# geneInfo

ensembl_gene_id: Q2QSB9
symbol: AMPL1_ORYSJ
gene_biotype: protein_coding
description:
  Putative leucine aminopeptidase 1; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides (By similarity). Belongs to the peptidase M17 family.


ensembl_gene_id: Q2QTC2
symbol: GWD3
gene_biotype: protein_coding
description:
  Phosphoglucan, water dikinase, chloroplastic; Mediates the incorporation of phosphate into starch-like phospho-alpha-glucan, mostly at the C-3 position of glucose units. May be required for starch degradation, suggesting that the phosphate content of starch regulates its degradability (By similarity).


ensembl_gene_id: Q2QTJ1
symbol: Q2QTJ1_ORYSJ
gene_biotype: protein_coding
description:
  Ribulose bisphosphate carboxylase small chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site.


ensembl_gene_id: Q2QTL0
symbol: NADA_ORYSJ
gene_biotype: protein_coding
description:
  Quinolinate synthase, chloroplastic; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate; Belongs to the quinolinate synthase A family. Type 1 subfamily.


ensembl_gene_id: Q2QU06
symbol: Q2QU06_ORYSJ
gene_biotype: protein_coding
description:
  RuBisCO subunit binding-protein alpha subunit, chloroplast, putative, expressed; Belongs to the chaperonin (HSP60) family.


ensembl_gene_id: Q2QUC5
symbol: CYP71P1
gene_biotype: protein_coding
description:
  Tryptamine 5-hydroxylase; Involved in serotonine biosynthesis. Catalyzes the conversion of tryptamine to serotonin. Accumulation of serotonin may play a role in innate immunity ; Belongs to the cytochrome P450 family.


ensembl_gene_id: Q2QUN2
symbol: LAC24
gene_biotype: protein_coding
description:
  Laccase-24; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family.


ensembl_gene_id: Q2QUS0
symbol: OSJNBa0036A15
gene_biotype: protein_coding
description:
  Probable staphylococcal-like nuclease CAN4; Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond.


ensembl_gene_id: Q2QV45
symbol: Q2QV45_ORYSJ
gene_biotype: protein_coding
description:
  Stromal 70 kDa heat shock-related protein, chloroplast, putative, expressed; Belongs to the heat shock protein 70 family.


ensembl_gene_id: Q2QV81
symbol: ABCG49
gene_biotype: protein_coding
description:
  ABC transporter G family member 49; May be a general defense protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.


ensembl_gene_id: Q2QV94
symbol: SEC10
gene_biotype: protein_coding
description:
  Exocyst complex component 5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane; Belongs to the SEC10 family.


ensembl_gene_id: Q2QVG8
symbol: CPK29
gene_biotype: protein_coding
description:
  Calcium-dependent protein kinase 29; May play a role in signal transduction pathways that involve calcium as a second messenger; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.


ensembl_gene_id: Q2QVG9
symbol: CLPC2
gene_biotype: protein_coding
description:
  Chaperone protein ClpC2, chloroplastic; Molecular chaperone that may interact with a ClpP-like protease involved in degradation of denatured proteins in the chloroplast; Belongs to the ClpA/ClpB family. ClpC subfamily.


ensembl_gene_id: Q2QVN9
symbol: Q2QVN9_ORYSJ
gene_biotype: protein_coding
description:
  Cytochrome b5-like Heme/Steroid binding domain containing protein, expressed; Belongs to the cytochrome b5 family.


ensembl_gene_id: Q2QWE9
symbol: SGS3
gene_biotype: protein_coding
description:
  Protein SUPPRESSOR OF GENE SILENCING 3 homolog; Required for post-transcriptional gene silencing and natural virus resistance; Belongs to the SGS3 family.


ensembl_gene_id: Q2QWK9
symbol: OsJ_35490
gene_biotype: protein_coding
description:
  Probable thiamine biosynthetic bifunctional enzyme, chloroplastic; Essential for thiamine biosynthesis. Bifunctional enzyme that catalyzes the phosphorylation of hydroxymethylpyrimidine phosphate (HMP-P) to HMP-PP and condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP).


ensembl_gene_id: Q2QWT4
symbol: DPNP_ORYSJ
gene_biotype: protein_coding
description:
  3'(2'),5'-bisphosphate nucleotidase; Converts adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) and 3'(2')-phosphoadenosine 5'- phosphate (PAP) to AMP. Regulates the flux of sulfur in the sulfur- activation pathway by converting PAPS to APS (By similarity). Belongs to the inositol monophosphatase superfamily.


ensembl_gene_id: Q2QWW7
symbol: PHT4;7
gene_biotype: protein_coding
description:
  Probable anion transporter 7; Probable anion transporter; Belongs to the major facilitator superfamily. Sodium/anion cotransporter (TC 2.A.1.14) family.


ensembl_gene_id: Q2QWW9
symbol: Q2QWW9_ORYSJ
gene_biotype: protein_coding
description:
  NAD-dependent protein deacylase; NAD-dependent protein deacylase. Catalyzes the NAD-dependent hydrolysis of acyl groups from lysine residues; Belongs to the sirtuin family. Class II subfamily.


ensembl_gene_id: Q2QWX8
symbol: SWEET7C
gene_biotype: protein_coding
description:
  Bidirectional sugar transporter SWEET7c; Mediates both low-affinity uptake and efflux of sugar across the plasma membrane.


ensembl_gene_id: Q2QX01
symbol: GRXS12
gene_biotype: protein_coding
description:
  Monothiol glutaredoxin-S12, chloroplastic; May only reduce GSH-thiol disulfides, but not protein disulfides; Belongs to the glutaredoxin family. CGFS subfamily.


ensembl_gene_id: Q2QX40
symbol: STAR3
gene_biotype: protein_coding
description:
  Zinc finger protein STAR3; Transcriptional activator that regulates the expression of genes involved in aluminum (Al) tolerance. Binds to the promoter of STAR1 and regulates transcript expression of STAR1 STAR2 and ART1 required for Al tolerance.


ensembl_gene_id: Q2QX45
symbol: CPK28
gene_biotype: protein_coding
description:
  Calcium-dependent protein kinase 28; May play a role in signal transduction pathways that involve calcium as a second messenger.


ensembl_gene_id: Q2QX91
symbol: Q2QX91_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:002-168-E05, full insert sequence; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: Q2QXB3
symbol: OsJ_35322
gene_biotype: protein_coding
description:
  Deoxyhypusine hydroxylase-A; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family.


ensembl_gene_id: Q2QXC6
symbol: WNK9
gene_biotype: protein_coding
description:
  Probable serine/threonine-protein kinase WNK9; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. WNK subfamily.


ensembl_gene_id: Q2QXJ0
symbol: OsJ_033900
gene_biotype: protein_coding
description:
  Putative germin-like protein 12-4; May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.


ensembl_gene_id: Q2QXJ1
symbol: OsJ_033899
gene_biotype: protein_coding
description:
  Putative germin-like protein 12-3; May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.


ensembl_gene_id: Q2QXJ2
symbol: OsJ_033898
gene_biotype: protein_coding
description:
  Germin-like protein 12-2; May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.


ensembl_gene_id: Q2QXJ4
symbol: OsJ_033897
gene_biotype: protein_coding
description:
  Germin-like protein 12-1; May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.


ensembl_gene_id: Q2QXL0
symbol: TGAL11
gene_biotype: protein_coding
description:
  Transcription factor TGAL11; Transcriptional regulator involved in defense response. Belongs to the bZIP family.


ensembl_gene_id: Q2QXP0
symbol: GT3
gene_biotype: protein_coding
description:
  Probable glycosyltransferase 3; Probable glycosyltransferase that may be involved in the biosynthesis of xyloglucan; Belongs to the glycosyltransferase 34 family.


ensembl_gene_id: Q2QXR8
symbol: OsJ_35209
gene_biotype: protein_coding
description:
  Pyruvate kinase 2, cytosolic; Key regulatory enzyme of the glycolytic pathway that catalyzes the final step of glycolysis, converting ADP and phosphoenolpyruvate (PEP) to ATP and pyruvate by essentially irreversible transphosphorylation.


ensembl_gene_id: Q2QXY1
symbol: GLDH2
gene_biotype: protein_coding
description:
  L-galactono-1,4-lactone dehydrogenase 2, mitochondrial; Involved in the biosynthesis of ascorbic acid.


ensembl_gene_id: Q2QXY3
symbol: RR10
gene_biotype: protein_coding
description:
  Two-component response regulator ORR10; Functions as response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Type-A response regulators seem to act as negative regulators of the cytokinin signaling.


ensembl_gene_id: Q2QXZ2
symbol: NH5.2
gene_biotype: protein_coding
description:
  BTB/POZ domain and ankyrin repeat-containing protein NH5.2; Involved in defense response against pathogens.


ensembl_gene_id: Q2QY04
symbol: TAP46
gene_biotype: protein_coding
description:
  PP2A regulatory subunit TAP46; Involved in the regulation of the TOR signaling pathway. Seems to act as a regulator of PP2A catalytic activity.


ensembl_gene_id: Q2QY07
symbol: CCDA2
gene_biotype: protein_coding
description:
  Cytochrome c-type biogenesis ccda-like chloroplastic protein 2; Probably involved in the transfer of reducing equivalents from stroma to thylakoid lumen and required for the biogenesis of the plastid cytochrome b6f complex; Belongs to the DsbD family.


ensembl_gene_id: Q2QY12
symbol: ACA9
gene_biotype: protein_coding
description:
  Probable calcium-transporting ATPase 9, plasma membrane-type; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles.


ensembl_gene_id: Q2QY18
symbol: Q2QY18_ORYSJ
gene_biotype: protein_coding
description:
  Ribosomal protein L24 containing protein, expressed; Belongs to the universal ribosomal protein uL24 family.


ensembl_gene_id: Q2QY37
symbol: CPK26
gene_biotype: protein_coding
description:
  Calcium-dependent protein kinase 26; May play a role in signal transduction pathways that involve calcium as a second messenger.


ensembl_gene_id: Q2QY53
symbol: CIPK32
gene_biotype: protein_coding
description:
  CBL-interacting protein kinase 32; CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity).


ensembl_gene_id: Q2QYE1
symbol: APY3
gene_biotype: protein_coding
description:
  Probable apyrase 3; Catalyzes the hydrolysis of phosphoanhydride bonds of nucleoside tri- and di-phosphates; Belongs to the GDA1/CD39 NTPase family.


ensembl_gene_id: Q2QYE4
symbol: Q2QYE4_ORYSJ
gene_biotype: protein_coding
description:
  Glutathione S-transferase, C-terminal domain containing protein, expressed; Belongs to the GST superfamily.


ensembl_gene_id: Q2QYF3
symbol: SCR2
gene_biotype: protein_coding
description:
  Protein SCARECROW 2; Probable transcription factor involved in asmmetric cell division in the cortex/endodermis progenitor cell and in the process of stomata and ligule formation in leaves; Belongs to the GRAS family.


ensembl_gene_id: Q2QYH7
symbol: CYP714C2
gene_biotype: protein_coding
description:
  Cytochrome P450 714C2; Probably not involved in gibberellin metabolism since over- expression of CYP714C2 in a heterologous system does not induce semi- dwarfism.


ensembl_gene_id: Q2QYL2
symbol: LTP2-B
gene_biotype: protein_coding
description:
  Non-specific lipid-transfer protein 2B; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.


ensembl_gene_id: Q2QYL3
symbol: LTP110-A
gene_biotype: protein_coding
description:
  Non-specific lipid-transfer protein 3; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues. May possess an antifungal activity and protect the plant against pathogens.


ensembl_gene_id: Q2QYL8
symbol: WNK8
gene_biotype: protein_coding
description:
  Probable serine/threonine-protein kinase WNK8; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. WNK subfamily.


ensembl_gene_id: Q2QYM3
symbol: CIPK14
gene_biotype: protein_coding
description:
  CBL-interacting protein kinase 14; CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity).


ensembl_gene_id: Q2QYR1
symbol: OSJNBa0024J08
gene_biotype: protein_coding
description:
  Probable staphylococcal-like nuclease CAN3; Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond.


ensembl_gene_id: Q2QYR5
symbol: DRM1B
gene_biotype: protein_coding
description:
  Probable inactive DNA (cytosine-5)-methyltransferase DRM1B; Involved in de novo DNA methylation. Involved in RNA-directed DNA methylation (RdDM); Belongs to the class I-like SAM-binding methyltransferase superfamily. DRM-methyltransferase family.


ensembl_gene_id: Q2QYS3
symbol: LAC23
gene_biotype: protein_coding
description:
  Laccase-23; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family.


ensembl_gene_id: Q2QYW2
symbol: CLH2_ORYSJ
gene_biotype: protein_coding
description:
  Clathrin heavy chain 2; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles.


ensembl_gene_id: Q2QYW5
symbol: D53-L
gene_biotype: protein_coding
description:
  Protein DWARF 53-LIKE; Repressor of strigolactones (SL) signaling. Subjected to a negative feedback control of SL signaling.


ensembl_gene_id: Q2QYX8
symbol: Q2QYX8_ORYSJ
gene_biotype: protein_coding
description:
  Mitochondrial substrate carrier family protein, putative, expressed; Belongs to the mitochondrial carrier (TC 2.A.29) family.


ensembl_gene_id: Q2QYY8
symbol: PHOT1A
gene_biotype: protein_coding
description:
  Phototropin-1A; Protein kinase that acts as a blue light photoreceptor in a signal-transduction pathway for phototropic responses. Regulates a wide range of physiological activities in plants that maximize the efficiency of photosynthesis, such as chloroplast relocations, stomata opening, and leaf expansion (By similarity).


ensembl_gene_id: Q2QZ12
symbol: Q2QZ12_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:006-302-D12, full insert sequence; Belongs to the mitochondrial carrier (TC 2.A.29) family.


ensembl_gene_id: Q2QZ14
symbol: GL1-11
gene_biotype: protein_coding
description:
  Very-long-chain aldehyde decarbonylase GL1-11; Aldehyde decarbonylase involved in the conversion of aldehydes to alkanes. Core component of a very-long-chain alkane synthesis complex.


ensembl_gene_id: Q2QZ37
symbol: OBGM
gene_biotype: protein_coding
description:
  Probable GTP-binding protein OBGM, mitochondrial; May bind GTP and have GTPase activity; Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: Q2QZ80
symbol: LAC21
gene_biotype: protein_coding
description:
  Laccase-21; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family.


ensembl_gene_id: Q2QZ86
symbol: ACLA-2
gene_biotype: protein_coding
description:
  ATP-citrate synthase alpha chain protein 2; ATP citrate-lyase is the primary enzyme responsible for the synthesis of cytosolic acetyl-CoA, used for the elongation of fatty acids and biosynthesis of isoprenoids, flavonoids and malonated derivatives. May supply substrate to the cytosolic acetyl-CoA carboxylase, which generates the malonyl-CoA used for the synthesis of a multitude of compounds, including very long chain fatty acids and flavonoids. In contrast to all known animal ACL enzymes having a homomeric structure, plant ACLs are composed of alpha and beta chains (By similarity); Bel [...]


ensembl_gene_id: Q2QZF1
symbol: PIK6-NP
gene_biotype: protein_coding
description:
  Disease resistance protein PIK6-NP; Probable disease resistance protein. Resistance proteins guard the plant against pathogens that contain an appropriate avirulence protein via an indirect interaction with this avirulence protein. That triggers a defense system including the hypersensitive response, which restricts the pathogen growth. At the opposite of cultivar Kusabue, the cultivar Nipponbare doesn't recognize the effector avirulence protein AVR-Pik from M.oryzae.


ensembl_gene_id: Q2QZF2
symbol: PIK5-NP
gene_biotype: protein_coding
description:
  Disease resistance protein PIK5-NP; Probable disease resistance protein. Resistance proteins guard the plant against pathogens that contain an appropriate avirulence protein via an indirect interaction with this avirulence protein. That triggers a defense system including the hypersensitive response, which restricts the pathogen growth. At the opposite of cultivar Kusabue, the cultivar Nipponbare doesn't recognize the effector avirulence protein AVR-Pik from M.oryzae.


ensembl_gene_id: Q2QZJ8
symbol: JAMYB
gene_biotype: protein_coding
description:
  Transcription factor JAMYB; Probable transcription factor that may be involved in the jasmonate-dependent defense responses to the rice blast fungus Magnaporthe oryzae. Does not seem to function in the salicylic acid- dependent signaling pathway.


ensembl_gene_id: Q2R030
symbol: Q2R030_ORYSJ
gene_biotype: protein_coding
description:
  ADP,ATP carrier protein 2, mitochondrial, putative, expressed; Belongs to the mitochondrial carrier (TC 2.A.29) family.


ensembl_gene_id: Q2R041
symbol: MHX1
gene_biotype: protein_coding
description:
  Magnesium/proton exchanger 1; Vacuolar transporter that exchanges protons with Mg(2+), Zn(2+) and Fe(2+) ions. May control the partitioning of Mg(2+) and Zn(2+) between plant organs (By similarity); Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. MHX subfamily.


ensembl_gene_id: Q2R073
symbol: GRXC12
gene_biotype: protein_coding
description:
  Putative glutaredoxin-C12; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins (By similarity); Belongs to the glutaredoxin family. CC-type subfamily.


ensembl_gene_id: Q2R075
symbol: GRXC11
gene_biotype: protein_coding
description:
  Putative glutaredoxin-C11; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins (By similarity); Belongs to the glutaredoxin family. CC-type subfamily.


ensembl_gene_id: Q2R076
symbol: GRXC10
gene_biotype: protein_coding
description:
  Glutaredoxin-C10; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins (By similarity); Belongs to the glutaredoxin family. CC-type subfamily.


ensembl_gene_id: Q2R0J4
symbol: TBT2
gene_biotype: protein_coding
description:
  Tryptamine benzoyltransferase 2; Hydroxycinnamoyl transferase that catalyzes the transfer of an acyl from benzoyl-CoA to tryptamine, to produce benzoyl tryptamine. Serotonin and tyramine serve as acyl acceptors in vitro. Specific for benzoyl-CoA as acyl donor. Has no activity with p-coumaroyl-CoA, caffeoyl-CoA, or feruloyl-CoA as acyl donors. Belongs to the plant acyltransferase family.


ensembl_gene_id: Q2R0K3
symbol: TBT1
gene_biotype: protein_coding
description:
  Tryptamine benzoyltransferase 1; Hydroxycinnamoyl transferase that catalyzes the transfer of an acyl from benzoyl-CoA to tryptamine, to produce benzoyl tryptamine. Serotonin and tyramine serve as acyl acceptors in vitro. Can use p- coumaroyl-CoA, and to a lesser extent caffeoyl-CoA, as acyl donors. Belongs to the plant acyltransferase family.


ensembl_gene_id: Q2R0L0
symbol: LAC20
gene_biotype: protein_coding
description:
  Laccase-20; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family.


ensembl_gene_id: Q2R0L2
symbol: LAC19
gene_biotype: protein_coding
description:
  Laccase-19; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family.


ensembl_gene_id: Q2R0W8
symbol: OsJ_34517
gene_biotype: protein_coding
description:
  Protein SPIRAL1-like 2; Acts in maintaining the cortical microtubules organization essential for anisotropic cell growth.


ensembl_gene_id: Q2R0X3
symbol: Q2R0X3_ORYSJ
gene_biotype: protein_coding
description:
  Leucine Rich Repeat family protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q2R0Y6
symbol: Q2R0Y6_ORYSJ
gene_biotype: protein_coding
description:
  Leucine Rich Repeat family protein, expressed; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q2R114
symbol: CAD4
gene_biotype: protein_coding
description:
  Putative cinnamyl alcohol dehydrogenase 4; Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers. Catalyzes the NADPH- dependent reduction of coniferaldehyde, 5-hydroxyconiferaldehyde, sinapaldehyde, 4-coumaraldehyde and caffeyl aldehyde to their respective alcohols.


ensembl_gene_id: Q2R131
symbol: Q2R131_ORYSJ
gene_biotype: protein_coding
description:
  Sugar transporter, putative, expressed; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: Q2R1D5
symbol: GF14H
gene_biotype: protein_coding
description:
  Putative 14-3-3-like protein GF14-H; Is associated with a DNA binding complex that binds to the G box, a well-characterized cis-acting DNA regulatory element found in plant genes.


ensembl_gene_id: Q2R1F3
symbol: Q2R1F3_ORYSJ
gene_biotype: protein_coding
description:
  BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, putative, expressed; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q2R1J3
symbol: ILI2
gene_biotype: protein_coding
description:
  Transcription factor ILI2; Atypical and probable non DNA-binding bHLH transcription factor that integrates multiple signaling pathways to regulate cell elongation and plant development.


ensembl_gene_id: Q2R1J8
symbol: Q2R1J8_ORYSJ
gene_biotype: protein_coding
description:
  40S ribosomal protein S9, putative, expressed; Belongs to the universal ribosomal protein uS4 family.


ensembl_gene_id: Q2R1M8
symbol: RH52C_ORYSJ
gene_biotype: protein_coding
description:
  DEAD-box ATP-dependent RNA helicase 52C; Belongs to the DEAD box helicase family. DDX3/DED1 subfamily.


ensembl_gene_id: Q2R1U4
symbol: OsJ_34478
gene_biotype: protein_coding
description:
  CDK5RAP1-like protein; Potential regulator of CDK5 activity; Belongs to the methylthiotransferase family. MiaB subfamily.


ensembl_gene_id: Q2R1U8
symbol: CFM3
gene_biotype: protein_coding
description:
  CRM-domain containing factor CFM3, chloroplastic/mitochondrial; Binds specific group II introns in chloroplasts and facilitates their splicing. Acts on subgroup IIB introns. The substrates of the subgroup IIB also require the CRM domain proteins CAF1 or CAF2, with a simultaneous binding of CFM3 and CAF1 or CAF2. May influence the biogenesis of the mitochondrial small ribosomal subunit (By similarity).


ensembl_gene_id: Q2R1V8
symbol: GME-2
gene_biotype: protein_coding
description:
  GDP-mannose 3,5-epimerase 2; Catalyzes a reversible epimerization of GDP-D-mannose that precedes the committed step in the biosynthesis of vitamin C (L- ascorbate), resulting in the hydrolysis of the highly energetic glycosyl-pyrophosphoryl linkage. Able to catalyze 2 distinct epimerization reactions and can release both GDP-L-galactose and GDP-L- gulose from GDP-mannose (By similarity); Belongs to the NAD(P)-dependent epimerase/dehydratase family.


ensembl_gene_id: Q2R1Y6
symbol: Q2R1Y6_ORYSJ
gene_biotype: protein_coding
description:
  ADP-ribosylation factor-like protein 5, putative, expressed; Belongs to the small GTPase superfamily. Arf family.


ensembl_gene_id: Q2R222
symbol: C6
gene_biotype: protein_coding
description:
  Non-specific lipid-transfer protein C6; Lipid-transfer proteins that possesses lipid-binding activity in vitro. Involved in the development of lipidic orbicules/Ubisch bodies and pollen exine during anther development. May be regulated by the transcription factor UDT1 in developing anthers and play a role in tapetum development. Positively regulated by the transcription factor TDR in developing anthers and may play a role in tapetum programmed cell death (PCD).


ensembl_gene_id: Q2R224
symbol: OsJ_34384
gene_biotype: protein_coding
description:
  Protein ROOT HAIR DEFECTIVE 3 homolog 2; Probable GTP-binding protein that may be involved in cell development; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily.


ensembl_gene_id: Q2R237
symbol: TATB
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TATB, chloroplastic; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across the thylakoid membrane. Involved in delta pH-dependent protein transport required for chloroplast development, especially thylakoid membrane formation. TATC and TATB mediate precursor recognition, whereas TATA facilitates translocation.


ensembl_gene_id: Q2R242
symbol: Q2R242_ORYSJ
gene_biotype: protein_coding
description:
  H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine (psi) residues may serve to stabilize the conformation of rRNAs.


ensembl_gene_id: Q2R2B1
symbol: STLP5
gene_biotype: protein_coding
description:
  Sialyltransferase-like protein 5; May possess sialyltransferase-like activity in vitro. Belongs to the glycosyltransferase 29 family.


ensembl_gene_id: Q2R2B4
symbol: RFC1
gene_biotype: protein_coding
description:
  Replication factor C subunit 1; May be involved in DNA replication and thus regulate cell proliferation.


ensembl_gene_id: Q2R2D5
symbol: XA21
gene_biotype: protein_coding
description:
  Receptor kinase-like protein Xa21, processed; [Receptor kinase-like protein Xa21]: Receptor kinase that detects X.oryzae pv. oryzae protein Ax21 to promote innate immunity. Following X.oryzae pv. oryzae protein Ax21 detection, undergoes cleavage, releasing the processed protein kinase Xa21 chain.


ensembl_gene_id: Q2R2D7
symbol: Q2R2D7_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J013092C01, full insert sequence; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q2R2D8
symbol: Q2R2D8_ORYSJ
gene_biotype: protein_coding
description:
  Receptor kinase, putative, expressed; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q2R2G0
symbol: Q2R2G0_ORYSJ
gene_biotype: protein_coding
description:
  Chalcone and stilbene synthases, N-terminal domain containing protein, expressed; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.


ensembl_gene_id: Q2R2M0
symbol: Q2R2M0_ORYSJ
gene_biotype: protein_coding
description:
  Actin-related protein 2/3 complex subunit 5; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Arp2/3 complex plays a critical role in the control of cell morphogenesis via the modulation of cell polarity development.


ensembl_gene_id: Q2R2P7
symbol: KIN7L
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-7L; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-7 subfamily.


ensembl_gene_id: Q2R2R4
symbol: Q2R2R4_ORYSJ
gene_biotype: protein_coding
description:
  Stripe rust resistance protein Yr10, putative, expressed; Belongs to the disease resistance NB-LRR family.


ensembl_gene_id: Q2R2W1
symbol: ADO3_ORYSJ
gene_biotype: protein_coding
description:
  Adagio-like protein 3; Component of an E3 ubiquitin ligase complex that plays a central role in blue light-dependent circadian cycles. Acts as a blue light photoreceptor, due to the presence of FMN, that mediates light- regulated protein degradation of critical clock components by targeting them to the proteasome complex. The SCF(ADO3) E3 ubiquitin ligase complex is involved in the regulation of circadian clock-dependent processes including transition to flowering time, hypocotyl elongation, cotyledons and leaf movement rhythms (By similarity).


ensembl_gene_id: Q2R2W2
symbol: GF14D
gene_biotype: protein_coding
description:
  14-3-3-like protein GF14-D; Is associated with a DNA binding complex that binds to the G box, a well-characterized cis-acting DNA regulatory element found in plant genes; Belongs to the 14-3-3 family.


ensembl_gene_id: Q2R2W8
symbol: GT6
gene_biotype: protein_coding
description:
  Probable glycosyltransferase 6; Probable glycosyltransferase that may be involved in the biosynthesis of xyloglucan.


ensembl_gene_id: Q2R2Z0
symbol: GATB
gene_biotype: protein_coding
description:
  Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln).


ensembl_gene_id: Q2R333
symbol: Q2R333_ORYSJ
gene_biotype: protein_coding
description:
  O-methyltransferase family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.


ensembl_gene_id: Q2R352
symbol: OsJ_032823
gene_biotype: protein_coding
description:
  Germin-like protein 11-1; May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.


ensembl_gene_id: Q2R374
symbol: RBR2
gene_biotype: protein_coding
description:
  Retinoblastoma-related protein 2; Regulator of biological processes that recruits a histone deacetylase to control gene transcription. May play a role in the entry into mitosis, negatively regulating the cell proliferation. Formation of stable complexes with geminiviridae replication-associated proteins may create a cellular environment which favors viral DNA replication (By similarity).


ensembl_gene_id: Q2R3A1
symbol: CHS1
gene_biotype: protein_coding
description:
  Chalcone synthase 1; The primary product of this enzyme is 4,2',4',6'- tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.


ensembl_gene_id: Q2R3A5
symbol: Q2R3A5_ORYSJ
gene_biotype: protein_coding
description:
  Chalcone and stilbene synthases, N-terminal domain containing protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.


ensembl_gene_id: Q2R3B4
symbol: GH3.13
gene_biotype: protein_coding
description:
  Probable indole-3-acetic acid-amido synthetase GH3.13; May catalyze the synthesis of indole-3-acetic acid (IAA)- amino acid conjugates, providing a mechanism for the plant to cope with the presence of excess auxin; Belongs to the IAA-amido conjugating enzyme family.


ensembl_gene_id: Q2R3F5
symbol: ARF23
gene_biotype: protein_coding
description:
  Auxin response factor 23; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).


ensembl_gene_id: Q2R3K3
symbol: OsJ_34042
gene_biotype: protein_coding
description:
  Long chain base biosynthesis protein 2a; Serine palmitoyltransferase (SPT). The heterodimer formed with LCB1 constitutes the catalytic core (By similarity). Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: Q2R3P9
symbol: SWEET14
gene_biotype: protein_coding
description:
  Bidirectional sugar transporter SWEET14; Mediates both low-affinity uptake and efflux of sugar across the plasma membrane.


ensembl_gene_id: Q2R3Y1
symbol: SPL19
gene_biotype: protein_coding
description:
  Putative squamosa promoter-binding-like protein 19; Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'.


ensembl_gene_id: Q2R435
symbol: LA1
gene_biotype: protein_coding
description:
  Protein LAZY 1; Involved in the regulation of shoot gravitropism and tiller angle through negative regulation of basipetal polar auxin transport (PAT). Acts as positive regulator of lateral auxin transport ; Belongs to the LAZY family.


ensembl_gene_id: Q2R480
symbol: G6PGH2
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydrogenase, decarboxylating 2, chloroplastic; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.


ensembl_gene_id: Q2R481
symbol: Q2R481_ORYSJ
gene_biotype: protein_coding
description:
  Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.


ensembl_gene_id: Q2R482
symbol: MCM2
gene_biotype: protein_coding
description:
  DNA replication licensing factor MCM2; Probable component of the MCM2-7 complex (MCM complex) that may function as a DNA helicase and which is essential to undergo a single round of replication initiation and elongation per cell cycle in eukaryotic cells. Can complement the fission yeast mcm2 mutant.


ensembl_gene_id: Q2R483
symbol: OsJ_33906
gene_biotype: protein_coding
description:
  Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; In the C-terminal section; belongs to the HAD-like hydrolase superfamily. MasA/MtnC family.


ensembl_gene_id: Q2R4A1
symbol: Q2R4A1_ORYSJ
gene_biotype: protein_coding
description:
  40S ribosomal protein S5, putative, expressed; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: Q2R4G0
symbol: Q2R4G0_ORYSJ
gene_biotype: protein_coding
description:
  cDNA, clone: J023003B03, full insert sequence; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: Q2R6G9
symbol: Q2R6G9_ORYSJ
gene_biotype: protein_coding
description:
  O-methyltransferase family protein, expressed; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.


ensembl_gene_id: Q2R712
symbol: ACBSY_ORYSJ
gene_biotype: protein_coding
description:
  Achilleol B synthase; Specifically mediates the conversion of oxidosqualene ((3S)- 2,3-epoxy-2,3-dihydrosqualene) to achilleol B. Achilleol B is probably formed by cleavage of the 8-14 and 9-10 bonds of (3S)-2,3-epoxy-2,3- dihydrosqualene as part of the cyclization reaction, after formation of the oleanane skeleton.


ensembl_gene_id: Q2R837
symbol: OsJ_33509
gene_biotype: protein_coding
description:
  PHD finger protein ALFIN-LIKE 8; Histone-binding component that specifically recognizes H3 tails trimethylated on 'Lys-4' (H3K4me3), which mark transcription start sites of virtually all active genes; Belongs to the Alfin family.


ensembl_gene_id: Q2R859
symbol: Q2R859_ORYSJ
gene_biotype: protein_coding
description:
  Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide.


ensembl_gene_id: Q2R8I7
symbol: Q2R8I7_ORYSJ
gene_biotype: protein_coding
description:
  NBS-LRR type disease resistance protein, putative, expressed; Belongs to the disease resistance NB-LRR family.


ensembl_gene_id: Q2R8J2
symbol: Q2R8J2_ORYSJ
gene_biotype: protein_coding
description:
  NBS-LRR disease resistance protein, putative, expressed; Belongs to the disease resistance NB-LRR family.


ensembl_gene_id: Q2R8L1
symbol: RGA5
gene_biotype: protein_coding
description:
  Disease resistance protein RGA5; Probable disease resistance protein. Resistance proteins guard the plant against pathogens that contain an appropriate avirulence protein via an indirect interaction with this avirulence protein. That triggers a defense system including the hypersensitive response, which restricts the pathogen growth. At the opposite of cultivars Aichi asahi and Sasanishiki, the cultivars Nipponbare, Mokoto and Hitomebore don't recognize the effector avirulence protein AVR-Pia from M.oryzae.


ensembl_gene_id: Q2RA93
symbol: WNK6
gene_biotype: protein_coding
description:
  Probable serine/threonine-protein kinase WNK6; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. WNK subfamily.


ensembl_gene_id: Q2RAD9
symbol: H3R-11
gene_biotype: protein_coding
description:
  Histone H3.2; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.


ensembl_gene_id: Q2RAK2
symbol: OsJ_32969
gene_biotype: protein_coding
description:
  Pyruvate kinase 1, cytosolic; Key regulatory enzyme of the glycolytic pathway that catalyzes the final step of glycolysis, converting ADP and phosphoenolpyruvate (PEP) to ATP and pyruvate by essentially irreversible transphosphorylation. Is critical for plant growth and development.


ensembl_gene_id: Q2RAK6
symbol: Q2RAK6_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:002-141-B11, full insert sequence; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.


ensembl_gene_id: Q2RAP0
symbol: GLDH1
gene_biotype: protein_coding
description:
  L-galactono-1,4-lactone dehydrogenase 1, mitochondrial; Involved in the biosynthesis of ascorbic acid.


ensembl_gene_id: Q2RAP3
symbol: RR9
gene_biotype: protein_coding
description:
  Two-component response regulator ORR9; Functions as response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Type-A response regulators seem to act as negative regulators of the cytokinin signaling. Belongs to the ARR family. Type-A subfamily.


ensembl_gene_id: Q2RAP4
symbol: CYP90A3
gene_biotype: protein_coding
description:
  Cytochrome P450 90A3; Catalyzes the C23-alpha-hydroxylation step in brassinosteroid biosynthesis. Converts 6-deoxocathasterone to 6-deoxoteasterone in the late C6-oxidation pathway and cathasterone to teasterone in the early C6-oxidation pathway of brassinolide biosynthesis.


ensembl_gene_id: Q2RAQ5
symbol: NH5.1
gene_biotype: protein_coding
description:
  BTB/POZ domain and ankyrin repeat-containing protein NH5.1; Involved in defense response against pathogens.


ensembl_gene_id: Q2RAR6
symbol: CCDA1
gene_biotype: protein_coding
description:
  Cytochrome c-type biogenesis ccda-like chloroplastic protein 1; Probably involved in the transfer of reducing equivalents from stroma to thylakoid lumen and required for the biogenesis of the plastid cytochrome b6f complex; Belongs to the DsbD family.


ensembl_gene_id: Q2RAS0
symbol: ACA8
gene_biotype: protein_coding
description:
  Probable calcium-transporting ATPase 8, plasma membrane-type; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles.


ensembl_gene_id: Q2RAV0
symbol: CPK25
gene_biotype: protein_coding
description:
  Calcium-dependent protein kinase 25; May play a role in signal transduction pathways that involve calcium as a second messenger.


ensembl_gene_id: Q2RAX3
symbol: CIPK33
gene_biotype: protein_coding
description:
  CBL-interacting protein kinase 33; CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity).


ensembl_gene_id: Q2RB28
symbol: MIF1
gene_biotype: protein_coding
description:
  Mini zinc finger protein 1; Inhibits zinc finger homeodomain (ZHD) transcription factors, by interacting with them to prevent both their nuclear localization and their DNA-binding properties.


ensembl_gene_id: Q2RB33
symbol: NAC45
gene_biotype: protein_coding
description:
  NAC domain-containing protein 45; Transcription activator involved in responses to drought stress and salt stress. Transactivates the stress response genes LEA19 and PM19L.


ensembl_gene_id: Q2RB59
symbol: SCR1
gene_biotype: protein_coding
description:
  Protein SCARECROW 1; Transcription factor required for quiescent center cells specification and maintenance of surrounding stem cells, and for the asymmetric cell division involved in radial pattern formation in roots. Essential for cell division but not differentiation of the ground tissue. Regulates the radial organization of the shoot axial organs. Restricts SHR movment and sequesters it into the nucleus of the endodermis (By similarity); Belongs to the GRAS family.


ensembl_gene_id: Q2RB87
symbol: Q2RB87_ORYSJ
gene_biotype: protein_coding
description:
  Serine/threonine-protein kinase NAK, putative, expressed; Belongs to the protein kinase superfamily.


ensembl_gene_id: Q2RBE3
symbol: WNK7
gene_biotype: protein_coding
description:
  Probable serine/threonine-protein kinase WNK7; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. WNK subfamily.


ensembl_gene_id: Q2RBF0
symbol: CIPK15
gene_biotype: protein_coding
description:
  CBL-interacting protein kinase 15; Involved in salt stress tolerance. CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner; Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.


ensembl_gene_id: Q2RBJ2
symbol: OsJ_32671
gene_biotype: protein_coding
description:
  Probable staphylococcal-like nuclease CAN2; Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond.


ensembl_gene_id: Q2RBJ4
symbol: DRM1A
gene_biotype: protein_coding
description:
  DNA (cytosine-5)-methyltransferase DRM1A; Involved in de novo DNA methylation. Involved in RNA-directed DNA methylation (RdDM).


ensembl_gene_id: Q2RBK2
symbol: LAC17
gene_biotype: protein_coding
description:
  Putative laccase-17; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family.


ensembl_gene_id: Q2RBM4
symbol: Q2RBM4_ORYSJ
gene_biotype: protein_coding
description:
  Ubiquitin-activating enzyme E1 2, putative, expressed; Belongs to the ubiquitin-activating E1 family.


ensembl_gene_id: Q2RBN7
symbol: CLH1_ORYSJ
gene_biotype: protein_coding
description:
  Clathrin heavy chain 1; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles.


ensembl_gene_id: Q2RBP2
symbol: D53
gene_biotype: protein_coding
description:
  Protein DWARF 53; Repressor of strigolactones (SL) signaling. Subjected to a negative feedback control of SL signaling.


ensembl_gene_id: Q2RBR1
symbol: PHOT1B
gene_biotype: protein_coding
description:
  Phototropin-1B; Protein kinase that acts as a blue light photoreceptor in a signal-transduction pathway for phototropic responses. Regulates a wide range of physiological activities in plants that maximize the efficiency of photosynthesis, such as chloroplast relocations, stomata opening, and leaf expansion (By similarity).


ensembl_gene_id: Q2RBS4
symbol: ATG8D
gene_biotype: protein_coding
description:
  Autophagy-related protein 8D; Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton; Belongs to the ATG8 family.


ensembl_gene_id: Q2TQ34
symbol: AP2-1
gene_biotype: protein_coding
description:
  APETALA2-like protein 1; Probable transcription factor (By similarity). Involved in spikelet transition (Probable). Regulator of starch biosynthesis especially during seed development (e.g. endosperm starch granules); represses the expression of type I starch synthesis genes. Prevents lemma and palea elongation as well as grain growth. Belongs to the AP2/ERF transcription factor family. AP2 subfamily.


ensembl_gene_id: Q2V0P1
symbol: MADS58
gene_biotype: protein_coding
description:
  MADS-box transcription factor 58; Probable transcription factor involved in the development of floral organs. Acts as a C-class protein in association with MADS3. Involved in the control of lodicule number (whorl 2), stamen specification (whorl 3), floral meristem determinacy and regulation of the carpel morphogenesis (whorl 4). Plays a more predominant role in floral meristem determinacy than MADS3.


ensembl_gene_id: Q336M2
symbol: CDKE-1
gene_biotype: protein_coding
description:
  Cyclin-dependent kinase E-1; Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily.


ensembl_gene_id: Q336N8
symbol: JMJ706
gene_biotype: protein_coding
description:
  Lysine-specific demethylase JMJ706; Histone demethylase that demethylates 'Lys-9' (H3K9me) of histone H3 with a specific activity for H3K9me3 and H3K9me2. No activity on H3K4me3, H3K9me1, H3K27me2 and H3K36me3/2. Involved in the control of floral organ development by demethylating H3K9me3 and H3K9me2 in the promoter regions of DH1 and MADS47. The 'Lys-9' demethylation of these two genes is required for induction of their expression.


ensembl_gene_id: Q336P2
symbol: ROC3
gene_biotype: protein_coding
description:
  Homeobox-leucine zipper protein ROC3; Probable transcription factor; Belongs to the HD-ZIP homeobox family. Class IV subfamily.


ensembl_gene_id: Q336P5
symbol: MYC2
gene_biotype: protein_coding
description:
  Transcription factor MYC2; Transcriptional activator involved in jasmonate (JA) signaling pathway during spikelet development. Binds to the G2 region G-box (5'-CACGTG-3') of the MADS1 promoter and thus directly regulates the expression of MADS1. Its function in MADS1 activation is abolished by TIFY3/JAZ1 which directly target MYC2 during spikelet development. Belongs to the bHLH protein family.


ensembl_gene_id: Q336P7
symbol: Q336P7_ORYSJ
gene_biotype: protein_coding
description:
  60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.


ensembl_gene_id: Q336R3
symbol: HUB2
gene_biotype: protein_coding
description:
  E3 ubiquitin-protein ligase BRE1-like 2; E3 ubiquitin-protein ligase that monoubiquitinates H2B to form H2BK143ub1. H2BK143ub1 gives a specific tag for epigenetic transcriptional activation and is a prerequisite for H3 Lys-4 methylation (H3K4me). It thereby plays a central role in histone code and gene regulation. H2B monoubiquitination, mediated by HUB2, modulates transcriptional regulation of anther development, likely by promoting histone H3K4 dimethylation (H3K4me2) in the chromatin of the key tapetum degradation-related genes C4, CP1 and UDT1. H2B monoubiquitination, mediated by H [...]


ensembl_gene_id: Q336R6
symbol: Q336R6_ORYSJ
gene_biotype: protein_coding
description:
  Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.


ensembl_gene_id: Q336R8
symbol: Q336R8_ORYSJ
gene_biotype: protein_coding
description:
  Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.


ensembl_gene_id: Q336R9
symbol: MSRA4
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase A4, chloroplastic; Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Involved in abiotic and salt stress responses. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. MSRA family specifically reduces the MetSO S-enantiomer.


ensembl_gene_id: Q336T5
symbol: EXPB3
gene_biotype: protein_coding
description:
  Expansin-B3; May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity).


ensembl_gene_id: Q336V5
symbol: ACR2.1
gene_biotype: protein_coding
description:
  Arsenate reductase 2.1; Possesses arsenate reductase activity in vitro. Catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)]. May play a role in arsenic retention in roots.


ensembl_gene_id: Q336V9
symbol: BSK1-2
gene_biotype: protein_coding
description:
  Serine/threonine-protein kinase BSK1-2; Probable serine/threonine kinase that functions as a positive regulator of plant immunity. May be involved in the regulation of pattern-triggered immunity (PTI). Does not seem to be involved in responses to brassinosteroid (BR) signaling. Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q336W8
symbol: Q336W8_ORYSJ
gene_biotype: protein_coding
description:
  Hexose transporter, putative, expressed; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: Q337A5
symbol: ADF10
gene_biotype: protein_coding
description:
  Actin-depolymerizing factor 10; Actin-depolymerizing protein. Severs actin filaments (F- actin) and binds to actin monomers (By similarity).


ensembl_gene_id: Q337B8
symbol: ETFQO_ORYSJ
gene_biotype: protein_coding
description:
  Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial; Accepts electrons from ETF and reduces ubiquinone.


ensembl_gene_id: Q337H3
symbol: Q337H3_ORYSJ
gene_biotype: protein_coding
description:
  1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.


ensembl_gene_id: Q337M1
symbol: Q337M1_ORYSJ
gene_biotype: protein_coding
description:
  Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.


ensembl_gene_id: Q337V5
symbol: Q337V5_ORYSJ
gene_biotype: protein_coding
description:
  Sodium/calcium exchanger protein, expressed; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.


ensembl_gene_id: Q337Y2
symbol: CAD3
gene_biotype: protein_coding
description:
  Probable cinnamyl alcohol dehydrogenase 3; Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers. Catalyzes the NADPH- dependent reduction of coniferaldehyde, 5-hydroxyconiferaldehyde, sinapaldehyde, 4-coumaraldehyde and caffeyl aldehyde to their respective alcohols.


ensembl_gene_id: Q338B0
symbol: HSFA2C
gene_biotype: protein_coding
description:
  Heat stress transcription factor A-2c; Transcriptional activator that specifically binds DNA of heat shock promoter elements (HSE).


ensembl_gene_id: Q338B9
symbol: GCN5
gene_biotype: protein_coding
description:
  Histone acetyltransferase GCN5; Acetylates histone H3. Acetylation of histones gives a specific tag for epigenetic transcription activation. Operates in concert with certain DNA-binding transcriptional activators. Acts via the formation of large multiprotein complexes that modify the chromatin (By similarity).


ensembl_gene_id: Q338C0
symbol: AARE2_ORYSJ
gene_biotype: protein_coding
description:
  Acylamino-acid-releasing enzyme 2; Catalyzes the hydrolysis of the N-terminal peptide bond of an N-acetylated peptide to generate an N-acetylated amino acid and a peptide with a free N-terminus; Belongs to the peptidase S9C family.


ensembl_gene_id: Q338G6
symbol: ILI7
gene_biotype: protein_coding
description:
  Transcription factor ILI7; Atypical and probable non DNA-binding bHLH transcription factor that integrates multiple signaling pathways to regulate cell elongation and plant development.


ensembl_gene_id: Q338X7
symbol: THT1
gene_biotype: protein_coding
description:
  Tryptamine hydroxycinnamoyltransferase 1; Hydroxycinnamoyl transferase that catalyzes the transfer of an acyl from p-coumaryol-CoA to tryptamine, to produce coumaroyl tryptamine. Serotonin, tyramine, and to a lesser extent agmatine, serve as acyl acceptors in vitro. Can use caffeoyl-CoA, and to a lesser extent benzoyl-CoA, as acyl donors; Belongs to the plant acyltransferase family.


ensembl_gene_id: Q338Z4
symbol: Q338Z4_ORYSJ
gene_biotype: protein_coding
description:
  NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.


ensembl_gene_id: Q338Z7
symbol: HOX8
gene_biotype: protein_coding
description:
  Homeobox-leucine zipper protein HOX8; Probable transcription factor; Belongs to the HD-ZIP homeobox family. Class I subfamily.


ensembl_gene_id: Q339K6
symbol: LAC15
gene_biotype: protein_coding
description:
  Laccase-15; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family.


ensembl_gene_id: Q339N5
symbol: CSLH1
gene_biotype: protein_coding
description:
  Cellulose synthase-like protein H1; Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase-like H subfamily.


ensembl_gene_id: Q339W7
symbol: LHP1
gene_biotype: protein_coding
description:
  Probable chromo domain-containing protein LHP1; Structural component of heterochromatin involved in gene repression. Recognizes and binds histone H3 tails methylated at 'Lys- 9', leading to epigenetic repression (By similarity).


ensembl_gene_id: Q33AD8
symbol: Q33AD8_ORYSJ
gene_biotype: protein_coding
description:
  Ubiquitin-conjugating enzyme E2 M, putative, expressed; Belongs to the ubiquitin-conjugating enzyme family.


ensembl_gene_id: Q33AH8
symbol: GUT1
gene_biotype: protein_coding
description:
  Probable glucuronosyltransferase GUT1; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls; Belongs to the glycosyltransferase 47 family.


ensembl_gene_id: Q33BI9
symbol: ITPK1
gene_biotype: protein_coding
description:
  Inositol-tetrakisphosphate 1-kinase 1; Kinase that can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4 or Ins(1,3,4)P3 and participates in phytic acid biosynthesis in developing seeds. Phytic acid is the primary storage form of phosphorus in cereal grains and other plant seeds. Belongs to the ITPK1 family.


ensembl_gene_id: Q33DK1
symbol: WOX3
gene_biotype: protein_coding
description:
  WUSCHEL-related homeobox 3; Transcription factor which may be involved in developmental processes. Seems to act as repressor of YAB5. Belongs to the WUS homeobox family.


ensembl_gene_id: Q35322
symbol: NAD9
gene_biotype: protein_coding
description:
  NADH dehydrogenase [ubiquinone] iron-sulfur protein 3; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity).


ensembl_gene_id: Q3HRN7
symbol: CBL10
gene_biotype: protein_coding
description:
  Calcineurin B-like protein 10; Acts as a calcium sensor. CBL proteins interact with CIPK serine-threonine protein kinases. Binding of a CBL protein to the regulatory NAF domain of a CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity); Belongs to the calcineurin regulatory subunit family.


ensembl_gene_id: Q3HRN8
symbol: CBL9
gene_biotype: protein_coding
description:
  Calcineurin B-like protein 9; Acts as a calcium sensor. CBL proteins interact with CIPK serine-threonine protein kinases. Binding of a CBL protein to the regulatory NAF domain of a CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity).


ensembl_gene_id: Q3HRN9
symbol: CBL8
gene_biotype: protein_coding
description:
  Calcineurin B-like protein 8; Acts as a calcium sensor. May function as positive regulator of salt stress responses. CBL proteins interact with CIPK serine- threonine protein kinases. Binding of a CBL protein to the regulatory NAF domain of a CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity).


ensembl_gene_id: Q3HRP0
symbol: CBL7
gene_biotype: protein_coding
description:
  Calcineurin B-like protein 7; Acts as a calcium sensor. CBL proteins interact with CIPK serine-threonine protein kinases. Binding of a CBL protein to the regulatory NAF domain of a CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity).


ensembl_gene_id: Q3HRP1
symbol: CBL6
gene_biotype: protein_coding
description:
  Calcineurin B-like protein 6; Acts as a calcium sensor. CBL proteins interact with CIPK serine-threonine protein kinases. Binding of a CBL protein to the regulatory NAF domain of a CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity); Belongs to the calcineurin regulatory subunit family.


ensembl_gene_id: Q3HRP2
symbol: CBL5
gene_biotype: protein_coding
description:
  Calcineurin B-like protein 5; Acts as a calcium sensor. CBL proteins interact with CIPK serine-threonine protein kinases. Binding of a CBL protein to the regulatory NAF domain of a CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity); Belongs to the calcineurin regulatory subunit family.


ensembl_gene_id: Q3HRP5
symbol: CBL2
gene_biotype: protein_coding
description:
  Calcineurin B-like protein 2; Acts as a calcium sensor. May promote vacuolation of aleurone cells in response to signal induced by gibberellin. CBL proteins interact with CIPK serine-threonine protein kinases. Binding of a CBL protein to the regulatory NAF domain of a CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity).


ensembl_gene_id: Q3T5N4
symbol: DREB1B
gene_biotype: protein_coding
description:
  Dehydration-responsive element-binding protein 1B; Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription. Confers resistance to high salt, cold and drought stress.


ensembl_gene_id: Q40636
symbol: EXPA2
gene_biotype: protein_coding
description:
  Expansin-A2; May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity).


ensembl_gene_id: Q40637
symbol: EXPA3
gene_biotype: protein_coding
description:
  Expansin-A3; May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity); Belongs to the expansin family. Expansin A subfamily.


ensembl_gene_id: Q40638
symbol: EXPB1a
gene_biotype: protein_coding
description:
  Expansin-B1; May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity); Belongs to the expansin family. Expansin B subfamily.


ensembl_gene_id: Q40648
symbol: KOB1
gene_biotype: protein_coding
description:
  Probable voltage-gated potassium channel subunit beta; Probable accessory potassium channel protein which modulates the activity of the pore-forming alpha subunit.


ensembl_gene_id: Q40665
symbol: TUBB3
gene_biotype: protein_coding
description:
  Tubulin beta-3 chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain; Belongs to the tubulin family.


ensembl_gene_id: Q40680
symbol: P0616D06.117
gene_biotype: protein_coding
description:
  Elongation factor 1-delta 1; EF-1-beta and EF-1-beta' stimulate the exchange of GDP bound to EF-1-alpha to GTP; Belongs to the EF-1-beta/EF-1-delta family.


ensembl_gene_id: Q40682
symbol: EF1D2_ORYSJ
gene_biotype: protein_coding
description:
  Elongation factor 1-delta 2; EF-1-beta and EF-1-beta' stimulate the exchange of GDP bound to EF-1-alpha to GTP; Belongs to the EF-1-beta/EF-1-delta family.


ensembl_gene_id: Q40687
symbol: RGB1
gene_biotype: protein_coding
description:
  Guanine nucleotide-binding protein subunit beta; Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.


ensembl_gene_id: Q40702
symbol: MADS2
gene_biotype: protein_coding
description:
  MADS-box transcription factor 2; Probable transcription factor involved in the development of floral organs. B-class protein required for normal development of lodicules (whorl 2).


ensembl_gene_id: Q40703
symbol: MADS4
gene_biotype: protein_coding
description:
  MADS-box transcription factor 4; Probable transcription factor involved in the development of floral organs. B-class protein required for normal development of lodicules and stamens (whorls 2 and 3). May function as a heterodimer with MADS16.


ensembl_gene_id: Q40704
symbol: MADS3
gene_biotype: protein_coding
description:
  MADS-box transcription factor 3; Probable transcription factor involved in the development of floral organs. Acts as C-class protein in association with MADS58. Involved in the control of lodicule number (whorl 2), stamen specification (whorl 3) and floral meristem determinacy (whorl 4), but not in the regulation of carpel morphogenesis. Plays a more predominant role in controlling lodicule development and in specifying stamen identity than MADS58.


ensembl_gene_id: Q40731
symbol: OsJ_14516
gene_biotype: protein_coding
description:
  Stearoyl-[acyl-carrier-protein] 9-desaturase 5, chloroplastic; Converts stearoyl-ACP to oleoyl-ACP by introduction of a cis double bond between carbons 9 and 10 of the acyl chain. Belongs to the fatty acid desaturase type 2 family.


ensembl_gene_id: Q40742
symbol: RAD23
gene_biotype: protein_coding
description:
  Probable ubiquitin receptor RAD23; May be involved in nucleotide excision repair (By similarity). Binds and presumably selects ubiquitin-conjugates for destruction. Prefers multiubiquitin chains rather than single ubiquitins, with a binding affinity for 'Lys-48'-linked ubiquitin chains. Acts as a ubiquitin receptor that associates with the 26S proteasomal docking subunit RPN10 for the indirect recognition of ubiquitinated substrates of ubiquitin/26S proteasome-mediated proteolysis (UPP) (By similarity); Belongs to the RAD23 family.


ensembl_gene_id: Q40746
symbol: NIP1-1
gene_biotype: protein_coding
description:
  Aquaporin NIP1-1; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.


ensembl_gene_id: Q42456
symbol: OJ1781_H11.11
gene_biotype: protein_coding
description:
  Aspartic proteinase oryzasin-1; Involved in the breakdown of propeptides of storage proteins in protein-storage vacuoles.


ensembl_gene_id: Q42465
symbol: PROLM20
gene_biotype: protein_coding
description:
  Prolamin PPROL 14P; Seed storage protein; serves as a source of nitrogen, carbon and sulfur for the young developing seedling; Belongs to the prolamin family.


ensembl_gene_id: Q42980
symbol: OLE16
gene_biotype: protein_coding
description:
  Oleosin 16 kDa; May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth; Belongs to the oleosin family.


ensembl_gene_id: Q42993
symbol: Cht1
gene_biotype: protein_coding
description:
  Chitinase 1; Hydrolyzes chitin and may play a role in defense against fungal pathogens containing chitin; Belongs to the glycosyl hydrolase 19 family. Chitinase class I subfamily.


ensembl_gene_id: Q42997
symbol: P0025H06.19-1
gene_biotype: protein_coding
description:
  Ferredoxin--nitrite reductase, chloroplastic; Catalyzes the six-electron reduction of nitrite to ammonium.


ensembl_gene_id: Q43007
symbol: PLD1
gene_biotype: protein_coding
description:
  Phospholipase D alpha 1; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond. Plays an important role in various cellular processes; Belongs to the phospholipase D family. C2-PLD subfamily.


ensembl_gene_id: Q43008
symbol: SODA
gene_biotype: protein_coding
description:
  Superoxide dismutase [Mn], mitochondrial; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.


ensembl_gene_id: Q43009
symbol: SUS3
gene_biotype: protein_coding
description:
  Sucrose synthase 3; Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways; Belongs to the glycosyltransferase 1 family. Plant sucrose synthase subfamily.


ensembl_gene_id: Q43011
symbol: OJ1001_B06.12
gene_biotype: protein_coding
description:
  Asparagine synthetase [glutamine-hydrolyzing] 2; Essential for nitrogen assimilation, distribution and remobilization within the plant via the phloem.


ensembl_gene_id: Q43594
symbol: TUBB1
gene_biotype: protein_coding
description:
  Tubulin beta-1 chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.


ensembl_gene_id: Q4ADV8
symbol: CKX2
gene_biotype: protein_coding
description:
  Cytokinin dehydrogenase 2; Catalyzes the oxidation of cytokinins, a family of N(6)- substituted adenine derivatives that are plant hormones, where the substituent is an isopentenyl group. Modulates the number of reproductive organs by regulating the cytokinin accumulation in inflorescence meristems. Major QTL involved in grain yield. Belongs to the oxygen-dependent FAD-linked oxidoreductase family.


ensembl_gene_id: Q4PNY1
symbol: EXPA11
gene_biotype: protein_coding
description:
  Expansin-A11; May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity).


ensembl_gene_id: Q4PR39
symbol: EXPA29
gene_biotype: protein_coding
description:
  Expansin-A29; May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity).


ensembl_gene_id: Q4PR40
symbol: EXPA28
gene_biotype: protein_coding
description:
  Expansin-A28; May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity); Belongs to the expansin family. Expansin A subfamily.


ensembl_gene_id: Q4PR41
symbol: EXPA25
gene_biotype: protein_coding
description:
  Expansin-A25; May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity).


ensembl_gene_id: Q4PR42
symbol: EXPA24
gene_biotype: protein_coding
description:
  Expansin-A24; May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity).


ensembl_gene_id: Q4PR43
symbol: EXPA23.1
gene_biotype: protein_coding
description:
  Expansin-A23; May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity); Belongs to the expansin family. Expansin A subfamily.


ensembl_gene_id: Q4PR44
symbol: EXPA22
gene_biotype: protein_coding
description:
  Expansin-A22; May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity); Belongs to the expansin family. Expansin A subfamily.


ensembl_gene_id: Q4PR48
symbol: EXPA18
gene_biotype: protein_coding
description:
  Expansin-A18; May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity).


ensembl_gene_id: Q4PR49
symbol: EXPA17
gene_biotype: protein_coding
description:
  Expansin-A17; May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity).


ensembl_gene_id: Q4PR50
symbol: EXPA15
gene_biotype: protein_coding
description:
  Expansin-A15; May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity).


ensembl_gene_id: Q4PR51
symbol: EXPA14
gene_biotype: protein_coding
description:
  Expansin-A14; May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity); Belongs to the expansin family. Expansin A subfamily.


ensembl_gene_id: Q4PR52
symbol: EXPA13
gene_biotype: protein_coding
description:
  Expansin-A13; May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity).


ensembl_gene_id: Q4PR53
symbol: EXPA9
gene_biotype: protein_coding
description:
  Expansin-A9; May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity).


ensembl_gene_id: Q52RG7
symbol: SPL
gene_biotype: protein_coding
description:
  Sphingosine-1-phosphate lyase; Cleaves phosphorylated sphingoid bases (PSBs), such as sphingosine-1-phosphate, into fatty aldehydes and phosphoethanolamine. Elevates stress-induced ceramide production and apoptosis (By similarity).


ensembl_gene_id: Q53JF7
symbol: ASR5
gene_biotype: protein_coding
description:
  Abscisic stress-ripening protein 5; May function in gibberellin signaling pathway downstream of GID1 and SLR1. May be involved in the regulation of plant growth in the basal region of leaf sheaths (Probable). Involved in tolerance to aluminum. Regulates the expression of different genes that collectively contribute to the protection of the cell in response to aluminum stress. Binds to the promoter and regulates the expression of target genes involved in aluminum stress response. Binds to the promoter of STAR1 gene, which encodes an ABC transporter required for aluminum tolerance. Invol [...]


ensembl_gene_id: Q53JG0
symbol: RPL3B
gene_biotype: protein_coding
description:
  60S ribosomal protein L3, putative, expressed; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: Q53JG7
symbol: LAX14_ORYSJ
gene_biotype: protein_coding
description:
  Putative auxin transporter-like protein 4; Carrier protein involved in proton-driven auxin influx. May mediate the formation of auxin gradient from developing leaves (site of auxin biosynthesis) to tips (By similarity); Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.1) subfamily.


ensembl_gene_id: Q53JI9
symbol: SPS5
gene_biotype: protein_coding
description:
  Probable sucrose-phosphate synthase 5; Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP- glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation (By similarity); Belongs to the glycosyltransferase 1 family.


ensembl_gene_id: Q53JY8
symbol: ACLA-1
gene_biotype: protein_coding
description:
  ATP-citrate synthase subunit alpha chain protein 1; ATP citrate-lyase is the primary enzyme responsible for the synthesis of cytosolic acetyl-CoA, used for the elongation of fatty acids and biosynthesis of isoprenoids, flavonoids and malonated derivatives. May supply substrate to the cytosolic acetyl-CoA carboxylase, which generates the malonyl-CoA used for the synthesis of a multitude of compounds, including very long chain fatty acids and flavonoids. In contrast to all known animal ACL enzymes having a homomeric structure, plant ACLs are composed of alpha and beta chains (By similari [...]


ensembl_gene_id: Q53K16
symbol: SCL7
gene_biotype: protein_coding
description:
  SCARECROW-LIKE protein 7; Probable transcription factor involved in plant development (By similarity). Involved in environmental abiotic stress resistance. May increase the expression of stress-responsive genes (By similarity). Binds DNA in vitro. Belongs to the GRAS family.


ensembl_gene_id: Q53K23
symbol: Q53K23_ORYSJ
gene_biotype: protein_coding
description:
  Glucan endo-1,3-beta-glucosidase 7, putative, expressed; Belongs to the glycosyl hydrolase 17 family.


ensembl_gene_id: Q53K52
symbol: OsJ_12008
gene_biotype: protein_coding
description:
  Protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic; Plays an essential role in early steps of chloroplast development. May be involved in the redox control of plastid gene expression by maintening the redox state around chloroplast nucleoids. May positively regulate plastid-encoded RNA polymerase (PEP) activity.


ensembl_gene_id: Q53K63
symbol: Q53K63_ORYSJ
gene_biotype: protein_coding
description:
  Prefoldin subunit 4; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit beta family.


ensembl_gene_id: Q53KW9
symbol: AM1
gene_biotype: protein_coding
description:
  Protein AMEIOTIC 1 homolog; Plays a fundamental role in building the proper chromosome structure at the beginning of meiosis in male meiocytes. Required for the transition from leptotene to zygotene in meiocytes. Required for homologous chromosome pairing.


ensembl_gene_id: Q53LQ0
symbol: PDIL1-1
gene_biotype: protein_coding
description:
  Protein disulfide isomerase-like 1-1; Probable protein disulfide isomerase that plays an essential role in the segregation of proglutelin and prolamin polypeptides within the ER lumen of endosperm. Required to retain proglutelin in the cisternal ER lumen until ER export and, thereby, indirectly prevents heterotypic interactions with prolamin polypeptides.


ensembl_gene_id: Q53LU4
symbol: LAC18
gene_biotype: protein_coding
description:
  Laccase-18; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family.


ensembl_gene_id: Q53LY0
symbol: CLPC3
gene_biotype: protein_coding
description:
  Chaperone protein ClpC3, chloroplastic; Molecular chaperone that may interact with a ClpP-like protease involved in degradation of denatured proteins in the chloroplast; Belongs to the ClpA/ClpB family. ClpC subfamily.


ensembl_gene_id: Q53M52
symbol: TUBA
gene_biotype: protein_coding
description:
  Tubulin alpha-2 chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (By similarity).


ensembl_gene_id: Q53N47
symbol: CPLC4
gene_biotype: protein_coding
description:
  Chaperone protein ClpC4, chloroplastic; Molecular chaperone that may interact with a ClpP-like protease involved in degradation of denatured proteins in the chloroplast; Belongs to the ClpA/ClpB family. ClpC subfamily.


ensembl_gene_id: Q53N72
symbol: MPK15
gene_biotype: protein_coding
description:
  Mitogen-activated protein kinase 15; Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MAP kinase subfamily.


ensembl_gene_id: Q53NF7
symbol: NAC071
gene_biotype: protein_coding
description:
  NAC domain-containing protein 71; Transcription activator that binds to the promoter of the stress response gene LEA19. Involved in tolerance to abiotic stresses.


ensembl_gene_id: Q53NI2
symbol: NADK2_ORYSJ
gene_biotype: protein_coding
description:
  Probable NAD kinase 2, chloroplastic; Involved in chlorophyll synthesis and chloroplast protection against oxidative damage.


ensembl_gene_id: Q53NL5
symbol: Chib3H-h
gene_biotype: protein_coding
description:
  Xylanase inhibitor protein 2; Fungal xylanase inhibitor. Possesses competitive inhibiting activity against several fungal endo-1,4-beta-D-xylanases belonging to glycoside hydrolase family 10 (GH10) and family 11 (GH11). May function in plant defense against secreted fungal pathogen xylanases. Is similar to class III chitinases, but does not exhibit chitinase activity. Belongs to the glycosyl hydrolase 18 family. Xylanase inhibitor subfamily.


ensembl_gene_id: Q53P49
symbol: GH3.12
gene_biotype: protein_coding
description:
  Probable indole-3-acetic acid-amido synthetase GH3.12; May catalyze the synthesis of indole-3-acetic acid (IAA)- amino acid conjugates, providing a mechanism for the plant to cope with the presence of excess auxin.


ensembl_gene_id: Q53P53
symbol: Q53P53_ORYSJ
gene_biotype: protein_coding
description:
  1-aminocyclopropane-1-carboxylate oxidase, putative, expressed; Belongs to the iron/ascorbate-dependent oxidoreductase family.


ensembl_gene_id: Q53P54
symbol: PHT4;6
gene_biotype: protein_coding
description:
  Probable anion transporter 6; Probable anion transporter; Belongs to the major facilitator superfamily. Sodium/anion cotransporter (TC 2.A.1.14) family.


ensembl_gene_id: Q53P85
symbol: CPK24
gene_biotype: protein_coding
description:
  Calcium-dependent protein kinase 24; May play a role in signal transduction pathways that involve calcium as a second messenger (By similarity). Possesses calcium- dependent protein kinase activity in vitro. Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.


ensembl_gene_id: Q53P98
symbol: SPPL2
gene_biotype: protein_coding
description:
  Signal peptide peptidase-like 2; Intramembrane-cleaving aspartic protease (I-CLiP) that cleaves type II membrane signal peptides in the hydrophobic plane of the membrane; Belongs to the peptidase A22B family.


ensembl_gene_id: Q53PA7
symbol: Q53PA7_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:001-016-G08, full insert sequence; Belongs to the mitochondrial carrier (TC 2.A.29) family.


ensembl_gene_id: Q53PC7
symbol: OsJ_031814
gene_biotype: protein_coding
description:
  Coatomer subunit beta-1; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity).


ensembl_gene_id: Q53PN2
symbol: VITH4_ORYSJ
gene_biotype: protein_coding
description:
  Vacuolar iron transporter homolog 4; Probable vacuolar iron transporter that may be involved in the regulation of iron distribution throughout the plant. Belongs to the CCC1 family.


ensembl_gene_id: Q53Q78
symbol: Q53Q78_ORYSJ
gene_biotype: protein_coding
description:
  ATP-dependent (S)-NAD(P)H-hydrate dehydratase; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ATP, which is converted to ADP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S-and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.


ensembl_gene_id: Q53QG3
symbol: Q53QG3_ORYSJ
gene_biotype: protein_coding
description:
  Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.


ensembl_gene_id: Q53RB0
symbol: OsJ_12241
gene_biotype: protein_coding
description:
  Probable linoleate 9S-lipoxygenase 4; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. Catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure (By similarity).


ensembl_gene_id: Q53RH0
symbol: ERS1
gene_biotype: protein_coding
description:
  Probable ethylene response sensor 1; Ethylene receptor related to bacterial two-component regulators. Acts as a redundant negative regulator of ethylene signaling.


ensembl_gene_id: Q53RJ5
symbol: BIP2
gene_biotype: protein_coding
description:
  Heat shock 70 kDa protein BIP2; Functions as chaperone during endoplasmic reticulum (ER) stress response.


ensembl_gene_id: Q53RK8
symbol: OsJ_12293
gene_biotype: protein_coding
description:
  DEAD-box ATP-dependent RNA helicase 21; ATP-dependent RNA helicase involved in mRNA splicing. May destabilize the U1/5'-splice site duplex to permit an effective competition for the 5'-splice site by the U6 snRNA, resulting in the switch between U1 and U6 at the 5'-splice site. May also act to unwind the U4/U6 base-pairing interaction in the U4/U6/U5 snRNP, facilitating the first covalent step of splicing (By similarity); Belongs to the DEAD box helicase family. DDX23/PRP28 subfamily.


ensembl_gene_id: Q53RM0
symbol: CHLI
gene_biotype: protein_coding
description:
  Magnesium-chelatase subunit ChlI, chloroplastic; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. The reaction takes place in two steps, with an ATP-dependent activation followed by an ATP-dependent chelation step. Belongs to the Mg-chelatase subunits D/I family.


ensembl_gene_id: Q53WJ1
symbol: JMJ703
gene_biotype: protein_coding
description:
  Lysine-specific demethylase JMJ703; Histone demethylase that demethylates 'Lys-4' (H3K4me) of histone H3 with a specific activity for H3K4me3, H3K4me2 and H3K4me1. No activity on H3K9me3/2/1, H3K27me3/2/1 and H3K36me3/2/1. Involved in the control of stem elongation by regulating methylation states of H3K4me3 on cytokinin oxidase (CKX) gene family, which may cause increased expression of CKX genes and reduced cytokinin levels. Prevents ectopic retrotransposition by regulating the levels of H3K4me3 in two non-LTR retrotransposons KARMA and LINE-1 (L1) and reinforcing their repressed states.


ensembl_gene_id: Q53WK1
symbol: GINT1
gene_biotype: protein_coding
description:
  Glucosamine inositolphosphorylceramide transferase 1; Essential protein. Glycosyltransferase that mediates the glycosylation of glycosylinositol phosphorylceramides (GIPCs), the major sphingolipids in the plasma membrane; acts as a HexN(Ac)-specific GIPC sugar transferase. Responsible for the glycosylation of a subgroup of GIPCs found in seeds and pollen that contain GlcNAc and GlcN (GlcN(Ac)). Maybe involved in the maintenance of cell-cell adhesion.


ensembl_gene_id: Q53WK4
symbol: NAP1;2
gene_biotype: protein_coding
description:
  Nucleosome assembly protein 1;2; May modulate chromatin structure by regulation of nucleosome assembly/disassembly.


ensembl_gene_id: Q53WP9
symbol: PHT4;2
gene_biotype: protein_coding
description:
  Probable anion transporter 2, chloroplastic; Probable anion transporter; Belongs to the major facilitator superfamily. Sodium/anion cotransporter (TC 2.A.1.14) family.


ensembl_gene_id: Q58G87
symbol: UBQ3
gene_biotype: protein_coding
description:
  Ubiquitin-related; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is involved in protein degrad [...]


ensembl_gene_id: Q5CCK1
symbol: CYP90A4
gene_biotype: protein_coding
description:
  Cytochrome P450 90A4; Catalyzes the C23-alpha-hydroxylation step in brassinosteroid biosynthesis. Converts 6-deoxocathasterone to 6-deoxoteasterone in the late C6-oxidation pathway and cathasterone to teasterone in the early C6-oxidation pathway of brassinolide biosynthesis; Belongs to the cytochrome P450 family.


ensembl_gene_id: Q5CCK3
symbol: CYP90B2
gene_biotype: protein_coding
description:
  Cytochrome P450 90B2; Catalyzes the C22-alpha-hydroxylation step in brassinosteroid biosynthesis, which is the rate-limiting step in this biosynthetic pathway. Converts campestanol to 6-deoxocathasterone and 6- oxocampestanol to cathasterone; Belongs to the cytochrome P450 family.


ensembl_gene_id: Q5CD17
symbol: NAC077
gene_biotype: protein_coding
description:
  NAC domain-containing protein 77; Probable transcription factor involved in stress response (By similarity). Binds to DNA-specific sequences of CLPD1 and OAT promoters in vitro.


ensembl_gene_id: Q5I396
symbol: DGAT1-1
gene_biotype: protein_coding
description:
  Diacylglycerol O-acyltransferase 1-1; Involved in triacylglycerol (TAG) synthesis. Catalyzes the acylation of the sn-3 hydroxy group of sn-1,2-diacylglycerol using acyl-CoA; Belongs to the membrane-bound acyltransferase family. Sterol o-acyltransferase subfamily.


ensembl_gene_id: Q5J4W4
symbol: MPK2
gene_biotype: protein_coding
description:
  Mitogen-activated protein kinase 2; Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MAP kinase subfamily.


ensembl_gene_id: Q5JJI4
symbol: TOM20
gene_biotype: protein_coding
description:
  Probable mitochondrial import receptor subunit TOM20; Central component of the receptor complex responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins. Together with TOM22 functions as the transit peptide receptor at the surface of the mitochondrion outer membrane and facilitates the movement of preproteins into the translocation pore (By similarity); Belongs to the Tom20 family.


ensembl_gene_id: Q5JJJ5
symbol: Q5JJJ5_ORYSJ
gene_biotype: protein_coding
description:
  Os01g0920400 protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.


ensembl_gene_id: Q5JJV0
symbol: CIN4
gene_biotype: protein_coding
description:
  Beta-fructofuranosidase, insoluble isoenzyme 4; May play a role in sucrose partitioning during seed development and in stress response; Belongs to the glycosyl hydrolase 32 family.


ensembl_gene_id: Q5JJY4
symbol: P2C04_ORYSJ
gene_biotype: protein_coding
description:
  Protein kinase and PP2C-like domain-containing protein; In the C-terminal section; belongs to the PP2C family.


ensembl_gene_id: Q5JJY5
symbol: SWEET2A
gene_biotype: protein_coding
description:
  Bidirectional sugar transporter SWEET2a; Mediates both low-affinity uptake and efflux of sugar across the plasma membrane.


ensembl_gene_id: Q5JK20
symbol: ARF4
gene_biotype: protein_coding
description:
  Auxin response factor 4; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).


ensembl_gene_id: Q5JK24
symbol: TPK1
gene_biotype: protein_coding
description:
  Thiamine pyrophosphokinase 1; Catalyzes the phosphorylation of thiamine to thiamine pyrophosphate (TPP). TPP is an active cofactor for enzymes involved in glycolysis and energy production. Plant leaves require high levels of TPP for photosynthesis and carbohydrate metabolism (By similarity).


ensembl_gene_id: Q5JK32
symbol: HAK5
gene_biotype: protein_coding
description:
  Potassium transporter 5; High-affinity potassium transporter; Belongs to the HAK/KUP transporter (TC 2.A.72.3) family.


ensembl_gene_id: Q5JK39
symbol: OsJ_04635
gene_biotype: protein_coding
description:
  Long chain base biosynthesis protein 2d; Serine palmitoyltransferase (SPT). The heterodimer formed with LCB1 constitutes the catalytic core (By similarity). Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: Q5JK68
symbol: CDKC-2
gene_biotype: protein_coding
description:
  Cyclin-dependent kinase C-2; Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily.


ensembl_gene_id: Q5JK84
symbol: AIP2
gene_biotype: protein_coding
description:
  DEAD-box ATP-dependent RNA helicase 15; ATP-binding RNA helicase involved in pre-mRNA splicing. Required for the export of mRNA out of the nucleus (By similarity). Required for tapetal programmed cell death (PCD) and degeneration during anther development. Forms dimer with AIP1 and binds the promoter region of the cysteine protease CP1. Can complement the yeast RNA helicase SUB2. Plants silencing AIP1 and AIP2 are male sterile.


ensembl_gene_id: Q5JKB0
symbol: MCM4
gene_biotype: protein_coding
description:
  DNA replication licensing factor MCM4; Probable component of the MCM2-7 complex (MCM complex) that may function as a DNA helicase and which is essential to undergo a single round of replication initiation and elongation per cell cycle in eukaryotic cells.


ensembl_gene_id: Q5JKF2
symbol: B1156H12.12-1
gene_biotype: protein_coding
description:
  DEAD-box ATP-dependent RNA helicase 40; ATP-dependent RNA helicase involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing.


ensembl_gene_id: Q5JKN2
symbol: ABIL2_ORYSJ
gene_biotype: protein_coding
description:
  Putative protein ABIL2; Involved in regulation of actin and microtubule organization. Part of a WAVE complex that activates the Arp2/3 complex (By similarity).


ensembl_gene_id: Q5JKW1
symbol: KIN14C
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-14C; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-14 subfamily.


ensembl_gene_id: Q5JL08
symbol: MON1
gene_biotype: protein_coding
description:
  Vacuolar fusion protein MON1 homolog; Plays an important role in membrane trafficking through the secretory apparatus. In complex with CCZ1, acts as a guanine exchange factor (GEF) for Rab7 protein family. Promotes the exchange of GDP to GTP, converting it from an inactive GDP-bound form into an active GTP- bound form. The active form is involved in protein trafficking from prevacuolar compartments (PVCs) to vacuoles. May serve as a linker between Rab5 and Rab7 protein families in PVCs and mediate PVC maturation.


ensembl_gene_id: Q5JL61
symbol: Q5JL61_ORYSJ
gene_biotype: protein_coding
description:
  NADPH-dependent diflavin oxidoreductase 1; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Transfers electrons from NADPH to the Fe-S cluster of the anamorsin/DRE2 homolog. Belongs to the NADPH-dependent diflavin oxidoreductase NDOR1 family. In the N-terminal section; belongs to the flavodoxin family.


ensembl_gene_id: Q5JL96
symbol: RZFP34
gene_biotype: protein_coding
description:
  Probable E3 ubiquitin-protein ligase RZFP34; Possesses transactivation activity in yeast cells. Involved in the regulation of stomatal aperture. May modulate the expression of genes that control stomata opening during heat shock or drought stress.


ensembl_gene_id: Q5JLA7
symbol: SAP13
gene_biotype: protein_coding
description:
  Zinc finger AN1 domain-containing stress-associated protein 13; May be involved in environmental stress response.


ensembl_gene_id: Q5JLD8
symbol: CIPK8
gene_biotype: protein_coding
description:
  CBL-interacting protein kinase 8; CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity); Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.


ensembl_gene_id: Q5JLF1
symbol: Q5JLF1_ORYSJ
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37; Belongs to the IPP transferase family.


ensembl_gene_id: Q5JLP4
symbol: CKX4
gene_biotype: protein_coding
description:
  Cytokinin dehydrogenase 4; Catalyzes the oxidation of cytokinins, a family of N(6)- substituted adenine derivatives that are plant hormones, where the substituent is an isopentenyl group; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.


ensembl_gene_id: Q5JLQ9
symbol: CIPK30
gene_biotype: protein_coding
description:
  CBL-interacting protein kinase 30; CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity); Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.


ensembl_gene_id: Q5JLR7
symbol: DOF5
gene_biotype: protein_coding
description:
  Dof zinc finger protein 5; Transcription factor that may transactivate seed storage protein genes in developing seeds.


ensembl_gene_id: Q5JLS2
symbol: CIPK12
gene_biotype: protein_coding
description:
  CBL-interacting protein kinase 12; Involved in drought stress tolerance. CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner; Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.


ensembl_gene_id: Q5JM04
symbol: OJ1414_E05.9
gene_biotype: protein_coding
description:
  Potassium channel KAT3; Probable inward-rectifying potassium channel. Assuming opened or closed conformations in response to the voltage difference across the membrane, the channel is activated by hyperpolarization (By similarity).


ensembl_gene_id: Q5JM82
symbol: MT2B
gene_biotype: protein_coding
description:
  Metallothionein-like protein 2B; Metallothioneins have a high content of cysteine residues that bind various heavy metals.


ensembl_gene_id: Q5JMA1
symbol: Q5JMA1_ORYSJ
gene_biotype: protein_coding
description:
  Starch synthase, chloroplastic/amyloplastic; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.


ensembl_gene_id: Q5JMF2
symbol: P0460E08.23
gene_biotype: protein_coding
description:
  Probable protein ABIL5; Involved in regulation of actin and microtubule organization. Part of a WAVE complex that activates the Arp2/3 complex (By similarity).


ensembl_gene_id: Q5JMF3
symbol: ROC9
gene_biotype: protein_coding
description:
  Homeobox-leucine zipper protein ROC9; Probable transcription factor; Belongs to the HD-ZIP homeobox family. Class IV subfamily.


ensembl_gene_id: Q5JMH0
symbol: HAK6
gene_biotype: protein_coding
description:
  Potassium transporter 6; High-affinity potassium transporter; Belongs to the HAK/KUP transporter (TC 2.A.72.3) family.


ensembl_gene_id: Q5JMM1
symbol: ARF3
gene_biotype: protein_coding
description:
  Auxin response factor 3; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).


ensembl_gene_id: Q5JMQ9
symbol: Q5JMQ9_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J023039I10, full insert sequence; Belongs to the mitochondrial carrier (TC 2.A.29) family.


ensembl_gene_id: Q5JMR9
symbol: P0483G10.36
gene_biotype: protein_coding
description:
  Thioredoxin Y, chloroplastic; Probable thiol-disulfide oxidoreductase that may participate in various redox reactions; Belongs to the thioredoxin family. Plant Y-type subfamily.


ensembl_gene_id: Q5JN07
symbol: SAP3
gene_biotype: protein_coding
description:
  Zinc finger A20 and AN1 domain-containing stress-associated protein 3; May be involved in environmental stress response.


ensembl_gene_id: Q5JN27
symbol: Q5JN27_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J013001N14, full insert sequence; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q5JN42
symbol: PSD2
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase 2 alpha chain; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine.


ensembl_gene_id: Q5JN63
symbol: CESA4
gene_biotype: protein_coding
description:
  Cellulose synthase A catalytic subunit 4 [UDP-forming]; Catalytic subunit of cellulose synthase terminal complexes ('rosettes'), required for beta-1,4-glucan microfibril crystallization, a major mechanism of the cell wall formation (By similarity). Involved in the secondary cell wall formation; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.


ensembl_gene_id: Q5JNC0
symbol: COQ5
gene_biotype: protein_coding
description:
  2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2).


ensembl_gene_id: Q5JNF1
symbol: Q5JNF1_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J023063A20, full insert sequence; Belongs to the peroxisomal membrane protein PXMP2/4 family.


ensembl_gene_id: Q5JNJ6
symbol: Q5JNJ6_ORYSJ
gene_biotype: protein_coding
description:
  Os01g0748000 protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.


ensembl_gene_id: Q5JNS0
symbol: TIP2
gene_biotype: protein_coding
description:
  Transcription factor TIP2; Transcription factor that binds to the E-box-containing promoter regions of the transcription factors TDR and EAT1, activating their expression. May have a role in specifying the cell pattern of the inner anther walls and functioning in meiosis progression. Required for male reproduction. Acts downstream of UDT1 and GAMYB, but upstream of TDR1 and EAT1 in pollen development. Belongs to the bHLH protein family.


ensembl_gene_id: Q5JNT2
symbol: AT4
gene_biotype: protein_coding
description:
  Acyl transferase 4; Grass-specific monolignol p-coumaroyl transferase involved in the biosynthesis of acylated monolignols or monolignol conjugates that serve as monomer precursors of lignin. Can synthesize sinapyl p- coumarate, p-coumaryl p-coumarate, sinapyl caffeate and p-coumaryl caffeate in vitro; Belongs to the plant acyltransferase family.


ensembl_gene_id: Q5JNT6
symbol: P0469E05.32
gene_biotype: protein_coding
description:
  Putative L-cysteine desulfhydrase 2; Catalyzes the production of hydrogen sulfide (H2S) from cysteine.


ensembl_gene_id: Q5JQD7
symbol: YSL12
gene_biotype: protein_coding
description:
  Probable metal-nicotianamine transporter YSL12; May be involved in the transport of nicotianamine-chelated metals; Belongs to the YSL (TC 2.A.67.2) family.


ensembl_gene_id: Q5K4R0
symbol: MADS47
gene_biotype: protein_coding
description:
  MADS-box transcription factor 47; Transcription factor that modulates expressions of multiple genes involved in cell signaling and gene transcription. Plays a negative regulatory role in brassinosteroid signaling.


ensembl_gene_id: Q5K5B6
symbol: OJ1316_A04.119
gene_biotype: protein_coding
description:
  DEAD-box ATP-dependent RNA helicase 57; Belongs to the DEAD box helicase family. DDX52/ROK1 subfamily.


ensembl_gene_id: Q5KQF5
symbol: CIPK22
gene_biotype: protein_coding
description:
  CBL-interacting protein kinase 22; CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity); Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.


ensembl_gene_id: Q5KQH7
symbol: CYP714D1
gene_biotype: protein_coding
description:
  Cytochrome P450 714D1; Catalyzes the 16alpha,17-epoxidation on non-13-hydroxylated gibberellins (GAs), including GA4, GA9, and GA12. No activity with GA1, GA20, GA53 or ent-kaurenoic acid. Reduces the biological activity of GAs.


ensembl_gene_id: Q5KQI6
symbol: SNAT1
gene_biotype: protein_coding
description:
  Serotonin N-acetyltransferase 1, chloroplastic; Catalyzes the N-acetylation of serotonin into N- acetylserotonin, the penultimate step in the synthesis of melatonin. Catalyzes in vitro the N-acetylation of tryptamine to produce N-acetyltryptamine, 5- methoxytryptamine to produce melatonin and tyramine to produce N- acetyltyramine. Acetyltransferase required for geminivirus infection and systemic spread (By similarity).


ensembl_gene_id: Q5KQN0
symbol: CAX2
gene_biotype: protein_coding
description:
  Vacuolar cation/proton exchanger 2; Vacuolar cation/proton exchanger (CAX). Translocates Ca(2+) and other metal ions into vacuoles using the proton gradient formed by H(+)-ATPase and H(+)-pyrophosphatase.


ensembl_gene_id: Q5KS50
symbol: CPT1
gene_biotype: protein_coding
description:
  Coleoptile phototropism protein 1; May act as a substrate-specific adapter of an E3 ubiquitin- protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Plays a role as signal transduction component in coleoptile phototropism and lateral translocation of auxin.


ensembl_gene_id: Q5KTQ9
symbol: CAX1c
gene_biotype: protein_coding
description:
  Vacuolar cation/proton exchanger 1c; Vacuolar cation/proton exchanger (CAX). Translocates Ca(2+) and other metal ions into vacuoles using the proton gradient formed by H(+)-ATPase and H(+)-pyrophosphatase.


ensembl_gene_id: Q5MBR3
symbol: NCED5
gene_biotype: protein_coding
description:
  9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic; Has a 11,12(11',12') 9-cis epoxycarotenoid cleavage activity. Catalyzes the first step of abscisic-acid biosynthesis from carotenoids.


ensembl_gene_id: Q5MBR5
symbol: NCED3
gene_biotype: protein_coding
description:
  9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic; Has a 11,12(11',12') 9-cis epoxycarotenoid cleavage activity. Catalyzes the first step of abscisic-acid biosynthesis from carotenoids; Belongs to the carotenoid oxygenase family.


ensembl_gene_id: Q5MBR6
symbol: NCED2
gene_biotype: protein_coding
description:
  9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic; Has a 11,12(11',12') 9-cis epoxycarotenoid cleavage activity. Catalyzes the first step of abscisic-acid biosynthesis from carotenoids.


ensembl_gene_id: Q5N6V8
symbol: RR26
gene_biotype: protein_coding
description:
  Two-component response regulator ORR26; Transcriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. Belongs to the ARR family. Type-B subfamily.


ensembl_gene_id: Q5N712
symbol: JMJ705
gene_biotype: protein_coding
description:
  Lysine-specific demethylase JMJ705; Histone demethylase that demethylates 'Lys-27' (H3K27me) of histone H3 with a specific activity for H3K27me3 and H3K27me2. No activity on H3K4me3, H3K9me3, H3K27me1 and H3K36me3. Involved in biotic stress response. May demethylate H3K27me3-marked defense-related genes and increase their basal and induced expression levels during pathogen infection.


ensembl_gene_id: Q5N725
symbol: FBA3
gene_biotype: protein_coding
description:
  Fructose-bisphosphate aldolase 3, cytoplasmic; Fructose-bisphosphate aldolase that plays a key role in glycolysis and gluconeogenesis.


ensembl_gene_id: Q5N739
symbol: Q5N739_ORYSJ
gene_biotype: protein_coding
description:
  5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor.


ensembl_gene_id: Q5N749
symbol: MOR1
gene_biotype: protein_coding
description:
  Protein MOR1; Microtubule-associated protein that is essential for cortical microtubules organization and function; Belongs to the TOG/XMAP215 family.


ensembl_gene_id: Q5N760
symbol: Q5N760_ORYSJ
gene_biotype: protein_coding
description:
  NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.


ensembl_gene_id: Q5N7A3
symbol: LAC6
gene_biotype: protein_coding
description:
  Laccase-6; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family.


ensembl_gene_id: Q5N7A7
symbol: ERH1
gene_biotype: protein_coding
description:
  Phosphatidylinositol:ceramide inositolphosphotransferase; Catalyzes the transfer of the phosphorylinositol group from phosphatidylinositol (PI) to phytoceramide, an essential step in sphingolipid biosynthesis. May play an important role in modulating plant programmed cell death (PCD) associated with defense by promoting sphingolipid metabolism and regulating ceramide accumulation.


ensembl_gene_id: Q5N7B4
symbol: LAC7
gene_biotype: protein_coding
description:
  Laccase-7; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family.


ensembl_gene_id: Q5N7C7
symbol: LG2
gene_biotype: protein_coding
description:
  Transcription factor LG2; Transcriptional regulator involved in defense response (By similarity). Acts as transcriptional activator in vitro ; Belongs to the bZIP family.


ensembl_gene_id: Q5N7W3
symbol: RPN2
gene_biotype: protein_coding
description:
  Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...]


ensembl_gene_id: Q5N7W4
symbol: P0456E05.41-1
gene_biotype: protein_coding
description:
  DEAD-box ATP-dependent RNA helicase 30; ATP-dependent RNA helicase involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing.


ensembl_gene_id: Q5N7Y9
symbol: Q5N7Y9_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J033036K01, full insert sequence; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: Q5N800
symbol: NYC1
gene_biotype: protein_coding
description:
  Probable chlorophyll(ide) b reductase NYC1, chloroplastic; Required for proper chloroplast degradation. Involved in chlorophyll b degradation; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Q5N806
symbol: OsJ_04530
gene_biotype: protein_coding
description:
  Cysteine proteinase inhibitor 4; Specific inhibitor of cysteine proteinases. Probably involved in the regulation of endogenous processes and in defense against pests and pathogens (By similarity); Belongs to the cystatin family. Phytocystatin subfamily.


ensembl_gene_id: Q5N808
symbol: SPPL3
gene_biotype: protein_coding
description:
  Signal peptide peptidase-like 3; Intramembrane-cleaving aspartic protease (I-CLiP) that cleaves type II membrane signal peptides in the hydrophobic plane of the membrane; Belongs to the peptidase A22B family.


ensembl_gene_id: Q5N829
symbol: ZIP4
gene_biotype: protein_coding
description:
  TPR repeat-containing protein ZIP4; Required for crossover formation, complete synapsis of homologous chromosomes and bivalent formation during meiosis. Is specific to recombination events resulting in interference-sensitive crossovers (class I meiotic crossover) and works cooperatively with MER3 to promote crossovers.


ensembl_gene_id: Q5N842
symbol: Q5N842_ORYSJ
gene_biotype: protein_coding
description:
  Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.


ensembl_gene_id: Q5N854
symbol: Q5N854_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J033101F17, full insert sequence; Belongs to the protein kinase superfamily. Tyr protein kinase family.


ensembl_gene_id: Q5N855
symbol: CSTLP3
gene_biotype: protein_coding
description:
  CMP-sialic acid transporter 3; Sugar transporter involved in the transport of CMP-sialic acid from the cytoplasm into the Golgi. May transport important nucleotide sugars such as CMP-Kdo (2-keto-3-deoxy-D-manno-octulosonic acid) in physiological conditions; Belongs to the nucleotide-sugar transporter family. CMP- Sialate:CMP antiporter (TC 2.A.7.12) subfamily.


ensembl_gene_id: Q5N870
symbol: DCL3A
gene_biotype: protein_coding
description:
  Endoribonuclease Dicer homolog 3a; Probably involved in the RNA silencing pathway. May cleave double-stranded RNA to produce short 21-24 nucleotides (nt) RNAs which target the selective destruction of complementary RNAs (By similarity).


ensembl_gene_id: Q5N892
symbol: OsJ_04119
gene_biotype: protein_coding
description:
  Auxin transporter-like protein 1; Carrier protein involved in proton-driven auxin influx. May mediate the formation of auxin gradient from developing leaves (site of auxin biosynthesis) to tips (By similarity).


ensembl_gene_id: Q5N8F2
symbol: ILL2
gene_biotype: protein_coding
description:
  IAA-amino acid hydrolase ILR1-like 2; Hydrolyzes certain amino acid conjugates of the plant growth regulator indole-3-acetic acid (IAA); Belongs to the peptidase M20 family.


ensembl_gene_id: Q5N8G1
symbol: ISPD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic; Enzyme of the plastid non-mevalonate pathway for isoprenoid biosynthesis that catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). Is essential for chloroplast development (By similarity).


ensembl_gene_id: Q5N8J1
symbol: SWEET2B
gene_biotype: protein_coding
description:
  Bidirectional sugar transporter SWEET2b; Mediates both low-affinity uptake and efflux of sugar across the plasma membrane; Belongs to the SWEET sugar transporter family.


ensembl_gene_id: Q5N8J3
symbol: BBD1
gene_biotype: protein_coding
description:
  Bifunctional nuclease 1; Bifunctional nuclease with both RNase and DNase activities. Involved in basal defense response. Participates in abscisic acid- derived callose deposition following infection by a necrotrophic pathogen.


ensembl_gene_id: Q5N8Q3
symbol: PSS3
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--serine O-phosphatidyltransferase 3; Catalyzes a base-exchange reaction in which the polar head group of phosphatidylethanolamine (PE) or phosphatidylcholine (PC) is replaced by L-serine; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: Q5N8Q4
symbol: ORC4
gene_biotype: protein_coding
description:
  Origin of replication complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent. The specific DNA sequences that define origins of replication have not been identified yet. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication; Belongs to the ORC4 family.


ensembl_gene_id: Q5N942
symbol: SAPK4
gene_biotype: protein_coding
description:
  Serine/threonine-protein kinase SAPK4; May play a role in signal transduction of hyperosmotic response.


ensembl_gene_id: Q5N9A1
symbol: P0557A01.8
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1, chloroplastic; Catalyzes the committed step to the synthesis of the acidic phospholipids. Transfers specifically a phosphatidyl group from CDP- diacylglycerol to glycerol-3-phosphate to form phosphatidylglycerophosphate (By similarity).


ensembl_gene_id: Q5N9C8
symbol: Q5N9C8_ORYSJ
gene_biotype: protein_coding
description:
  Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.


ensembl_gene_id: Q5N9F1
symbol: LSM3
gene_biotype: protein_coding
description:
  U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.


ensembl_gene_id: Q5N9J9
symbol: P0446G04.41
gene_biotype: protein_coding
description:
  Probable phytol kinase 2, chloroplastic; Involved in the activation and reutilization of phytol from chlorophyll degradation in plant metabolism, including tocopherol biosynthesis. Catalyzes the conversion of phytol to phytol monophosphate (PMP) (By similarity); Belongs to the polyprenol kinase family.


ensembl_gene_id: Q5N9Q7
symbol: OsJ_03102
gene_biotype: protein_coding
description:
  Peptidyl-tRNA hydrolase, mitochondrial; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis.


ensembl_gene_id: Q5N9V4
symbol: Q5N9V4_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:002-116-D07, full insert sequence; Belongs to the bacterial ribosomal protein bL17 family.


ensembl_gene_id: Q5N9W4
symbol: LAC5
gene_biotype: protein_coding
description:
  Putative laccase-5; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family.


ensembl_gene_id: Q5N9X2
symbol: LAC4
gene_biotype: protein_coding
description:
  Laccase-4; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family.


ensembl_gene_id: Q5NA06
symbol: P0031D11.22-1
gene_biotype: protein_coding
description:
  Coatomer subunit zeta-3; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity). The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-disso [...]


ensembl_gene_id: Q5NA18
symbol: MTP5
gene_biotype: protein_coding
description:
  Metal tolerance protein 5; Involved in sequestration of excess metal in the cytoplasm into vacuoles to maintain metal homeostasis; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. SLC30A subfamily.


ensembl_gene_id: Q5NAB6
symbol: EIF6
gene_biotype: protein_coding
description:
  Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.


ensembl_gene_id: Q5NAI4
symbol: OsJ_03214
gene_biotype: protein_coding
description:
  Phospholipase A1-II 5; Acylhydrolase that catalyzes the hydrolysis of phospholipids at the sn-1 position; Belongs to the AB hydrolase superfamily. Lipase family.


ensembl_gene_id: Q5NAI7
symbol: PAO1
gene_biotype: protein_coding
description:
  Polyamine oxidase 1; Flavoenzyme involved in polyamine back-conversion. Catalyzes the oxidation of the secondary amino group of polyamines, such as spermine and its acetyl derivatives. Substrate preference is thermospermine > spermine > norspermine > N(1)-acetylspermine. No activity detected when putrescine or spermidine are used as substrates. Plays an important role in the regulation of polyamine intracellular concentration (Probable). Belongs to the flavin monoamine oxidase family.


ensembl_gene_id: Q5NAJ0
symbol: Q5NAJ0_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J013050L21, full insert sequence; Belongs to the mitochondrial carrier (TC 2.A.29) family.


ensembl_gene_id: Q5NAN5
symbol: GLK2
gene_biotype: protein_coding
description:
  Probable transcription factor GLK2; Probable transcriptional activator that promotes chloroplast development. Acts as an activator of nuclear photosynthetic genes involved in chlorophyll biosynthesis, light harvesting, and electron transport (By similarity).


ensembl_gene_id: Q5NAT0
symbol: GLU5
gene_biotype: protein_coding
description:
  Endoglucanase 2; Hydrolyzes 1,4-beta-glycosyl linkages of 1,4-beta-glucans and 1,3-1,4-beta-glucans. Possesses broad substrate specificity for hemicelluloses of type II cell walls. Substrate preference is carboxymethyl-cellulose > 1,3-1,4-beta-glucan > lichenan > arabinoxylan > phospho-swollen cellulose > xylan > glucomannan. May participate in lateral root development.


ensembl_gene_id: Q5NAU4
symbol: Q5NAU4_ORYSJ
gene_biotype: protein_coding
description:
  Os01g0218800 protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.


ensembl_gene_id: Q5NAY4
symbol: HDH
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase, chloroplastic; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: Q5NAZ7
symbol: GH3.3
gene_biotype: protein_coding
description:
  Jasmonoyl--L-amino acid synthetase GH3.3; Catalyzes the synthesis of jasmonate-amino acid conjugates by adenylation. Catalyzes the conjugation of jasmonate (JA) to Ile when expressed in a heterologous system (E.Coli). Catalyzes in vitro the conjugation of jasmonate (JA) to Ile, Phe, Leu, Met, Val and Trp. May catalyze the synthesis of indole-3-acetic acid (IAA)-amino acid conjugates, providing a mechanism for the plant to cope with the presence of excess auxin (By similarity); Belongs to the IAA-amido conjugating enzyme family.


ensembl_gene_id: Q5NAZ9
symbol: SWEET3B
gene_biotype: protein_coding
description:
  Bidirectional sugar transporter SWEET3b; Mediates both low-affinity uptake and efflux of sugar across the plasma membrane.


ensembl_gene_id: Q5NB25
symbol: IAA3
gene_biotype: protein_coding
description:
  Auxin-responsive protein IAA3; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.


ensembl_gene_id: Q5NB83
symbol: OsJ_01031
gene_biotype: protein_coding
description:
  Probable protein ABIL3; Involved in regulation of actin and microtubule organization. Part of a WAVE complex that activates the Arp2/3 complex (By similarity).


ensembl_gene_id: Q5NB85
symbol: ARF1
gene_biotype: protein_coding
description:
  Auxin response factor 1; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).


ensembl_gene_id: Q5NBI2
symbol: ARP6
gene_biotype: protein_coding
description:
  Actin-related protein 6; Component of the SWR1 complex which mediates the ATP- dependent exchange of histone H2A for the H2A variant H2A.F/Z leading to transcriptional regulation of selected genes by chromatin remodeling. Involved in several developmental processes. May be involved in the regulation of pathogenesis-related proteins (PRs) (By similarity).


ensembl_gene_id: Q5NBJ3
symbol: GYRB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B, chloroplastic/mitochondrial; A type II topoisomerase that negatively supercoils closed circular double-stranded DNA in an ATP-dependent manner.


ensembl_gene_id: Q5NBM8
symbol: CSA
gene_biotype: protein_coding
description:
  Transcription factor CSA; Transcription factor required for sugar partitioning from leaves to anthers during male reproductive development. Required for the production of functional pollen grains. Binds to the promoter of the anther-specific sugar transporter MST8 and regulates its expression. Regulates the expression of genes involved in sugar partitioning in flower, such as the sugar transporter SUT3, the invertase INV4, the UDP-glucose pyrophosphorylase UGP2 and the starch synthase WAXY.


ensembl_gene_id: Q5NBN9
symbol: AGO15
gene_biotype: protein_coding
description:
  Protein argonaute 15; Probably involved in the RNA silencing pathway. May bind to short RNAs such as microRNAs (miRNAs) or short interfering RNAs (siRNAs), and represses the translation of mRNAs which are complementary to them (By similarity).


ensembl_gene_id: Q5NBP9
symbol: OsJ_01291
gene_biotype: protein_coding
description:
  Glucosidase 2 subunit beta; Regulatory subunit of glucosidase II. May be required for defense response elicited by pathogen-associated molecular patterns (PAMPs) (By similarity).


ensembl_gene_id: Q5NTH3
symbol: SK2
gene_biotype: protein_coding
description:
  Shikimate kinase 2, chloroplastic; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate.


ensembl_gene_id: Q5NTH4
symbol: SK1
gene_biotype: protein_coding
description:
  Shikimate kinase 1, chloroplastic; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate.


ensembl_gene_id: Q5QLR2
symbol: GRXS5
gene_biotype: protein_coding
description:
  Monothiol glutaredoxin-S5; May only reduce GSH-thiol disulfides, but not protein disulfides; Belongs to the glutaredoxin family. CC-type subfamily.


ensembl_gene_id: Q5QLR5
symbol: ZFP1
gene_biotype: protein_coding
description:
  Probable E3 ubiquitin-protein ligase ZFP1; Probable E3 ubiquitin-protein ligase. Belongs to the RING-type zinc finger family.


ensembl_gene_id: Q5QLS7
symbol: MRL7
gene_biotype: protein_coding
description:
  Thioredoxin-like fold domain-containing protein MRL7 homolog, chloroplastic; Plays an essential role in early steps of chloroplast development. Involved in the regulation of plastid gene expression. Required for the proper function of the plastid transcriptional machinery and protein accumulation in thylakoid membranes. May function as molecular chaperone to ensure proper organization of the nucleoids in chloroplasts.


ensembl_gene_id: Q5QM06
symbol: RH2
gene_biotype: protein_coding
description:
  NRR repressor homolog 2; Binds to and weakly represses NPR1/NH1-mediated transcriptional activation of LG2 in vitro.


ensembl_gene_id: Q5QM25
symbol: IRX9L
gene_biotype: protein_coding
description:
  Probable beta-1,4-xylosyltransferase IRX9L; Probable beta-1,4-xylosyltransferase involved in xylan biosynthesis in cell walls.


ensembl_gene_id: Q5QM84
symbol: TPC1
gene_biotype: protein_coding
description:
  Two pore calcium channel protein 1; May function as one of the major voltage-gated Ca(2+) channel (VDCC) across the plasma membrane. May be involved in the regulation of cytosolic Ca(2+) and in growth and development. Acts as the major ROS- responsive Ca(2+) channel and is the possible target of Al-dependent inhibition. Determines sensitivity to T.viride xylanase elicitor. Plays a regulatory role in elicitor-induced defense responses and hypersensitive cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family. Two pore calcium channel subfamily.


ensembl_gene_id: Q5QM91
symbol: Q5QM91_ORYSJ
gene_biotype: protein_coding
description:
  RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: Q5QMG3
symbol: NFYB2
gene_biotype: protein_coding
description:
  Nuclear transcription factor Y subunit B-2; Component of the NF-Y/HAP transcription factor complex. The NF-Y complex stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters. May regulate the expression of photosynthetic genes, and may be involved in chloroplast and amyloplast development; Belongs to the NFYB/HAP3 subunit family.


ensembl_gene_id: Q5QMM3
symbol: WOX8
gene_biotype: protein_coding
description:
  WUSCHEL-related homeobox 8; Transcription factor which may be involved in developmental processes; Belongs to the WUS homeobox family.


ensembl_gene_id: Q5QMN3
symbol: P0419B01.12
gene_biotype: protein_coding
description:
  DEAD-box ATP-dependent RNA helicase 20; ATP-dependent RNA helicase involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing; Belongs to the DEAD box helicase family. DDX5/DBP2 subfamily.


ensembl_gene_id: Q5QMN4
symbol: RDR4
gene_biotype: protein_coding
description:
  Probable RNA-dependent RNA polymerase 4; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs).


ensembl_gene_id: Q5QMN5
symbol: RDR3
gene_biotype: protein_coding
description:
  Probable RNA-dependent RNA polymerase 3; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs).


ensembl_gene_id: Q5QMZ9
symbol: HOX29
gene_biotype: protein_coding
description:
  Homeobox-leucine zipper protein HOX29; Probable transcription factor that may be necessary for the proper patterning of vascular bundles.


ensembl_gene_id: Q5QN75
symbol: MKK1
gene_biotype: protein_coding
description:
  Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q5QNA6
symbol: SCRL2_ORYSJ
gene_biotype: protein_coding
description:
  SCAR-like protein 2; Involved in regulation of actin and microtubule organization. Part of a WAVE complex that activates the Arp2/3 complex (By similarity); Belongs to the SCAR/WAVE family.


ensembl_gene_id: Q5QNB8
symbol: GF14G
gene_biotype: protein_coding
description:
  14-3-3-like protein GF14-G; Is associated with a DNA binding complex that binds to the G box, a well-characterized cis-acting DNA regulatory element found in plant genes.


ensembl_gene_id: Q5QNI1
symbol: P0031E09.16
gene_biotype: protein_coding
description:
  Potassium channel KAT2; Probable inward-rectifying potassium channel. Assuming opened or closed conformations in response to the voltage difference across the membrane, the channel is activated by hyperpolarization (By similarity); Belongs to the potassium channel family. Plant (TC 1.A.1.4) subfamily.


ensembl_gene_id: Q5QNI2
symbol: NCL1
gene_biotype: protein_coding
description:
  Sodium/calcium exchanger NCL1; May function as a sodium/calcium exchanger (NCX) and participate in the maintenance of calcium homeostasis. May play a role abiotic stress responses.


ensembl_gene_id: Q5QNM6
symbol: CIPK13
gene_biotype: protein_coding
description:
  Putative CBL-interacting protein kinase 13; CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity).


ensembl_gene_id: Q5SML4
symbol: HK2
gene_biotype: protein_coding
description:
  Probable histidine kinase 2; Cytokinin receptor related to bacterial two-component regulators. Functions as a histidine kinase and transmits the stress signal to a downstream MAPK cascade.


ensembl_gene_id: Q5SML5
symbol: RR22
gene_biotype: protein_coding
description:
  Two-component response regulator ORR22; Transcriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins (By similarity). Functions as a response regulator in response to cytokinins ; Belongs to the ARR family. Type-B subfamily.


ensembl_gene_id: Q5SMM6
symbol: HCT4
gene_biotype: protein_coding
description:
  Hydroxycinnamoyltransferase 4; Hydroxycinnamoyl transferase that catalyzes in vitro the transfer of an acyl from p-coumaryol-CoA to glycerol or shikimate, to produce 2-O-p-coumaroyl glyceride or coumaroyl shikimate, respectively. Quercetin, glutarate, or malate do not serve as acyl acceptors in vitro. Can use feruloyl-CoA and caffeoyl-CoA as acyl donors.


ensembl_gene_id: Q5SMM8
symbol: PHT1
gene_biotype: protein_coding
description:
  Putrescine hydroxycinnamoyltransferase 1; Hydroxycinnamoyl transferase that catalyzes the transfer of an acyl from p-coumaryol-CoA to putrescine, to produce coumaroyl putrescine; Belongs to the plant acyltransferase family.


ensembl_gene_id: Q5SMQ0
symbol: PHT2
gene_biotype: protein_coding
description:
  Putrescine hydroxycinnamoyltransferase 2; Hydroxycinnamoyl transferase that catalyzes the transfer of an acyl from p-coumaryol-CoA to putrescine, to produce coumaroyl putrescine.


ensembl_gene_id: Q5SMQ9
symbol: PIN1A
gene_biotype: protein_coding
description:
  Auxin efflux carrier component 1a; Acts as a component of the auxin efflux carrier. Seems to be involved in the polar auxin transport which may promote adventitious root emergence and control tillering.


ensembl_gene_id: Q5SMU7
symbol: ORC1
gene_biotype: protein_coding
description:
  Origin of replication complex subunit 1; Essential protein (By similarity). Component of the origin recognition complex (ORC) that binds origins of replication. It has a role in both chromosomal replication and mating type transcriptional silencing. Binds to the ARS consensus sequence (ACS) of origins of replication (By similarity). H3K4me3 effector that regulates positively the transcription of a subset of genes (By similarity). Required for cell proliferation.


ensembl_gene_id: Q5SMY5
symbol: GRXS2
gene_biotype: protein_coding
description:
  Monothiol glutaredoxin-S2; May only reduce GSH-thiol disulfides, but not protein disulfides; Belongs to the glutaredoxin family. CC-type subfamily.


ensembl_gene_id: Q5SN59
symbol: Q5SN59_ORYSJ
gene_biotype: protein_coding
description:
  Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.


ensembl_gene_id: Q5SND7
symbol: Q5SND7_ORYSJ
gene_biotype: protein_coding
description:
  cDNA, clone: J100072I17, full insert sequence; Belongs to the iron/ascorbate-dependent oxidoreductase family.


ensembl_gene_id: Q5SNH7
symbol: Q5SNH7_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:001-003-F04, full insert sequence; Belongs to the eukaryotic ribosomal protein P1/P2 family.


ensembl_gene_id: Q5SNL7
symbol: OsJ_20287
gene_biotype: protein_coding
description:
  Fanconi-associated nuclease 1 homolog; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.


ensembl_gene_id: Q5TKD8
symbol: TRL2_ORYSJ
gene_biotype: protein_coding
description:
  Thioredoxin-like 2, chloroplastic; Probable thiol-disulfide oxidoreductase that may participate in various redox reactions; Belongs to the thioredoxin family.


ensembl_gene_id: Q5TKF9
symbol: LSM8
gene_biotype: protein_coding
description:
  U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.


ensembl_gene_id: Q5TKG3
symbol: CAX1b
gene_biotype: protein_coding
description:
  Vacuolar cation/proton exchanger 1b; Vacuolar cation/proton exchanger (CAX). Translocates Ca(2+) and other metal ions into vacuoles using the proton gradient formed by H(+)-ATPase and H(+)-pyrophosphatase.


ensembl_gene_id: Q5TKP8
symbol: LOGL7
gene_biotype: protein_coding
description:
  Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL7; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms (By similarity).


ensembl_gene_id: Q5U9F2
symbol: GNA1
gene_biotype: protein_coding
description:
  Glucosamine 6-phosphate N-acetyltransferase 1; Acetyltransferase involved in de novo biosynthesis of UDP-N- acetylglucosamine (UDP-GlcNAc) in roots and is required for maintaining normal root cell shape. UDP-GlcNAc is an essential metabolite that serves as an initial sugar donor for N-glycan synthesis and thus plays an important role in protein and lipid glycosylation. Belongs to the acetyltransferase family. GNA1 subfamily.


ensembl_gene_id: Q5UG13
symbol: CRL1
gene_biotype: protein_coding
description:
  LOB domain-containing protein CRL1; Acts as positive regulator of adventitious (crown) root formation by promoting its initiation. Acts as positive regulator of lateral root formation. Regulated by the auxin response factor and transcriptional activator ARF23/ARF1. Involved in auxin-mediated cell dedifferentiation, and may promote the initial cell division in the pericycle cells adjacent to the peripheral vascular cylinder at the base of the stem. May act upstream of the gene regulatory network controlling adventitious root (crown) development ; Belongs to the LOB domain-containing pro [...]


ensembl_gene_id: Q5VMI0
symbol: CGT
gene_biotype: protein_coding
description:
  UDP-glucose:2-hydroxyflavanone C-glucosyltransferase; UDP-glucose-dependent glucosyltransferase catalyzing the c- glucosylation of 2-hydroxyflavanones.


ensembl_gene_id: Q5VMJ3
symbol: OsJ_019338
gene_biotype: protein_coding
description:
  Profilin LP04; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations. By binding to PIP2, it inhibits the formation of IP3 and DG (By similarity).


ensembl_gene_id: Q5VMN4
symbol: Q5VMN4_ORYSJ
gene_biotype: protein_coding
description:
  Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.


ensembl_gene_id: Q5VMP0
symbol: D3
gene_biotype: protein_coding
description:
  F-box/LRR-repeat MAX2 homolog; Involved in strigolactone (SL) signaling. Required for responses to SLs and the establishment of arbuscular mycorrhiza symbiosis in rice. Strigolactone-dependent association of D3 with D14 and D53 (a repressor of SL signaling) triggers D53 ubiquitination and degradation. Controls tillering by suppressing axillary bud activity. Tiller is a specialized grain- bearing branch that is formed on the unelongated basal internode and grows independently of the mother stem (culm) by means of its own adventitious roots.


ensembl_gene_id: Q5VMP2
symbol: Q5VMP2_ORYSJ
gene_biotype: protein_coding
description:
  7,8-dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: Q5VMQ5
symbol: OJ1126_G08.1
gene_biotype: protein_coding
description:
  CRS2-associated factor 1, chloroplastic; Required for the splicing of group IIB introns in chloroplasts. Forms splicing particles with CRS2. Interacts with RNA and confers intron specificity of the splicing particles (By similarity).


ensembl_gene_id: Q5VN06
symbol: CLF
gene_biotype: protein_coding
description:
  Histone-lysine N-methyltransferase CLF; Polycomb group (PcG) protein. Catalytic subunit of some PcG multiprotein complex, which methylates 'Lys-27' of histone H3, leading to transcriptional repression of the affected target genes. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development (Probable). Involved in the regulation of flowering. Represses flowering under long day ( [...]


ensembl_gene_id: Q5VN19
symbol: MPK11
gene_biotype: protein_coding
description:
  Mitogen-activated protein kinase 11; Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MAP kinase subfamily.


ensembl_gene_id: Q5VND6
symbol: NAP1;1
gene_biotype: protein_coding
description:
  Nucleosome assembly protein 1;1; May modulate chromatin structure by regulation of nucleosome assembly/disassembly.


ensembl_gene_id: Q5VNJ0
symbol: Q5VNJ0_ORYSJ
gene_biotype: protein_coding
description:
  tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family.


ensembl_gene_id: Q5VNM3
symbol: EIF4A3A
gene_biotype: protein_coding
description:
  Eukaryotic initiation factor 4A-III homolog A; ATP-dependent RNA helicase. Core component of the splicing- dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the core components remain bound to spliced mRNAs throu [...]


ensembl_gene_id: Q5VNN5
symbol: PDF1B
gene_biotype: protein_coding
description:
  Peptide deformylase 1B, chloroplastic; Removes the formyl group from the N-terminal Met of newly synthesized proteins; Belongs to the polypeptide deformylase family.


ensembl_gene_id: Q5VNU3
symbol: P0001H02.27
gene_biotype: protein_coding
description:
  Probable protein transport Sec1b; Involved in the vesicle trafficking. Binds syntaxins (By similarity).


ensembl_gene_id: Q5VNW5
symbol: IMCEL2
gene_biotype: protein_coding
description:
  Probable isoprenylcysteine alpha-carbonyl methylesterase ICMEL2; Catalyzes the demethylation of isoprenylcysteine methylesters.


ensembl_gene_id: Q5VP70
symbol: PIN3A
gene_biotype: protein_coding
description:
  Auxin efflux carrier component 3a; Acts as a component of the auxin efflux carrier. Involved in the polar auxin transport which may regulate crown root development and response to water stress.


ensembl_gene_id: Q5VPA8
symbol: Q5VPA8_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J013099M07, full insert sequence; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q5VPE3
symbol: HOX2
gene_biotype: protein_coding
description:
  Homeobox-leucine zipper protein HOX2; Probable transcription factor that binds to the DNA sequence 5'-CAAT[GC]ATTG-3'; Belongs to the HD-ZIP homeobox family. Class II subfamily.


ensembl_gene_id: Q5VPG8
symbol: MSRA5
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase A5; Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. MSRA family specifically reduces the MetSO S- enantiomer (By similarity).


ensembl_gene_id: Q5VQ09
symbol: KINUB
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-UB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. Ungrouped subfamily.


ensembl_gene_id: Q5VQ69
symbol: OsJ_20104
gene_biotype: protein_coding
description:
  Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.


ensembl_gene_id: Q5VQ78
symbol: COB21_ORYSJ
gene_biotype: protein_coding
description:
  Coatomer subunit beta'-1; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity).


ensembl_gene_id: Q5VQG4
symbol: RFS
gene_biotype: protein_coding
description:
  Galactinol--sucrose galactosyltransferase; Transglycosidase operating by a ping-pong reaction mechanism. Involved in the synthesis of raffinose, a major soluble carbohydrate in seeds, roots and tubers. Specific for galactinol and p-nitrophenyl- alpha-D-galactoside as galactosyl donors. Able to utilize sucrose, lactose, 4-beta-galactobiose, N-acetyl-D-lactosamine, trehalose and lacto-N-biose as acceptors. May also act as a glycoside hydrolase. Belongs to the glycosyl hydrolases 36 family.


ensembl_gene_id: Q5VQG8
symbol: TAR2
gene_biotype: protein_coding
description:
  Tryptophan aminotransferase-related protein 2; Probable tryptophan aminotransferase involved in auxin (IAA) biosynthesis. Required for auxin production to initiate multiple change in growth in response to environmental and developmental cues. Functions upstream of YUCCA1 in auxin biosynthesis. Required for polar auxin transport.


ensembl_gene_id: Q5VQK9
symbol: CEST
gene_biotype: protein_coding
description:
  Protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic; Involved in light-induced chloroplast development and growth. Involved in the plant response to abiotic and photooxidative stresses. May be involved in the suppression of photooxidative damage.


ensembl_gene_id: Q5VQL1
symbol: P0583G08.30-1
gene_biotype: protein_coding
description:
  DEAD-box ATP-dependent RNA helicase 14; ATP-dependent RNA helicase involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing; Belongs to the DEAD box helicase family. DDX5/DBP2 subfamily.


ensembl_gene_id: Q5VQL3
symbol: PPT3
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate/phosphate translocator 3, chloroplastic; Phosphoenolpyruvate/phosphate translocator that transports phosphoenolpyruvate (PEP) and dihydroxyacetone phosphate. Belongs to the TPT transporter family. PPT (TC 2.A.7.9) subfamily.


ensembl_gene_id: Q5VQL9
symbol: OsSERK1
gene_biotype: protein_coding
description:
  cDNA clone:J013144J12, full insert sequence; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q5VQM7
symbol: Q5VQM7_ORYSJ
gene_biotype: protein_coding
description:
  cDNA, clone: J065161B03, full insert sequence; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q5VQQ5
symbol: CPK2
gene_biotype: protein_coding
description:
  Calcium-dependent protein kinase 2; May play a role in signal transduction pathways that involve calcium as a second messenger.


ensembl_gene_id: Q5VR89
symbol: SIP1-1
gene_biotype: protein_coding
description:
  Aquaporin SIP1-1; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes; Belongs to the MIP/aquaporin (TC 1.A.8) family. SIP (TC 1.A.8.10) subfamily.


ensembl_gene_id: Q5VRB2
symbol: BASS2
gene_biotype: protein_coding
description:
  Probable sodium/metabolite cotransporter BASS2, chloroplastic; May function as sodium-coupled metabolite transporter across the chloroplast envelope.


ensembl_gene_id: Q5VRD1
symbol: IAA1
gene_biotype: protein_coding
description:
  Auxin-responsive protein IAA1; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.


ensembl_gene_id: Q5VRF5
symbol: Q5VRF5_ORYSJ
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: Q5VRG3
symbol: OsJ_20263
gene_biotype: protein_coding
description:
  Proteasome subunit alpha type-4-2; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity; Belongs to the peptidase T1A family.


ensembl_gene_id: Q5VRI5
symbol: CYP93G2
gene_biotype: protein_coding
description:
  Cytochrome P450 93G2; Functions as flavanone 2-hydroxylase that catalyzes the direct conversion of flavanones to 2-hydroxyflavanones. In vitro, can convert naringenin and eriodictyol to the corresponding 2- hydroxyflavanones. Generates 2-hydroxyflavanone substrates for C- glycosylflavone biosynthesis by the glycosyltransferase CGT. Belongs to the cytochrome P450 family.


ensembl_gene_id: Q5VRL3
symbol: OsJ_19901
gene_biotype: protein_coding
description:
  Superoxide dismutase [Fe] 1, chloroplastic; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.


ensembl_gene_id: Q5VRM0
symbol: ACBP2
gene_biotype: protein_coding
description:
  Acyl-CoA-binding domain-containing protein 2; Binds medium- and long-chain acyl-CoA esters with high affinity. Can interact in vitro with linolenoyl-CoA. Binds palmitoyl-CoA and linoleoyl-CoA in vitro. Binds phosphatidic acid (PA) and phosphatidylcholine (PC) in vitro. May play a role in the biosynthesis of phospholipids. Belongs to the ACBP family.


ensembl_gene_id: Q5VRM7
symbol: KAO
gene_biotype: protein_coding
description:
  Ent-kaurenoic acid oxidase; Involved in gibberellin (GA) biosynthesis. Catalyzes three successive oxidations of ent-kaurenoic acid giving gibberellin 12 (GA12), a key step in GAs biosynthesis. GAs, which are involved many processes, including stem elongation, play a central role in plant development (Probable). Required for pollen germination and elongation.


ensembl_gene_id: Q5VRN0
symbol: OsJ_19856
gene_biotype: protein_coding
description:
  UMP-CMP kinase 1; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.


ensembl_gene_id: Q5VRR0
symbol: IAA20
gene_biotype: protein_coding
description:
  Auxin-responsive protein IAA20; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.


ensembl_gene_id: Q5VRW2
symbol: NHO1
gene_biotype: protein_coding
description:
  Transcription factor NIGTH1; Probable transcription factor that may play a role in regulatory networks controlling development and metabolism.


ensembl_gene_id: Q5VRX8
symbol: Q5VRX8_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J013001P05, full insert sequence; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: Q5VS72
symbol: PRMT7
gene_biotype: protein_coding
description:
  Protein arginine N-methyltransferase 7; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA).


ensembl_gene_id: Q5VS74
symbol: Q5VS74_ORYSJ
gene_biotype: protein_coding
description:
  Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: Q5VSA8
symbol: P0493C11.7
gene_biotype: protein_coding
description:
  Barley B recombinant-like protein D; Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes; Belongs to the BBR/BPC family.


ensembl_gene_id: Q5VSB7
symbol: P0535G04.31
gene_biotype: protein_coding
description:
  Superoxide dismutase [Fe] 2, chloroplastic; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.


ensembl_gene_id: Q5W659
symbol: G1L9
gene_biotype: protein_coding
description:
  Protein G1-like9; Probable transcription regulator that acts as a developmental regulator by promoting cell growth in response to light; Belongs to the plant homeotic and developmental regulators ALOG protein family.


ensembl_gene_id: Q5W670
symbol: IAA18
gene_biotype: protein_coding
description:
  Auxin-responsive protein IAA18; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.


ensembl_gene_id: Q5W6B9
symbol: HAP2A
gene_biotype: protein_coding
description:
  Protein HAPLESS 2-A; Required for male fertility. Plays a role in pollen tube guidance and successful gamete attachment. Essential for the fusion of gametes during double fertilization, where one male gamete fuses with the egg to produce a zygote, and another male gamete fuses with the central cell to produce the endosperm. Mediates the fusion of cell membranes. Not required for pollen tube outgrowth (By similarity); Belongs to the HAP2/GCS1 family.


ensembl_gene_id: Q5W6H5
symbol: CHLG
gene_biotype: protein_coding
description:
  Chlorophyll synthase, chloroplastic; Involved in one of the last steps of the biosynthesis of chlorophyll a.


ensembl_gene_id: Q5W6L9
symbol: KIN12C
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-12C; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-12 subfamily.


ensembl_gene_id: Q5W6R4
symbol: DREB2B
gene_biotype: protein_coding
description:
  Dehydration-responsive element-binding protein 2B; Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3' of the cis-acting dehydration-responsive element (DRE). Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription. Involved in drought and heat-shock stress tolerance.


ensembl_gene_id: Q5W6Y0
symbol: Q5W6Y0_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:001-125-G09, full insert sequence; Belongs to the mitochondrial carrier (TC 2.A.29) family.


ensembl_gene_id: Q5W6Z9
symbol: EXPB18
gene_biotype: protein_coding
description:
  Expansin-B18; May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity); Belongs to the expansin family. Expansin B subfamily.


ensembl_gene_id: Q5W723
symbol: Q5W723_ORYSJ
gene_biotype: protein_coding
description:
  Golgi apparatus membrane protein TVP23; Golgi membrane protein involved in vesicular trafficking. Belongs to the TVP23 family.


ensembl_gene_id: Q5W726
symbol: GA2OX1
gene_biotype: protein_coding
description:
  Gibberellin 2-beta-dioxygenase 1; Catalyzes the 2-beta-hydroxylation of several biologically active gibberellins, leading to the homeostatic regulation of their endogenous level. Catabolism of gibberellins (GAs) plays a central role in plant development. Controls the level of bioactive GAs in the shoot apical meristem, which regulates the vegetative to reproductive phase transition. In vitro, converts GA1, GA4, GA9, GA20, and GA44 to the corresponding 2-beta-hydroxylated products GA8, GA34, GA51, GA29, and GA98, respectively; Belongs to the iron/ascorbate-dependent oxidoreductase famil [...]


ensembl_gene_id: Q5W727
symbol: SCP26
gene_biotype: protein_coding
description:
  Serine carboxypeptidase-like 26; Acts as positive regulator of grain size by controlling grain width, filling and weight. High expression of GS5 in the grain is correlated with large grain size.


ensembl_gene_id: Q5W736
symbol: CIPK18
gene_biotype: protein_coding
description:
  CBL-interacting protein kinase 18; CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity).


ensembl_gene_id: Q5W770
symbol: OJ1320_D10.4
gene_biotype: protein_coding
description:
  TATA box-binding protein-associated factor RNA polymerase I subunit B; Component of RNA polymerase I core factor complex that acts as a GTF2B/TFIIB-like factor and plays a key role in multiple steps during transcription initiation such as pre-initiation complex (PIC) assembly and postpolymerase recruitment events in polymerase I (Pol I) transcription. Binds rDNA promoters and plays a role in Pol I recruitment (By similarity).


ensembl_gene_id: Q5W7C1
symbol: STAR2
gene_biotype: protein_coding
description:
  UPF0014 membrane protein STAR2; Associates with STAR2 to form a functional transmembrane ABC transporter required for detoxification of aluminum (Al) in roots. Can specifically transport UDP-glucose; Belongs to the UPF0014 family.


ensembl_gene_id: Q5W7C3
symbol: WOX2
gene_biotype: protein_coding
description:
  Putative WUSCHEL-related homeobox 2; Transcription factor which may be involved in developmental processes; Belongs to the WUS homeobox family.


ensembl_gene_id: Q5W7C6
symbol: KIN5A
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-5A; Responsible for microtubule translocation. May be important for the organization of phragmoplast-specific arrays of microtubules (By similarity). Plays an essential role in stabilizing the mitotic spindle. Required during mitotic cytokinesis (By similarity). Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-5/BimC subfamily.


ensembl_gene_id: Q5WA72
symbol: PDIL1-5
gene_biotype: protein_coding
description:
  Protein disulfide isomerase-like 1-5; Acts as a protein-folding catalyst that interacts with nascent polypeptides to catalyze the formation, isomerization, and reduction or oxidation of disulfide bonds. May play a role in storage protein biogenesis (By similarity).


ensembl_gene_id: Q5WA76
symbol: PUB70
gene_biotype: protein_coding
description:
  U-box domain-containing protein 70; Functions as an E3 ubiquitin ligase. Is recruited by MODD to promote ubiquitination of BZIP46, a positive regulator of abscisic acid (ABA) signaling and drought stress tolerance. Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q5WMM8
symbol: Q5WMM8_ORYSJ
gene_biotype: protein_coding
description:
  Bacterial blight disease resistance related protein; Belongs to the disease resistance NB-LRR family.


ensembl_gene_id: Q5WMW5
symbol: XIP
gene_biotype: protein_coding
description:
  Xylanase inhibitor protein XIP; Fungal xylanase inhibitor. Possesses competitive inhibiting activity against several fungal endo- 1,4-beta-D-xylanases belonging to glycoside hydrolase family 10 (GH10) and family 11 (GH11). May function in plant defense against secreted fungal pathogen xylanases. Is similar to class III chitinases, but does not exhibit chitinase activity.


ensembl_gene_id: Q5Z402
symbol: B1206D04.26
gene_biotype: protein_coding
description:
  Clathrin light chain 2; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles.


ensembl_gene_id: Q5Z413
symbol: SPPL5
gene_biotype: protein_coding
description:
  Signal peptide peptidase-like 5; Intramembrane-cleaving aspartic protease (I-CLiP) that cleaves type II membrane signal peptides in the hydrophobic plane of the membrane; Belongs to the peptidase A22B family.


ensembl_gene_id: Q5Z4U5
symbol: GATA20
gene_biotype: protein_coding
description:
  GATA transcription factor 20; Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.


ensembl_gene_id: Q5Z5A8
symbol: HCF136
gene_biotype: protein_coding
description:
  Photosystem II stability/assembly factor HCF136, chloroplastic; Essential for photosystem II (PSII) biogenesis; required for assembly of an early intermediate in PSII assembly that includes D2 (psbD) and cytochrome b559; Belongs to the Ycf48 family.


ensembl_gene_id: Q5Z5B2
symbol: AGO1D
gene_biotype: protein_coding
description:
  Protein argonaute 1D; Probably involved in the RNA silencing pathway. May bind to short RNAs such as microRNAs (miRNAs) or short interfering RNAs (siRNAs), and represses the translation of mRNAs which are complementary to them (By similarity).


ensembl_gene_id: Q5Z5B7
symbol: PSY1
gene_biotype: protein_coding
description:
  Phytoene synthase 1, chloroplastic; Catalyzes the conversion of geranylgeranyl diphosphate to phytoene. Mediates the first committed step in carotenoid biosynthesis.


ensembl_gene_id: Q5Z5I4
symbol: GLK1
gene_biotype: protein_coding
description:
  Probable transcription factor GLK1; Probable transcriptional activator that promotes chloroplast development. Acts as an activator of nuclear photosynthetic genes involved in chlorophyll biosynthesis, light harvesting, and electron transport.


ensembl_gene_id: Q5Z5R4
symbol: CYP701A6
gene_biotype: protein_coding
description:
  Ent-kaurene oxidase 2; Catalyzes three successive oxidations of the 4-methyl group of ent-kaurene giving kaurenoic acid, a key step in gibberellins (GAs) biosynthesis. GAs, which are involved many processes, including stem elongation, play a central role in plant development.


ensembl_gene_id: Q5Z620
symbol: CKX10
gene_biotype: protein_coding
description:
  Cytokinin dehydrogenase 10; Catalyzes the oxidation of cytokinins, a family of N(6)- substituted adenine derivatives that are plant hormones, where the substituent is an isopentenyl group.


ensembl_gene_id: Q5Z627
symbol: P0610D01.10
gene_biotype: protein_coding
description:
  Elongation factor 1-gamma 3; Probably plays a role in anchoring the complex to other cellular components.


ensembl_gene_id: Q5Z653
symbol: ZIP10
gene_biotype: protein_coding
description:
  Zinc transporter 10; Zinc transporter that may be involved in zinc uptake from the rhizosphere; Belongs to the ZIP transporter (TC 2.A.5) family.


ensembl_gene_id: Q5Z678
symbol: ILL6
gene_biotype: protein_coding
description:
  IAA-amino acid hydrolase ILR1-like 6; Hydrolyzes certain amino acid conjugates of the plant growth regulator indole-3-acetic acid (IAA).


ensembl_gene_id: Q5Z6A4
symbol: HSFA6A
gene_biotype: protein_coding
description:
  Putative heat stress transcription factor A-6a; Transcriptional regulator that specifically binds DNA of heat shock promoter elements (HSE).


ensembl_gene_id: Q5Z6B1
symbol: P0410C01.17
gene_biotype: protein_coding
description:
  Probable tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant s [...]


ensembl_gene_id: Q5Z6E5
symbol: CSLD5
gene_biotype: protein_coding
description:
  Cellulose synthase-like protein D5; Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase-like D subfamily.


ensembl_gene_id: Q5Z6F0
symbol: TIP2-2
gene_biotype: protein_coding
description:
  Probable aquaporin TIP2-2; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes. May be involved in transport from the vacuolar compartment to the cytoplasm (By similarity).


ensembl_gene_id: Q5Z6K9
symbol: HAK24
gene_biotype: protein_coding
description:
  Potassium transporter 24; High-affinity potassium transporter; Belongs to the HAK/KUP transporter (TC 2.A.72.3) family.


ensembl_gene_id: Q5Z6X0
symbol: CIPK25
gene_biotype: protein_coding
description:
  CBL-interacting protein kinase 25; CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity).


ensembl_gene_id: Q5Z749
symbol: IAA21
gene_biotype: protein_coding
description:
  Auxin-responsive protein IAA21; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.


ensembl_gene_id: Q5Z754
symbol: CDKF-1
gene_biotype: protein_coding
description:
  Cyclin-dependent kinase F-1; Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily.


ensembl_gene_id: Q5Z7I1
symbol: Q5Z7I1_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J023133A01, full insert sequence; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.


ensembl_gene_id: Q5Z7J0
symbol: GSK4
gene_biotype: protein_coding
description:
  Shaggy-related protein kinase GSK4; Probable serine-threonine kinase that may regulate brassinosteroid signaling; Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. GSK-3 subfamily.


ensembl_gene_id: Q5Z807
symbol: LIC
gene_biotype: protein_coding
description:
  Zinc finger CCCH domain-containing protein 46; Transcriptional activator that binds double-stranded DNA and the single-stranded RNA polymers poly(rA), poly(rU) and poly(rG), but not poly(rC). Mediates optimal plant architecture through brassinosteroid (BR) signaling. May act as a negative regulator in sterol homeostasis. Acts as negative regulator of BR signaling. Binds to the specific DNA sequence 5'-CTCGC-3' of BZR1 promoter and negatively regulates BZR1. Acts as an antagonistic transcription factor of BZR1 to attenuate the BR signaling pathway and regulate leaf bending. Represses th [...]


ensembl_gene_id: Q5Z818
symbol: SPL12
gene_biotype: protein_coding
description:
  Squamosa promoter-binding-like protein 12; Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May be involved in panicle development.


ensembl_gene_id: Q5Z856
symbol: ADCS
gene_biotype: protein_coding
description:
  Probable aminodeoxychorismate synthase, chloroplastic; Bifunctional enzyme that catalyzes the biosynthesis of 4- amino-4-deoxychorismate (ADC) from chorismate and glutamine. In the first step, a glutamine amidotransferase generates ammonia that is channelled between the binding sites of glutamine and chorismate and used along with chorismate in the second step, catalyzed by aminodeoxychorismate synthase, to produce ADC. Required for the synthesis of 4-aminobenzoate (PABA), an important component in tetrahydrofolate biosynthesis. Does not possess ADC lyase activity (By similarity).


ensembl_gene_id: Q5Z880
symbol: HRD1
gene_biotype: protein_coding
description:
  ERAD-associated E3 ubiquitin-protein ligase HRD1; Probable component of the HRD1 ubiquitin ligase complex that mediates the rapid degradation of misfolded endoplasmic reticulum (ER) proteins, a process called ER-associated degradation (ERAD). Belongs to the HRD1 family.


ensembl_gene_id: Q5Z8K3
symbol: OsJ_22473
gene_biotype: protein_coding
description:
  Adagio-like protein 1; Component of an E3 ubiquitin ligase complex that plays a central role in blue light-dependent circadian cycles. Acts as a blue light photoreceptor, due to the presence of FMN, that mediates light- regulated protein degradation of critical clock components by targeting them to the proteasome complex (By similarity); Belongs to the ADAGIO family.


ensembl_gene_id: Q5Z8L1
symbol: RPA2C
gene_biotype: protein_coding
description:
  Replication protein A 32 kDa subunit C; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions (By similarity).


ensembl_gene_id: Q5Z8Q9
symbol: PARP2-A
gene_biotype: protein_coding
description:
  Poly [ADP-ribose] polymerase 2-A; Involved in the base excision repair (BER) pathway, by catalyzing the poly(ADP-ribosyl)ation of a limited number of acceptor proteins involved in chromatin architecture and in DNA metabolism. This modification follows DNA damages and appears as an obligatory step in a detection/signaling pathway leading to the reparation of DNA strand breaks (By similarity).


ensembl_gene_id: Q5Z8S0
symbol: PYL9
gene_biotype: protein_coding
description:
  Abscisic acid receptor PYL9; Involved in abscisic acid (ABA) signaling during seed germination and abiotic stress response. Acts as positive regulator of ABA-mediated inhibition of seed germination, and tolerance to drought and cold stresses. Inhibits the activity of the protein phosphatases PP2C06 and PP2C09 when activated by abscisic acid (ABA).


ensembl_gene_id: Q5Z8T3
symbol: P0456F09.5
gene_biotype: protein_coding
description:
  Probable inositol oxygenase; Involved in the biosynthesis of UDP-glucuronic acid (UDP- GlcA), providing nucleotide sugars for cell-wall polymers. May be also involved in plant ascorbate biosynthesis (By similarity).


ensembl_gene_id: Q5Z8T8
symbol: XYXT1
gene_biotype: protein_coding
description:
  Beta-1,2-xylosyltransferase XYXT1; Glycosyltransferase involved in the xylosylation of xylan, the major hemicellulose (non-cellulosic component) of primary and secondary walls of angiosperms. Possesses beta-1,2- xylosyltransferase activity, transferring xylose from UDP-xylose to the xylan backbone. Catalyzes the addition of 2-O-xylosyl side chains to the xylan backbone.


ensembl_gene_id: Q5Z8V5
symbol: Q5Z8V5_ORYSJ
gene_biotype: protein_coding
description:
  Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.


ensembl_gene_id: Q5Z8V7
symbol: P0018H04.4
gene_biotype: protein_coding
description:
  Probable histone acetyltransferase HAC-like 2; Acetyltransferase enzyme. Acetylates histones, giving a specific tag for transcriptional activation.


ensembl_gene_id: Q5Z8V9
symbol: HEMB
gene_biotype: protein_coding
description:
  Delta-aminolevulinic acid dehydratase, chloroplastic; Catalyzes an early step in the biosynthesis of tetrapyrroles. Binds two molecules of 5-aminolevulinate per subunit, each at a distinct site, and catalyzes their condensation to form porphobilinogen (By similarity); Belongs to the ALAD family.


ensembl_gene_id: Q5Z8Y4
symbol: USP
gene_biotype: protein_coding
description:
  UDP-sugar pyrophosphorylase; May function as the terminal enzyme of the myo-inositol oxidation (MIO) pathway. May also play a role in the salvage pathway for synthesis of nucleotide sugars (By similarity).


ensembl_gene_id: Q5Z8Z7
symbol: P0656E03.30
gene_biotype: protein_coding
description:
  Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform; The B regulatory subunit may modulate substrate selectivity and catalytic activity, and also may direct the localization of the catalytic enzyme to a particular subcellular compartment.


ensembl_gene_id: Q5Z922
symbol: P0528E12.13
gene_biotype: protein_coding
description:
  Solute carrier family 40 member 1; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.


ensembl_gene_id: Q5Z957
symbol: Q5Z957_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J033046H14, full insert sequence; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.


ensembl_gene_id: Q5Z974
symbol: FTSH1
gene_biotype: protein_coding
description:
  ATP-dependent zinc metalloprotease FTSH 1, chloroplastic; Probable ATP-dependent zinc metallopeptidase; In the C-terminal section; belongs to the peptidase M41 family.


ensembl_gene_id: Q5Z987
symbol: P0535F09.39
gene_biotype: protein_coding
description:
  Serine/threonine-protein kinase ATR; Probable serine/threonine kinase. Seems to play a central role in cell-cycle regulation by transmitting DNA damage signals to downstream effectors of cell-cycle progression. May recognize the substrate consensus sequence [ST]-Q and phosphorylate histone variant H2AX to form H2AXS139ph at sites of DNA damage, thereby regulating DNA damage response mechanism (By similarity); Belongs to the PI3/PI4-kinase family. ATM subfamily.


ensembl_gene_id: Q5Z9E2
symbol: NIP1-4
gene_biotype: protein_coding
description:
  Aquaporin NIP1-4; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes; Belongs to the MIP/aquaporin (TC 1.A.8) family. NIP (TC 1.A.8.12) subfamily.


ensembl_gene_id: Q5Z9I1
symbol: Q5Z9I1_ORYSJ
gene_biotype: protein_coding
description:
  Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.


ensembl_gene_id: Q5Z9I2
symbol: IMCEL1
gene_biotype: protein_coding
description:
  Probable isoprenylcysteine alpha-carbonyl methylesterase ICMEL1; Catalyzes the demethylation of isoprenylcysteine methylesters.


ensembl_gene_id: Q5Z9J0
symbol: MPK12
gene_biotype: protein_coding
description:
  Mitogen-activated protein kinase 12; May be involved in defense signaling pathway. Phosphorylates EREBP1 transcriptional activator in vitro. Enhances DNA-binding activity of EREBP1 to the GCC box element of pathogenesis-related (PR) gene promoters; Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MAP kinase subfamily.


ensembl_gene_id: Q5Z9N5
symbol: FON1
gene_biotype: protein_coding
description:
  Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1; Receptor-like kinase protein that regulates the size of the floral meristem.


ensembl_gene_id: Q5Z9Z3
symbol: OsJ_21152
gene_biotype: protein_coding
description:
  Thioredoxin-like protein Clot; Probable thiol-disulfide oxidoreductase that may participate in various redox reactions.


ensembl_gene_id: Q5ZA07
symbol: MKRN
gene_biotype: protein_coding
description:
  E3 ubiquitin-protein ligase makorin; E3 ubiquitin ligase catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins.


ensembl_gene_id: Q5ZA21
symbol: GA2OX2
gene_biotype: protein_coding
description:
  Gibberellin 2-beta-dioxygenase 2; Catalyzes the 2-beta-hydroxylation of several biologically active gibberellins, leading to the homeostatic regulation of their endogenous level. Catabolism of gibberellins (GAs) plays a central role in plant development.


ensembl_gene_id: Q5ZA47
symbol: Q5ZA47_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:001-017-G10, full insert sequence; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Q5ZAJ0
symbol: RBOHB
gene_biotype: protein_coding
description:
  Respiratory burst oxidase homolog protein B; Calcium-dependent NADPH oxidase that generates superoxide.


ensembl_gene_id: Q5ZAQ2
symbol: LIP1P-1
gene_biotype: protein_coding
description:
  Lipoyl synthase 1, chloroplastic; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: Q5ZAY0
symbol: TF1
gene_biotype: protein_coding
description:
  Homeobox-leucine zipper protein TF1; Probable transcription factor; Belongs to the HD-ZIP homeobox family. Class IV subfamily.


ensembl_gene_id: Q5ZAY9
symbol: CKX5
gene_biotype: protein_coding
description:
  Cytokinin dehydrogenase 5; Catalyzes the oxidation of cytokinins, a family of N(6)- substituted adenine derivatives that are plant hormones, where the substituent is an isopentenyl group; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.


ensembl_gene_id: Q5ZBD1
symbol: Q5ZBD1_ORYSJ
gene_biotype: protein_coding
description:
  Importin subunit alpha; Binds specifically and directly to substrates containing either a simple or bipartite NLS motif. Promotes docking of import substrates to the nuclear envelope; Belongs to the importin alpha family.


ensembl_gene_id: Q5ZBY9
symbol: PSBW
gene_biotype: protein_coding
description:
  Photosystem II reaction center W protein, chloroplastic; Stabilizes dimeric photosystem II (PSII). In its absence no dimeric PSII accumulates and there is a reduction of monomeric PSII (By similarity).


ensembl_gene_id: Q5ZC82
symbol: LOG
gene_biotype: protein_coding
description:
  Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; Cytokinin-activating enzyme working in the direct activation pathway. Controls the shoot meristem activity. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms. Reacts specifically with cytokinin nucleoside 5'- monophosphates, but not with di- or triphosphate.


ensembl_gene_id: Q5ZC83
symbol: OPR9
gene_biotype: protein_coding
description:
  Putative 12-oxophytodienoate reductase 9; Putative oxophytodienoate reductase that may be involved in the biosynthesis or metabolism of oxylipin signaling molecules. Belongs to the NADH:flavin oxidoreductase/NADH oxidase family.


ensembl_gene_id: Q5ZC87
symbol: HAK3
gene_biotype: protein_coding
description:
  Probable potassium transporter 3; High-affinity potassium transporter; Belongs to the HAK/KUP transporter (TC 2.A.72.3) family.


ensembl_gene_id: Q5ZC88
symbol: CUL1
gene_biotype: protein_coding
description:
  Cullin-1; Involved in ubiquitination and subsequent proteasomal degradation of target proteins; Belongs to the cullin family.


ensembl_gene_id: Q5ZCB1
symbol: Q5ZCB1_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J013042O18, full insert sequence; Belongs to the Bowman-Birk serine protease inhibitor family.


ensembl_gene_id: Q5ZCC5
symbol: P0011G08.41
gene_biotype: protein_coding
description:
  Probable glucuronosyltransferase Os01g0157700; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls; Belongs to the glycosyltransferase 43 family.


ensembl_gene_id: Q5ZCL8
symbol: OsJ_00257
gene_biotype: protein_coding
description:
  Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic; Required for the splicing of group IIB introns in chloroplasts.


ensembl_gene_id: Q5ZCW1
symbol: LAC1
gene_biotype: protein_coding
description:
  Putative laccase-1; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family.


ensembl_gene_id: Q5ZD08
symbol: COPT3
gene_biotype: protein_coding
description:
  Copper transporter 3; Involved in the transport of copper; Belongs to the copper transporter (Ctr) (TC 1.A.56) family. SLC31A subfamily.


ensembl_gene_id: Q5ZD75
symbol: Q5ZD75_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J033106J03, full insert sequence; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q5ZDK4
symbol: Q5ZDK4_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J033012O14, full insert sequence; Belongs to the universal ribosomal protein uL22 family.


ensembl_gene_id: Q5ZE00
symbol: LPR3
gene_biotype: protein_coding
description:
  Multicopper oxidase LPR1 homolog 3; Multicopper oxidase that may play a role in the maintenance of inorganic phosphate homeostasis.


ensembl_gene_id: Q5ZE07
symbol: LPR2
gene_biotype: protein_coding
description:
  Multicopper oxidase LPR1 homolog 2; Multicopper oxidase that may play a role in the maintenance of inorganic phosphate homeostasis.


ensembl_gene_id: Q5ZEF1
symbol: NRR
gene_biotype: protein_coding
description:
  Protein NEGATIVE REGULATOR OF RESISTANCE; Acts as negative regulator of disease resitance. Acts on basal resistance, age-related resistance and resistance mediated by the LRR receptor kinase XA21. Plants over-expressing NRR display enhanced susceptibility to the bacterial blight Xanthomonas oryzae pv. oryzae (Xoo). Binds to and represses NPR1/NH1-mediated transcriptional activation of LG2 in vitro.


ensembl_gene_id: Q5ZEG0
symbol: MHZ4
gene_biotype: protein_coding
description:
  Protein MAO HUZI 4, chloroplastic; Required for neoxanthin biosynthesis, an intermediary step in abscisic acid (ABA) biosynthesis. Involved in an ABA pathway that acts at or downstream of ethylene receptors and positively regulates root ethylene response. In coleoptiles the MHZ4-dependent ABA pathway acts at or upstream of EIN2 to negatively regulate coleoptile ethylene response.


ensembl_gene_id: Q5ZEJ0
symbol: PAS2B
gene_biotype: protein_coding
description:
  Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2B; Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates in the production of VLCFAs of different chain lengths that are involved in multiple biological processes  [...]


ensembl_gene_id: Q5ZEM9
symbol: Q5ZEM9_ORYSJ
gene_biotype: protein_coding
description:
  Protein-lysine N-methyltransferase Os01g0121100; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.


ensembl_gene_id: Q5ZEN1
symbol: Q5ZEN1_ORYSJ
gene_biotype: protein_coding
description:
  Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.


ensembl_gene_id: Q60D93
symbol: Q60D93_ORYSJ
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial; Component of the coenzyme Q biosynthetic pathway. May play a role in organizing a multi-subunit COQ enzyme complex required for coenzyme Q biosynthesis. Required for steady-state levels of other COQ polypeptides; Belongs to the COQ4 family.


ensembl_gene_id: Q60DG4
symbol: NEK4
gene_biotype: protein_coding
description:
  Serine/threonine-protein kinase Nek4; May be involved in plant development processes. Belongs to the protein kinase superfamily. NEK Ser/Thr protein kinase family. NIMA subfamily.


ensembl_gene_id: Q60DN5
symbol: PROT1
gene_biotype: protein_coding
description:
  Proline transporter 1; Proline transporter that mediates proline transport across the plasma membrane when expressed in a heterologous system (Xenopus oocytes).


ensembl_gene_id: Q60DP1
symbol: Q60DP1_ORYSJ
gene_biotype: protein_coding
description:
  Glutathione S-transferase, N-terminal domain containing protein, expressed; Belongs to the GST superfamily.


ensembl_gene_id: Q60DW3
symbol: OsJ_18575
gene_biotype: protein_coding
description:
  PHD finger protein ALFIN-LIKE 5; Histone-binding component that specifically recognizes H3 tails trimethylated on 'Lys-4' (H3K4me3), which mark transcription start sites of virtually all active genes.


ensembl_gene_id: Q60DX1
symbol: TPK3
gene_biotype: protein_coding
description:
  Thiamine pyrophosphokinase 3; Catalyzes the phosphorylation of thiamine to thiamine pyrophosphate (TPP). TPP is an active cofactor for enzymes involved in glycolysis and energy production. Plant leaves require high levels of TPP for photosynthesis and carbohydrate metabolism (By similarity).


ensembl_gene_id: Q60E54
symbol: LSM5
gene_biotype: protein_coding
description:
  U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.


ensembl_gene_id: Q60E61
symbol: OsJ_18401
gene_biotype: protein_coding
description:
  Protein N-terminal glutamine amidohydrolase; Mediates the side-chain deamidation of N-terminal glutamine residues to glutamate, an important step in N-end rule pathway of protein degradation. Conversion of the resulting N-terminal glutamine to glutamate renders the protein susceptible to arginylation, polyubiquitination and degradation as specified by the N-end rule. Does not act on substrates with internal or C-terminal glutamine and does not act on non-glutamine residues in any position.


ensembl_gene_id: Q60E70
symbol: BC1L4
gene_biotype: protein_coding
description:
  COBRA-like protein 3; Involved in determining the orientation of cell expansion, probably by playing an important role in cellulose deposition. May act by recruiting cellulose synthesizing complexes to discrete positions on the cell surface (By similarity); Belongs to the COBRA family.


ensembl_gene_id: Q60EA5
symbol: SCAMP3
gene_biotype: protein_coding
description:
  Secretory carrier-associated membrane protein 3; Probably involved in membrane trafficking; Belongs to the SCAMP family.


ensembl_gene_id: Q60EC2
symbol: SWEET1B
gene_biotype: protein_coding
description:
  Bidirectional sugar transporter SWEET1b; Mediates both low-affinity uptake and efflux of sugar across the plasma membrane.


ensembl_gene_id: Q60EF6
symbol: Q60EF6_ORYSJ
gene_biotype: protein_coding
description:
  Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.


ensembl_gene_id: Q60EH4
symbol: COI1B
gene_biotype: protein_coding
description:
  Coronatine-insensitive protein homolog 1b; Involved in jasmonate (JA) signaling. Required for jasmonate signaling in plant defense responses. Can complement Arabidopsis coi1-1 mutant and restore jasmonate signaling. Component of SCF(COI1) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins, including TIFY/JAZ family (By similarity).


ensembl_gene_id: Q60EJ6
symbol: GH3.4
gene_biotype: protein_coding
description:
  Probable indole-3-acetic acid-amido synthetase GH3.4; May catalyze the synthesis of indole-3-acetic acid (IAA)- amino acid conjugates, providing a mechanism for the plant to cope with the presence of excess auxin.


ensembl_gene_id: Q60EN8
symbol: COPT2
gene_biotype: protein_coding
description:
  Copper transporter 2; Involved in the transport of copper, in cooperation with SWEET11 and COPT1. Contributes to the removal of copper (Cu) from xylem, and thus to the sensitivity toward bacterial pathogens such as X.oryzae pv. oryzae (Xoo); Belongs to the copper transporter (Ctr) (TC 1.A.56) family. SLC31A subfamily.


ensembl_gene_id: Q60EQ4
symbol: NFYB3
gene_biotype: protein_coding
description:
  Nuclear transcription factor Y subunit B-3; Component of the NF-Y/HAP transcription factor complex. The NF-Y complex stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters. May regulate the expression of photosynthetic genes, and may be involved in chloroplast and amyloplast development; Belongs to the NFYB/HAP3 subunit family.


ensembl_gene_id: Q60ER7
symbol: Q60ER7_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:001-019-F07, full insert sequence; Belongs to the mitochondrial carrier (TC 2.A.29) family.


ensembl_gene_id: Q60EW9
symbol: FTIP7
gene_biotype: protein_coding
description:
  FT-interacting protein 7; Promotes nuclear translocation of the transcription factor OSH1, which directly suppresses the auxin biosynthetic gene YUCCA4 during the late development of anthers. Reduction of auxin levels at late stage of anther development, after meiosis of microspore mother cells, is necessary for normal anther dehiscence and seed setting. Required for jasmonate (JA) biosynthetic genes expression and JA production in anthers ; Belongs to the MCTP family.


ensembl_gene_id: Q60EY1
symbol: GH3.6
gene_biotype: protein_coding
description:
  Probable indole-3-acetic acid-amido synthetase GH3.6; May catalyze the synthesis of indole-3-acetic acid (IAA)- amino acid conjugates, providing a mechanism for the plant to cope with the presence of excess auxin.


ensembl_gene_id: Q60EY8
symbol: CIPK20
gene_biotype: protein_coding
description:
  CBL-interacting protein kinase 20; CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity); Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.


ensembl_gene_id: Q60EY9
symbol: Q60EY9_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:001-030-F09, full insert sequence; Belongs to the mitochondrial carrier (TC 2.A.29) family.


ensembl_gene_id: Q60EZ2
symbol: GSK2
gene_biotype: protein_coding
description:
  Shaggy-related protein kinase GSK2; Serine-threonine kinase that acts as a negative regulator of brassinosteroid (BR) signaling. Phosphorylates DLT and BZR1, two positive regulators that mediates several BR responses. Phosphorylation of DLT and BZR1 inhibits their activities in BR signaling. Phosphorylates OFP8, a positive regulator of BR responses. Phosphorylated OFP8 shuttles from the nucleus to the cytoplasm where it is degraded by the proteasome. Phosphorylates the E3 ubiquitin-protein ligase PUB24, a negative regulator of BR signaling, which targets BZR1 and promotes its degradati [...]


ensembl_gene_id: Q60GC1
symbol: EXO1
gene_biotype: protein_coding
description:
  Exonuclease 1; Putative 5'->3' double-stranded DNA exonuclease which may also contain a cryptic 3'->5' double-stranded DNA exonuclease activity. May be involved in DNA mismatch repair (MMR) (By similarity).


ensembl_gene_id: Q64MA1
symbol: DREB1A
gene_biotype: protein_coding
description:
  Dehydration-responsive element-binding protein 1A; Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription. Confers resistance to high salt, cold and drought stress.


ensembl_gene_id: Q64MA3
symbol: RAD
gene_biotype: protein_coding
description:
  Flap endonuclease GEN-like 1; Endonuclease which cleaves flap structures at the junction between single-stranded DNA and double-stranded DNA. Possesses both single-stranded and double-stranded DNA-binding activities. Involved in early microspore development, but does not alter meiosis or tapetal cells development. Possesses Holliday junction (HJ) resolvase activity in vitro. Cleaves HJ at symmetrically related sites of the branch point. Belongs to the XPG/RAD2 endonuclease family. GEN subfamily.


ensembl_gene_id: Q64MA8
symbol: Q64MA8_ORYSJ
gene_biotype: protein_coding
description:
  ATPase; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. Subseq [...]


ensembl_gene_id: Q650U0
symbol: BASS5
gene_biotype: protein_coding
description:
  Probable sodium/metabolite cotransporter BASS5, chloroplastic; May function as sodium-coupled metabolite transporter across the chloroplast envelope; Belongs to the bile acid:sodium symporter (BASS) (TC 2.A.28) family.


ensembl_gene_id: Q650Z3
symbol: Q650Z3_ORYSJ
gene_biotype: protein_coding
description:
  Os09g0572900 protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.


ensembl_gene_id: Q651A1
symbol: B1331F11.20
gene_biotype: protein_coding
description:
  P-loop NTPase domain-containing protein LPA1 homolog; Required for the accumulation of phytic acid in seeds. Phytic acid is the primary storage form of phosphorus in cereal grains and other plant seeds.


ensembl_gene_id: Q651D5
symbol: PIP2-7
gene_biotype: protein_coding
description:
  Probable aquaporin PIP2-7; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.


ensembl_gene_id: Q651E1
symbol: MED4
gene_biotype: protein_coding
description:
  Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.


ensembl_gene_id: Q651E8
symbol: SKP20
gene_biotype: protein_coding
description:
  SKP1-like protein 20; Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, a RING-box and a F- box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends on the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1; Belongs to the SKP1 family.


ensembl_gene_id: Q651J5
symbol: PHO1-3
gene_biotype: protein_coding
description:
  Phosphate transporter PHO1-3; May transport inorganic phosphate (Pi); Belongs to the SYG1 (TC 2.A.94) family.


ensembl_gene_id: Q651U1
symbol: CRYD
gene_biotype: protein_coding
description:
  Cryptochrome DASH, chloroplastic/mitochondrial; May have a photoreceptor function. Binds ss- and ds-DNA in a sequence non-specific manner, lacks photolyase activity (By similarity); Belongs to the DNA photolyase class-1 family.


ensembl_gene_id: Q651V6
symbol: PIN2
gene_biotype: protein_coding
description:
  Auxin efflux carrier component 2; Acts as a component of the auxin efflux carrier. Involved in the basipetal polar auxin transport which contributes to the spreading growth of the tillers.


ensembl_gene_id: Q651X6
symbol: CSLE6
gene_biotype: protein_coding
description:
  Cellulose synthase-like protein E6; Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase-like E subfamily.


ensembl_gene_id: Q651X7
symbol: CSLE1
gene_biotype: protein_coding
description:
  Cellulose synthase-like protein E1; Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.


ensembl_gene_id: Q651X9
symbol: Q651X9_ORYSJ
gene_biotype: protein_coding
description:
  Os09g0477900 protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: Q651Z5
symbol: HOX6
gene_biotype: protein_coding
description:
  Homeobox-leucine zipper protein HOX6; Probable transcription factor that binds to the DNA sequence 5'-CAAT[AT]ATTG-3'.


ensembl_gene_id: Q651Z7
symbol: KIN7J
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-7J; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-7 subfamily.


ensembl_gene_id: Q652A1
symbol: IAA26
gene_biotype: protein_coding
description:
  Auxin-responsive protein IAA26; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.


ensembl_gene_id: Q652A8
symbol: UGE-3
gene_biotype: protein_coding
description:
  UDP-glucose 4-epimerase 3; Catalyzes the interconversion between UDP-glucose and UDP- galactose; Belongs to the NAD(P)-dependent epimerase/dehydratase family.


ensembl_gene_id: Q652B0
symbol: HSFB2C
gene_biotype: protein_coding
description:
  Heat stress transcription factor B-2c; Transcriptional regulator that specifically binds DNA of heat shock promoter elements (HSE); Belongs to the HSF family. Class B subfamily.


ensembl_gene_id: Q652I1
symbol: G1L2
gene_biotype: protein_coding
description:
  Protein G1-like2; Probable transcription regulator that acts as a developmental regulator by promoting cell growth in response to light; Belongs to the plant homeotic and developmental regulators ALOG protein family.


ensembl_gene_id: Q652J4
symbol: HAK13
gene_biotype: protein_coding
description:
  Probable potassium transporter 13; High-affinity potassium transporter; Belongs to the HAK/KUP transporter (TC 2.A.72.3) family.


ensembl_gene_id: Q652K1
symbol: SGR
gene_biotype: protein_coding
description:
  Protein STAY-GREEN, chloroplastic; Involved in the disassembling mechanism of the intact light- harvesting complex of photosystem II (LHCII) in the thylakoid membranes. Required to trigger chlorophyll degradation during natural and dark-induced leaf senescence.


ensembl_gene_id: Q652L2
symbol: OJ1003_C09.2
gene_biotype: protein_coding
description:
  Protein HIRA; Histone chaperone involved in maintining knox genes silencing throughout leaf development; Belongs to the WD repeat HIR1 family.


ensembl_gene_id: Q652L6
symbol: MDAR3
gene_biotype: protein_coding
description:
  Monodehydroascorbate reductase 3, cytosolic; Catalyzes the conversion of monodehydroascorbate to ascorbate, oxidizing NADH in the process. Ascorbate is a major antioxidant against reactive oxygen species (ROS) and nitric oxide (NO). Can use NADPH as electron donor, but possesses lower activity compared to NADH as electron donor.


ensembl_gene_id: Q652N5
symbol: PHT4;4
gene_biotype: protein_coding
description:
  Probable anion transporter 4, chloroplastic; Probable anion transporter; Belongs to the major facilitator superfamily. Sodium/anion cotransporter (TC 2.A.1.14) family.


ensembl_gene_id: Q652P4
symbol: OJ1003_C09.22
gene_biotype: protein_coding
description:
  Cleavage and polyadenylation specificity factor subunit 2; CPSF plays a key role in pre-mRNA 3'-end formation, recognizing the AAUAAA signal sequence and interacting with poly(A)polymerase and other factors to bring about cleavage and poly(A) addition.


ensembl_gene_id: Q652P9
symbol: OJ1003_C09.14
gene_biotype: protein_coding
description:
  Germin-like protein 9-3; May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.


ensembl_gene_id: Q652Q0
symbol: OJ1003_C09.12
gene_biotype: protein_coding
description:
  Putative germin-like protein 9-2; May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.


ensembl_gene_id: Q652Q1
symbol: OJ1003_C09.11
gene_biotype: protein_coding
description:
  Germin-like protein 9-1; May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.


ensembl_gene_id: Q652U9
symbol: P0046H10.36
gene_biotype: protein_coding
description:
  Potassium channel KAT4; Probable inward-rectifying potassium channel. Assuming opened or closed conformations in response to the voltage difference across the membrane, the channel is activated by hyperpolarization (By similarity); Belongs to the potassium channel family. Plant (TC 1.A.1.4) subfamily.


ensembl_gene_id: Q653B6
symbol: HAK18
gene_biotype: protein_coding
description:
  Potassium transporter 18; High-affinity potassium transporter; Belongs to the HAK/KUP transporter (TC 2.A.72.3) family.


ensembl_gene_id: Q653F4
symbol: IRX14
gene_biotype: protein_coding
description:
  Probable beta-1,4-xylosyltransferase IRX14; Probable beta-1,4-xylosyltransferase involved in xylan biosynthesis in cell walls; Belongs to the glycosyltransferase 43 family.


ensembl_gene_id: Q653F5
symbol: Q653F5_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J023133F22, full insert sequence; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.


ensembl_gene_id: Q653H7
symbol: ARF18
gene_biotype: protein_coding
description:
  Auxin response factor 18; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).


ensembl_gene_id: Q653N3
symbol: MAP70.3
gene_biotype: protein_coding
description:
  Microtubule-associated protein 70-3; Plant-specific protein that interact with microtubules. Belongs to the MAP70 family.


ensembl_gene_id: Q653P0
symbol: P0431E05.11
gene_biotype: protein_coding
description:
  Potassium channel KOR1; Probable outward-rectifying potassium channel; Belongs to the potassium channel family. Plant (TC 1.A.1.4) subfamily.


ensembl_gene_id: Q653S9
symbol: Q653S9_ORYSJ
gene_biotype: protein_coding
description:
  NADPH--cytochrome P450 reductase; This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5; In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.


ensembl_gene_id: Q653T6
symbol: SPS1-2
gene_biotype: protein_coding
description:
  Solanesyl-diphosphate synthase 1, mitochondrial; Involved in the supply of solanesyl diphosphate for ubiquinone-9 (UQ-9) biosynthesis in mitochondria. Farnesyl diphosphate is the preferred substrate.


ensembl_gene_id: Q653U3
symbol: ARF17
gene_biotype: protein_coding
description:
  Auxin response factor 17; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).


ensembl_gene_id: Q653V9
symbol: Q653V9_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:006-303-A09, full insert sequence; Belongs to the universal ribosomal protein uL24 family.


ensembl_gene_id: Q653Z5
symbol: SPL11-2
gene_biotype: protein_coding
description:
  Squamosa promoter-binding-like protein 11; Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May be involved in panicle development.


ensembl_gene_id: Q654B3
symbol: RISBZ5
gene_biotype: protein_coding
description:
  bZIP transcription factor RISBZ5; Probable transcription factor that binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters. May function as a negative regulator in cold and drought stress responses.


ensembl_gene_id: Q654D9
symbol: CSTLP1
gene_biotype: protein_coding
description:
  CMP-sialic acid transporter 1; Sugar transporter involved in the transport of CMP-sialic acid from the cytoplasm into the Golgi. May transport important nucleotide sugars such as CMP-Kdo (2-keto-3-deoxy-D-manno-octulosonic acid) in physiological conditions.


ensembl_gene_id: Q654M1
symbol: GH3.7
gene_biotype: protein_coding
description:
  Probable indole-3-acetic acid-amido synthetase GH3.7; May catalyze the synthesis of indole-3-acetic acid (IAA)- amino acid conjugates, providing a mechanism for the plant to cope with the presence of excess auxin.


ensembl_gene_id: Q654U5
symbol: Q654U5_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J033086P03, full insert sequence; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.


ensembl_gene_id: Q654U8
symbol: PFP-BETA
gene_biotype: protein_coding
description:
  Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; Catalytic subunit of pyrophosphate--fructose 6-phosphate 1- phosphotransferase. Catalyzes the phosphorylation of D-fructose 6- phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP- dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis.


ensembl_gene_id: Q654V6
symbol: OJ1136_C11.8
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3) (By similarity).


ensembl_gene_id: Q654Y6
symbol: Q654Y6_ORYSJ
gene_biotype: protein_coding
description:
  DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.


ensembl_gene_id: Q655R6
symbol: MCSU3
gene_biotype: protein_coding
description:
  Molybdenum cofactor sulfurase; Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form.


ensembl_gene_id: Q655S1
symbol: FTSH2
gene_biotype: protein_coding
description:
  ATP-dependent zinc metalloprotease FTSH 2, chloroplastic; Probable ATP-dependent zinc metallopeptidase; In the N-terminal section; belongs to the AAA ATPase family.


ensembl_gene_id: Q655V5
symbol: NFYC4
gene_biotype: protein_coding
description:
  Nuclear transcription factor Y subunit C-4; Probable transcription factor involved in the regulation of flowering time under long day (LD) conditions. Functions as repressor of flowering, independently of HD1 and GHD7. Controls flowering time by negatively regulating the expression of EHD1 and HD3A. Component of the NF-Y/HAP transcription factor complex (By similarity); Belongs to the NFYC/HAP5 subunit family.


ensembl_gene_id: Q655W2
symbol: Q655W2_ORYSJ
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: Q655X0
symbol: OsJ_22283
gene_biotype: protein_coding
description:
  Thioredoxin O, mitochondrial; Probable thiol-disulfide oxidoreductase that may participate in various redox reactions; Belongs to the thioredoxin family. Plant O-type subfamily.


ensembl_gene_id: Q655X8
symbol: AAH
gene_biotype: protein_coding
description:
  Probable allantoate deiminase; Involved in the catabolism of purine nucleotides. The sequential activity of AAH, UGLYAH and UAH allows a complete purine breakdown without the intermediate generation of urea. Belongs to the peptidase M20A family.


ensembl_gene_id: Q655Y0
symbol: APO1
gene_biotype: protein_coding
description:
  Protein ABERRANT PANICLE ORGANIZATION 1; Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Together with FL/APO2, involved in the temporal regulation of meristem identity during both vegetative and reproductive developments in an APO2- dependent manner (Ref.5, Ref.6,. Promotes spikelet formation by suppressing the precocious conversion of inflorescence meristems to spikelet meristems, probably via a positive regulation of class-C floral homeotic genes, but not [...]


ensembl_gene_id: Q656A5
symbol: MFT1
gene_biotype: protein_coding
description:
  Protein MOTHER of FT and TFL1 homolog 1; May form complexes with phosphorylated ligands by interfering with kinases and their effectors.


ensembl_gene_id: Q656N1
symbol: Q656N1_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J023039E01, full insert sequence; Belongs to the iron/ascorbate-dependent oxidoreductase family.


ensembl_gene_id: Q657C0
symbol: HSFA6B
gene_biotype: protein_coding
description:
  Heat stress transcription factor A-6a; Transcriptional regulator that specifically binds DNA of heat shock promoter elements (HSE).


ensembl_gene_id: Q657G7
symbol: P0426D06.47
gene_biotype: protein_coding
description:
  CRS2-associated factor 2, chloroplastic; Required for the splicing of group IIB introns in chloroplasts. Forms splicing particles with CRS2. Interacts with RNA and confers intron specificity of the splicing particles (By similarity).


ensembl_gene_id: Q657W3
symbol: CCC2
gene_biotype: protein_coding
description:
  Cation-chloride cotransporter 2; Probable cation/chloride cotransporter; Belongs to the SLC12A transporter family.


ensembl_gene_id: Q657X6
symbol: EX2
gene_biotype: protein_coding
description:
  Protein EXECUTER 2, chloroplastic; Together with EX1, enables higher plants to perceive singlet oxygen as a stress signal in plastid that activates a genetically determined nuclear stress response program which triggers a programmed cell death (PCD). This transfer of singlet oxygen-induced stress- related signals from the plastid to the nucleus that triggers genetically controlled PCD pathway is unique to photosynthetic eukaryotes and operates under mild stress conditions, impeding photosystem II (PSII) without causing photooxidative damage of the plant.


ensembl_gene_id: Q658G7
symbol: SIK1
gene_biotype: protein_coding
description:
  LRR receptor-like serine/threonine-protein kinase SIK1; Receptor kinase involved in salt drought stress responses. Acts as positive regulator of salt and drought tolerance. May promote salt and drought tolerance through the induction of the activities of antioxidative enzymes, such as peroxidase, superoxide dismutase and catalase. May be involved in the control of stomatal development in leaf epidermis. Possesses kinase activity in vitro. Does not seem to be involved in heat tolerance.


ensembl_gene_id: Q65WV6
symbol: Q65WV6_ORYSJ
gene_biotype: protein_coding
description:
  Os05g0475400 protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: Q65WX1
symbol: DREB2D
gene_biotype: protein_coding
description:
  Dehydration-responsive element-binding protein 2D; Probable transcriptional activator that binds to the DNA sequence 5'-[AG]CCGAC-3' of the cis-acting dehydration-responsive element (DRE); Belongs to the AP2/ERF transcription factor family. ERF subfamily.


ensembl_gene_id: Q65WY8
symbol: SSRP1-B
gene_biotype: protein_coding
description:
  FACT complex subunit SSRP1-B; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment [...]


ensembl_gene_id: Q65X70
symbol: OJ1579_G03.13
gene_biotype: protein_coding
description:
  Probable glycerol-3-phosphate dehydrogenase [NAD(+)] 3, cytosolic; May be involved in cell redox homeostasis.


ensembl_gene_id: Q65X71
symbol: ACA6
gene_biotype: protein_coding
description:
  Probable calcium-transporting ATPase 6, plasma membrane-type; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles.


ensembl_gene_id: Q65XA0
symbol: DHAR1
gene_biotype: protein_coding
description:
  Probable glutathione S-transferase DHAR1, cytosolic; Involved in ascorbate homeostasis. Maintains redox pools of ascorbate by recycling dihydroascorbate (DHA) to ascorbate (Probable). Involved in scavenging reactive oxygen species (ROS) under oxidative stresses. Possesses dehydroascorbate reductase (DHAR) activity in vitro. May function via a ping-pong reaction mechanism with an electron transfer at the active site. Possesses chaperone-like activity in vitro.


ensembl_gene_id: Q65XC7
symbol: Q65XC7_ORYSJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: Q65XE5
symbol: Q65XE5_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:006-206-B08, full insert sequence; Belongs to the iron/ascorbate-dependent oxidoreductase family.


ensembl_gene_id: Q65XF2
symbol: OSA15
gene_biotype: protein_coding
description:
  Senescence-associated protein OSA15, chloroplastic; May be involved in the regulation of leaf senescence. Belongs to the ATA15/OSA15 family.


ensembl_gene_id: Q65XK1
symbol: NFYB4
gene_biotype: protein_coding
description:
  Nuclear transcription factor Y subunit B-4; Component of the NF-Y/HAP transcription factor complex. The NF-Y complex stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters. May regulate the expression of photosynthetic genes, and may be involved in chloroplast and amyloplast development; Belongs to the NFYB/HAP3 subunit family.


ensembl_gene_id: Q65XK7
symbol: PP2C51
gene_biotype: protein_coding
description:
  Protein phosphatase 2C 51; Protein phosphatase that acts as positive regulator of seed germination. Involved in the positive regulation of alpha-amylase gene expression. Acts as negative regulator of abscisic acid-mediated responses. May function directly by dephosphorylating ABI5 and suppressing its activity; Belongs to the PP2C family.


ensembl_gene_id: Q65XL5
symbol: OJ1735_C10.3
gene_biotype: protein_coding
description:
  Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic; RNA-binding protein involved in group II intron splicing. Binds specific group II introns and promotes their splicing. Functions in the context of a heterodimer with the ribonuclease III domain- containing protein RNC1.


ensembl_gene_id: Q65XN2
symbol: Q65XN2_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J013002A10, full insert sequence; Belongs to the adaptor complexes medium subunit family.


ensembl_gene_id: Q65XR7
symbol: Q65XR7_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J033130A21, full insert sequence; Belongs to the mitochondrial carrier (TC 2.A.29) family.


ensembl_gene_id: Q65XS5
symbol: BC10
gene_biotype: protein_coding
description:
  Glycosyltransferase BC10; Glycosyltransferase required for the regulation of cellulose biosynthesis in the cell wall. Required for the biosynthesis of hexoses (glucose, mannose and galactose) in both cellulosic and non-cellulosic (pectins and hemicelluloses) components of cell walls. Required for the formation of arabinogalactan proteins which contribute to the strengthening of cell walls. Possesses low glycosyltransferase activity.


ensembl_gene_id: Q65XV2
symbol: XB3
gene_biotype: protein_coding
description:
  E3 ubiquitin-protein ligase XB3; E3 ubiquitin-protein ligase required for full accumulation of the LRR receptor kinase XA21 and XA21-mediated disease resistance. Binding to XA21 may stabilize the receptor kinase and maintain its protein level. Autoubiquitinated in vitro.


ensembl_gene_id: Q65XV7
symbol: RPA1C
gene_biotype: protein_coding
description:
  Replication protein A 70 kDa DNA-binding subunit C; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses (By similarity).


ensembl_gene_id: Q65XV8
symbol: RLCK176
gene_biotype: protein_coding
description:
  Receptor-like cytoplasmic kinase 176; Functions downstream of CERK1 in the microbial peptidoglycans (PGNs) and fungal chitin signaling pathways that mediate innate immunity. Participates to the activation of defense genes during response to PGN and chitin; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q66RK3
symbol: Q66RK3_ORYSJ
gene_biotype: protein_coding
description:
  Putative leucine-rich repeat receptor-like kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q67C40
symbol: MPK7
gene_biotype: protein_coding
description:
  Mitogen-activated protein kinase 7; Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MAP kinase subfamily.


ensembl_gene_id: Q67IT2
symbol: Q67IT2_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J013047P09, full insert sequence; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q67IT5
symbol: Q67IT5_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J023084M06, full insert sequence; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q67IU5
symbol: Q67IU5_ORYSJ
gene_biotype: protein_coding
description:
  Ribulose bisphosphate carboxylase small chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO small chain family.


ensembl_gene_id: Q67IX6
symbol: PDIL1-4
gene_biotype: protein_coding
description:
  Protein disulfide isomerase-like 1-4; Acts as a protein-folding catalyst that interacts with nascent polypeptides to catalyze the formation, isomerization, and reduction or oxidation of disulfide bonds. May play a role in storage protein biogenesis (By similarity).


ensembl_gene_id: Q67TP9
symbol: HSFB1
gene_biotype: protein_coding
description:
  Heat stress transcription factor B-1; Transcriptional regulator that specifically binds DNA of heat shock promoter elements (HSE).


ensembl_gene_id: Q67TV0
symbol: Q67TV0_ORYSJ
gene_biotype: protein_coding
description:
  GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins which plays important roles in the quality control and ER-associated degradation of GPI-anchored proteins.


ensembl_gene_id: Q67U26
symbol: VLN3
gene_biotype: protein_coding
description:
  Villin-3; Ca(2+)-regulated actin-binding protein. Binds actin microfilaments (MFs). Involved in actin filament bundling, severing and capping. Caps the barbed end of actin filaments and is able to sever them in a calcium-dependent manner. MF severing is promoted by VLN1.


ensembl_gene_id: Q67U69
symbol: OsJ_21395
gene_biotype: protein_coding
description:
  Formate dehydrogenase 2, mitochondrial; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Involved in the cell stress response; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily.


ensembl_gene_id: Q67U94
symbol: HSFB4C
gene_biotype: protein_coding
description:
  Heat stress transcription factor B-4c; Transcriptional regulator that specifically binds DNA of heat shock promoter elements (HSE).


ensembl_gene_id: Q67UE8
symbol: LYP4
gene_biotype: protein_coding
description:
  LysM domain-containing GPI-anchored protein LYP4; Functions in innate immunity. Functions as pattern recognition receptor (PRR), sensing bacterial peptidoglycan (PGN) and fungal chitin at the cell surface. Involved in resistance against the bacterial pathogen Xanthomonas oryzae pv. oryzae (Xoo) and the fungal pathogen Magnaporthe oryzae. Binds PGN and fungal chitin in vitro. Involved in microbe-associated molecular patterns (MAMPs) perception and participates to the activation of defense genes against the bacterial pathogen Xanthomonas oryzae pv. oryzicola (Xoc) or the fungal pathogen  [...]


ensembl_gene_id: Q67UF5
symbol: PDIL2-3
gene_biotype: protein_coding
description:
  Protein disulfide isomerase-like 2-3; Acts as a protein-folding catalyst that interacts with nascent polypeptides to catalyze the formation, isomerization, and reduction or oxidation of disulfide bonds. May play a role in storage protein biogenesis.


ensembl_gene_id: Q67UG1
symbol: Q67UG1_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:001-047-C08, full insert sequence; Belongs to the iron/ascorbate-dependent oxidoreductase family.


ensembl_gene_id: Q67UI2
symbol: MUB2
gene_biotype: protein_coding
description:
  Membrane-anchored ubiquitin-fold protein 2; May serve as docking site to facilitate the association of other proteins to the plasma membrane.


ensembl_gene_id: Q67UK9
symbol: DHAR2
gene_biotype: protein_coding
description:
  Probable glutathione S-transferase DHAR2, chloroplastic; Involved in ascorbate homeostasis. Maintains redox pools of ascorbate by recycling dihydroascorbate (DHA) to ascorbate. Involved in scavenging reactive oxygen species (ROS) under oxidative stresses. Belongs to the GST superfamily. DHAR family.


ensembl_gene_id: Q67UP6
symbol: Q67UP6_ORYSJ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.


ensembl_gene_id: Q67UQ7
symbol: MRS2-B
gene_biotype: protein_coding
description:
  Magnesium transporter MRS2-B; Magnesium transporter that may mediate the influx of magnesium; Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35.5) family.


ensembl_gene_id: Q67UT1
symbol: MED20
gene_biotype: protein_coding
description:
  Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.


ensembl_gene_id: Q67UU0
symbol: RSH3
gene_biotype: protein_coding
description:
  Probable GTP diphosphokinase RSH3, chloroplastic; Probable ppGpp (guanosine 3'-diphosphate 5'-diphosphate) synthetase that may be involved in a rapid plant ppGpp-mediated response to pathogens and other stresses; Belongs to the RelA/SpoT family.


ensembl_gene_id: Q67UX0
symbol: ADO2_ORYSJ
gene_biotype: protein_coding
description:
  Putative adagio-like protein 2; Component of an E3 ubiquitin ligase complex that plays a central role in blue light-dependent circadian cycles. Acts as a blue light photoreceptor, due to the presence of FMN, that mediates light- regulated protein degradation of critical clock components by targeting them to the proteasome complex (By similarity); Belongs to the ADAGIO family.


ensembl_gene_id: Q67UX6
symbol: HOX26
gene_biotype: protein_coding
description:
  Putative homeobox-leucine zipper protein HOX26; Probable transcription factor; Belongs to the HD-ZIP homeobox family. Class II subfamily.


ensembl_gene_id: Q67V61
symbol: PTC1
gene_biotype: protein_coding
description:
  PHD finger protein PERSISTENT TAPETAL CELL 1; Probable transcriptional activator required for tapetal programmed cell death (PCD) and degeneration, and pollen development in anthers.


ensembl_gene_id: Q67V78
symbol: OsJ_20740
gene_biotype: protein_coding
description:
  tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.


ensembl_gene_id: Q67VC8
symbol: POLL
gene_biotype: protein_coding
description:
  DNA polymerase lambda; Repair polymerase involved in base excision repair (BER) and responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Has both DNA polymerase and terminal transferase activities. Has a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.


ensembl_gene_id: Q67VP4
symbol: RAC4
gene_biotype: protein_coding
description:
  Rac-like GTP-binding protein 4; Inactive GDP-bound Rho GTPases reside in the cytosol, are found in a complex with Rho GDP-dissociation inhibitors (Rho GDIs), and are released from the GDI protein in order to translocate to membranes upon activation.


ensembl_gene_id: Q67VR7
symbol: ANS2
gene_biotype: protein_coding
description:
  Leucoanthocyanidin dioxygenase 2; Involved in anthocyanin and protoanthocyanidin biosynthesis by catalyzing the oxidation of leucoanthocyanidins into anthocyanidins.


ensembl_gene_id: Q67VS7
symbol: CSLA9
gene_biotype: protein_coding
description:
  Probable glucomannan 4-beta-mannosyltransferase 9; Probable mannan synthase which consists of a 4-beta- mannosyltransferase activity on mannan using GDP-mannose. The beta-1,4- mannan product is the backbone for galactomannan synthesis by galactomannan galactosyltransferase. Galactomannan is a noncellulosic polysaccharides of plant cell wall.


ensembl_gene_id: Q67VW6
symbol: OsJ_21406
gene_biotype: protein_coding
description:
  G patch domain-containing protein TGH homolog; Functions as component of microRNA (miRNA) and small interfering RNA (siRNA) biogenesis. May assist Dicer-like (DCL) proteins to efficiently process and/or recruit the precursors of miRNAs and siRNAs.


ensembl_gene_id: Q67W29
symbol: DAPB1
gene_biotype: protein_coding
description:
  Probable 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate.


ensembl_gene_id: Q67W50
symbol: RR25
gene_biotype: protein_coding
description:
  Two-component response regulator ORR25; Transcriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. Belongs to the ARR family. Type-B subfamily.


ensembl_gene_id: Q67W65
symbol: TAF1
gene_biotype: protein_coding
description:
  Transcription initiation factor TFIID subunit 1; Largest component and core scaffold of the TFIID basal transcription factor complex.


ensembl_gene_id: Q67WE2
symbol: CYL2
gene_biotype: protein_coding
description:
  Cyclase-like protein 2; May be involved in response to stresses. Belongs to the Cyclase 1 superfamily.


ensembl_gene_id: Q67WJ2
symbol: FTSH6
gene_biotype: protein_coding
description:
  ATP-dependent zinc metalloprotease FTSH 6, chloroplastic; Probable ATP-dependent zinc metallopeptidase; In the C-terminal section; belongs to the peptidase M41 family.


ensembl_gene_id: Q67WJ8
symbol: NIP2-2
gene_biotype: protein_coding
description:
  Aquaporin NIP2-2; Silicon transporter involved in the distribution of silicon in shoots. Is responsible for the transport of silicon from the xylem to the leaf tissues. Silicon is beneficial to plant growth and helps plants to overcome abiotic and biotic stresses by preventing lodging (falling over) and increasing resistance to pests and diseases, as well as other stresses. In the nodes, involved with LSI2 and LSI3 in silicon intervascular transfer, which is required for the preferential distribution of silicon, such as hyperaccumulation of silicon in the husk.


ensembl_gene_id: Q67WM9
symbol: OS9
gene_biotype: protein_coding
description:
  Protein OS-9 homolog; Lectin which functions in endoplasmic reticulum (ER) quality control and ER-associated degradation (ERAD). May bind terminally misfolded non-glycosylated proteins as well as improperly folded glycoproteins, retain them in the ER, and possibly transfer them to the ubiquitination machinery and promote their degradation.


ensembl_gene_id: Q67WN8
symbol: SPS3-2
gene_biotype: protein_coding
description:
  Probable sucrose-phosphate synthase 3; Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP- glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation (By similarity); Belongs to the glycosyltransferase 1 family.


ensembl_gene_id: Q67WQ7
symbol: GL1-3
gene_biotype: protein_coding
description:
  Very-long-chain aldehyde decarbonylase GL1-3; Aldehyde decarbonylase involved in the conversion of aldehydes to alkanes. Core component of a very-long-chain alkane synthesis complex; Belongs to the sterol desaturase family.


ensembl_gene_id: Q67WR2
symbol: OsJ_22191
gene_biotype: protein_coding
description:
  Probable GDP-L-fucose synthase 1; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction; Belongs to the NAD(P)-dependent epimerase/dehydratase family. Fucose synthase subfamily.


ensembl_gene_id: Q67WR5
symbol: OsJ_22190
gene_biotype: protein_coding
description:
  Putative GDP-L-fucose synthase 2; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction; Belongs to the NAD(P)-dependent epimerase/dehydratase family. Fucose synthase subfamily.


ensembl_gene_id: Q67X31
symbol: SERK3
gene_biotype: protein_coding
description:
  LRR receptor kinase SERK2; May be involved in regulation of plant growth through the brassinosteroid (BR) signaling pathway; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q67X40
symbol: OsJ_019849
gene_biotype: protein_coding
description:
  Casparian strip membrane protein 3; Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion (By similarity).


ensembl_gene_id: Q67X45
symbol: CSLA3
gene_biotype: protein_coding
description:
  Probable glucomannan 4-beta-mannosyltransferase 3; Probable mannan synthase which consists of a 4-beta- mannosyltransferase activity on mannan using GDP-mannose. The beta-1,4- mannan product is the backbone for galactomannan synthesis by galactomannan galactosyltransferase. Galactomannan is a noncellulosic polysaccharides of plant cell wall.


ensembl_gene_id: Q67X79
symbol: Q67X79_ORYSJ
gene_biotype: protein_coding
description:
  Serine/threonine-protein phosphatase 2A activator; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.


ensembl_gene_id: Q688J2
symbol: LAX12_ORYSJ
gene_biotype: protein_coding
description:
  Auxin transporter-like protein 2; Carrier protein involved in proton-driven auxin influx. May mediate the formation of auxin gradient from developing leaves (site of auxin biosynthesis) to tips (By similarity); Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.1) subfamily.


ensembl_gene_id: Q688J5
symbol: Q688J5_ORYSJ
gene_biotype: protein_coding
description:
  Arginyl-tRNA--protein transferase; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family.


ensembl_gene_id: Q688L5
symbol: P0617H07.14
gene_biotype: protein_coding
description:
  Germin-like protein 5-1; May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.


ensembl_gene_id: Q688R1
symbol: MTP1
gene_biotype: protein_coding
description:
  Metal tolerance protein 1; Involved in sequestration of excess zinc in the cytoplasm into vacuoles to maintain zinc homeostasis; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. SLC30A subfamily.


ensembl_gene_id: Q688S6
symbol: YSL4
gene_biotype: protein_coding
description:
  Probable metal-nicotianamine transporter YSL4; May be involved in the transport of nicotianamine-chelated metals; Belongs to the YSL (TC 2.A.67.2) family.


ensembl_gene_id: Q688T8
symbol: AGPL3
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic; Involved in synthesis of starch. Catalyzes the synthesis of ADP-glucose, a molecule that serves as an activated glycosyl donor for alpha-1,4-glucan synthesis. Essential for starch synthesis in leaf chloroplasts.


ensembl_gene_id: Q688U0
symbol: Q688U0_ORYSJ
gene_biotype: protein_coding
description:
  Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.


ensembl_gene_id: Q688U6
symbol: Q688U6_ORYSJ
gene_biotype: protein_coding
description:
  Os05g0579000 protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: Q688W0
symbol: Q688W0_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J023121D20, full insert sequence; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: Q688X1
symbol: Q688X1_ORYSJ
gene_biotype: protein_coding
description:
  Eukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7- methylguanosine cap of a subset of mRNAs.


ensembl_gene_id: Q689G6
symbol: PRR95
gene_biotype: protein_coding
description:
  Two-component response regulator-like PRR95; Controls photoperiodic flowering response. Seems to be one of the component of the circadian clock. Expression of several members of the ARR-like family is controlled by circadian rhythm. The particular coordinated sequential expression of PRR73, PRR37, PRR95, PRR59 and PPR1 result to circadian waves that may be at the basis of the endogenous circadian clock (By similarity).


ensembl_gene_id: Q689G9
symbol: PRR1
gene_biotype: protein_coding
description:
  Two-component response regulator-like PRR1; Controls photoperiodic flowering response. Seems to be one of the component of the circadian clock. Expression of several members of the ARR-like family is controlled by circadian rhythm. The particular coordinated sequential expression of PRR73, PRR37, PRR95, PRR59 and PPR1 result to circadian waves that may be at the basis of the endogenous circadian clock (By similarity).


ensembl_gene_id: Q68Y49
symbol: CIPK19
gene_biotype: protein_coding
description:
  CBL-interacting protein kinase 19; CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity); Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.


ensembl_gene_id: Q68Y52
symbol: RAC2
gene_biotype: protein_coding
description:
  Rac-like GTP-binding protein 2; Inactive GDP-bound Rho GTPases reside in the cytosol, are found in a complex with Rho GDP-dissociation inhibitors (Rho GDIs), and are released from the GDI protein in order to translocate to membranes upon activation.


ensembl_gene_id: Q69IL4
symbol: RF2a
gene_biotype: protein_coding
description:
  Transcription factor RF2a; Transcription factor probably involved in vascular development and shoot tissue organization. Binds to the DNA sequence 5'-CCGAGTGTGCCCCTGG-3' present in the promoter region Box II of the phloem-specific rice tungro bacilliform virus (RTBV) promoter. May regulate tissue-specific expression of the RTBV promoter and virus replication.


ensembl_gene_id: Q69IM9
symbol: CPK22
gene_biotype: protein_coding
description:
  Calcium-dependent protein kinase 22; May play a role in signal transduction pathways that involve calcium as a second messenger; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.


ensembl_gene_id: Q69J40
symbol: NFYB10
gene_biotype: protein_coding
description:
  Nuclear transcription factor Y subunit B-10; Component of the NF-Y/HAP transcription factor complex.


ensembl_gene_id: Q69JB4
symbol: Q69JB4_ORYSJ
gene_biotype: protein_coding
description:
  Os09g0307800 protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.


ensembl_gene_id: Q69JN6
symbol: BRL1
gene_biotype: protein_coding
description:
  Brassinosteroid LRR receptor kinase BRL1; May be involved in brassenosteroid (BR) perception in roots. Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q69JW3
symbol: SUT5
gene_biotype: protein_coding
description:
  Sucrose transport protein SUT5; Responsible for the transport of sucrose into the cell, with the concomitant uptake of protons (symport system). Can also transport other glucosides such as maltose, arbutin, salicin, helicin, alpha- phenylglucoside and beta-phenylglucoside.


ensembl_gene_id: Q69JZ7
symbol: XCT
gene_biotype: protein_coding
description:
  Protein XAP5 CIRCADIAN TIMEKEEPER; Involved in light regulation of the circadian clock and photomorphogenesis; Belongs to the FAM50 family.


ensembl_gene_id: Q69K55
symbol: HAL3
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase; Catalyzes the decarboxylation of 4'- phosphopantothenoylcysteine to 4'-phosphopantetheine, a key step in coenzyme A biosynthesis. Involved in salt and osmotic tolerance, and light-regulated plant growth. Trimerization of HAL3 recruits and activates the E3 ubiquitin-protein ligase HIP1, which leads to the degradation of cell cycle suppressors, resulting in enhancement of cell division and plant growth. HAL3 function in cell division seems to be independent from its PPC decarboxylase activity. Belongs to the HFCD (homooligomeric flavin containin [...]


ensembl_gene_id: Q69KL9
symbol: RSZ21A
gene_biotype: protein_coding
description:
  Serine/arginine-rich splicing factor RSZ21A; Involved in pre-mRNA splicing; Belongs to the splicing factor SR family.


ensembl_gene_id: Q69KN0
symbol: EMF2B
gene_biotype: protein_coding
description:
  Polycomb group protein EMF2B; Polycomb group (PcG) protein. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. They act via the methylation of histones, rendering chromatin heritably changed in its expressibility (Probable). Polycomb group (PcG) protein involved in the repression of flowering under long day (LD) conditions. Regulates floret development ; Belongs to th [...]


ensembl_gene_id: Q69L19
symbol: CSLC2
gene_biotype: protein_coding
description:
  Probable xyloglucan glycosyltransferase 2; Probable beta-1,4-glucan synthase rather involved in the synthesis of the xyloglucan backbone than cellulose. Seems to work simultaneously with xyloglucan 6-xylosyltransferase. Xyloglucan is a noncellulosic polysaccharides of plant cell wall and consists of a glucan backbone substituted by xylose, galactose and fucose (By similarity); Belongs to the glycosyltransferase 2 family. Plant cellulose synthase-like C subfamily.


ensembl_gene_id: Q69L87
symbol: HAK22
gene_biotype: protein_coding
description:
  Potassium transporter 22; High-affinity potassium transporter; Belongs to the HAK/KUP transporter (TC 2.A.72.3) family.


ensembl_gene_id: Q69L93
symbol: GL1-8
gene_biotype: protein_coding
description:
  Very-long-chain aldehyde decarbonylase GL1-8; Aldehyde decarbonylase involved in the conversion of aldehydes to alkanes. Core component of a very-long-chain alkane synthesis complex.


ensembl_gene_id: Q69L99
symbol: LAC14
gene_biotype: protein_coding
description:
  Laccase-14; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family.


ensembl_gene_id: Q69LA1
symbol: B1026C12.12
gene_biotype: protein_coding
description:
  Probable proline transporter 2; Proline transporter that mediates proline transport across the plasma membrane; Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.3) subfamily.


ensembl_gene_id: Q69LA6
symbol: PDX11
gene_biotype: protein_coding
description:
  Probable pyridoxal 5'-phosphate synthase subunit PDX1.1; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by PDX2. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme- catalyzed isomerization of RBP and G3P, respectively. Also plays an indirect role in resistance to singlet oxygen-generating photosensitizers; Belongs to the PdxS/SNZ family.


ensembl_gene_id: Q69LD8
symbol: GA20OX3
gene_biotype: protein_coding
description:
  Gibberellin 20 oxidase 3; Key oxidase enzyme in the biosynthesis of gibberellin. Catalyzes the formation of bioactive gibberellins (GAs) via a three- step oxidation at C-20 of the GA skeleton. Controls the elongation of the vegetative shoot and plant height by the regulation of active gibberellin levels.


ensembl_gene_id: Q69LD9
symbol: Q69LD9_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:001-007-F03, full insert sequence; Belongs to the iron/ascorbate-dependent oxidoreductase family.


ensembl_gene_id: Q69LE0
symbol: SAP10
gene_biotype: protein_coding
description:
  Zinc finger A20 and AN1 domain-containing stress-associated protein 10; May be involved in environmental stress response.


ensembl_gene_id: Q69LE7
symbol: PNP1
gene_biotype: protein_coding
description:
  Probable polyribonucleotide nucleotidyltransferase 1, chloroplastic; Involved in the metabolism of all major classes of plastid RNAs. Required for efficient 3'-end processing of mRNAs and 3'-end maturation of rRNA transcripts, but is not sufficient to mediate their degradation. Mediates tRNA degradation. May function as a poly(A) mRNA 3'-5' degrading phosphorylase (By similarity).


ensembl_gene_id: Q69LX2
symbol: DCL2B
gene_biotype: protein_coding
description:
  Endoribonuclease Dicer homolog 2b; Probably involved in the RNA silencing pathway. May cleave double-stranded RNA to produce short 21-24 nucleotides (nt) RNAs which target the selective destruction of complementary RNAs (By similarity). Belongs to the helicase family. Dicer subfamily.


ensembl_gene_id: Q69MK0
symbol: Q69MK0_ORYSJ
gene_biotype: protein_coding
description:
  Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.


ensembl_gene_id: Q69MP1
symbol: Q69MP1_ORYSJ
gene_biotype: protein_coding
description:
  Os09g0551300 protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: Q69NC3
symbol: Q69NC3_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J013106G10, full insert sequence; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: Q69NG5
symbol: OJ1531_B07.11
gene_biotype: protein_coding
description:
  Probable 6-phosphogluconolactonase 4, chloroplastic; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily.


ensembl_gene_id: Q69NP0
symbol: ATG12
gene_biotype: protein_coding
description:
  Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagy vesicles formation. Conjugation with ATG5 through a ubiquitin-like conjugating system is essential for its function. ATG12/ATG5 conjugate has an essential role in plant nutrient recycling (By similarity); Belongs to the ATG12 family.


ensembl_gene_id: Q69NX5
symbol: NCED4
gene_biotype: protein_coding
description:
  9-cis-epoxycarotenoid dioxygenase NCED4, chloroplastic; Has a 11,12(11',12') 9-cis epoxycarotenoid cleavage activity. Catalyzes the first step of abscisic-acid biosynthesis from carotenoids.


ensembl_gene_id: Q69P51
symbol: CESA9
gene_biotype: protein_coding
description:
  Cellulose synthase A catalytic subunit 9 [UDP-forming]; Catalytic subunit of cellulose synthase terminal complexes ('rosettes'), required for beta-1,4-glucan microfibril crystallization, a major mechanism of the cell wall formation (By similarity). Involved in the secondary cell wall formation; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.


ensembl_gene_id: Q69P80
symbol: COPT5.1
gene_biotype: protein_coding
description:
  Copper transporter 5.1; Involved in the transport of copper; Belongs to the copper transporter (Ctr) (TC 1.A.56) family. SLC31A subfamily.


ensembl_gene_id: Q69P94
symbol: TIFY10C
gene_biotype: protein_coding
description:
  Protein TIFY 10c; Repressor of jasmonate (JA) responses. Acts as a repressor of JA-induced resistance to the bacterial blight pathogen Xanthomonas oryzae pv. oryzae (Xoo). Regulates JA-induced accumulation of linalool at the transcriptional level of linalool synthase gene LIS. Linalool is important for resistance to bacterial blight pathogen Xoo.


ensembl_gene_id: Q69PA8
symbol: GL1-1
gene_biotype: protein_coding
description:
  Very-long-chain aldehyde decarbonylase GL1-1; Aldehyde decarbonylase involved in the conversion of aldehydes to alkanes. Core component of a very-long-chain alkane synthesis complex; Belongs to the sterol desaturase family.


ensembl_gene_id: Q69PS9
symbol: Q69PS9_ORYSJ
gene_biotype: protein_coding
description:
  AT-hook motif nuclear-localized protein; Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs).


ensembl_gene_id: Q69PX2
symbol: Q69PX2_ORYSJ
gene_biotype: protein_coding
description:
  DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family.


ensembl_gene_id: Q69Q02
symbol: DPE2
gene_biotype: protein_coding
description:
  4-alpha-glucanotransferase DPE2; Cytosolic alpha-glucanotransferase essential for the cytosolic metabolism of maltose, an intermediate on the pathway by which starch is converted to sucrose in leaves at night.


ensembl_gene_id: Q69Q47
symbol: CIPK24
gene_biotype: protein_coding
description:
  CBL-interacting protein kinase 24; Involved in the regulatory pathway for the control of intracellular Na(+) and K(+) homeostasis and salt tolerance. Operates in synergy with CBL4 to activate the plasma membrane Na(+)/H(+) antiporter SOS1. CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium- dependent manner.


ensembl_gene_id: Q69QA6
symbol: MCM9
gene_biotype: protein_coding
description:
  Probable DNA helicase MCM9; Probable DNA helicase that may play a role in DNA repair during meiosis.


ensembl_gene_id: Q69QJ7
symbol: MGD1
gene_biotype: protein_coding
description:
  Probable monogalactosyldiacylglycerol synthase 1, chloroplastic; Involved in the synthesis of the major structural component of photosynthetic membranes.


ensembl_gene_id: Q69QQ6
symbol: HSP81-2
gene_biotype: protein_coding
description:
  Heat shock protein 81-2; Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co- chaperones that modulate its substrate recognition, ATPase cycle and chaperone function (By similarity); Belongs to the heat shock protein 90 family.


ensembl_gene_id: Q69RC4
symbol: ATG8A
gene_biotype: protein_coding
description:
  Autophagy-related protein 8A; Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton; Belongs to the ATG8 family.


ensembl_gene_id: Q69RI8
symbol: HAK14
gene_biotype: protein_coding
description:
  Probable potassium transporter 14; High-affinity potassium transporter; Belongs to the HAK/KUP transporter (TC 2.A.72.3) family.


ensembl_gene_id: Q69RJ0
symbol: GLU
gene_biotype: protein_coding
description:
  Ferredoxin-dependent glutamate synthase, chloroplastic; Involved in glutamate biosynthesis in leaf. Required for the reassimilation of ammonium ions generated during photorespiration (By similarity).


ensembl_gene_id: Q69S39
symbol: petC
gene_biotype: protein_coding
description:
  Cytochrome b6-f complex iron-sulfur subunit, chloroplastic; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.


ensembl_gene_id: Q69S81
symbol: OsJ_07236
gene_biotype: protein_coding
description:
  Phosphopantothenate--cysteine ligase 1; Catalyzes the first step in the biosynthesis of coenzyme A from vitamin B5, where cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine; Belongs to the PPC synthetase family.


ensembl_gene_id: Q69SA9
symbol: PDIL5-4
gene_biotype: protein_coding
description:
  Protein disulfide isomerase-like 5-4; Acts as a protein-folding catalyst that interacts with nascent polypeptides to catalyze the formation, isomerization, and reduction or oxidation of disulfide bonds. May play a role in storage protein biogenesis (By similarity).


ensembl_gene_id: Q69SP5
symbol: ER1
gene_biotype: protein_coding
description:
  LRR receptor-like serine/threonine-protein kinase ER1; Receptor kinase involved in the regulation of thermotolerance. Functions as positive regulator of heat tolerance. May be involved in the regulation of cell proliferation and cell growth.


ensembl_gene_id: Q69ST5
symbol: Q69ST5_ORYSJ
gene_biotype: protein_coding
description:
  GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.


ensembl_gene_id: Q69ST6
symbol: PDIL1-3
gene_biotype: protein_coding
description:
  Protein disulfide isomerase-like 1-3; Acts as a protein-folding catalyst that interacts with nascent polypeptides to catalyze the formation, isomerization, and reduction or oxidation of disulfide bonds. May play a role in storage protein biogenesis (By similarity).


ensembl_gene_id: Q69SV0
symbol: APX8
gene_biotype: protein_coding
description:
  Probable L-ascorbate peroxidase 8, chloroplastic; Involved in defense response and tolerance to the bacterial pathogen Xanthomonas oryzae pv. oryzae (Xoo). Plays an important role in hydrogen peroxide removal during infection by Xoo. Involved in response to abiotic stress. Plays a role in hydrogen peroxide removal durings salt stress; Belongs to the peroxidase family. Ascorbate peroxidase subfamily.


ensembl_gene_id: Q69T22
symbol: FTIP1
gene_biotype: protein_coding
description:
  FT-interacting protein 1; Involved in the export of the long day-specific flower- promoting signal (florigen) RFT1 from the phloem companion cells to sieve elements. Promotes flowering under long days through the transport of RFT1 from the leaves to the shoot apical meristem (SAM).


ensembl_gene_id: Q69T29
symbol: AMT3-3
gene_biotype: protein_coding
description:
  Ammonium transporter 3 member 3; Involved in ammonium transport; Belongs to the ammonia transporter channel (TC 1.A.11.2) family.


ensembl_gene_id: Q69T31
symbol: CINV1
gene_biotype: protein_coding
description:
  Cytosolic invertase 1; Cytosolic invertase that cleaves sucrose into glucose and fructose and is involved in the regulation of primary root elongation, lateral root formation, floral transition and pollen development.


ensembl_gene_id: Q69T51
symbol: LYP6
gene_biotype: protein_coding
description:
  LysM domain-containing GPI-anchored protein LYP6; Functions in innate immunity. Functions as pattern recognition receptor (PRR), sensing bacterial peptidoglycan (PGN) and fungal chitin at the cell surface. Involved in resistance against the bacterial pathogen Xanthomonas oryzae pv. oryzae (Xoo) and the fungal pathogen Magnaporthe oryzae. Binds PGN and fungal chitin in vitro. Involved in microbe-associated molecular patterns (MAMPs) perception and participates to the activation of defense genes against the bacterial pathogen Xanthomonas oryzae pv. oryzicola (Xoc) or the fungal pathogen  [...]


ensembl_gene_id: Q69T58
symbol: ROC8
gene_biotype: protein_coding
description:
  Homeobox-leucine zipper protein ROC8; Probable transcription factor; Belongs to the HD-ZIP homeobox family. Class IV subfamily.


ensembl_gene_id: Q69T94
symbol: PHT1-10
gene_biotype: protein_coding
description:
  Probable inorganic phosphate transporter 1-10; High-affinity transporter for external inorganic phosphate. Belongs to the major facilitator superfamily. phosphate:H(+) symporter (TC 2.A.1.9) family.


ensembl_gene_id: Q69T99
symbol: AGPS1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase small subunit 1, chloroplastic/amyloplastic; Involved in synthesis of starch. Catalyzes the synthesis of ADP-glucose, a molecule that serves as an activated glycosyl donor for alpha-1,4-glucan synthesis. Essential for starch synthesis in leaf chloroplasts and endosperm amyloplasts.


ensembl_gene_id: Q69TB1
symbol: P0592C05.24
gene_biotype: protein_coding
description:
  Ferrochelatase-1, chloroplastic; Catalyzes the ferrous insertion into protoporphyrin IX; Belongs to the ferrochelatase family.


ensembl_gene_id: Q69TF4
symbol: P0529B09.16
gene_biotype: protein_coding
description:
  Pantothenate kinase 1; Catalyzes the phosphorylation of pantothenate the first step in CoA biosynthesis. May play a role in the physiological regulation of the intracellular CoA concentration (By similarity); Belongs to the type II pantothenate kinase family.


ensembl_gene_id: Q69TG5
symbol: MADS55
gene_biotype: protein_coding
description:
  MADS-box transcription factor 55; Transcription factor that acts as negative regulator of brassinosteroid signaling.


ensembl_gene_id: Q69TH4
symbol: OPR2
gene_biotype: protein_coding
description:
  Putative 12-oxophytodienoate reductase 2; Putative oxophytodienoate reductase that may be involved in the biosynthesis or metabolism of oxylipin signaling molecules. Belongs to the NADH:flavin oxidoreductase/NADH oxidase family.


ensembl_gene_id: Q69TH6
symbol: OPR3
gene_biotype: protein_coding
description:
  Putative 12-oxophytodienoate reductase 3; Putative oxophytodienoate reductase that may be involved in the biosynthesis or metabolism of oxylipin signaling molecules. Belongs to the NADH:flavin oxidoreductase/NADH oxidase family.


ensembl_gene_id: Q69TH8
symbol: OPR4
gene_biotype: protein_coding
description:
  Putative 12-oxophytodienoate reductase 4; Putative oxophytodienoate reductase that may be involved in the biosynthesis or metabolism of oxylipin signaling molecules. Belongs to the NADH:flavin oxidoreductase/NADH oxidase family.


ensembl_gene_id: Q69TI0
symbol: OPR5
gene_biotype: protein_coding
description:
  Putative 12-oxophytodienoate reductase 5; Putative oxophytodienoate reductase that may be involved in the biosynthesis or metabolism of oxylipin signaling molecules. Belongs to the NADH:flavin oxidoreductase/NADH oxidase family.


ensembl_gene_id: Q69TI2
symbol: OPR6
gene_biotype: protein_coding
description:
  Putative 12-oxophytodienoate reductase 6; Putative oxophytodienoate reductase that may be involved in the biosynthesis or metabolism of oxylipin signaling molecules. Belongs to the NADH:flavin oxidoreductase/NADH oxidase family.


ensembl_gene_id: Q69TN4
symbol: TPKC
gene_biotype: protein_coding
description:
  Two pore potassium channel c; Inward-rectifying potassium channel; Belongs to the two pore domain potassium channel (TC 1.A.1.7) family.


ensembl_gene_id: Q69TU6
symbol: IAA22
gene_biotype: protein_coding
description:
  Auxin-responsive protein IAA22; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations; Belongs to the Aux/IAA family.


ensembl_gene_id: Q69TW5
symbol: BZIP46
gene_biotype: protein_coding
description:
  bZIP transcription factor 46; Transcription factor involved in abscisic acid (ABA) signaling pathway. Transcription factor activity is fully activated by ABA. Acts as positive regulator of the expression of abiotic stress-responsive genes through an ABA-dependent signaling pathway. Acts as positive regulator of ABA signaling and drought stress tolerance. Plays an important role in ABA and auxin responses. Involved in ABA signaling and stress responses by directly binding to the ABA-responsive element (ABRE)-containing genes, especially WRKY family genes. Modulates response to auxin. Su [...]


ensembl_gene_id: Q69TY4
symbol: PRXIIE-1
gene_biotype: protein_coding
description:
  Peroxiredoxin-2E-1, chloroplastic; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides (By similarity). May be involved in chloroplast redox homeostasis (By similarity).


ensembl_gene_id: Q69TY5
symbol: SPP
gene_biotype: protein_coding
description:
  Stromal processing peptidase, chloroplastic; Cleaves presequences (transit peptides) from chloroplastic protein precursors. Initially recognizes a precursor by binding to the C-terminus of its transit peptide and then removes the transit peptide in a single endoproteolytic step. In a next step, pursues the cleavage of transit peptide to a subfragment form. Belongs to the peptidase M16 family.


ensembl_gene_id: Q69U49
symbol: RMR1
gene_biotype: protein_coding
description:
  Receptor homology region, transmembrane domain- and RING domain-containing protein 2; Involved in the trafficking of vacuolar proteins. May function as a sorting receptor for protein trafficking to the protein storage vacuole (PSV) (By similarity).


ensembl_gene_id: Q69UD7
symbol: AT8
gene_biotype: protein_coding
description:
  Acyl transferase 8; Involved in the incorporation of ferulate into the cell wall. May act as arabinoxylan feruloyl transferase.


ensembl_gene_id: Q69UE6
symbol: AT10
gene_biotype: protein_coding
description:
  Acyl transferase 10; Involved in the incorporation of ferulate into the cell wall. May act as arabinoxylan feruloyl transferase. May function as p-coumaroyl-CoA transferase involved in glucuronoarabinoxylan modification.


ensembl_gene_id: Q69UI8
symbol: Q69UI8_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:001-011-G09, full insert sequence; Belongs to the eukaryotic ribosomal protein P1/P2 family.


ensembl_gene_id: Q69UP6
symbol: AGO18
gene_biotype: protein_coding
description:
  Protein argonaute 18; Probably involved in the RNA silencing pathway. May bind to short RNAs such as microRNAs (miRNAs) or short interfering RNAs (siRNAs), and represses the translation of mRNAs which are complementary to them (By similarity).


ensembl_gene_id: Q69UP7
symbol: LOL1
gene_biotype: protein_coding
description:
  Protein LOL1; Putative zinc finger that may be involved in programmed cell death and defense response.


ensembl_gene_id: Q69UZ3
symbol: OJ1165_F02.125
gene_biotype: protein_coding
description:
  Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.


ensembl_gene_id: Q69V10
symbol: BHLH062
gene_biotype: protein_coding
description:
  Transcription factor BHLH062; Transcription factor that plays a positive role in salt stress tolerance. Interacts with TIFY11A/JAZ9 and binds to the promoter of some potassium ion transporter genes to regulate potassium homeostasis during salt stress.


ensembl_gene_id: Q69V23
symbol: CESA3
gene_biotype: protein_coding
description:
  Probable cellulose synthase A catalytic subunit 3 [UDP-forming]; Probable catalytic subunit of cellulose synthase terminal complexes ('rosettes'), required for beta-1,4-glucan microfibril crystallization, a major mechanism of the cell wall formation.


ensembl_gene_id: Q69VD5
symbol: PHN1
gene_biotype: protein_coding
description:
  Protein argonaute PNH1; Probably involved in the RNA silencing pathway. May bind to short RNAs such as microRNAs (miRNAs) or short interfering RNAs (siRNAs), and represses the translation of mRNAs which are complementary to them (By similarity). Plays a role in the maintenance of the indeterminate state of the stem cells in the shoot apical meristem (SAM). Regulates leaf formation through vascular development and may be involved in determining the central domain of the leaf founder region; Belongs to the argonaute family. Ago subfamily.


ensembl_gene_id: Q69VE0
symbol: IAA23
gene_biotype: protein_coding
description:
  Auxin-responsive protein IAA23; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.


ensembl_gene_id: Q69VG1
symbol: CIGR1
gene_biotype: protein_coding
description:
  Chitin-inducible gibberellin-responsive protein 1; May play a regulatory role in the early step of oligosaccharide elicitor response, downstream of the membrane- associated high-affinity chitin-binding protein. Belongs to the GRAS family.


ensembl_gene_id: Q69VR7
symbol: PPT1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate/phosphate translocator 1, chloroplastic; Phosphoenolpyruvate/phosphate translocator that transports phosphoenolpyruvate (PEP) and dihydroxyacetone phosphate. Belongs to the TPT transporter family. PPT (TC 2.A.7.9) subfamily.


ensembl_gene_id: Q69WS3
symbol: BHLH094
gene_biotype: protein_coding
description:
  Transcription factor BHLH094; Transcription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes.


ensembl_gene_id: Q69X19
symbol: Q69X19_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J013118F23, full insert sequence; Belongs to the mitochondrial carrier (TC 2.A.29) family.


ensembl_gene_id: Q69X58
symbol: CYP76M7
gene_biotype: protein_coding
description:
  Ent-cassadiene C11-alpha-hydroxylase 1; Enzyme of the diterpenoid metabolism involved in the biosynthesis of antibacterial oryzalides such as phytocassane. Can use ent-cassadiene as substrate, but not C11-alpha-hydroxy-ent-cassadiene, ent-pimaradiene, ent-sandaracopimaradiene, ent-kaurene, ent-isokaurene, syn-pimaradiene, syn-stemarene, syn-stemodene. Belongs to the cytochrome P450 family.


ensembl_gene_id: Q69XJ0
symbol: SPX1
gene_biotype: protein_coding
description:
  SPX domain-containing protein 1; Involved in plant adaptation to phosphate starvation. Inhibits PHR2 DNA-binding activity via a Pi- dependent protein interaction. Suppresses the regulation on expression of PT2 by PHR2 and accumulation of shoot Pi. Optimizes growth under phosphate-limited conditions through a negative feedback loop of the PSI (phosphate starvation- induced) signaling pathway. Regulates the expression of SPX2, SPX3 and SPX5. May be an important link between signal transduction pathways related to phosphate starvation and cold stress.


ensembl_gene_id: Q69XJ1
symbol: Q69XJ1_ORYSJ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.


ensembl_gene_id: Q69XJ4
symbol: HO1
gene_biotype: protein_coding
description:
  Heme oxygenase 1, chloroplastic; Catalyzes the opening of the heme ring to form the open-chain tetrapyrrole biliverdin IX with the release of iron and carbon monoxide (CO). Is a key enzyme in the synthesis of the chromophore of the phytochrome family of plant photoreceptors. Essential for photoperiod response and repression of flowering through cytochromes that inhibit flowering by affecting both HD1 and EHD1 flowering pathways.


ensembl_gene_id: Q69XK5
symbol: CESA11
gene_biotype: protein_coding
description:
  Putative cellulose synthase A catalytic subunit 11 [UDP-forming]; Catalytic subunit of cellulose synthase terminal complexes ('rosettes'), required for beta-1,4-glucan microfibril crystallization, a major mechanism of the cell wall formation.


ensembl_gene_id: Q69XM6
symbol: CYP734A4
gene_biotype: protein_coding
description:
  Cytochrome P450 734A4; Cytochrome P450 involved in brassinosteroids (BRs) inactivation and regulation of BRs homeostasis. Is a multifunctional and multisubstrate enzyme that controls the endogenous bioactive BR content both by direct inactivation of castasterone and by decreasing the levels of BR precursors. Catalyzes the oxidation of carbon 22 hydroxylated BR intermediates to produce C26 oxidized metabolites.


ensembl_gene_id: Q69XM7
symbol: RAN3
gene_biotype: protein_coding
description:
  GTP-binding nuclear protein Ran-3; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (By similarity).


ensembl_gene_id: Q69XV0
symbol: BZIP50
gene_biotype: protein_coding
description:
  bZIP transcription factor 50; Transcription factor involved in endoplasmic reticulum (ER) stress response. Acts downstream of the ER stress sensors IRE1, BZIP39 and BZIP60 to activate BiP chaperone genes.


ensembl_gene_id: Q69XV9
symbol: EXPA16
gene_biotype: protein_coding
description:
  Expansin-A16; May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity).


ensembl_gene_id: Q6ASS2
symbol: LOL3
gene_biotype: protein_coding
description:
  Protein LOL3; Putative zinc finger that may be involved in programmed cell death and defense response.


ensembl_gene_id: Q6ASU6
symbol: Q6ASU6_ORYSJ
gene_biotype: protein_coding
description:
  Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling.


ensembl_gene_id: Q6AT10
symbol: IAA15
gene_biotype: protein_coding
description:
  Auxin-responsive protein IAA15; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.


ensembl_gene_id: Q6AT11
symbol: Q6AT11_ORYSJ
gene_biotype: protein_coding
description:
  Serine/threonine protein phosphatase 2A regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.


ensembl_gene_id: Q6AT12
symbol: GA3OX1
gene_biotype: protein_coding
description:
  Gibberellin 3-beta-dioxygenase 1; Catalyzes the 3-beta-hydroxylation of the inactive gibberellin precursors, leading to the formation of bioactive gibberellins. In vitro, converts the precursors GA20, GA5, GA44 and GA9 to the corresponding 3-beta-hydroxylated bioactive products GA1, GA3, GA38 and GA4, respectively. Involved in the production of bioactive GA for vegetative growth and development. May possess 2,3-desaturase activity, catalyzing the conversion of GA9 to 2,3-dehydro-GA9, and GA20 to GA5 (2,3-dehydro GA20). May possess 2-beta-hydroxylase activity, catalyzing the conversion  [...]


ensembl_gene_id: Q6AT26
symbol: CESA1
gene_biotype: protein_coding
description:
  Probable cellulose synthase A catalytic subunit 1 [UDP-forming]; Probable catalytic subunit of cellulose synthase terminal complexes ('rosettes'), required for beta-1,4-glucan microfibril crystallization, a major mechanism of the cell wall formation.


ensembl_gene_id: Q6AT32
symbol: GT43E
gene_biotype: protein_coding
description:
  Probable beta-1,4-xylosyltransferase GT43E; Probable beta-1,4-xylosyltransferase involved in xylan biosynthesis in cell walls.


ensembl_gene_id: Q6AT33
symbol: IAA19
gene_biotype: protein_coding
description:
  Auxin-responsive protein IAA19; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.


ensembl_gene_id: Q6AT90
symbol: APG
gene_biotype: protein_coding
description:
  Transcription factor APG; Atypical bHLH transcription factor that acts as negative regulator of grain size. Binds the transcription factor ILI6 and forms a heterodimer of antagonistic bHLH transcription factors that regulates grain length and weight by controlling cell elongation in lemma and palea. May be involved in the control of lamina inclination through brassinosteroid signaling pathway.


ensembl_gene_id: Q6ATB2
symbol: CRSH2
gene_biotype: protein_coding
description:
  Probable GTP diphosphokinase CRSH2, chloroplastic; Possesses calcium-dependent ppGpp (guanosine 3'-diphosphate 5'-diphosphate) synthetase activity in vitro and is able to functionally complement E.coli relA mutants. May be involved in a rapid plant ppGpp-mediated response to pathogens and other stresses. Belongs to the RelA/SpoT family.


ensembl_gene_id: Q6ATB4
symbol: CRSH1
gene_biotype: protein_coding
description:
  Probable GTP diphosphokinase CRSH1, chloroplastic; Possesses calcium-dependent ppGpp (guanosine 3'-diphosphate 5'-diphosphate) synthetase activity in vitro and is able to functionally complement E.coli relA mutants. May be involved in a rapid plant ppGpp-mediated response to pathogens and other stresses. Belongs to the RelA/SpoT family.


ensembl_gene_id: Q6ATJ8
symbol: RH16_ORYSJ
gene_biotype: protein_coding
description:
  DEAD-box ATP-dependent RNA helicase 16; Belongs to the DEAD box helicase family. DDX56/DBP9 subfamily.


ensembl_gene_id: Q6ATR0
symbol: Y14B
gene_biotype: protein_coding
description:
  RNA-binding protein Y14B; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the core components remain bound to spliced mRNAs throughout all stages of mRNA metabolism thereby influe [...]


ensembl_gene_id: Q6ATS0
symbol: CHLD
gene_biotype: protein_coding
description:
  Magnesium-chelatase subunit ChlD, chloroplastic; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. The reaction takes place in two steps, with an ATP-dependent activation followed by an ATP-dependent chelation step. Belongs to the Mg-chelatase subunits D/I family.


ensembl_gene_id: Q6ATV4
symbol: ACA3
gene_biotype: protein_coding
description:
  Calcium-transporting ATPase 3, plasma membrane-type; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles.


ensembl_gene_id: Q6ATW6
symbol: G1L8
gene_biotype: protein_coding
description:
  Protein G1-like8; Probable transcription regulator that acts as a developmental regulator by promoting cell growth in response to light; Belongs to the plant homeotic and developmental regulators ALOG protein family.


ensembl_gene_id: Q6AU07
symbol: DBR1
gene_biotype: protein_coding
description:
  Lariat debranching enzyme; Cleaves the 2'-5' phosphodiester linkage at the branch point of lariat intron pre-mRNAs after splicing and converts them into linear molecules that are subsequently degraded. It thereby facilitates ribonucleotide turnover. It may also participate in retrovirus replication via an RNA lariat intermediate in cDNA synthesis (By similarity); Belongs to the lariat debranching enzyme family.


ensembl_gene_id: Q6AU10
symbol: Q6AU10_ORYSJ
gene_biotype: protein_coding
description:
  Mitochondrial 60S ribosomal protein L6, putative, expressed; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: Q6AU53
symbol: CSLC9
gene_biotype: protein_coding
description:
  Probable xyloglucan glycosyltransferase 9; Probable beta-1,4-glucan synthase rather involved in the synthesis of the xyloglucan backbone than cellulose. Seems to work simultaneously with xyloglucan 6-xylosyltransferase. Xyloglucan is a noncellulosic polysaccharides of plant cell wall and consists of a glucan backbone substituted by xylose, galactose and fucose (By similarity).


ensembl_gene_id: Q6AU80
symbol: ISA2
gene_biotype: protein_coding
description:
  Isoamylase 2, chloroplastic; Starch-debranching enzyme involved in amylopectin biosynthesis in endosperm. Functions by removing excess branches or improper branches that interfere with the formation of double helices of the cluster chains of amylopectin and crystallization of starch. Works together with ISA1 as heterooligomer. The heterooligomer ISA1 and ISA2 possesses higher affinity than the ISA1 homooligomer for various branched polyglucans in vitro, but no marked differences exist in chain preferences for debranching of amylopectin and phytoglycogen between these forms.


ensembl_gene_id: Q6AU90
symbol: BZIP39
gene_biotype: protein_coding
description:
  bZIP transcription factor 39; Transcription factor involved in endoplasmic reticulum (ER) stress response. Acts as ER stress sensor and activates the transcription factor BZIP50 and the chaperone BIP1.


ensembl_gene_id: Q6AUC6
symbol: QSOX1
gene_biotype: protein_coding
description:
  Sulfhydryl oxidase 1; Catalyzes the oxidation of sulfhydryl groups in peptide and protein thiols to disulfides with the reduction of oxygen to hydrogen peroxide. May contribute to disulfide bond formation in a variety of secreted proteins (By similarity).


ensembl_gene_id: Q6AUF3
symbol: UREG
gene_biotype: protein_coding
description:
  Urease accessory protein G; Required for the maturation and activation of urease via the functional incorporation of the urease nickel metallocenter. Belongs to the SIMIBI class G3E GTPase family. UreG subfamily.


ensembl_gene_id: Q6AUG0
symbol: U2AF35B
gene_biotype: protein_coding
description:
  Splicing factor U2af small subunit B; Necessary for the splicing of pre-mRNA; Belongs to the splicing factor SR family.


ensembl_gene_id: Q6AUK5
symbol: MSRB3
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase B3, chloroplastic; Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. MSRB family specifically reduces the MetSO R- enantiomer (By similarity).


ensembl_gene_id: Q6AUK6
symbol: OsJ_18494
gene_biotype: protein_coding
description:
  Transcription termination factor MTERF4, chloroplastic; Transcription termination factor required for processing and steady-state levels of plastid transcripts. Required for splicing of the chloroplastic group II intron. Required for the accumulation of 16S and 23S ribosomes; Belongs to the mTERF family.


ensembl_gene_id: Q6AUN9
symbol: Q6AUN9_ORYSJ
gene_biotype: protein_coding
description:
  Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.


ensembl_gene_id: Q6AUQ7
symbol: DRM3
gene_biotype: protein_coding
description:
  Probable inactive DNA (cytosine-5)-methyltransferase DRM3; Involved in de novo DNA methylation. Involved in RNA-directed DNA methylation (RdDM).


ensembl_gene_id: Q6AUR2
symbol: GLB
gene_biotype: protein_coding
description:
  Nitrogen regulatory protein P-II homolog; Participates in sensing carbon and organic nitrogen status and regulates some steps of primary carbon and nitrogen metabolism.


ensembl_gene_id: Q6AUV1
symbol: XDH
gene_biotype: protein_coding
description:
  Xanthine dehydrogenase; Key enzyme involved in purine catabolism. Catalyzes the oxidation of hypoxanthine to xanthine and the oxidation of xanthine to urate.


ensembl_gene_id: Q6AV34
symbol: ARGC_ORYSJ
gene_biotype: protein_coding
description:
  Probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplastic; Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: Q6AVA8
symbol: PPDK1
gene_biotype: protein_coding
description:
  Pyruvate, phosphate dikinase 1, chloroplastic; Formation of phosphoenolpyruvate. The cytoplasmic isoform supports the biosynthetic processes in the nascent endosperm and provides an efficient mechanism for glycolytic ATP synthesis in oxygen depleted tissues. May be involved in regulating the flux of carbon into starch and fatty acids of seeds and in the remobilization of nitrogen reserves in senescing leaves; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: Q6AVD0
symbol: YSL3
gene_biotype: protein_coding
description:
  Probable metal-nicotianamine transporter YSL3; May be involved in the transport of nicotianamine-chelated metals; Belongs to the YSL (TC 2.A.67.2) family.


ensembl_gene_id: Q6AVG6
symbol: ISPH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic; Enzyme of the plastid non-mevalonate pathway for isoprenoid biosynthesis that converts 1-hydroxy-2-methyl-2-(E)-butenyl 4- diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Is essential for chloroplast development.


ensembl_gene_id: Q6AVI0
symbol: OsJ_12466
gene_biotype: protein_coding
description:
  Zinc finger BED domain-containing protein RICESLEEPER 2; Transposase-like protein that is essential for plant growth and development. May regulate global gene expression by recruiting other cellular factors.


ensembl_gene_id: Q6AVI1
symbol: GIF1
gene_biotype: protein_coding
description:
  GRF-interacting factor 1; Transcription coactivator that plays a role in the regulation of meristematic function in leaves, stems and inflorescences. May regulate leaf size, length of stem internodes, and seed size by promoting cell expansion  (Probable). Transcription coactivator that plays a role in the regulation of grain size. Component of a network formed by the microRNA396 (miRNA396), the GRFs and their interacting factors (GIFs) acting in the regulation of meristem function, at least partially through the control of cell proliferation (Probable). Component of the miRNA396c-GRF4- [...]


ensembl_gene_id: Q6AVI8
symbol: CPK9
gene_biotype: protein_coding
description:
  Calcium-dependent protein kinase 9; May play a role in signal transduction pathways that involve calcium as a second messenger (By similarity). Functions in signal transduction pathways that positively regulate responses to drought, osmotic, and dehydration stress. Regulates expression of stress- associated genes in response to drought. Involved in tolerance to drought stress by increasing proline and soluble sugars, and improving stomatal closure. Required for pollen maturation and spikelet fertility.


ensembl_gene_id: Q6AVM3
symbol: CCAMK
gene_biotype: protein_coding
description:
  Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase; Calcium- and calmodulin-dependent protein kinase required for arbuscular mycorrhizal (AM) symbiosis. Involved in response to water deprivation stress. Required for abscisic acid-induced antioxidant defense and oxidative stress tolerance during dehydration stress. Functions upstream of MPK1 in an abscisic acid signaling pathway that regulates the activities of antioxidant enzymes and the production of hydrogen peroxide. Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. CaMK subfamily.


ensembl_gene_id: Q6AVN2
symbol: SIRP1
gene_biotype: protein_coding
description:
  E3 ubiquitin-protein ligase SIRP1; Possesses E3 ubiqutin-protein ligase activity in vitro. Acts as negative regulator of salinity stress tolerance mediated by the ubiquitin-proteasome degradation pathway.


ensembl_gene_id: Q6AVQ3
symbol: Q6AVQ3_ORYSJ
gene_biotype: protein_coding
description:
  Shaggy-related protein kinase kappa, putative, expressed; Belongs to the protein kinase superfamily.


ensembl_gene_id: Q6AVS9
symbol: Q6AVS9_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J013110F19, full insert sequence; Belongs to the mitochondrial carrier (TC 2.A.29) family.


ensembl_gene_id: Q6AVT2
symbol: AGPL1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic/amyloplastic; Involved in synthesis of starch. Catalyzes the synthesis of ADP-glucose, a molecule that serves as an activated glycosyl donor for alpha-1,4-glucan synthesis. Essential for starch synthesis in leaf chloroplasts and endosperm amyloplasts; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: Q6AVZ9
symbol: OsJ_17019
gene_biotype: protein_coding
description:
  Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog; Putative RNA polymerase II subunit B1 C-terminal domain (CTD) phosphatase involved in RNA polymerase II transcription regulation. Belongs to the RPAP2 family.


ensembl_gene_id: Q6AWX7
symbol: GRF12
gene_biotype: protein_coding
description:
  Growth-regulating factor 12; Transcription activator that plays a regulatory role in gibberellin-induced stem elongation.


ensembl_gene_id: Q6AWX8
symbol: GRF11
gene_biotype: protein_coding
description:
  Growth-regulating factor 11; Transcription activator that plays a regulatory role in gibberellin-induced stem elongation.


ensembl_gene_id: Q6AWY1
symbol: GRF8
gene_biotype: protein_coding
description:
  Growth-regulating factor 8; Transcription activator that plays a regulatory role in gibberellin-induced stem elongation.


ensembl_gene_id: Q6AWY2
symbol: GRF7
gene_biotype: protein_coding
description:
  Growth-regulating factor 7; Transcription activator that plays a regulatory role in gibberellin-induced stem elongation.


ensembl_gene_id: Q6AWY3
symbol: GRF6
gene_biotype: protein_coding
description:
  Growth-regulating factor 6; Transcription activator that plays a regulatory role in gibberellin-induced stem elongation.


ensembl_gene_id: Q6AWY4
symbol: GRF5
gene_biotype: protein_coding
description:
  Growth-regulating factor 5; Transcription activator that plays a regulatory role in gibberellin-induced stem elongation.


ensembl_gene_id: Q6AWY6
symbol: GRF3
gene_biotype: protein_coding
description:
  Growth-regulating factor 3; Transcription activator that plays a regulatory role in gibberellin-induced stem elongation.


ensembl_gene_id: Q6AWY7
symbol: GRF2
gene_biotype: protein_coding
description:
  Growth-regulating factor 2; Transcription activator that plays a regulatory role in gibberellin-induced stem elongation.


ensembl_gene_id: Q6AWY8
symbol: GRF1
gene_biotype: protein_coding
description:
  Growth-regulating factor 1; Transcription activator that plays a regulatory role in gibberellin-induced stem elongation.


ensembl_gene_id: Q6BDZ9
symbol: KSL8
gene_biotype: protein_coding
description:
  Stemar-13-ene synthase; Catalyzes the conversion of syn-copalyl diphosphate to the phytoalexin precursor stemarene; Belongs to the terpene synthase family.


ensembl_gene_id: Q6EN42
symbol: PYL3
gene_biotype: protein_coding
description:
  Abscisic acid receptor PYL3; Involved in abscisic acid (ABA) signaling during seed germination and abiotic stress response. Acts as positive regulator of ABA-mediated inhibition of seed germination, and tolerance to drought and cold stresses. Together with PP2C50 and SAPK10, may form an ABA signaling module involved in stress response. Inhibits the protein phosphatases PP2C06 and PP2C09 when activated by abscisic acid (ABA).


ensembl_gene_id: Q6EN45
symbol: PP2C13
gene_biotype: protein_coding
description:
  Probable protein phosphatase 2C member 13, mitochondrial; Probable protein phosphatase that may play a role as a mitochondrial signal transduction mediator in pollen germination. May function in retrograde signaling from the mitochondria to the nucleus. May be a downstream factor of cytoplasmic male sterility (CMS). CMS is caused by genetic incompatibility between nuclei and mitochondria within male reproductive organs; Belongs to the PP2C family.


ensembl_gene_id: Q6ENK5
symbol: Q6ENK5_ORYSJ
gene_biotype: protein_coding
description:
  Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.


ensembl_gene_id: Q6EP31
symbol: RAC5
gene_biotype: protein_coding
description:
  Rac-like GTP-binding protein 5; Inactive GDP-bound Rho GTPases reside in the cytosol, are found in a complex with Rho GDP-dissociation inhibitors (Rho GDIs), and are released from the GDI protein in order to translocate to membranes upon activation.


ensembl_gene_id: Q6EP58
symbol: B1267B06.3
gene_biotype: protein_coding
description:
  Casparian strip membrane protein 7; Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion (By similarity).


ensembl_gene_id: Q6EP77
symbol: DREB1G
gene_biotype: protein_coding
description:
  Dehydration-responsive element-binding protein 1G; Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription (By similarity). Belongs to the AP2/ERF transcription factor family. ERF subfamily.


ensembl_gene_id: Q6EPF0
symbol: ROC5
gene_biotype: protein_coding
description:
  Homeobox-leucine zipper protein ROC5; Probable transcription factor; Belongs to the HD-ZIP homeobox family. Class IV subfamily.


ensembl_gene_id: Q6EPG8
symbol: ASMT1
gene_biotype: protein_coding
description:
  Acetylserotonin O-methyltransferase 1; Methyltransferase which catalyzes the transfer of a methyl group onto N-acetylserotonin, producing melatonin (N-acetyl-5- methoxytryptamine). Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.


ensembl_gene_id: Q6EPN6
symbol: ISPF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic; Enzyme of the plastid non-mevalonate pathway for isoprenoid biosynthesis that converts 4-diphosphocytidyl-2C-methyl-D-erythritol 2- phosphate into 2C-methyl-D-erythritol 2,4-cyclodiphosphate and CMP (Probable). Also converts 4-diphosphocytidyl-2C-methyl-D-erythritol into 2C-methyl-D-erythritol 3,4-cyclophosphate and CMP (Probable). Is essential for chloroplast development. Belongs to the IspF family.


ensembl_gene_id: Q6EPN8
symbol: FACE1
gene_biotype: protein_coding
description:
  CAAX prenyl protease 1 homolog; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.


ensembl_gene_id: Q6EPP9
symbol: GRF10
gene_biotype: protein_coding
description:
  Growth-regulating factor 10; Transcription activator that plays a regulatory role in gibberellin-induced stem elongation.


ensembl_gene_id: Q6EPW7
symbol: RAR1
gene_biotype: protein_coding
description:
  Cysteine and histidine-rich domain-containing protein RAR1; Involved in basal disease resistance to virulent strain of bacterial blight (X.oryzae) and compatible race of rice blast fungus (M.grisea). May act as positive regulator of basal defense. Associates with HSP90 and is essential for the pathogen-associated molecular pattern (PAMP)-triggered immune responses specifically enhanced by RAC1.


ensembl_gene_id: Q6EPZ0
symbol: WRKY62
gene_biotype: protein_coding
description:
  WRKY transcription factor WRKY62; Transcription repressor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Regulates, probably indirectly, the activation of defense-related genes during defense response (By similarity). Regulates negatively basal innate immunity and XA21-mediated defense against X.oryzae pv. oryzae (Xoo). Belongs to the WRKY group II-a family.


ensembl_gene_id: Q6EPZ2
symbol: WRKY76
gene_biotype: protein_coding
description:
  WRKY transcription factor WRKY76; Transcription repressor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Regulates, probably indirectly, the activation of defense-related genes during defense response (By similarity). Modulates plant innate immunity against X.oryzae pv. oryzae (Xoo) ; Belongs to the WRKY group II-a family.


ensembl_gene_id: Q6EQ07
symbol: Q6EQ07_ORYSJ
gene_biotype: protein_coding
description:
  Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.


ensembl_gene_id: Q6EQ14
symbol: Q6EQ14_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J013037F14, full insert sequence; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: Q6EQ60
symbol: ABCG47
gene_biotype: protein_coding
description:
  ABC transporter G family member 47; May be a general defense protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.


ensembl_gene_id: Q6EQG2
symbol: NADHK_ORYSJ
gene_biotype: protein_coding
description:
  Probable NADH kinase; Key source of the cellular reductant NADPH which is an important antioxidant factor.


ensembl_gene_id: Q6EQW4
symbol: Q6EQW4_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J033121G21, full insert sequence; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: Q6ER94
symbol: BAS1
gene_biotype: protein_coding
description:
  2-Cys peroxiredoxin BAS1, chloroplastic; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. May be an antioxidant enzyme particularly in the developing shoot and photosynthesizing leaf (By similarity); Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.


ensembl_gene_id: Q6ERE5
symbol: VIT2
gene_biotype: protein_coding
description:
  Vacuolar iron transporter 2; Vacuolar iron transporter involved in the transfer of iron ions from the cytosol to the vacuole for intracellular iron storage. Vacuolar iron storage is required for seed embryo and seedling development (Probable). May be involved in the regulation of iron translocation between flag leaves and seeds (Probable). Can transport zinc ions from the cytosol to the vacuole. Belongs to the CCC1 family.


ensembl_gene_id: Q6ERS0
symbol: CIPK27
gene_biotype: protein_coding
description:
  Putative CBL-interacting protein kinase 27; CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity).


ensembl_gene_id: Q6ERS4
symbol: CIPK16
gene_biotype: protein_coding
description:
  CBL-interacting protein kinase 16; CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity); Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.


ensembl_gene_id: Q6ERU3
symbol: GLUB5
gene_biotype: protein_coding
description:
  Glutelin type-B 5 acidic chain; Seed storage protein; Belongs to the 11S seed storage protein (globulins) family.


ensembl_gene_id: Q6ERW5
symbol: CAD8D
gene_biotype: protein_coding
description:
  Probable cinnamyl alcohol dehydrogenase 8D; Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers. Catalyzes the NADPH- dependent reduction of coniferaldehyde, 5-hydroxyconiferaldehyde, sinapaldehyde, 4-coumaraldehyde and caffeyl aldehyde to their respective alcohols.


ensembl_gene_id: Q6ERW7
symbol: CAD8C
gene_biotype: protein_coding
description:
  Probable cinnamyl alcohol dehydrogenase 8C; Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers. Catalyzes the NADPH- dependent reduction of coniferaldehyde, 5-hydroxyconiferaldehyde, sinapaldehyde, 4-coumaraldehyde and caffeyl aldehyde to their respective alcohols; Belongs to the zinc-containing alcohol dehydrogenase family.


ensembl_gene_id: Q6ERW9
symbol: CAD8B
gene_biotype: protein_coding
description:
  Probable cinnamyl alcohol dehydrogenase 8B; Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers. Catalyzes the NADPH- dependent reduction of coniferaldehyde, 5-hydroxyconiferaldehyde, sinapaldehyde, 4-coumaraldehyde and caffeyl aldehyde to their respective alcohols.


ensembl_gene_id: Q6ERX1
symbol: CAD8A
gene_biotype: protein_coding
description:
  Probable cinnamyl alcohol dehydrogenase 8A; Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers. Catalyzes the NADPH- dependent reduction of coniferaldehyde, 5-hydroxyconiferaldehyde, sinapaldehyde, 4-coumaraldehyde and caffeyl aldehyde to their respective alcohols.


ensembl_gene_id: Q6ES10
symbol: HATB
gene_biotype: protein_coding
description:
  Probable histone acetyltransferase type B catalytic subunit; Acetylates soluble but not nucleosomal H4.


ensembl_gene_id: Q6ES21
symbol: Q6ES21_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J013034J09, full insert sequence; Belongs to the iron/ascorbate-dependent oxidoreductase family.


ensembl_gene_id: Q6ES52
symbol: P0650H04.34
gene_biotype: protein_coding
description:
  TPR repeat-containing thioredoxin TDX; Probable thiol-disulfide oxidoreductase that may participate in various redox reactions and act as chaperone under heat shock. May interact with HSP70 proteins through the TPR repeats (By similarity).


ensembl_gene_id: Q6ESF0
symbol: P0605D08.24
gene_biotype: protein_coding
description:
  Germin-like protein 2-4; May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.


ensembl_gene_id: Q6ESG1
symbol: BASS4
gene_biotype: protein_coding
description:
  Probable sodium/metabolite cotransporter BASS4, chloroplastic; May function as sodium-coupled metabolite transporter across the chloroplast envelope; Belongs to the bile acid:sodium symporter (BASS) (TC 2.A.28) family.


ensembl_gene_id: Q6ESI7
symbol: TPP2
gene_biotype: protein_coding
description:
  Tripeptidyl-peptidase 2; Serine protease that may function in the proteasome pathway. Belongs to the peptidase S8 family.


ensembl_gene_id: Q6ESZ9
symbol: SDC1
gene_biotype: protein_coding
description:
  Serine decarboxylase 1; Catalyzes the biosynthesis of ethanolamine from serine. Decarboxylation of free serine is the major source of ethanolamine production in plants and ethanolamine metabolism is crucial for the synthesis of choline, phosphatidylethanolamine (PE) and phosphatidylcholine (PC), and thus for plant growth (By similarity).


ensembl_gene_id: Q6ET36
symbol: CPS1
gene_biotype: protein_coding
description:
  Ent-copalyl diphosphate synthase 1, chloroplastic; Catalyzes the conversion of geranylgeranyl diphosphate to the gibberellin precursor ent-copalyl diphosphate. Belongs to the terpene synthase family.


ensembl_gene_id: Q6ET46
symbol: Q6ET46_ORYSJ
gene_biotype: protein_coding
description:
  Os02g0158100 protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.


ensembl_gene_id: Q6ETK9
symbol: ADIPOR2
gene_biotype: protein_coding
description:
  Heptahelical transmembrane protein ADIPOR2; May play a role in abiotic stress response; Belongs to the ADIPOR family.


ensembl_gene_id: Q6ETL8
symbol: GL1-2
gene_biotype: protein_coding
description:
  Very-long-chain aldehyde decarbonylase GL1-2; Aldehyde decarbonylase involved in the conversion of aldehydes to alkanes. Core component of a very-long-chain alkane synthesis complex (By similarity). Required for the formation of wax layers conferring cuticular permeability and drought tolerance.


ensembl_gene_id: Q6ETS8
symbol: Q6ETS8_ORYSJ
gene_biotype: protein_coding
description:
  Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family.


ensembl_gene_id: Q6ETX0
symbol: RISBZ3
gene_biotype: protein_coding
description:
  bZIP transcription factor RISBZ3; Transcriptional activator that possesses broad binding specificity for DNA promoter elements with the core sequence 5'-ACGT- 3'. May be involved in the regulation of genes expressed during seed development. Binds to the DNA specific sequence 5'- TGAGTCA-3' found in seed storage protein gene promoters.


ensembl_gene_id: Q6ETX3
symbol: Q6ETX3_ORYSJ
gene_biotype: protein_coding
description:
  U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.


ensembl_gene_id: Q6EU10
symbol: OJ1197_E09.7
gene_biotype: protein_coding
description:
  Probable N6-adenosine-methyltransferase MT-A70-like; Probable N6-methyltransferase that methylates adenosine residues of some mRNAs. N6-methyladenosine (m6A), which is present at internal sites of some mRNAs, may play a role in the efficiency of mRNA splicing, transport or translation (By similarity).


ensembl_gene_id: Q6EU14
symbol: AGO1A
gene_biotype: protein_coding
description:
  Protein argonaute 1A; Probably involved in the RNA silencing pathway. May bind to short RNAs such as microRNAs (miRNAs) or short interfering RNAs (siRNAs), and represses the translation of mRNAs which are complementary to them (By similarity).


ensembl_gene_id: Q6EU39
symbol: MADS6
gene_biotype: protein_coding
description:
  MADS-box transcription factor 6; Probable transcription factor. Regulates floral organ identity and floral meristem determinacy. May be involved in the control of flowering time.


ensembl_gene_id: Q6EU49
symbol: WNK4
gene_biotype: protein_coding
description:
  Probable serine/threonine-protein kinase WNK4; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. WNK subfamily.


ensembl_gene_id: Q6EU94
symbol: PIP1-1
gene_biotype: protein_coding
description:
  Aquaporin PIP1-1; May function as water channel to facilitate the transport of water across cell membrane; Belongs to the MIP/aquaporin (TC 1.A.8) family. PIP (TC 1.A.8.11) subfamily.


ensembl_gene_id: Q6EUG4
symbol: HSFC2A
gene_biotype: protein_coding
description:
  Heat stress transcription factor C-2a; Transcriptional regulator that specifically binds DNA of heat shock promoter elements (HSE).


ensembl_gene_id: Q6EUH7
symbol: ADF1
gene_biotype: protein_coding
description:
  Actin-depolymerizing factor 1; Actin-depolymerizing protein. Severs actin filaments (F- actin) and binds to actin monomers (By similarity).


ensembl_gene_id: Q6EUN0
symbol: OJ1115_A05.19
gene_biotype: protein_coding
description:
  ASC1-like protein 1; Mediates resistance to sphinganine-analog mycotoxins (SAMs) by restoring the sphingolipid biosynthesis. Could salvage the transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi apparatus in ceramides-depleted cells after SAM exposure (By similarity).


ensembl_gene_id: Q6EUP4
symbol: GF14E
gene_biotype: protein_coding
description:
  14-3-3-like protein GF14-E; Is associated with a DNA binding complex that binds to the G box, a well-characterized cis-acting DNA regulatory element found in plant genes; Belongs to the 14-3-3 family.


ensembl_gene_id: Q6EUQ7
symbol: Q6EUQ7_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J023061G23, full insert sequence; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: Q6EUS5
symbol: C68
gene_biotype: protein_coding
description:
  cDNA clone:J013129G20, full insert sequence; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q6EX42
symbol: PIPK1
gene_biotype: protein_coding
description:
  Phosphatidylinositol 4-phosphate 5-kinase 1; Involved in flowering. May suppress floral initiation by modifying the expression of genes related to floral induction.


ensembl_gene_id: Q6F2Y7
symbol: CLPB1
gene_biotype: protein_coding
description:
  Chaperone protein ClpB1; Molecular chaperone involved in heat stress response. May play a role in resolubilization of protein aggregates after heat shock. Belongs to the ClpA/ClpB family.


ensembl_gene_id: Q6F2Z1
symbol: STT3A
gene_biotype: protein_coding
description:
  Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A; Catalytic subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation [...]


ensembl_gene_id: Q6F2Z7
symbol: Q6F2Z7_ORYSJ
gene_biotype: protein_coding
description:
  GATA transcription factor; Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. Belongs to the type IV zinc-finger family. Class A subfamily.


ensembl_gene_id: Q6F303
symbol: PHP5
gene_biotype: protein_coding
description:
  Pseudo histidine-containing phosphotransfer protein 5; Functions as two-component phosphorelay mediators between cytokinin sensor histidine kinases and response regulators (B-type ARRs). Plays an important role in propagating cytokinin signal transduction.


ensembl_gene_id: Q6F321
symbol: Q6F321_ORYSJ
gene_biotype: protein_coding
description:
  Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.


ensembl_gene_id: Q6F332
symbol: CAM2
gene_biotype: protein_coding
description:
  Calmodulin-2; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.


ensembl_gene_id: Q6F353
symbol: OJ1384_A02.2
gene_biotype: protein_coding
description:
  DNA replication licensing factor MCM6; Probable component of the MCM2-7 complex (MCM complex) that may function as a DNA helicase and which is essential to undergo a single round of replication initiation and elongation per cell cycle in eukaryotic cells.


ensembl_gene_id: Q6F357
symbol: OJ1268_B08.4
gene_biotype: protein_coding
description:
  Phospholipase A1-II 7; Acylhydrolase that catalyzes the hydrolysis of phospholipids at the sn-1 position; Belongs to the AB hydrolase superfamily. Lipase family.


ensembl_gene_id: Q6F358
symbol: OJ1268_B08.3
gene_biotype: protein_coding
description:
  Phospholipase A1-II 6; Acylhydrolase that catalyzes the hydrolysis of phospholipids at the sn-1 position; Belongs to the AB hydrolase superfamily. Lipase family.


ensembl_gene_id: Q6F362
symbol: H2B.9
gene_biotype: protein_coding
description:
  Histone H2B.9; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.


ensembl_gene_id: Q6F388
symbol: HSFA2E
gene_biotype: protein_coding
description:
  Heat stress transcription factor A-2e; Transcriptional activator expressed upon environmental stress that specifically binds DNA of heat shock promoter elements (HSE). Involved in heat stress response; Belongs to the HSF family. Class A subfamily.


ensembl_gene_id: Q6F3A6
symbol: CPK10
gene_biotype: protein_coding
description:
  Calcium-dependent protein kinase 10; May play a role in signal transduction pathways that involve calcium as a second messenger; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.


ensembl_gene_id: Q6F4F5
symbol: CYP724B1
gene_biotype: protein_coding
description:
  Cytochrome P450 724B1; Involved in brassinosteroid biosynthesis. May catalyze a C6- oxidation step and may be involved to supply 6-deoxotyphasterol and typhasterol. Involved in internode elongation and seed development.


ensembl_gene_id: Q6F4N5
symbol: AP25
gene_biotype: protein_coding
description:
  Aspartyl protease 25; Anther-specific aspartic protease involved in tapetal programmed cell death (PCD). Directly regulated by the transcription factor EAT1/DTD in anthers during tapetum PCD and degeneration. Belongs to the peptidase A1 family.


ensembl_gene_id: Q6F6A2
symbol: PHR
gene_biotype: protein_coding
description:
  Deoxyribodipyrimidine photo-lyase; Involved in repair of UV radiation-induced DNA damage. Catalyzes the light-dependent monomerization (300-600 nm) of cyclobutylpyrimidine dimers (CPDs), which are formed between adjacent bases on the same DNA strand upon exposure to ultraviolet radiation. Required for plant survival in the presence of UV-B light. Not involved in the repair of (6-4) photoproducts. Belongs to the DNA photolyase class-2 family.


ensembl_gene_id: Q6H3Z3
symbol: YSL15
gene_biotype: protein_coding
description:
  Iron-phytosiderophore transporter YSL15; Involved in Fe(3+) uptake from the rhizosphere and phloem transport of iron. Plays an important role in iron homeostasis during the early stages of growth. Transports Fe(3+)-phytosiderophore, but not Fe(3+)- or Fe(2+)-nicotianamine. May not transport other chelated metals.


ensembl_gene_id: Q6H3Z6
symbol: YSL2
gene_biotype: protein_coding
description:
  Metal-nicotianamine transporter YSL2; Involved in the phloem transport of iron and manganese and their translocation into the grain. Transports iron- and manganese- nicotianamine chelates, but not iron-phytosiderophore.


ensembl_gene_id: Q6H432
symbol: Q6H432_ORYSJ
gene_biotype: protein_coding
description:
  Meiotic nuclear division protein 1 homolog; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis. Belongs to the MND1 family.


ensembl_gene_id: Q6H442
symbol: TOP6B
gene_biotype: protein_coding
description:
  DNA topoisomerase 6 subunit B; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. The B subunit binds ATP (By similarity); Belongs to the TOP6B family.


ensembl_gene_id: Q6H468
symbol: RR11
gene_biotype: protein_coding
description:
  Two-component response regulator ORR11; Functions as response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Type-A response regulators seem to act as negative regulators of the cytokinin signaling. Belongs to the ARR family. Type-A subfamily.


ensembl_gene_id: Q6H4D6
symbol: SKP5
gene_biotype: protein_coding
description:
  SKP1-like protein 5; Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, a RING-box and a F- box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends on the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1; Belongs to the SKP1 family.


ensembl_gene_id: Q6H4G3
symbol: SDH2-2
gene_biotype: protein_coding
description:
  Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).


ensembl_gene_id: Q6H4L9
symbol: HAK20
gene_biotype: protein_coding
description:
  Potassium transporter 20; High-affinity potassium transporter; Belongs to the HAK/KUP transporter (TC 2.A.72.3) family.


ensembl_gene_id: Q6H4M2
symbol: HAK19
gene_biotype: protein_coding
description:
  Potassium transporter 19; High-affinity potassium transporter; Belongs to the HAK/KUP transporter (TC 2.A.72.3) family.


ensembl_gene_id: Q6H4M9
symbol: Q6H4M9_ORYSJ
gene_biotype: protein_coding
description:
  Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: Q6H4N0
symbol: GT21_ORYSJ
gene_biotype: protein_coding
description:
  Probable glucuronosyltransferase Os02g0520750; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls; Belongs to the glycosyltransferase 47 family.


ensembl_gene_id: Q6H4P7
symbol: Q6H4P7_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J013169D12, full insert sequence; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: Q6H4R6
symbol: HAK23
gene_biotype: protein_coding
description:
  Potassium transporter 23; High-affinity potassium transporter; Belongs to the HAK/KUP transporter (TC 2.A.72.3) family.


ensembl_gene_id: Q6H4T6
symbol: Q6H4T6_ORYSJ
gene_biotype: protein_coding
description:
  Os09g0268300 protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: Q6H500
symbol: RISBZ4
gene_biotype: protein_coding
description:
  bZIP transcription factor RISBZ4; Probable transcription factor that binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters.


ensembl_gene_id: Q6H501
symbol: HKT6
gene_biotype: protein_coding
description:
  Probable cation transporter HKT6; Probable cation transporter. May be involved in regulation of K(+)/Na(+) homeostasis; Belongs to the TrkH potassium transport family. HKT (TC 2.A.38.3) subfamily.


ensembl_gene_id: Q6H509
symbol: SPL4
gene_biotype: protein_coding
description:
  Squamosa promoter-binding-like protein 4; Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May be involved in panicle development.


ensembl_gene_id: Q6H536
symbol: Q6H536_ORYSJ
gene_biotype: protein_coding
description:
  Tonoplast monosaccharide transporter 2; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: Q6H543
symbol: IAA7
gene_biotype: protein_coding
description:
  Auxin-responsive protein IAA7; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.


ensembl_gene_id: Q6H545
symbol: IPK2
gene_biotype: protein_coding
description:
  Inositol polyphosphate multikinase IPK2; Inositol phosphate kinase with a broad substrate specificity. Phosphorylates inositol 1,4,5-trisphosphate (Ins(1,4,5)P3), inositol 1,4,5,6-tetrakisphosphate (Ins(1,4,5,6)P4), inositol 1,3,4,5- tetrakisphosphate (Ins(1,3,4,5)P4), inositol 1,3,4,6-tetrakisphosphate (Ins(1,3,4,6)P4) and inositol 1,2,3,4,6-pentakisphosphate (Ins(1,2,3,4,6)P5) but not inositol 1,4-bisphosphate (Ins(1,4)P2), inositol 1,3,4-trisphosphate (Ins(1,3,4)P3), inositol 1,2,6- trisphosphate (Ins(1,2,6)P3), inositol 3,4,5,6-tetrakisphosphate (Ins(3,4,5,6)P4), inositol 1,3,4,5,6 [...]


ensembl_gene_id: Q6H547
symbol: Q6H547_ORYSJ
gene_biotype: protein_coding
description:
  Ribonuclease; Cytoprotective ribonuclease (RNase) required for resistance to abiotic stresses, acting as a positive regulator of mRNA decapping during stress.


ensembl_gene_id: Q6H595
symbol: SAP17
gene_biotype: protein_coding
description:
  Zinc finger AN1 domain-containing stress-associated protein 17; May be involved in environmental stress response.


ensembl_gene_id: Q6H5J0
symbol: P0701E06.10
gene_biotype: protein_coding
description:
  Enoyl-[acyl-carrier-protein] reductase [NADH] 2, chloroplastic; Catalyzes the NAD-dependent reduction of a carbon-carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP). Catalyzes the last reduction step in the de novo synthesis cycle of fatty acids. Involved in the elongation cycle of fatty acids which are used in lipid metabolism. Required for normal plant growth (By similarity).


ensembl_gene_id: Q6H5L4
symbol: TPP7
gene_biotype: protein_coding
description:
  Probable trehalose-phosphate phosphatase 7; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. Trehalose accumulation in plant may improve abiotic stress tolerance (By similarity).


ensembl_gene_id: Q6H5U3
symbol: OsJ_07673
gene_biotype: protein_coding
description:
  Sphingolipid delta(4)-desaturase DES1-like; Sphingolipid-delta-4-desaturase required for the biosynthesis of delta-4-unsaturated sphingolipids and derivatives.


ensembl_gene_id: Q6H5Y7
symbol: Q6H5Y7_ORYSJ
gene_biotype: protein_coding
description:
  cDNA, clone: J100074L11, full insert sequence; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q6H612
symbol: PRIN2
gene_biotype: protein_coding
description:
  Protein PLASTID REDOX INSENSITIVE 2, chloroplastic; Required for the activity of the plastid-encoded RNA polymerase (PEP) and full expression of genes transcribed by PEP.


ensembl_gene_id: Q6H628
symbol: GRXS6
gene_biotype: protein_coding
description:
  Monothiol glutaredoxin-S6; May only reduce GSH-thiol disulfides, but not protein disulfides; Belongs to the glutaredoxin family. CPYC subfamily.


ensembl_gene_id: Q6H638
symbol: KIN7C
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-7C; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-7 subfamily.


ensembl_gene_id: Q6H641
symbol: MHX2
gene_biotype: protein_coding
description:
  Magnesium/proton exchanger 2; Vacuolar transporter that exchanges protons with Mg(2+), Zn(2+) and Fe(2+) ions. May control the partitioning of Mg(2+) and Zn(2+) between plant organs (By similarity); Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. MHX subfamily.


ensembl_gene_id: Q6H647
symbol: KIN7B
gene_biotype: protein_coding
description:
  Putative inactive kinesin-like protein KIN-7B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-7 subfamily.


ensembl_gene_id: Q6H658
symbol: OJ1282_H11.20
gene_biotype: protein_coding
description:
  Vacuolar iron transporter homolog 1; Probable vacuolar iron transporter that may be involved in the regulation of iron distribution throughout the plant. Belongs to the CCC1 family.


ensembl_gene_id: Q6H676
symbol: EXPB11
gene_biotype: protein_coding
description:
  Expansin-B11; May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity).


ensembl_gene_id: Q6H677
symbol: EXPB14
gene_biotype: protein_coding
description:
  Putative expansin-B14; May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity); Belongs to the expansin family. Expansin B subfamily.


ensembl_gene_id: Q6H6C3
symbol: AGO17
gene_biotype: protein_coding
description:
  Protein argonaute 17; Probably involved in the RNA silencing pathway. May bind to short RNAs such as microRNAs (miRNAs) or short interfering RNAs (siRNAs), and represses the translation of mRNAs which are complementary to them (By similarity).


ensembl_gene_id: Q6H6D2
symbol: HEMC
gene_biotype: protein_coding
description:
  Porphobilinogen deaminase, chloroplastic; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps; Belongs to the HMBS family.


ensembl_gene_id: Q6H6J7
symbol: Q6H6J7_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J033108J17, full insert sequence; Belongs to the peroxisomal membrane protein PXMP2/4 family.


ensembl_gene_id: Q6H6N5
symbol: NIN3
gene_biotype: protein_coding
description:
  Neutral/alkaline invertase 3, chloroplastic; Mitochondrial invertase that cleaves sucrose into glucose and fructose.


ensembl_gene_id: Q6H6P0
symbol: ATG8E
gene_biotype: protein_coding
description:
  Putative autophagy-related protein 8E; Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton; Belongs to the ATG8 family.


ensembl_gene_id: Q6H6Q7
symbol: HSFA3
gene_biotype: protein_coding
description:
  Heat stress transcription factor A-3; Transcriptional regulator that specifically binds DNA of heat shock promoter elements (HSE).


ensembl_gene_id: Q6H6R9
symbol: FTSH7
gene_biotype: protein_coding
description:
  ATP-dependent zinc metalloprotease FTSH 7, chloroplastic; Probable ATP-dependent zinc metallopeptidase; In the C-terminal section; belongs to the peptidase M41 family.


ensembl_gene_id: Q6H6S3
symbol: HOX24
gene_biotype: protein_coding
description:
  Homeobox-leucine zipper protein HOX24; Probable transcription factor; Belongs to the HD-ZIP homeobox family. Class I subfamily.


ensembl_gene_id: Q6H6V4
symbol: ARF6
gene_biotype: protein_coding
description:
  Auxin response factor 6; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).


ensembl_gene_id: Q6H754
symbol: SAP5
gene_biotype: protein_coding
description:
  Zinc finger A20 and AN1 domain-containing stress-associated protein 5; May be involved in environmental stress response.


ensembl_gene_id: Q6H764
symbol: Q6H764_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J023042A15, full insert sequence; Belongs to the eukaryotic ribosomal protein P1/P2 family.


ensembl_gene_id: Q6H765
symbol: GT2
gene_biotype: protein_coding
description:
  Probable glycosyltransferase 2; Probable glycosyltransferase that may be involved in the biosynthesis of xyloglucan.


ensembl_gene_id: Q6H795
symbol: CLPD1
gene_biotype: protein_coding
description:
  Chaperone protein ClpD1, chloroplastic; Molecular chaperone that may function in heat stress response. May interact with a ClpP-like protease involved in degradation of denatured proteins in the chloroplast. Chaperone involved in response to abiotic stresses. Plays a positive role during dehydration and salt stress.


ensembl_gene_id: Q6H7C9
symbol: Q6H7C9_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:006-304-D09, full insert sequence; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Q6H7D2
symbol: SIT1
gene_biotype: protein_coding
description:
  L-type lectin-domain containing receptor kinase SIT1; Lectin-domain containing receptor kinase involved in salt stress response. Acts as negative regulator of salt tolerance. Mediates salt sensitivity by phosphorylating and activating MPK3 and MPK6. Promotes ethylene production and mediates salt-induced ethylene signaling. Promotes the accumulation of reactive oxygen species (ROS) under salt stress conditions. Its kinase activity is triggered by salt stress and is required for its function in salt stress response. Phosphorylates B'KAPPA, a B regulatory subunit of phosphatase 2A (PP2A)  [...]


ensembl_gene_id: Q6H7E4
symbol: OsJ_07676
gene_biotype: protein_coding
description:
  Thioredoxin M1, chloroplastic; Probable thiol-disulfide oxidoreductase that may be involved in the redox regulation of chloroplastic enzymes; Belongs to the thioredoxin family. Plant M-type subfamily.


ensembl_gene_id: Q6H7J5
symbol: RPA2B
gene_biotype: protein_coding
description:
  Replication protein A 32 kDa subunit B; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions (By similarity).


ensembl_gene_id: Q6H7J6
symbol: YSL14
gene_biotype: protein_coding
description:
  Probable metal-nicotianamine transporter YSL14; May be involved in the transport of nicotianamine-chelated metals.


ensembl_gene_id: Q6H7M1
symbol: FAH
gene_biotype: protein_coding
description:
  Fumarylacetoacetase; Converts fumarylacetoacetate to acetoacetate and fumarate. Involved in tyrosine catabolic pathway. Catalyzes the final step in the tyrosine degradation pathway.


ensembl_gene_id: Q6H7M3
symbol: HMA4
gene_biotype: protein_coding
description:
  Copper-transporting ATPase HMA4; Copper (Cu) transporter that mediates Cu transport in root vacuoles. Involved in Cu detoxification by sequestrating Cu into root vacuoles and limiting translocation of Cu from the roots to the shoots, and accumulation in grains.


ensembl_gene_id: Q6H7P8
symbol: SAP4
gene_biotype: protein_coding
description:
  Zinc finger A20 and AN1 domain-containing stress-associated protein 4; May be involved in environmental stress response.


ensembl_gene_id: Q6H7S2
symbol: OJ1112_G03.6-1
gene_biotype: protein_coding
description:
  DEAD-box ATP-dependent RNA helicase 8; ATP-dependent RNA helicase involved in mRNA turnover, and more specifically in mRNA decapping.


ensembl_gene_id: Q6H7T1
symbol: Q6H7T1_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:001-008-D11, full insert sequence; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: Q6H7U5
symbol: CIPK26
gene_biotype: protein_coding
description:
  CBL-interacting protein kinase 26; CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity).


ensembl_gene_id: Q6H7U6
symbol: Q6H7U6_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:002-172-F02, full insert sequence; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: Q6H805
symbol: RR24
gene_biotype: protein_coding
description:
  Two-component response regulator ORR24; Transcriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. Belongs to the ARR family. Type-B subfamily.


ensembl_gene_id: Q6H849
symbol: NIT4
gene_biotype: protein_coding
description:
  Bifunctional nitrilase/nitrile hydratase NIT4; Highly specific for beta-cyano-L-alanine (Ala(CN)). Low activity with 3-phenylpropionitrile (PPN). Not associated with auxin production but may be involved in cyanide detoxification (By similarity).


ensembl_gene_id: Q6H8D5
symbol: OJ1006_A02.24
gene_biotype: protein_coding
description:
  Coatomer subunit beta'-2; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity).


ensembl_gene_id: Q6H8D6
symbol: OJ1006_A02.22
gene_biotype: protein_coding
description:
  Putative coatomer subunit beta'-3; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity).


ensembl_gene_id: Q6I570
symbol: CYT3_ORYSJ
gene_biotype: protein_coding
description:
  Cysteine proteinase inhibitor 3; Specific inhibitor of cysteine proteinases. Probably involved in the regulation of endogenous processes and in defense against pests and pathogens (By similarity); Belongs to the cystatin family. Phytocystatin subfamily.


ensembl_gene_id: Q6I576
symbol: SPL9
gene_biotype: protein_coding
description:
  Squamosa promoter-binding-like protein 9; Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'.


ensembl_gene_id: Q6I581
symbol: GH3.5
gene_biotype: protein_coding
description:
  Jasmonoyl--L-amino acid synthetase GH3.5; Catalyzes the synthesis of jasmonate-amino acid conjugates by adenylation. Catalyzes the conjugation of jasmonate (JA) to Ile when expressed in a heterologous system (E.Coli). Catalyzes in vitro the conjugation of jasmonate (JA) to Ile, Phe, Cys, Leu, Met, Ala, Val and Trp. Involved in the production of JA-Ile in response to infection by the rice blast fungus Magnaporthe oryzae. Required for the accumulation of the flavonoid phytoalexin sakuranetin in response to infection by the rice blast fungus. Involved in herbivory-induced JA-Ile accumulat [...]


ensembl_gene_id: Q6I583
symbol: Q6I583_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J013000H16, full insert sequence; Belongs to the mitochondrial carrier (TC 2.A.29) family.


ensembl_gene_id: Q6I587
symbol: CPK15
gene_biotype: protein_coding
description:
  Calcium-dependent protein kinase 15; May play a role in signal transduction pathways that involve calcium as a second messenger.


ensembl_gene_id: Q6I588
symbol: OsJ_19708
gene_biotype: protein_coding
description:
  Probable protein ABIL4; Involved in regulation of actin and microtubule organization. Part of a WAVE complex that activates the Arp2/3 complex (By similarity).


ensembl_gene_id: Q6I5C3
symbol: PYL5
gene_biotype: protein_coding
description:
  Abscisic acid receptor PYL5; Intracellular abscisic acid (ABA) receptor that functions as a positive regulator of ABA signaling pathway. Together with ABI5, PP2C30 and SAPK2, is part of an ABA signaling unit that modulates seed germination and early seedling growth. Acts as positive regulator of abiotic stress- responsive gene expression. Inhibits the protein phosphatases PP2C06 and PP2C09 when activated by ABA.


ensembl_gene_id: Q6I5I8
symbol: CPK16
gene_biotype: protein_coding
description:
  Calcium-dependent protein kinase 16; May play a role in signal transduction pathways that involve calcium as a second messenger; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.


ensembl_gene_id: Q6I5Q6
symbol: RLCK185
gene_biotype: protein_coding
description:
  Receptor-like cytoplasmic kinase 185; Functions as an immediate downstream signaling partner of CERK1 in the microbial peptidoglycans (PGNs) and fungal chitin signaling pathways that mediate innate immunity. Is required for chitin-induced activation of MPK3 and MPK6. Participates to the activation of defense genes during response to PGN and chitin. Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q6I5V5
symbol: Q6I5V5_ORYSJ
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: Q6I5Y0
symbol: CDKC-1
gene_biotype: protein_coding
description:
  Cyclin-dependent kinase C-1; Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily.


ensembl_gene_id: Q6I615
symbol: Q6I615_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:001-021-E08, full insert sequence; Belongs to the iron/ascorbate-dependent oxidoreductase family.


ensembl_gene_id: Q6I621
symbol: B'KAPPA
gene_biotype: protein_coding
description:
  Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform; B regulatory subunit of phosphatase 2A (PP2A) involved in salt stress response. Under salt stress conditions, required for the catalytic activity of PP2A and the dephosphorylation of SIT1, a negative regulator of salt tolerance. Dephosphorylation of SIT1 turns off salt-induced SIT1 activity directly, which has a positive effect on salt tolerance.


ensembl_gene_id: Q6I628
symbol: PSS2
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--serine O-phosphatidyltransferase 2; Catalyzes a base-exchange reaction in which the polar head group of phosphatidylethanolamine (PE) or phosphatidylcholine (PC) is replaced by L-serine.


ensembl_gene_id: Q6IEQ7
symbol: WRKY24
gene_biotype: protein_coding
description:
  WRKY transcription factor WRKY24; Transcription activator. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Negative regulator of both gibberellic acid (GA) and abscisic acid (ABA) signaling in aleurone cells, probably by interfering with GAM1, via the specific repression of GA- and ABA- induced promoters.


ensembl_gene_id: Q6IVC2
symbol: TGAL1
gene_biotype: protein_coding
description:
  Transcription factor TGAL1; Transcriptional regulator involved in defense response. Belongs to the bZIP family.


ensembl_gene_id: Q6J1A5
symbol: DREB1D
gene_biotype: protein_coding
description:
  Dehydration-responsive element-binding protein 1D; Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription (By similarity).


ensembl_gene_id: Q6K1C4
symbol: CAX3
gene_biotype: protein_coding
description:
  Vacuolar cation/proton exchanger 3; Vacuolar cation/proton exchanger (CAX). Translocates Ca(2+) and other metal ions into vacuoles using the proton gradient formed by H(+)-ATPase and H(+)-pyrophosphatase.


ensembl_gene_id: Q6K1S6
symbol: MYB30
gene_biotype: protein_coding
description:
  Transcription factor MYB30; Acts as negative regulator of cold tolerance. Negatively regulates beta-amylase genes at the transcriptional level in response to cold stress. Suppresses beta-amylase gene expression by interacting with TIFY11A/JAZ9. Maltose produced by beta-amylases has a role in protecting cell membranes under cold stress conditions in rice and may contribute to the cold tolerance as a compatible solute.


ensembl_gene_id: Q6K1W6
symbol: Q6K1W6_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:001-047-A12, full insert sequence; Belongs to the universal ribosomal protein uL22 family.


ensembl_gene_id: Q6K1Y8
symbol: Q6K1Y8_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:002-185-B01, full insert sequence; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Q6K209
symbol: CAL1
gene_biotype: protein_coding
description:
  Defensin-like protein CAL1; Plant defensin-like protein involved in accumulation of cadmium (Cd) in rice leaves. Mediates Cd efflux from cytosol into extracellular spaces via chelation. This drives Cd secretion from xylem parenchyma cells into the xylem vessels, hence lowering Cd levels in cytosol meanwhile promoting Cd translocation from roots to shoots.


ensembl_gene_id: Q6K215
symbol: PIP2-2
gene_biotype: protein_coding
description:
  Probable aquaporin PIP2-2; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.


ensembl_gene_id: Q6K223
symbol: ARF8
gene_biotype: protein_coding
description:
  Auxin response factor 8; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).


ensembl_gene_id: Q6K271
symbol: FCA
gene_biotype: protein_coding
description:
  Flowering time control protein FCA; Plays a major role in the promotion of the transition of the vegetative meristem to reproductive development. Required for RNA-mediated chromatin silencing of a range of loci in the genome. Cotranscriptionally recognizes aberrant RNA and marks it for silencing. Controls alternative cleavage and polyadenylation on pre- mRNAs and antisense RNAs (By similarity). Regulates flowering time, seed size and cell volume, probably via the modulation of cell size.


ensembl_gene_id: Q6K2E1
symbol: UGE-4
gene_biotype: protein_coding
description:
  UDP-glucose 4-epimerase 4; Catalyzes the interconversion between UDP-glucose and UDP- galactose; Belongs to the NAD(P)-dependent epimerase/dehydratase family.


ensembl_gene_id: Q6K309
symbol: OsJ_28554
gene_biotype: protein_coding
description:
  Putative cysteine proteinase inhibitor 11; Specific inhibitor of cysteine proteinases. Probably involved in the regulation of endogenous processes and in defense against pests and pathogens (By similarity); Belongs to the cystatin family. Phytocystatin subfamily.


ensembl_gene_id: Q6K3D8
symbol: GL1-6
gene_biotype: protein_coding
description:
  Very-long-chain aldehyde decarbonylase GL1-6; Aldehyde decarbonylase involved in the conversion of aldehydes to alkanes. Core component of a very-long-chain alkane synthesis complex; Belongs to the sterol desaturase family.


ensembl_gene_id: Q6K3R5
symbol: NCL2
gene_biotype: protein_coding
description:
  Sodium/calcium exchanger NCL2; May function as a sodium/calcium exchanger (NCX) and participate in the maintenance of calcium homeostasis. May play a role abiotic stress responses.


ensembl_gene_id: Q6K3T2
symbol: OJ1134_F06.17
gene_biotype: protein_coding
description:
  Potassium channel KAT1; Probable inward-rectifying potassium channel. Assuming opened or closed conformations in response to the voltage difference across the membrane, the channel is activated by hyperpolarization (By similarity); Belongs to the potassium channel family. Plant (TC 1.A.1.4) subfamily.


ensembl_gene_id: Q6K3W2
symbol: Q6K3W2_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J023022K03, full insert sequence; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q6K3Z3
symbol: Q6K3Z3_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J033096I21, full insert sequence; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Q6K431
symbol: TRX1
gene_biotype: protein_coding
description:
  Histone-lysine N-methyltransferase TRX1; Possesses histone H3 methyltransferase activity in vitro. Methylates 'Lys-4' of histone H3. H3 'Lys-4' methylation represents a specific tag for epigenetic transcriptional activation. Functions as a receptor for the lipid messenger phosphatidylinositol 5-phosphate (PI5P), which regulates negatively its transcriptional activation activity (By similarity). Involved in the regulation of flowering time and floral induction under long day (LD) conditions. Acts as an activator of flowering under LD conditions. May function through binding to EHD3, a r [...]


ensembl_gene_id: Q6K471
symbol: OJ1116_H10.13
gene_biotype: protein_coding
description:
  Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin.


ensembl_gene_id: Q6K498
symbol: HOX4
gene_biotype: protein_coding
description:
  Homeobox-leucine zipper protein HOX4; Probable transcription activator that binds to the DNA sequence 5'-CAAT[AT]ATTG-3'. May be involved in the regulation of gibberellin signaling.


ensembl_gene_id: Q6K4A3
symbol: Q6K4A3_ORYSJ
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase catalytic subunit 1; Catalytic subunit of the queuine tRNA-ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, formi [...]


ensembl_gene_id: Q6K4D4
symbol: Q6K4D4_ORYSJ
gene_biotype: protein_coding
description:
  Os09g0471900 protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: Q6K4N0
symbol: RSZP21
gene_biotype: protein_coding
description:
  Serine/arginine-rich splicing factor RSZ21; Involved in pre-mRNA splicing; Belongs to the splicing factor SR family.


ensembl_gene_id: Q6K4T4
symbol: SERK4
gene_biotype: protein_coding
description:
  LRR receptor kinase SERK2; May be involved in the regulation of plant growth through the brassinosteroid (BR) signaling pathway; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q6K4V2
symbol: SWEET4
gene_biotype: protein_coding
description:
  Bidirectional sugar transporter SWEET4; Mediates both low-affinity uptake and efflux of sugar across the plasma membrane.


ensembl_gene_id: Q6K508
symbol: GLUD1
gene_biotype: protein_coding
description:
  Glutelin type-D 1 acidic chain; Seed storage protein; Belongs to the 11S seed storage protein (globulins) family.


ensembl_gene_id: Q6K537
symbol: DOF3
gene_biotype: protein_coding
description:
  Dof zinc finger protein 3; Transcriptional activator that binds specifically to the DNA consensus core sequence 5'-AAAG-3' also known as prolamin box. Can activate the expression of genes encoding for the seed storage proteins glutelin, prolamin and globulin. Functions synergistically with RISBZ/BZIP58 to positively regulate quantitatively many seed storage proteins. Functions synergistically with RISBZ1/BZIP58 to positively regulate some metabolic enzymes, such as alanine aminotransferase and pyruvate phosphate dikinase, that are expressed in developing seeds. Functions synergisticall [...]


ensembl_gene_id: Q6K548
symbol: VDAC1
gene_biotype: protein_coding
description:
  Mitochondrial outer membrane protein porin 1; Forms a channel through the mitochondrial outer membrane that allows diffusion of small hydrophilic molecules. The channel adopts an open conformation at low or zero membrane potential and a closed conformation at potentials above 30-40 mV. The open state has a weak anion selectivity whereas the closed state is cation-selective (By similarity); Belongs to the eukaryotic mitochondrial porin (TC 1.B.8.1) family.


ensembl_gene_id: Q6K550
symbol: HIRL2
gene_biotype: protein_coding
description:
  Hypersensitive-induced response protein-like protein 2; Positive regulator of hypersensitive response (HR)-like cell death. May be involved in potassium ion channel regulation.


ensembl_gene_id: Q6K5F8
symbol: CDKG-1
gene_biotype: protein_coding
description:
  Cyclin-dependent kinase G-1; Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily.


ensembl_gene_id: Q6K5G8
symbol: GAPC3
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase 3, cytosolic; Key enzyme in glycolysis that catalyzes the first step of the pathway by converting D-glyceraldehyde 3-phosphate (G3P) into 3- phospho-D-glyceroyl phosphate. Essential for the maintenance of cellular ATP levels and carbohydrate metabolism (By similarity). Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: Q6K5P8
symbol: OsJ_006583
gene_biotype: protein_coding
description:
  Putative germin-like protein 2-3; May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.


ensembl_gene_id: Q6K5P9
symbol: OsJ_006582
gene_biotype: protein_coding
description:
  Putative germin-like protein 2-2; May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.


ensembl_gene_id: Q6K5Q0
symbol: P0579G08.10
gene_biotype: protein_coding
description:
  Putative germin-like protein 2-1; May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.


ensembl_gene_id: Q6K5R6
symbol: Q6K5R6_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:002-175-C06, full insert sequence; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: Q6K5X1
symbol: G1L6
gene_biotype: protein_coding
description:
  Protein G1-like6; Probable transcription regulator that acts as a developmental regulator by promoting cell growth in response to light; Belongs to the plant homeotic and developmental regulators ALOG protein family.


ensembl_gene_id: Q6K602
symbol: SWEET15
gene_biotype: protein_coding
description:
  Bidirectional sugar transporter SWEET15; Mediates both low-affinity uptake and efflux of sugar across the plasma membrane.


ensembl_gene_id: Q6K609
symbol: GRXC3
gene_biotype: protein_coding
description:
  Glutaredoxin-C3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins (By similarity); Belongs to the glutaredoxin family. CC-type subfamily.


ensembl_gene_id: Q6K638
symbol: HCT2
gene_biotype: protein_coding
description:
  Hydroxycinnamoyltransferase 2; Hydroxycinnamoyl transferase that catalyzes the transfer of an acyl from p-coumaryol-CoA to various acyl acceptors. Can use feruloyl-CoA and caffeoyl-CoA as acyl donors. Belongs to the plant acyltransferase family.


ensembl_gene_id: Q6K641
symbol: OJ1004_A05.11
gene_biotype: protein_coding
description:
  Eukaryotic translation initiation factor isoform 4G-2; Plays a role in the accumulation of a sobemovirus (RYMV) during viral infection; Belongs to the eukaryotic initiation factor 4G family.


ensembl_gene_id: Q6K669
symbol: OJ1695_H09.4
gene_biotype: protein_coding
description:
  Leucine aminopeptidase 2, chloroplastic; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides (By similarity). Belongs to the peptidase M17 family.


ensembl_gene_id: Q6K678
symbol: HDR1
gene_biotype: protein_coding
description:
  Protein HEADING DATE REPRESSOR 1; Regulates flowering time via a photoperiod-dependent pathway. Suppressor of flowering that upregulates HD1 and downregulates EHD1 in long days (LD), thus leading to the down-regulation of HD3A and RFT1. Triggers OSK4-mediated HD1 phosphorylation.


ensembl_gene_id: Q6K699
symbol: Q6K699_ORYSJ
gene_biotype: protein_coding
description:
  Actin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.


ensembl_gene_id: Q6K6C0
symbol: Q6K6C0_ORYSJ
gene_biotype: protein_coding
description:
  2-(3-amino-3-carboxypropyl)histidine synthase subunit 1; Required for the first step of diphthamide biosynthesis, the transfer of 3-amino-3-carboxypropyl from S-adenosyl-L-methionine to a histidine residue. Diphthamide is a post-translational modification of histidine which occurs in elongation factor 2.


ensembl_gene_id: Q6K6K7
symbol: OsJ_06853
gene_biotype: protein_coding
description:
  Ubiquitin-like modifier-activating enzyme 5; E1-like enzyme which activates UFM1; Belongs to the ubiquitin-activating E1 family. UBA5 subfamily.


ensembl_gene_id: Q6K6S5
symbol: HSFA5
gene_biotype: protein_coding
description:
  Heat stress transcription factor A-5; Transcriptional regulator that specifically binds DNA of heat shock promoter elements (HSE).


ensembl_gene_id: Q6K739
symbol: BASS3
gene_biotype: protein_coding
description:
  Probable sodium/metabolite cotransporter BASS3, chloroplastic; May function as sodium-coupled metabolite transporter across the chloroplast envelope; Belongs to the bile acid:sodium symporter (BASS) (TC 2.A.28) family.


ensembl_gene_id: Q6K765
symbol: KIN12B
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-12B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-12 subfamily.


ensembl_gene_id: Q6K7B8
symbol: ITPK4
gene_biotype: protein_coding
description:
  Inositol-tetrakisphosphate 1-kinase 4; Kinase that can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4 or Ins(1,3,4)P3 and participates in phytic acid biosynthesis in developing seeds. Phytic acid is the primary storage form of phosphorus in cereal grains and other plant seeds. Belongs to the ITPK1 family.


ensembl_gene_id: Q6K7C2
symbol: Q6K7C2_ORYSJ
gene_biotype: protein_coding
description:
  Gamma-glutamylcyclotransferase; Catalyzes the formation of 5-oxoproline from gamma-glutamyl dipeptides and plays a significant role in glutathione (GSH) homeostasis.


ensembl_gene_id: Q6K7E6
symbol: EREBP1
gene_biotype: protein_coding
description:
  Ethylene-responsive transcription factor 1; Probable transcriptional activator that may be involved in defense signaling pathway. Binds in vitro to the DNA sequence 5'- AGCCGCC-3' of the GCC-box element found in pathogenesis-related (PR) gene promoters. The transcriptional activation is enhanced in vitro by the presence of MPK12/BWMK1.


ensembl_gene_id: Q6K7H2
symbol: OJ1293_A01.3
gene_biotype: protein_coding
description:
  UMP-CMP kinase 4; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.


ensembl_gene_id: Q6K7R2
symbol: IRL6
gene_biotype: protein_coding
description:
  Plant intracellular Ras-group-related LRR protein 6; Leucine-rich repeat protein that likely mediates protein interactions, possibly in the context of signal transduction.


ensembl_gene_id: Q6K7S7
symbol: CCMH
gene_biotype: protein_coding
description:
  Cytochrome c-type biogenesis CcmH-like mitochondrial protein; Plays a role in mitochondrial cytochrome c maturation. Probable component of a heme lyase complex involved in the reduction of apocytochrome c; Belongs to the CcmH/CycL/Ccl2/NrfF family.


ensembl_gene_id: Q6K7S9
symbol: Q6K7S9_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J033073C19, full insert sequence; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: Q6K7V6
symbol: VTE1
gene_biotype: protein_coding
description:
  Probable tocopherol cyclase, chloroplastic; Involved in the synthesis of both tocopherols and tocotrienols (vitamin E), which presumably protect photosynthetic complexes from oxidative stress. Catalyzes the conversion of 2-methyl- 6-phytyl-1,4-hydroquinone and 2,3-dimethyl-5-phytyl-1,4-hydroquinone (DMPQ) to delta- and gamma-tocopherol respectively. Converts also 2,3- dimethyl-5-geranylgeranyl-1,4-hydroquinone (DMGQ) to gamma-tocotrienol (By similarity).


ensembl_gene_id: Q6K7X3
symbol: Q6K7X3_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J013170D14, full insert sequence; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q6K833
symbol: OJ1369_G08.2
gene_biotype: protein_coding
description:
  mRNA cap guanine-N7 methyltransferase 2; mRNA-capping methyltransferase that methylates the N7 position of the added guanosine to the 5'-cap structure of mRNAs. Binds RNA containing 5'-terminal GpppC (By similarity); Belongs to the class I-like SAM-binding methyltransferase superfamily. mRNA cap 0 methyltransferase family.


ensembl_gene_id: Q6K846
symbol: IAA9
gene_biotype: protein_coding
description:
  Auxin-responsive protein IAA9; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.


ensembl_gene_id: Q6K881
symbol: PI4KG4
gene_biotype: protein_coding
description:
  Phosphatidylinositol 4-kinase gamma 4; The phosphorylation of phosphatidylinositol (PI) to PI4P is the first committed step in the generation of phosphatidylinositol 4,5- bisphosphate (PIP2), a precursor of the second messenger inositol 1,4,5-trisphosphate (InsP3) (By similarity). Involved in the control of flowering under long day conditions by promoting degradation of FTIP1. Recruits FTIP1 for degradation by the 26S proteasome in leaves, which affects RFT1 transport to the shoot apical meristem (SAM) ; Belongs to the PI3/PI4-kinase family. Type II PI4K subfamily.


ensembl_gene_id: Q6K8D9
symbol: SKIPA
gene_biotype: protein_coding
description:
  SNW/SKI-interacting protein A; Acts as positive regulator of drought and salt tolerance. Acts as positive regulator of cell viability. Belongs to the SNW family.


ensembl_gene_id: Q6K8E7
symbol: OJ1111_C07.25
gene_biotype: protein_coding
description:
  Long chain base biosynthesis protein 1b; Serine palmitoyltransferase (SPT). The heterodimer formed with LCB2 constitutes the catalytic core (By similarity). Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: Q6K8J4
symbol: ISPG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic; Enzyme of the plastid non-mevalonate pathway for isoprenoid biosynthesis that converts 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Is essential for chloroplast development (By similarity); Belongs to the IspG family.


ensembl_gene_id: Q6K8S7
symbol: CSTLP5
gene_biotype: protein_coding
description:
  CMP-sialic acid transporter 5; Sugar transporter involved in the transport of CMP-sialic acid from the cytoplasm into the Golgi. May transport important nucleotide sugars such as CMP-Kdo (2-keto-3-deoxy-D-manno-octulosonic acid) in physiological conditions; Belongs to the nucleotide-sugar transporter family. CMP- Sialate:CMP antiporter (TC 2.A.7.12) subfamily.


ensembl_gene_id: Q6K8X6
symbol: RR23
gene_biotype: protein_coding
description:
  Two-component response regulator ORR23; Transcriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. Belongs to the ARR family. Type-B subfamily.


ensembl_gene_id: Q6K8Y2
symbol: Q6K8Y2_ORYSJ
gene_biotype: protein_coding
description:
  RNA polymerase II C-terminal domain phosphatase-like; This promotes the activity of RNA polymerase II.


ensembl_gene_id: Q6K908
symbol: ARP3
gene_biotype: protein_coding
description:
  Actin-related protein 3; Functions as ATP-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the pointed end of the daughter actin filament. Regulates the directionality of cell expansion by regulating the actin organization, and thus the microtubules distribution and the fusion of small vacuoles (By similarity).


ensembl_gene_id: Q6K953
symbol: GRXC4
gene_biotype: protein_coding
description:
  Glutaredoxin-C4, chloroplastic; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins (By similarity); Belongs to the glutaredoxin family. CPYC subfamily.


ensembl_gene_id: Q6K965
symbol: OEP21
gene_biotype: protein_coding
description:
  Outer envelope pore protein 21, chloroplastic; Voltage-dependent rectifying anion channel that facilitates the translocation between chloroplast and cytoplasm of phosphorylated carbohydrates such as triosephosphate, 3-phosphoglycerate and inorganic phosphate (Pi) depending of ATP to triosephosphate ratio in the plastidial intermembrane space; in high triosephosphate/ATP conditions (e.g. photosynthesis), export of triosphosphate from chloroplast (outward rectifying channels), but in high ATP/triosephosphate conditions (e.g. dark phase), import of phosphosolutes (inward rectifying channe [...]


ensembl_gene_id: Q6K968
symbol: CPK6
gene_biotype: protein_coding
description:
  Calcium-dependent protein kinase 6; May play a role in signal transduction pathways that involve calcium as a second messenger; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.


ensembl_gene_id: Q6K972
symbol: AGO1C
gene_biotype: protein_coding
description:
  Protein argonaute 1C; Probably involved in the RNA silencing pathway. May bind to short RNAs such as microRNAs (miRNAs) or short interfering RNAs (siRNAs), and represses the translation of mRNAs which are complementary to them (By similarity).


ensembl_gene_id: Q6K973
symbol: SUS6
gene_biotype: protein_coding
description:
  Sucrose synthase 6; Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways; Belongs to the glycosyltransferase 1 family. Plant sucrose synthase subfamily.


ensembl_gene_id: Q6K990
symbol: KIN10A
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-10A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-10 subfamily.


ensembl_gene_id: Q6K991
symbol: PHO1-2
gene_biotype: protein_coding
description:
  Phosphate transporter PHO1-2; Involved in the transfer of inorganic phosphate (Pi) from roots to shoots.


ensembl_gene_id: Q6K9A2
symbol: CCR1
gene_biotype: protein_coding
description:
  Cinnamoyl-CoA reductase 1; Involved in the latter stages of lignin biosynthesis. Catalyzes one of the last steps of monolignol biosynthesis, the conversion of cinnamoyl-CoAs into their corresponding cinnamaldehydes. Probably involved in the formation of lignin in defense responses. Belongs to the NAD(P)-dependent epimerase/dehydratase family. Dihydroflavonol-4-reductase subfamily.


ensembl_gene_id: Q6K9C1
symbol: OJ1476_F05.22
gene_biotype: protein_coding
description:
  Protein TAB2 homolog, chloroplastic; Nuclear genome-encoded factor involved in the biogenesis of photosystem I (PSI). Required for the accumulation of PSI during plant development. Does not seem to be required for the translation of mRNAs of the PSI subunits.


ensembl_gene_id: Q6K9C3
symbol: RSZ23
gene_biotype: protein_coding
description:
  Serine/arginine-rich splicing factor RSZ23; Involved in pre-mRNA splicing. In protoplast assay, enhances splicing efficiency of WAXY intron 1 and alters the selection of the 5'-splice sites by stimulating site 1 (proximal site). Belongs to the splicing factor SR family.


ensembl_gene_id: Q6K9F6
symbol: GL1-4
gene_biotype: protein_coding
description:
  Very-long-chain aldehyde decarbonylase GL1-4; Aldehyde decarbonylase involved in the conversion of aldehydes to alkanes. Core component of a very-long-chain alkane synthesis complex; Belongs to the sterol desaturase family.


ensembl_gene_id: Q6K9G1
symbol: AMT1-2
gene_biotype: protein_coding
description:
  Ammonium transporter 1 member 2; Ammonium transporter probably involved in ammonium uptake from the soil and ammonium uptake and retrieval in the vascular system. Belongs to the ammonia transporter channel (TC 1.A.11.2) family.


ensembl_gene_id: Q6K9G3
symbol: AMT1-3
gene_biotype: protein_coding
description:
  Ammonium transporter 1 member 3; Ammonium transporter probably involved in ammonium uptake from the soil; Belongs to the ammonia transporter channel (TC 1.A.11.2) family.


ensembl_gene_id: Q6K9N1
symbol: CKI1
gene_biotype: protein_coding
description:
  Casein kinase 1; Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. Can phosphorylate casein in vitro. Required for normal root development through modulation of cell elongation. Plants silencing CKI1 show abnormal root development, with reduced number of lateral and adventitious roots, and shortened primary roots as a result of reduced cell elongation. May be involved in abscisic acid (ABA) and brassinosteroid (BR) signaling pathways. Plays an important role in the adaptive growth and fitness under low temperatu [...]


ensembl_gene_id: Q6K9N5
symbol: Q6K9N5_ORYSJ
gene_biotype: protein_coding
description:
  Long-chain-alcohol oxidase; Long-chain fatty alcohol oxidase involved in the omega- oxidation pathway of lipid degradation.


ensembl_gene_id: Q6K9N6
symbol: OJ1234_B11.18
gene_biotype: protein_coding
description:
  Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: Q6K9T0
symbol: RR3
gene_biotype: protein_coding
description:
  Two-component response regulator ORR3; Functions as response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Type-A response regulators seem to act as negative regulators of the cytokinin signaling. Belongs to the ARR family. Type-A subfamily.


ensembl_gene_id: Q6K9U2
symbol: RPA2A
gene_biotype: protein_coding
description:
  Replication protein A 32 kDa subunit A; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions (By similarity).


ensembl_gene_id: Q6KAA4
symbol: Q6KAA4_ORYSJ
gene_biotype: protein_coding
description:
  V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.


ensembl_gene_id: Q6KAE3
symbol: Q6KAE3_ORYSJ
gene_biotype: protein_coding
description:
  Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.


ensembl_gene_id: Q6KAI0
symbol: PNP2
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase 2, mitochondrial; Involved in the 3'-end maturation of mitochondrial mRNAs, rRNAs and tRNAs. Functions as a poly(A) mRNA 3'-5' degrading phosphorylase (By similarity).


ensembl_gene_id: Q6KAJ4
symbol: MCM5
gene_biotype: protein_coding
description:
  DNA replication licensing factor MCM5; Probable component of the MCM2-7 complex (MCM complex) that may function as a DNA helicase and which is essential to undergo a single round of replication initiation and elongation per cell cycle in eukaryotic cells.


ensembl_gene_id: Q6L4D2
symbol: PM19L
gene_biotype: protein_coding
description:
  Membrane protein PM19L; May be involved in abiotic stress response through abscisic acid-dependent signaling.


ensembl_gene_id: Q6L4F8
symbol: RACK1B
gene_biotype: protein_coding
description:
  Guanine nucleotide-binding protein subunit beta-like protein B; Component of the RACK1 regulatory proteins that play a role in multiple signal transduction pathways; Belongs to the WD repeat G protein beta family. Ribosomal protein RACK1 subfamily.


ensembl_gene_id: Q6L4L4
symbol: SIZ1
gene_biotype: protein_coding
description:
  E3 SUMO-protein ligase SIZ1; Probable SUMO E3 ligase that may regulate Pi starvation responses; Belongs to the PIAS family.


ensembl_gene_id: Q6L4L8
symbol: Q6L4L8_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:001-038-E09, full insert sequence; Belongs to the mitochondrial carrier (TC 2.A.29) family.


ensembl_gene_id: Q6L4N8
symbol: GCP2
gene_biotype: protein_coding
description:
  Probable tRNA N6-adenosine threonylcarbamoyltransferase; Component of the EKC/KEOPS complex that is required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. The complex is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Likely plays a direct catalytic role in this reaction, but requires other protein(s) of the complex to fulfill this activity.


ensembl_gene_id: Q6L4R5
symbol: Q6L4R5_ORYSJ
gene_biotype: protein_coding
description:
  V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.


ensembl_gene_id: Q6L4R7
symbol: PP2C53
gene_biotype: protein_coding
description:
  Protein phosphatase 2C 53; Protein phosphatase that acts as negative regulator of abscisic acid (ABA) signaling. Involved in the regulation of root architecture development and drought resistance. Can dephosphorylate SAPK8 and SAPK10 in vitro. Together with PYL10, SAPK8 and SAPK10, may form an ABA signaling module involved in stress response.


ensembl_gene_id: Q6L4S0
symbol: DBB1
gene_biotype: protein_coding
description:
  DNA damage-binding protein 1; Required for DNA repair. Binds to DDB2 to form the UV-damaged DNA-binding protein complex (the UV-DDB complex). The UV-DDB complex may recognize UV-induced DNA damage and recruit proteins of the nucleotide excision repair pathway (the NER pathway) to initiate DNA repair (Probable). May function as the substrate recognition module for a DCX (DDB1-CUL4-X-box) E3 ubiquitin-protein ligase complex (By similarity).


ensembl_gene_id: Q6L4S3
symbol: HIRL1
gene_biotype: protein_coding
description:
  Hypersensitive-induced response protein-like protein 1; Positive regulator of hypersensitive response (HR)-like cell death. May be involved in potassium ion channel regulation.


ensembl_gene_id: Q6L4V0
symbol: MSH5
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MSH5; Involved in meiotic recombination. Required for reciprocal recombination and proper segregation of homologous chromosomes at meiosis. Promotes homologous recombination through facilitating chiasma formation during prophase I. Involved in the control of class I crossover (interference-sensitive crossover) formation. Belongs to the DNA mismatch repair MutS family.


ensembl_gene_id: Q6L500
symbol: OJ1281_H05.14
gene_biotype: protein_coding
description:
  Probable histone H2A.4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.


ensembl_gene_id: Q6L506
symbol: RIBA3
gene_biotype: protein_coding
description:
  Probable monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic; Involved in riboflavin biosynthesis. Catalyzes the conversion of GTP to 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate (By similarity); In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: Q6L512
symbol: KIN10C
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-10C; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-10 subfamily.


ensembl_gene_id: Q6L534
symbol: LIP1P-2
gene_biotype: protein_coding
description:
  Lipoyl synthase 2, chloroplastic; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: Q6L538
symbol: CSLC7
gene_biotype: protein_coding
description:
  Probable xyloglucan glycosyltransferase 7; Probable beta-1,4-glucan synthase rather involved in the synthesis of the xyloglucan backbone than cellulose. Seems to work simultaneously with xyloglucan 6-xylosyltransferase. Xyloglucan is a noncellulosic polysaccharides of plant cell wall and consists of a glucan backbone substituted by xylose, galactose and fucose (By similarity); Belongs to the glycosyltransferase 2 family. Plant cellulose synthase-like C subfamily.


ensembl_gene_id: Q6L545
symbol: GID1
gene_biotype: protein_coding
description:
  Gibberellin receptor GID1; Functions as soluble gibberellin (GA) receptor. GA is an essential hormone that regulates growth and development in plants. Binds with high affinity the biologically active GAs such as GA1, GA3 and GA4, but has low or no affinity for the biologically inactive GAs. Upon GA-binding, it interacts with the DELLA protein SLR1, a repressor of GA signaling. This leads to SLR1 degradation by the proteasome, allowing the GA signaling pathway; Belongs to the 'GDXG' lipolytic enzyme family.


ensembl_gene_id: Q6L568
symbol: SWEET5
gene_biotype: protein_coding
description:
  Bidirectional sugar transporter SWEET5; Mediates both low-affinity uptake and efflux of sugar across the plasma membrane (By similarity). Can transport galactose. Prevents growth but promotes senescence. Involved in regulating the crosstalk between sugar and auxin. Regulates negatively the auxin signaling pathway and translocation ; Belongs to the SWEET sugar transporter family.


ensembl_gene_id: Q6L589
symbol: RH1
gene_biotype: protein_coding
description:
  NRR repressor homolog 1; Binds to and represses NPR1/NH1-mediated transcriptional activation of LG2 in vitro.


ensembl_gene_id: Q6L590
symbol: BIP3
gene_biotype: protein_coding
description:
  Heat shock 70 kDa protein BIP3; Functions as chaperone during endoplasmic reticulum (ER) stress response.


ensembl_gene_id: Q6L5B5
symbol: PTD
gene_biotype: protein_coding
description:
  Protein PARTING DANCERS homolog; Essential for normal crossover (CO) formation during meiosis. Essential component for the formation of class I meiotic COs. Interacts with SHOC1, another meiotic component, to regulate CO formation, possibly by stabilizing the recombination intermediates during meiosis. PTD and SHOC1 may form transient heterotrimeric or heterotetrametric complexes with HEI10 and/or ZIP4 to promote class I COs formation. Does not seem to be involved in early meiotic recombination steps involving double-strand break (DSB) formation, processing, and single-strand invasion. [...]


ensembl_gene_id: Q6L5E5
symbol: GATA15
gene_biotype: protein_coding
description:
  GATA transcription factor 15; Probable transcription factor that regulates organogenesis during transition from the vegetative to the reproductive phase. Regulates the expression of CYP78A11/PLA1, HD3A and MADS1 during reproductive development in rice. May act upstream of CYP78A11/PLA1 during panicle development. Acts independently of the photoperiodic and gibberellin signaling pathways; Belongs to the type IV zinc-finger family. Class B subfamily.


ensembl_gene_id: Q6L5F5
symbol: IMCE
gene_biotype: protein_coding
description:
  Probable isoprenylcysteine alpha-carbonyl methylesterase ICME; Catalyzes the demethylation of isoprenylcysteine methylesters.


ensembl_gene_id: Q6L5F7
symbol: MPK17
gene_biotype: protein_coding
description:
  Mitogen-activated protein kinase 17; Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MAP kinase subfamily.


ensembl_gene_id: Q6L5H6
symbol: PP2C50
gene_biotype: protein_coding
description:
  Protein phosphatase 2C 50; Protein phosphatase involved in abscisic acid (ABA) signaling. Together with PYL3 and SAPK10, may form an ABA signaling module involved in stress response.


ensembl_gene_id: Q6L5I5
symbol: VDAC2
gene_biotype: protein_coding
description:
  Mitochondrial outer membrane protein porin 2; Forms a channel through the mitochondrial outer membrane that allows diffusion of small hydrophilic molecules. The channel adopts an open conformation at low or zero membrane potential and a closed conformation at potentials above 30-40 mV. The open state has a weak anion selectivity whereas the closed state is cation-selective (By similarity); Belongs to the eukaryotic mitochondrial porin (TC 1.B.8.1) family.


ensembl_gene_id: Q6L8F9
symbol: ZIP6
gene_biotype: protein_coding
description:
  Zinc transporter 6; Zinc transporter that may be involved in zinc uptake from the rhizosphere; Belongs to the ZIP transporter (TC 2.A.5) family.


ensembl_gene_id: Q6L8G0
symbol: ZIP5
gene_biotype: protein_coding
description:
  Zinc transporter 5; Zinc transporter that mediates zinc uptake from the rhizosphere and may be responsible for the translocation of zinc within the plant.


ensembl_gene_id: Q6L8G1
symbol: IRT2
gene_biotype: protein_coding
description:
  Fe(2+) transport protein 2; Iron transporter that may play a role in the uptake of iron from the rhizosphere across the plasma membrane in the root epidermal layer.


ensembl_gene_id: Q6MWE5
symbol: VIT1
gene_biotype: protein_coding
description:
  Vacuolar iron transporter 1; Vacuolar iron transporter involved in the transfer of iron ions from the cytosol to the vacuole for intracellular iron storage. Vacuolar iron storage is required for seed embryo and seedling development (Probable). May be involved in the regulation of iron translocation between flag leaves and seeds (Probable). Can transport zinc ions from the cytosol to the vacuole. Belongs to the CCC1 family.


ensembl_gene_id: Q6PL11
symbol: SKP1
gene_biotype: protein_coding
description:
  SKP1-like protein 1; Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, a RING-box and a F- box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends on the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1.


ensembl_gene_id: Q6PS57
symbol: CKS1
gene_biotype: protein_coding
description:
  Cyclin-dependent kinases regulatory subunit 1; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function; Belongs to the CKS family.


ensembl_gene_id: Q6QHD1
symbol: WRKY71
gene_biotype: protein_coding
description:
  WRKY transcription factor WRKY71; Transcription repressor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Represses specifically gibberellic acid (GA)-induced promoters in aleurone cells, probably by interfering with GAM1. Regulates, probably indirectly, the activation of defense-related genes such as GF14E during defense response. Modulates plant innate immunity against X.oryzae pv. oryzae (Xoo). Confers resistance to the virulent bacterial pathogen Xoo 13751, probably via the regulation of NPR1 and PR1b defens [...]


ensembl_gene_id: Q6S4P4
symbol: RF2b
gene_biotype: protein_coding
description:
  Transcription factor RF2b; Transcription factor probably involved in vascular development and shoot tissue organization. Binds to the DNA sequence 5'-CCGAGTGTGCCCCTGG-3' present in the promoter region Box II of the phloem-specific rice tungro bacilliform virus (RTBV) promoter. May regulate tissue-specific expression of the RTBV promoter and virus replication; Belongs to the bZIP family.


ensembl_gene_id: Q6T725
symbol: GluB
gene_biotype: protein_coding
description:
  cDNA, clone: J075105H10, full insert sequence; Seed storage protein; Belongs to the 11S seed storage protein (globulins) family.


ensembl_gene_id: Q6TAQ6
symbol: HOX10
gene_biotype: protein_coding
description:
  Homeobox-leucine zipper protein HOX10; Probable transcription factor; Belongs to the HD-ZIP homeobox family. Class III subfamily.


ensembl_gene_id: Q6UTZ2
symbol: MGD2
gene_biotype: protein_coding
description:
  Probable monogalactosyldiacylglycerol synthase 2, chloroplastic; Involved in the synthesis of the major structural component of photosynthetic membranes.


ensembl_gene_id: Q6VAK3
symbol: AHP1
gene_biotype: protein_coding
description:
  Histidine-containing phosphotransfer protein 1; Functions as two-component phosphorelay mediators between cytokinin sensor histidine kinases and response regulators (B-type ARRs). Plays an important role in propagating cytokinin signal transduction through the multistep His-to-Asp phosphorelay (By similarity). Functions as positive regulator of the cytokinin signaling pathway. May play a regulatory role in salt and drought tolerance during plant development.


ensembl_gene_id: Q6VAK4
symbol: AHP2
gene_biotype: protein_coding
description:
  Histidine-containing phosphotransfer protein 2; Functions as two-component phosphorelay mediators between cytokinin sensor histidine kinases and response regulators (B-type ARRs). Plays an important role in propagating cytokinin signal transduction through the multistep His-to-Asp phosphorelay (By similarity). Functions as positive regulator of the cytokinin signaling pathway. May play a regulatory role in salt and drought tolerance during plant development.


ensembl_gene_id: Q6VBA4
symbol: HSFC1A
gene_biotype: protein_coding
description:
  Heat stress transcription factor C-1a; Transcriptional regulator that specifically binds DNA of heat shock promoter elements (HSE).


ensembl_gene_id: Q6VBB2
symbol: HSFA2B
gene_biotype: protein_coding
description:
  Heat stress transcription factor A-2b; Transcriptional regulator that specifically binds DNA of heat shock promoter elements (HSE); Belongs to the HSF family. Class A subfamily.


ensembl_gene_id: Q6VMN7
symbol: ALD1
gene_biotype: protein_coding
description:
  Aminotransferase ALD1 homolog; Probable aminotransferase that may generate amino-acid- derived defense signals and be involved in resistance to pathogens. Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. LL-diaminopimelate aminotransferase subfamily.


ensembl_gene_id: Q6VVA6
symbol: HAK1
gene_biotype: protein_coding
description:
  Potassium transporter 1; High-affinity potassium transporter. Also transport rubidium, with the same affinity and cesium, with a lower affinity. Belongs to the HAK/KUP transporter (TC 2.A.72.3) family.


ensembl_gene_id: Q6X4A2
symbol: CIPK31
gene_biotype: protein_coding
description:
  CBL-interacting protein kinase 31; Involved in cold stress tolerance. CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner; Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.


ensembl_gene_id: Q6Y9P5
symbol: COI1A
gene_biotype: protein_coding
description:
  Coronatine-insensitive protein homolog 1a; Involved in jasmonate (JA) signaling. Required for jasmonate signaling in plant defense responses. Can complement Arabidopsis coi1-1 mutant and restore jasmonate signaling. Required for JA-regulated defense responses to infestation by the leaffolder Cnaphalocrocis medinalis. May act on an initial response of jasmonate-regulated gene expression toward drought tolerance as part of a BHLH148-TIFY11D/JAZ12-COI1A complex. Component of SCF(COI1) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradatio [...]


ensembl_gene_id: Q6YK44
symbol: SUT4
gene_biotype: protein_coding
description:
  Sucrose transport protein SUT4; Responsible for the transport of sucrose into the cell, with the concomitant uptake of protons (symport system). May also transport other glucosides (By similarity); Belongs to the glycoside-pentoside-hexuronide (GPH) cation symporter transporter (TC 2.A.2.4) family.


ensembl_gene_id: Q6YPG5
symbol: OJ1212_C06.17
gene_biotype: protein_coding
description:
  Putative nitric oxide synthase; Produces nitric oxide (NO) which is a messenger molecule involved in hormonal signaling and defense responses in plant. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOA1 subfamily.


ensembl_gene_id: Q6YS30
symbol: B1114D08.16-1
gene_biotype: protein_coding
description:
  DEAD-box ATP-dependent RNA helicase 5; ATP-dependent RNA helicase required for 60S ribosomal subunit synthesis. Involved in efficient pre-rRNA processing, predominantly at site A3, which is necessary for the normal formation of 25S and 5.8S rRNAs (By similarity); Belongs to the DEAD box helicase family. DDX5/DBP2 subfamily.


ensembl_gene_id: Q6YSA9
symbol: HAK4
gene_biotype: protein_coding
description:
  Probable potassium transporter 4; High-affinity potassium transporter; Belongs to the HAK/KUP transporter (TC 2.A.72.3) family.


ensembl_gene_id: Q6YSJ5
symbol: AGO16
gene_biotype: protein_coding
description:
  Protein argonaute 16; Probably involved in the RNA silencing pathway. May bind to short RNAs such as microRNAs (miRNAs) or short interfering RNAs (siRNAs), and represses the translation of mRNAs which are complementary to them (By similarity).


ensembl_gene_id: Q6YT00
symbol: OJ1112_E06.28
gene_biotype: protein_coding
description:
  Proteasome subunit alpha type-7-A; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity; Belongs to the peptidase T1A family.


ensembl_gene_id: Q6YT73
symbol: GLO5
gene_biotype: protein_coding
description:
  Peroxisomal (S)-2-hydroxy-acid oxidase GLO5; Photorespiratory enzyme that can exert a strong regulation over photosynthesis, possibly through a feed-back inhibition on Rubisco activase. Not required for oxalate accumulation (By similarity). Belongs to the FMN-dependent alpha-hydroxy acid dehydrogenase family.


ensembl_gene_id: Q6YT77
symbol: Q6YT77_ORYSJ
gene_biotype: protein_coding
description:
  cDNA, clone: J090052O12, full insert sequence; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q6YTF1
symbol: CYP76M8
gene_biotype: protein_coding
description:
  Oryzalexin D synthase; Enzyme of the diterpenoid metabolism involved in the biosynthesis of both phytocassane and the oryzalexin class of phytoalexins. Can hydroxylate syn-pimaradiene, ent-pimaradiene, ent- sandaracopimaradiene, ent-isokaurene, ent-kaurene, and ent-cassadiene, but no activity with syn-stemodene, syn-stemarene, syn-labdatriene, C11-alpha-hydroxy-ent-cassadiene or syn-pimadien-19-oic acid as substrates. Hydroxylates 3-alpha-hydroxy-ent-sandaracopimaradiene at C- 7-beta, resulting in a 3-alpha,7-beta-diol corresponding to oryzalexins D.


ensembl_gene_id: Q6YTF5
symbol: CYP76M5
gene_biotype: protein_coding
description:
  Cytochrome P450 76M5; Enzyme of the diterpenoid metabolism involved in the biosynthesis of the oryzalexin class of phytoalexins. Hydroxylates ent- sandaracopimaradien.


ensembl_gene_id: Q6YTI3
symbol: OsJ_07192
gene_biotype: protein_coding
description:
  Thioredoxin-like 4, chloroplastic; Probable thiol-disulfide oxidoreductase that may participate in various redox reactions; Belongs to the thioredoxin family.


ensembl_gene_id: Q6YTT4
symbol: Q6YTT4_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J013035I17, full insert sequence; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: Q6YTY3
symbol: OsJ_25070
gene_biotype: protein_coding
description:
  PHD finger protein ALFIN-LIKE 9; Histone-binding component that specifically recognizes H3 tails trimethylated on 'Lys-4' (H3K4me3), which mark transcription start sites of virtually all active genes; Belongs to the Alfin family.


ensembl_gene_id: Q6YU51
symbol: OsJ_23394
gene_biotype: protein_coding
description:
  Probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP). Is a limiting enzyme for plastidic isoprenoid biosynthesis and essential for chloroplast development (By similarity).


ensembl_gene_id: Q6YU88
symbol: KIN6
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-6; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-6 subfamily.


ensembl_gene_id: Q6YU90
symbol: Q6YU90_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J013108J23, full insert sequence; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: Q6YUA8
symbol: PSA2
gene_biotype: protein_coding
description:
  Protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic; Nuclear genome-encoded factor required for the accumulation of photosystem I (PSI) during plant development.


ensembl_gene_id: Q6YUL8
symbol: KIN4A
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-4A; Microtubule-dependent motor protein involved in the control of the oriented deposition of cellulose microfibrils. Involved in wall biogenesis and modification, and contributes to cell-cycle progression and cell division. Acts as a transcriptional activator in gibberellic acid (GA) biosynthesis pathway. Binds specifically to the DNA sequence 5'-ACCAACTTGAA-3' of the ent-kaurene oxidase 2 (CYP701A6 or OsKO2) promoter. May regulate CYP701A6 gene expression and mediates cell elongation by regulating the GA biosynthesis pathway.


ensembl_gene_id: Q6YUR7
symbol: Q6YUR7_ORYSJ
gene_biotype: protein_coding
description:
  U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; Belongs to the methyltransferase superfamily. METTL16/RlmF family.


ensembl_gene_id: Q6YUS0
symbol: Q6YUS0_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J013118M14, full insert sequence; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: Q6YUS3
symbol: TDR
gene_biotype: protein_coding
description:
  Transcription factor TDR; Transcription factor involved in the regulation of tapetum programmed cell death (PCD) and degradation during male reproductive development. Promotes tapetal PCD. Positively regulates the expression of two tapetum-specific genes, the cysteine protease CP1 and the lipid- transfer protein C6. Acts upstream from and interacts with EAT1/DTD in the regulation of tapetal PCD. Regulates the expression of genes related to aliphatic metabolism during pollen development. May play regulatory role in the lipidic metabolism involved in the formation of pollen wall.


ensembl_gene_id: Q6YUV3
symbol: MED11
gene_biotype: protein_coding
description:
  Mediator of RNA polymerase II transcription subunit 11; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.


ensembl_gene_id: Q6YUX0
symbol: ILI5
gene_biotype: protein_coding
description:
  Transcription factor ILI5; Atypical and probable non DNA-binding bHLH transcription factor that acts as a positive regulator of grain size. Binds the transcription repressor APG and forms a heterodimer of antagonistic basic helix-loop-helix transcription factors that regulates grain length and weight by controlling cell elongation in lemma and palea.


ensembl_gene_id: Q6YV04
symbol: HDAC2
gene_biotype: protein_coding
description:
  Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.


ensembl_gene_id: Q6YV23
symbol: CARA
gene_biotype: protein_coding
description:
  Carbamoyl-phosphate synthase small chain, chloroplastic; Involved in arginine biosynthesis; Belongs to the CarA family.


ensembl_gene_id: Q6YV88
symbol: CYP71Z7
gene_biotype: protein_coding
description:
  Ent-cassadiene hydroxylase; Enzyme of the diterpenoid metabolism involved in the biosynthesis of antibacterial oryzalides such as phytocassane. Catalyzes the hydroxylation of ent-cassa-12,15-diene to form ent-3beta-hydroxycassa-12,15-dien-2-one.


ensembl_gene_id: Q6YVE7
symbol: Q6YVE7_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J023115D04, full insert sequence; Belongs to the mitochondrial carrier (TC 2.A.29) family.


ensembl_gene_id: Q6YVI0
symbol: Q6YVI0_ORYSJ
gene_biotype: protein_coding
description:
  cDNA, clone: J100039M06, full insert sequence; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.


ensembl_gene_id: Q6YVJ0
symbol: NCED1
gene_biotype: protein_coding
description:
  9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic; Has a 11,12(11',12') 9-cis epoxycarotenoid cleavage activity. Catalyzes the first step of abscisic-acid biosynthesis from carotenoids.


ensembl_gene_id: Q6YVM4
symbol: CESA6
gene_biotype: protein_coding
description:
  Probable cellulose synthase A catalytic subunit 6 [UDP-forming]; Probable catalytic subunit of cellulose synthase terminal complexes ('rosettes'), required for beta-1,4-glucan microfibril crystallization, a major mechanism of the cell wall formation.


ensembl_gene_id: Q6YVM7
symbol: Q6YVM7_ORYSJ
gene_biotype: protein_coding
description:
  Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog; Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins.


ensembl_gene_id: Q6YVX4
symbol: OsJ_006938
gene_biotype: protein_coding
description:
  Molybdopterin synthase sulfur carrier subunit; Acts as a sulfur carrier required for molybdopterin biosynthesis. Component of the molybdopterin synthase complex that catalyzes the conversion of precursor Z into molybdopterin by mediating the incorporation of 2 sulfur atoms into precursor Z to generate a dithiolene group. In the complex, serves as sulfur donor by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. After interaction with MOCS2B, the sulfur is then transferred to precursor Z to form molybdopterin.


ensembl_gene_id: Q6YVX7
symbol: RR2
gene_biotype: protein_coding
description:
  Two-component response regulator ORR2; Functions as response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Type-A response regulators seem to act as negative regulators of the cytokinin signaling. Belongs to the ARR family. Type-A subfamily.


ensembl_gene_id: Q6YVY0
symbol: ARF7
gene_biotype: protein_coding
description:
  Auxin response factor 7; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).


ensembl_gene_id: Q6YVY8
symbol: Q6YVY8_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J013134N21, full insert sequence; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q6YW46
symbol: B1131G07.11
gene_biotype: protein_coding
description:
  Elongation factor 1-gamma 2; Probably plays a role in anchoring the complex to other cellular components.


ensembl_gene_id: Q6YW48
symbol: CGA1
gene_biotype: protein_coding
description:
  Protein CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR 1; Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters (By similarity). Influences the expression of nuclear encoded chloroplast-targeted genes. Regulates chloroplast development and promotes chlorophyll accumulation. Modulates plant architecture (e.g. height, length and width of leaf blades, and flowering tillers production) and represses tillering, probably by modulating number of cells. Promotes senescence. Involved in grain filling, panicle development and starch production.


ensembl_gene_id: Q6YW50
symbol: CKX7
gene_biotype: protein_coding
description:
  Cytokinin dehydrogenase 7; Catalyzes the oxidation of cytokinins, a family of N(6)- substituted adenine derivatives that are plant hormones, where the substituent is an isopentenyl group.


ensembl_gene_id: Q6YW51
symbol: CKX6
gene_biotype: protein_coding
description:
  Cytokinin dehydrogenase 6; Catalyzes the oxidation of cytokinins, a family of N(6)- substituted adenine derivatives that are plant hormones, where the substituent is an isopentenyl group.


ensembl_gene_id: Q6YW62
symbol: ABCG44
gene_biotype: protein_coding
description:
  ABC transporter G family member 44; May be a general defense protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.


ensembl_gene_id: Q6YWF1
symbol: GAP1
gene_biotype: protein_coding
description:
  GTPase activating protein 1; Mediates the transient calcium-dependent interaction of PYR/PYL/RCAR abscisic acid (ABA) receptors with the plasma membrane and thus regulates ABA sensitivity (By similarity). Stimulates the GTPase/ATPase activities of YCHF1, and regulates its subcellular localization. Binds phospholipids in a Ca(2+)-independent manner. Promotes tolerance towards salinity stress by limiting the accumulation of reactive oxygen species (ROS). Promotes resistance to bacterial pathogens, such as Xanthomonas oryzae pv. oryzae and Pseudomonas syringae pv. tomato strain DC3000. Bi [...]


ensembl_gene_id: Q6YWK8
symbol: CSLA11
gene_biotype: protein_coding
description:
  Probable glucomannan 4-beta-mannosyltransferase 11; Probable mannan synthase which consists of a 4-beta- mannosyltransferase activity on mannan using GDP-mannose. The beta-1,4- mannan product is the backbone for galactomannan synthesis by galactomannan galactosyltransferase. Galactomannan is a noncellulosic polysaccharides of plant cell wall.


