEGG: bxe:Bxe_C0164 competence/damage-inducible protein CinA; Belongs to the CinA family.


ensembl_gene_id: Bphy_4778
symbol: nadE-2
gene_biotype: protein_coding
description:
  NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.


ensembl_gene_id: Bphy_4781
symbol: Bphy_4781
gene_biotype: protein_coding
description:
  PFAM: response regulator receiver; KEGG: bxe:Bxe_B0713 response regulator receiver domain protein(CheY).


ensembl_gene_id: Bphy_4783
symbol: Bphy_4783
gene_biotype: protein_coding
description:
  PFAM: Circadian clock protein KaiC central region; SMART: AAA ATPase; KEGG: ppf:Pput_1936 non-specific serine/threonine protein kinase.


ensembl_gene_id: Bphy_4786
symbol: Bphy_4786
gene_biotype: protein_coding
description:
  KEGG: gvi:gll1493 two-component sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein.


ensembl_gene_id: Bphy_4792
symbol: Bphy_4792
gene_biotype: protein_coding
description:
  TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; KEGG: bxe:Bxe_C0167 putative cytochrome c oxidase subunit II.


ensembl_gene_id: Bphy_4793
symbol: Bphy_4793
gene_biotype: protein_coding
description:
  TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; KEGG: bxe:Bxe_C0168 putative cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: Bphy_4796
symbol: Bphy_4796
gene_biotype: protein_coding
description:
  Gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I; KEGG: bxe:Bxe_C0171 putative cytochrome c, class I.


ensembl_gene_id: Bphy_4797
symbol: Bphy_4797
gene_biotype: protein_coding
description:
  KEGG: nmu:Nmul_A2304 ATP-dependent DNA helicase, RecQ family; TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases.


ensembl_gene_id: Bphy_4801
symbol: Bphy_4801
gene_biotype: protein_coding
description:
  PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bxe:Bxe_B2482 putative zinc-containing dehydrogenase.


ensembl_gene_id: Bphy_4806
symbol: Bphy_4806
gene_biotype: protein_coding
description:
  PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bpd:BURPS668_A1281 translocator protein, LysE family.


ensembl_gene_id: Bphy_4808
symbol: Bphy_4808
gene_biotype: protein_coding
description:
  PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bxe:Bxe_B2018 putative N-ethylmaleimide reductase.


ensembl_gene_id: Bphy_4822
symbol: Bphy_4822
gene_biotype: protein_coding
description:
  PFAM: beta-lactamase domain protein; KEGG: bxe:Bxe_A4251 putative metallo-beta-lactamase superfamily protein.


ensembl_gene_id: Bphy_4828
symbol: Bphy_4828
gene_biotype: protein_coding
description:
  PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: bmn:BMA10247_0219 electron transfer flavoprotein, alpha subunit.


ensembl_gene_id: Bphy_4831
symbol: Bphy_4831
gene_biotype: protein_coding
description:
  PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: lbl:LBL_0679 electron transfer flavoprotein, alpha subunit.


ensembl_gene_id: Bphy_4832
symbol: Bphy_4832
gene_biotype: protein_coding
description:
  PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: acr:Acry_2071 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.


ensembl_gene_id: Bphy_4834
symbol: Bphy_4834
gene_biotype: protein_coding
description:
  PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sma:SAV1739 GntR-family transcriptional regulator.


ensembl_gene_id: Bphy_4840
symbol: Bphy_4840
gene_biotype: protein_coding
description:
  PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_2094 AMP-dependent synthetase and ligase.


ensembl_gene_id: Bphy_4843
symbol: Bphy_4843
gene_biotype: protein_coding
description:
  PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: bte:BTH_I0937 rubredoxin-related protein; Belongs to the rubredoxin family.


ensembl_gene_id: Bphy_4845
symbol: Bphy_4845
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: lbr:LVIS_0378 short-chain alcohol dehydrogenase.


ensembl_gene_id: Bphy_4849
symbol: Bphy_4849
gene_biotype: protein_coding
description:
  KEGG: azo:azo3860 tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase.


ensembl_gene_id: Bphy_4853
symbol: Bphy_4853
gene_biotype: protein_coding
description:
  PFAM: amino acid permease-associated region; KEGG: msm:MSMEG_1508 amino acid permease-associated region.


ensembl_gene_id: Bphy_4858
symbol: Bphy_4858
gene_biotype: protein_coding
description:
  PFAM: IstB domain protein ATP-binding protein; IstB ATP binding domain protein; SMART: AAA ATPase; KEGG: bvi:Bcep1808_4354 IstB domain protein ATP-binding protein.


ensembl_gene_id: Bphy_4859
symbol: Bphy_4859
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ppu:PP_4751 amino acid ABC transporter, ATP-binding protein.


ensembl_gene_id: Bphy_4860
symbol: Bphy_4860
gene_biotype: protein_coding
description:
  TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ppu:PP_4750 amino acid ABC transporter, permease protein.


ensembl_gene_id: Bphy_4861
symbol: Bphy_4861
gene_biotype: protein_coding
description:
  TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ppu:PP_4749 amino acid ABC transporter, permease protein.


ensembl_gene_id: Bphy_4862
symbol: Bphy_4862
gene_biotype: protein_coding
description:
  PFAM: extracellular solute-binding protein family 3; KEGG: pfl:PFL_3548 amino acid ABC transporter, periplasmic amino acid-binding protein.


ensembl_gene_id: Bphy_4864
symbol: Bphy_4864
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF1302; KEGG: bch:Bcen2424_5819 protein of unknown function DUF1302.


ensembl_gene_id: Bphy_4867
symbol: Bphy_4867
gene_biotype: protein_coding
description:
  PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: csa:Csal_2458 glucose-methanol-choline oxidoreductase.


ensembl_gene_id: Bphy_4868
symbol: Bphy_4868
gene_biotype: protein_coding
description:
  PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: smd:Smed_3705 alcohol dehydrogenase zinc-binding domain protein.


ensembl_gene_id: Bphy_4869
symbol: Bphy_4869
gene_biotype: protein_coding
description:
  PFAM: Carboxylesterase type B; KEGG: bur:Bcep18194_B0954 carboxylesterase, type B; Belongs to the type-B carboxylesterase/lipase family.


ensembl_gene_id: Bphy_4870
symbol: Bphy_4870
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF1329; KEGG: bur:Bcep18194_C6838 protein of unknown function DUF1329.


ensembl_gene_id: Bphy_4876
symbol: Bphy_4876
gene_biotype: protein_coding
description:
  PFAM: Carboxylesterase type B; KEGG: ccr:CC_0799 para-nitrobenzyl esterase; Belongs to the type-B carboxylesterase/lipase family.


ensembl_gene_id: Bphy_4879
symbol: Bphy_4879
gene_biotype: protein_coding
description:
  TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: dar:Daro_2762 hemerythrin HHE cation binding region.


ensembl_gene_id: Bphy_4880
symbol: Bphy_4880
gene_biotype: protein_coding
description:
  PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: csa:Csal_0343 ferredoxin.


ensembl_gene_id: Bphy_4882
symbol: Bphy_4882
gene_biotype: protein_coding
description:
  Phthalate 4,5-dioxygenase; PFAM: Rieske [2Fe-2S] domain protein; KEGG: reu:Reut_B5781 Rieske (2Fe-2S) region.


ensembl_gene_id: Bphy_4883
symbol: Bphy_4883
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: fre:Franean1_6238 short-chain dehydrogenase/reductase SDR.


ensembl_gene_id: Bphy_4886
symbol: Bphy_4886
gene_biotype: protein_coding
description:
  Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; KEGG: mlo:mlr3448 regulatory protein (MarR-family).


ensembl_gene_id: Bphy_4887
symbol: Bphy_4887
gene_biotype: protein_coding
description:
  PFAM: Enoyl-CoA hydratase/isomerase; KEGG: reu:Reut_C6037 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Bphy_4889
symbol: Bphy_4889
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bte:BTH_II0044 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_4891
symbol: Bphy_4891
gene_biotype: protein_coding
description:
  PFAM: transposase IS3/IS911 family protein; CENP-B DNA-binding; KEGG: bxe:Bxe_C0674 putative transposase.


ensembl_gene_id: Bphy_4893
symbol: Bphy_4893
gene_biotype: protein_coding
description:
  PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sco:SCO0179 putative zinc-containing dehydrogenase.


ensembl_gene_id: Bphy_4895
symbol: Bphy_4895
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: aci:ACIAD1622 putative transcriptional regulator (AraC family) (nitrilase regulator).


ensembl_gene_id: Bphy_4897
symbol: Bphy_4897
gene_biotype: protein_coding
description:
  PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: eba:ebA1946 phage-related integrase; Belongs to the 'phage' integrase family.


ensembl_gene_id: Bphy_4899
symbol: Bphy_4899
gene_biotype: protein_coding
description:
  PFAM: integrase family protein; KEGG: mlo:mlr9321 integrase/recombinase; Belongs to the 'phage' integrase family.


ensembl_gene_id: Bphy_4904
symbol: Bphy_4904
gene_biotype: protein_coding
description:
  PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bvi:Bcep1808_4315 IstB domain protein ATP-binding protein.


ensembl_gene_id: Bphy_4906
symbol: Bphy_4906
gene_biotype: protein_coding
description:
  PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro03215 probable aromatic acid transporter, MFS superfamily.


ensembl_gene_id: Bphy_4909
symbol: Bphy_4909
gene_biotype: protein_coding
description:
  PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pnu:Pnuc_1724 oxidoreductase FAD/NAD(P)-binding domain protein.


ensembl_gene_id: Bphy_4910
symbol: Bphy_4910
gene_biotype: protein_coding
description:
  PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: nar:Saro_2450 alcohol dehydrogenase superfamily, zinc-containing.


ensembl_gene_id: Bphy_4913
symbol: Bphy_4913
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_6030 transcriptional regulator, AraC family.


ensembl_gene_id: Bphy_4917
symbol: Bphy_4917
gene_biotype: protein_coding
description:
  PFAM: transposase IS3/IS911 family protein; KEGG: bvi:Bcep1808_6924 transposase IS3/IS911 family protein.


ensembl_gene_id: Bphy_4922
symbol: Bphy_4922
gene_biotype: protein_coding
description:
  PFAM: Thiolase; KEGG: acr:Acry_2397 propanoyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Bphy_4923
symbol: Bphy_4923
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B0242 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_4924
symbol: Bphy_4924
gene_biotype: protein_coding
description:
  PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: dac:Daci_5646 short-chain dehydrogenase/reductase SDR.


ensembl_gene_id: Bphy_4926
symbol: Bphy_4926
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc2352 probable permease transmembrane protein.


ensembl_gene_id: Bphy_4927
symbol: Bphy_4927
gene_biotype: protein_coding
description:
  PFAM: glycerate kinase; KEGG: bpl:BURPS1106A_A0173 glycerate kinase; Belongs to the glycerate kinase type-1 family.


ensembl_gene_id: Bphy_4928
symbol: Bphy_4928
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reu:Reut_C5961 regulatory protein, LysR:LysR, substrate-binding; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: Bphy_4929
symbol: Bphy_4929
gene_biotype: protein_coding
description:
  TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: reu:Reut_C5960 methylmalonate-semialdehyde dehydrogenase.


ensembl_gene_id: Bphy_4930
symbol: Bphy_4930
gene_biotype: protein_coding
description:
  PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: reu:Reut_C5959 zinc-containing alcohol dehydrogenase superfamily.


ensembl_gene_id: Bphy_4931
symbol: Bphy_4931
gene_biotype: protein_coding
description:
  KEGG: reu:Reut_C5958 3-hydroxyisobutyrate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; Belongs to the HIBADH-related family.


ensembl_gene_id: Bphy_4935
symbol: Bphy_4935
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: xcb:XC_4021 transcriptional regulator.


ensembl_gene_id: Bphy_4938
symbol: Bphy_4938
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_C6649 transcriptional regulator, AraC family.


ensembl_gene_id: Bphy_4939
symbol: Bphy_4939
gene_biotype: protein_coding
description:
  PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_C6650 AMP-dependent synthetase and ligase.


ensembl_gene_id: Bphy_4940
symbol: Bphy_4940
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_C6651 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Bphy_4941
symbol: Bphy_4941
gene_biotype: protein_coding
description:
  KEGG: bur:Bcep18194_C6652 acetyl-CoA C-acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Bphy_4943
symbol: Bphy_4943
gene_biotype: protein_coding
description:
  PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mfa:Mfla_0352 methyl-accepting chemotaxis sensory transducer.


ensembl_gene_id: Bphy_4944
symbol: Bphy_4944
gene_biotype: protein_coding
description:
  PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bte:BTH_II0051 4-hydroxybenzoate transporter.


ensembl_gene_id: Bphy_4945
symbol: Bphy_4945
gene_biotype: protein_coding
description:
  PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bxe:Bxe_B2583 putative CaiB/BaiF family protein; Belongs to the CoA-transferase III family.


ensembl_gene_id: Bphy_4946
symbol: Bphy_4946
gene_biotype: protein_coding
description:
  PFAM: HpcH/HpaI aldolase; KEGG: bvi:Bcep1808_5394 HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.


ensembl_gene_id: Bphy_4948
symbol: Bphy_4948
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reh:H16_B1834 alcohol dehydrogenase.


ensembl_gene_id: Bphy_4949
symbol: Bphy_4949
gene_biotype: protein_coding
description:
  PFAM: Aldehyde Dehydrogenase; KEGG: reh:H16_B1835 aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: Bphy_4950
symbol: Bphy_4950
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_6272 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_4956
symbol: Bphy_4956
gene_biotype: protein_coding
description:
  PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bxe:Bxe_C0488 putative transposase IS116/IS110/IS902.


ensembl_gene_id: Bphy_4967
symbol: Bphy_4967
gene_biotype: protein_coding
description:
  PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: rme:Rmet_5988 phage integrase-like SAM-like; Belongs to the 'phage' integrase family.


ensembl_gene_id: Bphy_4974
symbol: Bphy_4974
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B1909 transcriptional regulator, LysR-family.


ensembl_gene_id: Bphy_4977
symbol: Bphy_4977
gene_biotype: protein_coding
description:
  PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: mem:Memar_1561 AAA family ATPase, CDC48 subfamily.


ensembl_gene_id: Bphy_4985
symbol: Bphy_4985
gene_biotype: protein_coding
description:
  Transcriptional regulator, BadM/Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: pla:Plav_0970 transcriptional regulator, BadM/Rrf2 family.


ensembl_gene_id: Bphy_4986
symbol: Bphy_4986
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF1223; KEGG: bra:BRADO5149 conserved hypothetical protein; putative signal peptide.


ensembl_gene_id: Bphy_4988
symbol: Bphy_4988
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_4712 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_4989
symbol: Bphy_4989
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rme:Rmet_3889 transcriptional regulator, GntR family.


ensembl_gene_id: Bphy_4992
symbol: Bphy_4992
gene_biotype: protein_coding
description:
  Dihydropyrimidinase; KEGG: reu:Reut_A0045 dihydropyrimidinase; TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase; Amidohydrolase 3.


ensembl_gene_id: Bphy_4995
symbol: Bphy_4995
gene_biotype: protein_coding
description:
  PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bxe:Bxe_B2780 cold-shock DNA-binding domain protein.


ensembl_gene_id: Bphy_4998
symbol: Bphy_4998
gene_biotype: protein_coding
description:
  TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: reu:Reut_B4486 RND efflux system, outer membrane lipoprotein, NodT.


ensembl_gene_id: Bphy_5000
symbol: Bphy_5000
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: reu:Reut_B4488 major facilitator superfamily MFS_1.


ensembl_gene_id: Bphy_5003
symbol: Bphy_5003
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpt:Mpe_A3317 GstR-like transcriptional regulator protein.


ensembl_gene_id: Bphy_5004
symbol: Bphy_5004
gene_biotype: protein_coding
description:
  PFAM: Uracil-DNA glycosylase superfamily; KEGG: bur:Bcep18194_A6106 uracil-DNA glycosylase superfamily.


ensembl_gene_id: Bphy_5005
symbol: Bphy_5005
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: reu:Reut_B4484 helix-turn-helix, AraC type:ThiJ/PfpI.


ensembl_gene_id: Bphy_5007
symbol: Bphy_5007
gene_biotype: protein_coding
description:
  TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: reu:Reut_B4490 acetolactate synthase, large subunit, biosynthetic type.


ensembl_gene_id: Bphy_5009
symbol: Bphy_5009
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, ArsR family; SMART: regulatory protein ArsR; KEGG: psb:Psyr_4051 regulatory protein, ArsR.


ensembl_gene_id: Bphy_5012
symbol: Bphy_5012
gene_biotype: protein_coding
description:
  TIGRFAM: sulfate transporter; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; sulphate transporter; KEGG: rme:Rmet_3720 sulfate permease.


ensembl_gene_id: Bphy_5015
symbol: Bphy_5015
gene_biotype: protein_coding
description:
  TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; KEGG: reu:Reut_A1708 potassium efflux system protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: Bphy_5016
symbol: Bphy_5016
gene_biotype: protein_coding
description:
  TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; KEGG: reu:Reut_B5878 alanine dehydrogenase and pyridine nucleotide transhydrogenase; Belongs to the AlaDH/PNT family.


ensembl_gene_id: Bphy_5017
symbol: Bphy_5017
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF1109; KEGG: bxe:Bxe_A2181 putative transmembrane protein DUF1109.


ensembl_gene_id: Bphy_5018
symbol: Bphy_5018
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bpl:BURPS1106A_2035 RNA polymerase sigma-70 factor; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: Bphy_5020
symbol: Bphy_5020
gene_biotype: protein_coding
description:
  PFAM: oxidoreductase molybdopterin binding; KEGG: bxe:Bxe_A2177 putative oxidoreductase, molybdopterin binding.


ensembl_gene_id: Bphy_5022
symbol: Bphy_5022
gene_biotype: protein_coding
description:
  Methyltransferase type 11; PFAM: O-methyltransferase family 2; Methyltransferase type 11; Methyltransferase type 12; KEGG: mpt:Mpe_A0328 hypothetical protein.


ensembl_gene_id: Bphy_5025
symbol: Bphy_5025
gene_biotype: protein_coding
description:
  PFAM: cyclic nucleotide-binding; Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: mag:amb3535 sulfate permease and related transporters.


ensembl_gene_id: Bphy_5027
symbol: Bphy_5027
gene_biotype: protein_coding
description:
  TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: bch:Bcen2424_4423 diguanylate cyclase.


ensembl_gene_id: Bphy_5028
symbol: Bphy_5028
gene_biotype: protein_coding
description:
  TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: rso:RS01894 hypothetical protein.


ensembl_gene_id: Bphy_5030
symbol: Bphy_5030
gene_biotype: protein_coding
description:
  PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rso:RS01896 probable TonB-dependent receptor signal peptide protein.


ensembl_gene_id: Bphy_5033
symbol: Bphy_5033
gene_biotype: protein_coding
description:
  Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; cytochrome c biogenesis protein transmembrane region; Redoxin domain protein; KEGG: bch:Bcen2424_6244 cytochrome c biogenesis protein, transmembrane region.


ensembl_gene_id: Bphy_5037
symbol: ilvD-2
gene_biotype: protein_coding
description:
  KEGG: bch:Bcen2424_4135 dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; Belongs to the IlvD/Edd family.


ensembl_gene_id: Bphy_5040
symbol: Bphy_5040
gene_biotype: protein_coding
description:
  PFAM: NLPA lipoprotein; KEGG: bxe:Bxe_C0157 ABC methionine transporter, periplasmic ligand binding protein; Belongs to the nlpA lipoprotein family.


ensembl_gene_id: Bphy_5041
symbol: Bphy_5041
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF347; KEGG: bvi:Bcep1808_7223 protein of unknown function DUF347.


ensembl_gene_id: Bphy_5042
symbol: Bphy_5042
gene_biotype: protein_coding
description:
  PFAM: ATP-binding region ATPase domain protein; KEGG: bxe:Bxe_A0372 signal transduction histidine kinases (STHK).


ensembl_gene_id: Bphy_5043
symbol: Bphy_5043
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_5845 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_5044
symbol: Bphy_5044
gene_biotype: protein_coding
description:
  PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bam:Bamb_5081 acyl-CoA dehydrogenase domain protein.


ensembl_gene_id: Bphy_5045
symbol: Bphy_5045
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_B3037 short-chain dehydrogenase/reductase SDR.


ensembl_gene_id: Bphy_5046
symbol: Bphy_5046
gene_biotype: protein_coding
description:
  PFAM: aminoglycoside phosphotransferase; KEGG: bur:Bcep18194_B3038 aminoglycoside phosphotransferase.


ensembl_gene_id: Bphy_5049
symbol: Bphy_5049
gene_biotype: protein_coding
description:
  PFAM: regulatory protein AsnC/Lrp family; KEGG: bxe:Bxe_B1999 transcriptional regulator, AsnC family.


ensembl_gene_id: Bphy_5050
symbol: Bphy_5050
gene_biotype: protein_coding
description:
  PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bxe:Bxe_B1998 amino acid efflux pump, RhtB family, LysE superfamily.


ensembl_gene_id: Bphy_5053
symbol: Bphy_5053
gene_biotype: protein_coding
description:
  PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bcn:Bcen_0479 hypothetical protein.


ensembl_gene_id: Bphy_5063
symbol: Bphy_5063
gene_biotype: protein_coding
description:
  Transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: bxe:Bxe_B1877 transcriptional regulator, DeoR family.


ensembl_gene_id: Bphy_5064
symbol: phnW-2
gene_biotype: protein_coding
description:
  2-aminoethylphosphonate--pyruvate transaminase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily.


ensembl_gene_id: Bphy_5065
symbol: Bphy_5065
gene_biotype: protein_coding
description:
  TIGRFAM: 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_B1875 ABC transporter, periplasmic ligand binding protein.


ensembl_gene_id: Bphy_5066
symbol: Bphy_5066
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_B1874 ABC transporter, ATPase subunit; TIGRFAM: 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.


ensembl_gene_id: Bphy_5067
symbol: Bphy_5067
gene_biotype: protein_coding
description:
  TIGRFAM: 2-aminoethylphosphonate ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1873 ABC transporter, inner membrane subunit.


ensembl_gene_id: Bphy_5068
symbol: Bphy_5068
gene_biotype: protein_coding
description:
  TIGRFAM: 2-aminoethylphosphonate ABC transport system, membrane component PhnV; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1872 ABC transporter, inner membrane subunit.


ensembl_gene_id: Bphy_5069
symbol: Bphy_5069
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family; TIGRFAM: phosphonate utilization associated transcriptional regulator; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bxe:Bxe_B1871 transcriptional regulator, GntR family.


ensembl_gene_id: Bphy_5070
symbol: Bphy_5070
gene_biotype: protein_coding
description:
  TIGRFAM: phosphonoacetate hydrolase; PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: bxe:Bxe_B1870 putative phosphonoacetate hydrolase.


ensembl_gene_id: Bphy_5071
symbol: Bphy_5071
gene_biotype: protein_coding
description:
  TIGRFAM: phosphonoacetaldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: bxe:Bxe_B1869 putative NADP-dependentglyceraldehyde-3-phosphate dehydrogenase; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: Bphy_5074
symbol: Bphy_5074
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B1864 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_5077
symbol: Bphy_5077
gene_biotype: protein_coding
description:
  Succinate CoA transferase; KEGG: bxe:Bxe_B1860 acetyl-CoA hydrolase; TIGRFAM: succinate CoA transferase; PFAM: acetyl-CoA hydrolase/transferase.


ensembl_gene_id: Bphy_5081
symbol: Bphy_5081
gene_biotype: protein_coding
description:
  TIGRFAM: malonate decarboxylase, epsilon subunit; PFAM: Acyl transferase; KEGG: bxe:Bxe_B1850 putative acyl transferase.


ensembl_gene_id: Bphy_5083
symbol: Bphy_5083
gene_biotype: protein_coding
description:
  TIGRFAM: malonate decarboxylase, gamma subunit; PFAM: malonate decarboxylase gamma subunit; KEGG: bxe:Bxe_B1848 putative malonate decarboxylase gamma subunit.


ensembl_gene_id: Bphy_5084
symbol: Bphy_5084
gene_biotype: protein_coding
description:
  TIGRFAM: malonate decarboxylase, beta subunit; KEGG: bxe:Bxe_B1847 malonate decarboxylase, beta subunit.


ensembl_gene_id: Bphy_5085
symbol: Bphy_5085
gene_biotype: protein_coding
description:
  TIGRFAM: malonate decarboxylase acyl carrier protein; PFAM: malonate decarboxylase delta subunit; KEGG: bxe:Bxe_B1846 putative malonate decarboxylase delta subunit.


ensembl_gene_id: Bphy_5086
symbol: mdcB
gene_biotype: protein_coding
description:
  triphosphoribosyl-dephospho-CoA synthase MdcB; Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase; Belongs to the CitG/MdcB family.


ensembl_gene_id: Bphy_5087
symbol: Bphy_5087
gene_biotype: protein_coding
description:
  TIGRFAM: malonate decarboxylase, alpha subunit; KEGG: bxe:Bxe_B1844 malonate decarboxylase alpha subunit.


ensembl_gene_id: Bphy_5088
symbol: Bphy_5088
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bxe:Bxe_B1843 transcriptional regulator, GntR family.


ensembl_gene_id: Bphy_5089
symbol: Bphy_5089
gene_biotype: protein_coding
description:
  PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B1842 major facilitator superfamily (MFS)metabolite/H+ symporter.


ensembl_gene_id: Bphy_5090
symbol: Bphy_5090
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF6 transmembrane; KEGG: bxe:Bxe_B1839 putative 10 TMS drug/metabolite exporter, DME family, DMT super family.


ensembl_gene_id: Bphy_5091
symbol: Bphy_5091
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B1838 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_5093
symbol: Bphy_5093
gene_biotype: protein_coding
description:
  PFAM: N-acetyltransferase; KEGG: bxe:Bxe_B1830 N-hydroxyarylamine O-acetyltransferase; Belongs to the arylamine N-acetyltransferase family.


ensembl_gene_id: Bphy_5095
symbol: Bphy_5095
gene_biotype: protein_coding
description:
  PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bxe:Bxe_B2374 putative pyruvate dehydrogenase; Belongs to the TPP enzyme family.


ensembl_gene_id: Bphy_5100
symbol: Bphy_5100
gene_biotype: protein_coding
description:
  PFAM: extracellular solute-binding protein family 3; KEGG: bxe:Bxe_B1829 ABC amino acid transporter, periplasmic ligand binding protein.


ensembl_gene_id: Bphy_5101
symbol: Bphy_5101
gene_biotype: protein_coding
description:
  TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1828 ABC amino acid transporter, inner membrane subunit.


ensembl_gene_id: Bphy_5102
symbol: Bphy_5102
gene_biotype: protein_coding
description:
  TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1827 ABC amino acid transporter, inner membrane subunit.


ensembl_gene_id: Bphy_5103
symbol: Bphy_5103
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B1826 ABC amino acid transporter, ATPase subunit.


ensembl_gene_id: Bphy_5105
symbol: Bphy_5105
gene_biotype: protein_coding
description:
  Transcriptional regulator, histidine utilization repressor, GntR family; TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bxe:Bxe_B1824 transcriptional regulator, GntR family.


ensembl_gene_id: Bphy_5106
symbol: Bphy_5106
gene_biotype: protein_coding
description:
  Transcriptional regulator, histidine utilization repressor, GntR family; TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bxe:Bxe_B1823 transcriptional regulator, histidine utilization repressor, GntR family.


ensembl_gene_id: Bphy_5107
symbol: Bphy_5107
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B1822 ABC amino acid transporter, ATPase subunit.


ensembl_gene_id: Bphy_5108
symbol: Bphy_5108
gene_biotype: protein_coding
description:
  TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1821 ABC amino acid transporter, inner membrane subunit.


ensembl_gene_id: Bphy_5109
symbol: Bphy_5109
gene_biotype: protein_coding
description:
  TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1820 ABC amino acid transporter, inner membrane subunit.


ensembl_gene_id: Bphy_5110
symbol: Bphy_5110
gene_biotype: protein_coding
description:
  PFAM: extracellular solute-binding protein family 3; KEGG: bxe:Bxe_B1819 ABC amino acid transporter, periplasmic ligand binding protein.


ensembl_gene_id: Bphy_5111
symbol: Bphy_5111
gene_biotype: protein_coding
description:
  PFAM: 2OG-Fe(II) oxygenase; KEGG: bxe:Bxe_B1818 putative oxidoreductase; Belongs to the iron/ascorbate-dependent oxidoreductase family.


ensembl_gene_id: Bphy_5113
symbol: Bphy_5113
gene_biotype: protein_coding
description:
  PFAM: glucose-methanol-choline oxidoreductase; KEGG: bxe:Bxe_B1816 hypothetical protein; Belongs to the GMC oxidoreductase family.


ensembl_gene_id: Bphy_5115
symbol: Bphy_5115
gene_biotype: protein_coding
description:
  Integral membrane sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_B1814 periplasmic sensor hybrid histidine kinase.


ensembl_gene_id: Bphy_5117
symbol: Bphy_5117
gene_biotype: protein_coding
description:
  PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bxe:Bxe_B1813 two component transcriptional regulator, LuxR family.


ensembl_gene_id: Bphy_5119
symbol: Bphy_5119
gene_biotype: protein_coding
description:
  TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: bxe:Bxe_B1811 cytochrome bd ubiquinol oxidase, subunit II.


ensembl_gene_id: Bphy_5120
symbol: Bphy_5120
gene_biotype: protein_coding
description:
  PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: bxe:Bxe_B1810 putative cytochrome oxidase subunit I.


ensembl_gene_id: Bphy_5121
symbol: Bphy_5121
gene_biotype: protein_coding
description:
  PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: bxe:Bxe_B1078 nucleobase/cation symporter, (NCS2) family.


ensembl_gene_id: Bphy_5125
symbol: Bphy_5125
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_B1083 transcriptional regulator, AraC family.


ensembl_gene_id: Bphy_5126
symbol: Bphy_5126
gene_biotype: protein_coding
description:
  PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_B1084 butyryl-CoA dehydrogenase.


ensembl_gene_id: Bphy_5128
symbol: Bphy_5128
gene_biotype: protein_coding
description:
  TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: bxe:Bxe_B1086 methylmalonate-semialdehyde dehydrogenase.


ensembl_gene_id: Bphy_5129
symbol: Bphy_5129
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_B1087 3-hydroxyisobutyrate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; Belongs to the HIBADH-related family.


ensembl_gene_id: Bphy_5130
symbol: Bphy_5130
gene_biotype: protein_coding
description:
  PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bxe:Bxe_B1088 enoyl-CoA hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Bphy_5133
symbol: Bphy_5133
gene_biotype: protein_coding
description:
  PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: bxe:Bxe_C1224 putative oxidoreductase, molybopterin binding subunit.


ensembl_gene_id: Bphy_5134
symbol: Bphy_5134
gene_biotype: protein_coding
description:
  PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bxe:Bxe_C1225 putative xanthene dehydrogenase.


ensembl_gene_id: Bphy_5135
symbol: Bphy_5135
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B1090 major facilitator superfamily (MFS) transporter.


ensembl_gene_id: Bphy_5136
symbol: Bphy_5136
gene_biotype: protein_coding
description:
  PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: bxe:Bxe_B1091 putative iron transport/utilisation related protein.


ensembl_gene_id: Bphy_5137
symbol: Bphy_5137
gene_biotype: protein_coding
description:
  PFAM: transcriptional regulator PadR family protein; KEGG: bxe:Bxe_B1092 transcriptional regulator, PadR-like family.


ensembl_gene_id: Bphy_5139
symbol: Bphy_5139
gene_biotype: protein_coding
description:
  TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: bvi:Bcep1808_7477 chromate transporter, chromate ion transporter (CHR) family.


ensembl_gene_id: Bphy_5142
symbol: Bphy_5142
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: bpd:BURPS668_A0081 transporter, major facilitator family.


ensembl_gene_id: Bphy_5144
symbol: Bphy_5144
gene_biotype: protein_coding
description:
  PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_B0598 homoserine O-acetyltransferase; Belongs to the AB hydrolase superfamily. MetX family.


ensembl_gene_id: Bphy_5145
symbol: Bphy_5145
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_B0599 ABC polar amino acid family transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; ABC transporter related; SMART: AAA ATPase.


ensembl_gene_id: Bphy_5146
symbol: Bphy_5146
gene_biotype: protein_coding
description:
  PFAM: extracellular solute-binding protein family 3; KEGG: bxe:Bxe_B0600 ABC amino acid transporter, periplasmic ligand binding protein.


ensembl_gene_id: Bphy_5148
symbol: Bphy_5148
gene_biotype: protein_coding
description:
  PFAM: helix-turn-helix- domain containing protein AraC type; Acetamidase/Formamidase; KEGG: bxe:Bxe_B0602 transcriptional regulator, AraC family with acetamidase/formamidase activity.


ensembl_gene_id: Bphy_5150
symbol: Bphy_5150
gene_biotype: protein_coding
description:
  PFAM: extracellular solute-binding protein family 3; KEGG: bbt:BBta_6504 putative ABC transporter (substrate binding protein); Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: Bphy_5151
symbol: Bphy_5151
gene_biotype: protein_coding
description:
  KEGG: bbt:BBta_6505 putative ABC transporter (ATP-binding/permease protein); TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; ABC transporter related; SMART: AAA ATPase.


ensembl_gene_id: Bphy_5153
symbol: Bphy_5153
gene_biotype: protein_coding
description:
  PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bch:Bcen2424_6710 GntR domain protein.


ensembl_gene_id: Bphy_5154
symbol: Bphy_5154
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1357 major facilitator superfamily (MFS_1) transporter.


ensembl_gene_id: Bphy_5155
symbol: Bphy_5155
gene_biotype: protein_coding
description:
  PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; KEGG: reh:H16_A2758 altronate dehydratase.


ensembl_gene_id: Bphy_5156
symbol: Bphy_5156
gene_biotype: protein_coding
description:
  L-lactate dehydrogenase (cytochrome); PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: csa:Csal_1075 (S)-2-hydroxy-acid oxidase.


ensembl_gene_id: Bphy_5158
symbol: Bphy_5158
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bra:BRADO1928 putative ribose transport ATP-binding protein (RbsA).


ensembl_gene_id: Bphy_5159
symbol: Bphy_5159
gene_biotype: protein_coding
description:
  PFAM: inner-membrane translocator; KEGG: sme:SMa0198 putative ABC transporter, permease; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Bphy_5160
symbol: Bphy_5160
gene_biotype: protein_coding
description:
  PFAM: inner-membrane translocator; KEGG: mlo:mll4201 ribose ABC transporter (permease); Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Bphy_5161
symbol: Bphy_5161
gene_biotype: protein_coding
description:
  Gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: atc:AGR_L_1647 possible gluconolactonase precursor.


ensembl_gene_id: Bphy_5164
symbol: Bphy_5164
gene_biotype: protein_coding
description:
  PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bxe:Bxe_B2665 hypothetical protein.


ensembl_gene_id: Bphy_5166
symbol: Bphy_5166
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B2666 transcriptional regulator, LysR family.


ensembl_gene_id: Bphy_5169
symbol: Bphy_5169
gene_biotype: protein_coding
description:
  PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bxe:Bxe_A2061 putative cold shock transcriptional regulator, CspD.


ensembl_gene_id: Bphy_5171
symbol: Bphy_5171
gene_biotype: protein_coding
description:
  Histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_A0241 signal transduction histidine kinases (STHK).


ensembl_gene_id: Bphy_5175
symbol: Bphy_5175
gene_biotype: protein_coding
description:
  PFAM: CheB methylesterase; MCP methyltransferase CheR-type; KEGG: reu:Reut_B5191 CheB methylesterase:MCP methyltransferase, CheR-type.


ensembl_gene_id: Bphy_5177
symbol: Bphy_5177
gene_biotype: protein_coding
description:
  PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: msm:MSMEG_4138 aliphatic nitrilase.


ensembl_gene_id: Bphy_5179
symbol: Bphy_5179
gene_biotype: protein_coding
description:
  TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bte:BTH_II1127 GGDEF domain protein.


ensembl_gene_id: Bphy_5181
symbol: Bphy_5181
gene_biotype: protein_coding
description:
  PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; sterile alpha motif SAM protein; Sterile alpha motif homology 2; KEGG: sme:SMa1591 putative adenylate cyclase.


ensembl_gene_id: Bphy_5184
symbol: Bphy_5184
gene_biotype: protein_coding
description:
  KEGG: bvi:Bcep1808_5667 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.


ensembl_gene_id: Bphy_5188
symbol: Bphy_5188
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF6 transmembrane; KEGG: rfr:Rfer_3237 protein of unknown function DUF6, transmembrane.


ensembl_gene_id: Bphy_5189
symbol: Bphy_5189
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: bpd:BURPS668_A1884 major facilitator family transporter.


ensembl_gene_id: Bphy_5190
symbol: Bphy_5190
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bpd:BURPS668_A1885 transcriptional regulator, GntR family.


ensembl_gene_id: Bphy_5191
symbol: Bphy_5191
gene_biotype: protein_coding
description:
  PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bte:BTH_II1095 major facilitator family transporter.


ensembl_gene_id: Bphy_5193
symbol: Bphy_5193
gene_biotype: protein_coding
description:
  PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: bur:Bcep18194_C7264 DEAD/DEAH box helicase; Belongs to the DEAD box helicase family.


ensembl_gene_id: Bphy_5195
symbol: Bphy_5195
gene_biotype: protein_coding
description:
  TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B1129 major facilitator superfamily (MFS) multidrug efflux pump, EmrB/QacA subfamily.


ensembl_gene_id: Bphy_5201
symbol: Bphy_5201
gene_biotype: protein_coding
description:
  PFAM: dienelactone hydrolase; phospholipase/Carboxylesterase; KEGG: bxe:Bxe_B1130 putative hydrolase YpfH.


ensembl_gene_id: Bphy_5202
symbol: Bphy_5202
gene_biotype: protein_coding
description:
  TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell division protein FtsA; cell shape determining protein MreB/Mrl; KEGG: bxe:Bxe_B1131 cell shape determining protein MreB/Mrl.


ensembl_gene_id: Bphy_5205
symbol: Bphy_5205
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_B1134 citrate synthase I; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; Belongs to the citrate synthase family.


ensembl_gene_id: Bphy_5209
symbol: Bphy_5209
gene_biotype: protein_coding
description:
  PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: reu:Reut_B4422 TPR repeat.


ensembl_gene_id: Bphy_5215
symbol: Bphy_5215
gene_biotype: protein_coding
description:
  PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: bvi:Bcep1808_5499 metal dependent phosphohydrolase.


ensembl_gene_id: Bphy_5218
symbol: Bphy_5218
gene_biotype: protein_coding
description:
  Transcriptional regulator, RpiR family; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bxe:Bxe_B1140 transcriptional regulator, RpiR family.


ensembl_gene_id: Bphy_5219
symbol: Bphy_5219
gene_biotype: protein_coding
description:
  PFAM: peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; KEGG: bxe:Bxe_B1141 hypothetical protein.


ensembl_gene_id: Bphy_5220
symbol: Bphy_5220
gene_biotype: protein_coding
description:
  PFAM: aminotransferase class-III; KEGG: bxe:Bxe_B1142 aminotransferase, class III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: Bphy_5225
symbol: Bphy_5225
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_C7038 major facilitator superfamily (MFS_1) transporter.


ensembl_gene_id: Bphy_5226
symbol: Bphy_5226
gene_biotype: protein_coding
description:
  TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: bcn:Bcen_1065 ABC transporter, substrate-binding protein, aliphatic sulphonates.


ensembl_gene_id: Bphy_5227
symbol: Bphy_5227
gene_biotype: protein_coding
description:
  PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bam:Bamb_3433 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein.


ensembl_gene_id: Bphy_5229
symbol: Bphy_5229
gene_biotype: protein_coding
description:
  TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: bja:bll6450 probable substrate-binding protein.


ensembl_gene_id: Bphy_5232
symbol: Bphy_5232
gene_biotype: protein_coding
description:
  PFAM: Rhodanese domain protein; KEGG: bxe:Bxe_A2930 putative thiosulfate sulfurtransferase, rhodanese domain-containing.


ensembl_gene_id: Bphy_5234
symbol: Bphy_5234
gene_biotype: protein_coding
description:
  PFAM: class II aldolase/adducin family protein; KEGG: bam:Bamb_3679 class II aldolase/adducin family protein.


ensembl_gene_id: Bphy_5235
symbol: Bphy_5235
gene_biotype: protein_coding
description:
  Alkanesulfonate monooxygenase; PFAM: luciferase family protein; KEGG: reh:H16_B1865 alkanesulfonate monooxygenase.


ensembl_gene_id: Bphy_5237
symbol: Bphy_5237
gene_biotype: protein_coding
description:
  PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: bja:bll0902 putative trehalose synthase protein.


ensembl_gene_id: Bphy_5238
symbol: Bphy_5238
gene_biotype: protein_coding
description:
  PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: mes:Meso_3687 alpha amylase, catalytic region.


ensembl_gene_id: Bphy_5239
symbol: Bphy_5239
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_B1311 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.


ensembl_gene_id: Bphy_5242
symbol: Bphy_5242
gene_biotype: protein_coding
description:
  PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bxe:Bxe_B0832 putative oxidoreductase.


ensembl_gene_id: Bphy_5243
symbol: Bphy_5243
gene_biotype: protein_coding
description:
  PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bmn:BMA10247_A2263 NAD-dependent epimerase/dehydratase family protein.


ensembl_gene_id: Bphy_5246
symbol: Bphy_5246
gene_biotype: protein_coding
description:
  PFAM: glycosyl transferase family 2; KEGG: bpd:BURPS668_A3168 glycosyl transferase, group 2 family protein.


ensembl_gene_id: Bphy_5249
symbol: Bphy_5249
gene_biotype: protein_coding
description:
  Hydrolase, HAD-superfamily, subfamily IIIA; TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: azo:azo1807 heptose phosphatase.


ensembl_gene_id: Bphy_5251
symbol: Bphy_5251
gene_biotype: protein_coding
description:
  PFAM: ABC transporter transmembrane region; response regulator receiver; ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_6441 response regulator receiver protein.


ensembl_gene_id: Bphy_5255
symbol: Bphy_5255
gene_biotype: protein_coding
description:
  PFAM: phosphatidylserine decarboxylase-related; KEGG: bxe:Bxe_C0076 putative phosphatidylserine decarboxylase; Belongs to the phosphatidylserine decarboxylase family.


ensembl_gene_id: Bphy_5257
symbol: Bphy_5257
gene_biotype: protein_coding
description:
  PFAM: natural resistance-associated macrophage protein; KEGG: bvi:Bcep1808_5219 natural resistance-associated macrophage protein.


ensembl_gene_id: Bphy_5258
symbol: Bphy_5258
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF330; KEGG: bvi:Bcep1808_5629 protein of unknown function DUF330.


ensembl_gene_id: Bphy_5261
symbol: Bphy_5261
gene_biotype: protein_coding
description:
  PFAM: heat shock protein Hsp20; KEGG: bxe:Bxe_A2601 putative small heat shock protein, HSP20 family; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: Bphy_5262
symbol: Bphy_5262
gene_biotype: protein_coding
description:
  PFAM: heat shock protein Hsp20; KEGG: bam:Bamb_6388 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: Bphy_5269
symbol: Bphy_5269
gene_biotype: protein_coding
description:
  PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bxe:Bxe_B2951 cold-shock DNA-binding domain protein.


ensembl_gene_id: Bphy_5274
symbol: Bphy_5274
gene_biotype: protein_coding
description:
  PFAM: alpha/beta hydrolase fold; Epoxide hydrolase domain protein; KEGG: bxe:Bxe_B1262 putative epoxide hydrolase.


ensembl_gene_id: Bphy_5277
symbol: Bphy_5277
gene_biotype: protein_coding
description:
  PFAM: Malate/L-lactate dehydrogenase; KEGG: bch:Bcen2424_4910 malate/L-lactate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family.


ensembl_gene_id: Bphy_5279
symbol: Bphy_5279
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_B1152 putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; SMART: PAS domain containing protein.


ensembl_gene_id: Bphy_5280
symbol: treA
gene_biotype: protein_coding
description:
  Alpha,alpha-trehalase; Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system.


ensembl_gene_id: Bphy_5281
symbol: Bphy_5281
gene_biotype: protein_coding
description:
  PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases; KEGG: bxe:Bxe_B1153 ATP-dependent helicase, DEAD/DEAH family.


ensembl_gene_id: Bphy_5294
symbol: Bphy_5294
gene_biotype: protein_coding
description:
  TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bxe:Bxe_B0822 HAD-superfamily hydrolase, subfamily IA, variant3.


ensembl_gene_id: Bphy_5298
symbol: Bphy_5298
gene_biotype: protein_coding
description:
  TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: bxe:Bxe_B1164 peptidase C56, PfpI.


ensembl_gene_id: Bphy_5303
symbol: Bphy_5303
gene_biotype: protein_coding
description:
  PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: bxe:Bxe_B1170 phospholipid binding protein.


ensembl_gene_id: Bphy_5308
symbol: Bphy_5308
gene_biotype: protein_coding
description:
  VRR-NUC domain protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.


ensembl_gene_id: Bphy_5309
symbol: Bphy_5309
gene_biotype: protein_coding
description:
  PFAM: DEAD_2 domain protein; SMART: Helicase-like, DEXD box c2 type; helicase c2; KEGG: bxe:Bxe_B1180 hypothetical protein.


ensembl_gene_id: Bphy_5313
symbol: Bphy_5313
gene_biotype: protein_coding
description:
  TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: reh:H16_B0288 MFS transporter, DHA2 family.


ensembl_gene_id: Bphy_5314
symbol: Bphy_5314
gene_biotype: protein_coding
description:
  Sigma54 specific transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: bxe:Bxe_B1183 sigma54 specific transcriptional regulator, fis family.


ensembl_gene_id: Bphy_5320
symbol: Bphy_5320
gene_biotype: protein_coding
description:
  TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: rso:RSc0656 probable pilus assembly transmembrane protein.


ensembl_gene_id: Bphy_5321
symbol: Bphy_5321
gene_biotype: protein_coding
description:
  PFAM: type II and III secretion system protein; transport-associated; KEGG: rso:RSc0655 probable outer membrane channel protein; Belongs to the bacterial secretin family.


ensembl_gene_id: Bphy_5329
symbol: Bphy_5329
gene_biotype: protein_coding
description:
  KEGG: bxe:Bxe_B1199 procollagen-proline,2-oxoglutarate-4-dioxygenase; PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit.


