# geneInfo

ensembl_gene_id: A0A0N7KCB8
symbol: A0A0N7KCB8
gene_biotype: protein_coding
description:
  Glycosyltransferases; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls; Belongs to the glycosyltransferase 43 family.


ensembl_gene_id: A0A0N7KE80
symbol: A0A0N7KE80
gene_biotype: protein_coding
description:
  Pectin acetylesterase; Hydrolyzes acetyl esters in homogalacturonan regions of pectin. In type I primary cell wall, galacturonic acid residues of pectin can be acetylated at the O-2 and O-3 positions. Decreasing the degree of acetylation of pectin gels in vitro alters their physical properties; Belongs to the pectinacetylesterase family.


ensembl_gene_id: A0A0N7KEN5
symbol: A0A0N7KEN5
gene_biotype: protein_coding
description:
  Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family.


ensembl_gene_id: A0A0N7KF66
symbol: A0A0N7KF66
gene_biotype: protein_coding
description:
  Os02g0318450 protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.


ensembl_gene_id: A0A0N7KG11
symbol: A0A0N7KG11
gene_biotype: protein_coding
description:
  Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.


ensembl_gene_id: A0A0N7KI91
symbol: A0A0N7KI91
gene_biotype: protein_coding
description:
  Methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Erg6/SMT family.


ensembl_gene_id: A0A0N7KIX5
symbol: A0A0N7KIX5
gene_biotype: protein_coding
description:
  Probable magnesium transporter; Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+) and Co(2+) but to a much less extent than Mg(2+).


ensembl_gene_id: A0A0N7KIY3
symbol: BHLH156
gene_biotype: protein_coding
description:
  Transcription factor BHLH156; Transcription factor involved in positive regulation of genes involved in strategy II iron acquisition, including genes for mugineic acid (MA) family phytosiderophores biosynthesis, and genes involved in S-adenosylmethionine cycle and iron transport. May play a role in the regulation of iron deficiency response by promoting the nuclear localization of IRO2. Possesses transactivation activity in yeast. Belongs to the bHLH protein family.


ensembl_gene_id: A0A0N7KJA0
symbol: A0A0N7KJA0
gene_biotype: protein_coding
description:
  Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.


ensembl_gene_id: A0A0N7KJT8
symbol: AP2-5
gene_biotype: protein_coding
description:
  APETALA2-like protein 5; Transcription factor. Involved in spikelet transition and development (Probable). Prevents lemma and palea elongation as well as grain growth. Required for seed shattering through specifying abscission zone (AZ) development.


ensembl_gene_id: A0A0N7KK39
symbol: A0A0N7KK39
gene_biotype: protein_coding
description:
  Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.


ensembl_gene_id: A0A0N7KLL1
symbol: A0A0N7KLL1
gene_biotype: protein_coding
description:
  Receptor-like serine/threonine-protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: A0A0N7KMH0
symbol: AP2-4
gene_biotype: protein_coding
description:
  APETALA2-like protein 4; Probable transcription factor (By similarity). Involved in spikelet transition (Probable). Prevents lemma and palea elongation as well as grain growth.


ensembl_gene_id: A0A0N7KMW2
symbol: A0A0N7KMW2
gene_biotype: protein_coding
description:
  Os07g0131200 protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: A0A0N7KN59
symbol: A0A0N7KN59
gene_biotype: protein_coding
description:
  Structure-specific endonuclease subunit SLX1 homolog; Catalytic subunit of a heterodimeric structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA; Belongs to the SLX1 family.


ensembl_gene_id: A0A0N7KP87
symbol: A0A0N7KP87
gene_biotype: protein_coding
description:
  Mediator of RNA polymerase II transcription subunit 21; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.


ensembl_gene_id: A0A0N7KPI2
symbol: A0A0N7KPI2
gene_biotype: protein_coding
description:
  Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family.


ensembl_gene_id: A0A0N7KSB1
symbol: A0A0N7KSB1
gene_biotype: protein_coding
description:
  Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Belongs to the ferritin family.


ensembl_gene_id: A0A0N7KTN7
symbol: A0A0N7KTN7
gene_biotype: protein_coding
description:
  Os12g0178700 protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.


ensembl_gene_id: A0A0P0UX31
symbol: A0A0P0UX31
gene_biotype: protein_coding
description:
  Os01g0105400 protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.


ensembl_gene_id: A0A0P0UY20
symbol: A0A0P0UY20
gene_biotype: protein_coding
description:
  Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors  [...]


ensembl_gene_id: A0A0P0UY23
symbol: A0A0P0UY23
gene_biotype: protein_coding
description:
  E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.


ensembl_gene_id: A0A0P0V0Z2
symbol: A0A0P0V0Z2
gene_biotype: protein_coding
description:
  Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.


ensembl_gene_id: A0A0P0V1A9
symbol: A0A0P0V1A9
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: A0A0P0V1R2
symbol: A0A0P0V1R2
gene_biotype: protein_coding
description:
  Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.


ensembl_gene_id: A0A0P0V282
symbol: A0A0P0V282
gene_biotype: protein_coding
description:
  Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.


ensembl_gene_id: A0A0P0V2L0
symbol: A0A0P0V2L0
gene_biotype: protein_coding
description:
  rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.


ensembl_gene_id: A0A0P0V363
symbol: A0A0P0V363
gene_biotype: protein_coding
description:
  Acyl-[acyl-carrier-protein] hydrolase; Plays an essential role in chain termination during de novo fatty acid synthesis; Belongs to the acyl-ACP thioesterase family.


ensembl_gene_id: A0A0P0V4R0
symbol: RTEL1
gene_biotype: protein_coding
description:
  Regulator of telomere elongation helicase 1 homolog; ATP-dependent DNA helicase implicated in DNA replication, DNA repair and the maintenance of genomic stability. Acts as an anti- recombinase to counteract toxic recombination and limit crossover during meiosis. Regulates meiotic recombination and crossover homeostasis by physically dissociating strand invasion events and thereby promotes noncrossover repair by meiotic synthesis dependent strand annealing (SDSA) as well as disassembly of D loop recombination intermediates.


ensembl_gene_id: A0A0P0V4X3
symbol: A0A0P0V4X3
gene_biotype: protein_coding
description:
  Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.


ensembl_gene_id: A0A0P0V598
symbol: A0A0P0V598
gene_biotype: protein_coding
description:
  Os01g0612000 protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.


ensembl_gene_id: A0A0P0V5B4
symbol: A0A0P0V5B4
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.


ensembl_gene_id: A0A0P0V5Q2
symbol: A0A0P0V5Q2
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins.


ensembl_gene_id: A0A0P0V5S4
symbol: A0A0P0V5S4
gene_biotype: protein_coding
description:
  Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.


ensembl_gene_id: A0A0P0V5U9
symbol: YUCCA1
gene_biotype: protein_coding
description:
  Indole-3-pyruvate monooxygenase YUCCA1; Involved in auxin biosynthesis. Converts the indole-3-pyruvic acid (IPA) produced by the TAA family to indole-3-acetic acid (IAA) (Probable). Functions downstream of TAR2 in auxin biosynthesis. Functions upstream of WOX11, a transcription factor that promotes the development of crown roots ; Belongs to the FMO family.


ensembl_gene_id: A0A0P0V678
symbol: A0A0P0V678
gene_biotype: protein_coding
description:
  Protein VACUOLELESS1; Required for vacuole biogenesis and vacuole enlargment in dividing and expanding cells. Involved in the docking or fusion of prevacuolar vesicles; Belongs to the VPS16 family.


ensembl_gene_id: A0A0P0V6L3
symbol: A0A0P0V6L3
gene_biotype: protein_coding
description:
  Os01g0681100 protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.


ensembl_gene_id: A0A0P0V7B9
symbol: A0A0P0V7B9
gene_biotype: protein_coding
description:
  KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.


ensembl_gene_id: A0A0P0V8W2
symbol: A0A0P0V8W2
gene_biotype: protein_coding
description:
  Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase; Bifunctional inositol kinase that acts in concert with the IP6K kinases IP6K1, IP6K2 and IP6K3 to synthesize the diphosphate group-containing inositol pyrophosphates diphosphoinositol pentakisphosphate, PP-InsP5, and bis-diphosphoinositol tetrakisphosphate, (PP)2-InsP4. PP-InsP5 and (PP)2-InsP4, also respectively called InsP7 and InsP8, regulate a variety of cellular processes, including apoptosis, vesicle trafficking, cytoskeletal dynamics, exocytosis, insulin signaling and neutrophil activation. Phosphorylates  [...]


ensembl_gene_id: A0A0P0VC63
symbol: A0A0P0VC63
gene_biotype: protein_coding
description:
  Os01g0920300 protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: A0A0P0VD80
symbol: A0A0P0VD80
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: A0A0P0VDA3
symbol: A0A0P0VDA3
gene_biotype: protein_coding
description:
  Os01g0966900 protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: A0A0P0VFR4
symbol: A0A0P0VFR4
gene_biotype: protein_coding
description:
  Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.


ensembl_gene_id: A0A0P0VFZ5
symbol: A0A0P0VFZ5
gene_biotype: protein_coding
description:
  Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.


ensembl_gene_id: A0A0P0VHE0
symbol: A0A0P0VHE0
gene_biotype: protein_coding
description:
  Expansin; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Belongs to the expansin family. Expansin A subfamily.


ensembl_gene_id: A0A0P0VI36
symbol: NAAT1
gene_biotype: protein_coding
description:
  Nicotianamine aminotransferase 1; Involved in biosynthesis of mugineic acid family phytosiderophores, which are ferric iron chelators produced in graminaceous plants in response to iron deficiency. Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: A0A0P0VJF3
symbol: A0A0P0VJF3
gene_biotype: protein_coding
description:
  DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.


ensembl_gene_id: A0A0P0VJP8
symbol: A0A0P0VJP8
gene_biotype: protein_coding
description:
  Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.


ensembl_gene_id: A0A0P0VLJ4
symbol: A0A0P0VLJ4
gene_biotype: protein_coding
description:
  GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.


ensembl_gene_id: A0A0P0VP26
symbol: A0A0P0VP26
gene_biotype: protein_coding
description:
  Os02g0724600 protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: A0A0P0VQP6
symbol: A0A0P0VQP6
gene_biotype: protein_coding
description:
  Plasma membrane ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily.


ensembl_gene_id: A0A0P0VQQ7
symbol: A0A0P0VQQ7
gene_biotype: protein_coding
description:
  Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA.


ensembl_gene_id: A0A0P0VUY4
symbol: CMT1
gene_biotype: protein_coding
description:
  DNA (cytosine-5)-methyltransferase CMT1; Involved in CpXpG DNA methylation (By similarity). May not play a major role in maintaining CpXpG methylation (Probable). Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.


ensembl_gene_id: A0A0P0VX85
symbol: A0A0P0VX85
gene_biotype: protein_coding
description:
  Os03g0338000 protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: A0A0P0VXU6
symbol: A0A0P0VXU6
gene_biotype: protein_coding
description:
  Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue; Belongs to the peroxidase family.


ensembl_gene_id: A0A0P0W1E6
symbol: A0A0P0W1E6
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: A0A0P0W399
symbol: A0A0P0W399
gene_biotype: protein_coding
description:
  Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: A0A0P0W699
symbol: A0A0P0W699
gene_biotype: protein_coding
description:
  Os04g0129900 protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.


ensembl_gene_id: A0A0P0W7K1
symbol: A0A0P0W7K1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: A0A0P0W9A2
symbol: A0A0P0W9A2
gene_biotype: protein_coding
description:
  Os04g0381000 protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.


ensembl_gene_id: A0A0P0WAY2
symbol: A0A0P0WAY2
gene_biotype: protein_coding
description:
  Os04g0452600 protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: A0A0P0WB92
symbol: A0A0P0WB92
gene_biotype: protein_coding
description:
  Os04g0453300 protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: A0A0P0WBQ2
symbol: A0A0P0WBQ2
gene_biotype: protein_coding
description:
  Os04g0467901 protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.


ensembl_gene_id: A0A0P0WFC8
symbol: TGAL6
gene_biotype: protein_coding
description:
  Transcription factor TGAL6; Transcriptional regulator involved in defense response. Belongs to the bZIP family.


ensembl_gene_id: A0A0P0WFD3
symbol: A0A0P0WFD3
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: A0A0P0WFU7
symbol: A0A0P0WFU7
gene_biotype: protein_coding
description:
  Bifunctional lysine-specific demethylase and histidyl-hydroxylase; Oxygenase that can act as both a histone lysine demethylase and a ribosomal histidine hydroxylase.


ensembl_gene_id: A0A0P0WGD2
symbol: A0A0P0WGD2
gene_biotype: protein_coding
description:
  Katanin p80 WD40 repeat-containing subunit B1 homolog; May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays; Belongs to the WD repeat KATNB1 family.


ensembl_gene_id: A0A0P0WGH5
symbol: A0A0P0WGH5
gene_biotype: protein_coding
description:
  Os04g0679000 protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: A0A0P0WGJ2
symbol: A0A0P0WGJ2
gene_biotype: protein_coding
description:
  Os04g0679050 protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: A0A0P0WGT0
symbol: A0A0P0WGT0
gene_biotype: protein_coding
description:
  Os04g0693050 protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.


ensembl_gene_id: A0A0P0WHK2
symbol: A0A0P0WHK2
gene_biotype: protein_coding
description:
  Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.


ensembl_gene_id: A0A0P0WHN0
symbol: A0A0P0WHN0
gene_biotype: protein_coding
description:
  Os05g0129100 protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: A0A0P0WHT3
symbol: A0A0P0WHT3
gene_biotype: protein_coding
description:
  DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family.


ensembl_gene_id: A0A0P0WIZ3
symbol: A0A0P0WIZ3
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: A0A0P0WM50
symbol: A0A0P0WM50
gene_biotype: protein_coding
description:
  Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.


ensembl_gene_id: A0A0P0WN18
symbol: A0A0P0WN18
gene_biotype: protein_coding
description:
  Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.


ensembl_gene_id: A0A0P0WNF9
symbol: A0A0P0WNF9
gene_biotype: protein_coding
description:
  Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.


ensembl_gene_id: A0A0P0WNP9
symbol: A0A0P0WNP9
gene_biotype: protein_coding
description:
  Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.


ensembl_gene_id: A0A0P0WPS3
symbol: A0A0P0WPS3
gene_biotype: protein_coding
description:
  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.


ensembl_gene_id: A0A0P0WQ90
symbol: LF
gene_biotype: protein_coding
description:
  Transcription factor LATE FLOWERING; Transcription factor involved in the negative regulation of flowering. May be involved in the repression of the flowering factor GI and HD1 by interacting with PIL13 and PIL15 and competing with PRR1. Possesses transactivation activity in yeast. Belongs to the bHLH protein family.


ensembl_gene_id: A0A0P0WT89
symbol: A0A0P0WT89
gene_biotype: protein_coding
description:
  Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.


ensembl_gene_id: A0A0P0WY03
symbol: DGAT1-2
gene_biotype: protein_coding
description:
  Diacylglycerol O-acyltransferase 1-2; Involved in triacylglycerol (TAG) synthesis. Catalyzes the acylation of the sn-3 hydroxy group of sn-1,2-diacylglycerol using acyl-CoA; Belongs to the membrane-bound acyltransferase family. Sterol o-acyltransferase subfamily.


ensembl_gene_id: A0A0P0WZL3
symbol: A0A0P0WZL3
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: A0A0P0WZZ1
symbol: A0A0P0WZZ1
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.


ensembl_gene_id: A0A0P0X004
symbol: HMA9
gene_biotype: protein_coding
description:
  Cation-transporting ATPase HMA5; Metal efflux transporter that may play a role in detoxification of heavy metals, such as zinc, copper, lead and cadmium, especially in the shoots.


ensembl_gene_id: A0A0P0X4G4
symbol: A0A0P0X4G4
gene_biotype: protein_coding
description:
  Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: A0A0P0X5N4
symbol: A0A0P0X5N4
gene_biotype: protein_coding
description:
  Os07g0463600 protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.


ensembl_gene_id: A0A0P0X5R2
symbol: A0A0P0X5R2
gene_biotype: protein_coding
description:
  Protein RFT1 homolog; May be involved in N-linked oligosaccharide assembly. Belongs to the RFT1 family.


ensembl_gene_id: A0A0P0X625
symbol: A0A0P0X625
gene_biotype: protein_coding
description:
  Os07g0462800 protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.


ensembl_gene_id: A0A0P0X6F9
symbol: A0A0P0X6F9
gene_biotype: protein_coding
description:
  Eukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.


ensembl_gene_id: A0A0P0X7V4
symbol: A0A0P0X7V4
gene_biotype: protein_coding
description:
  Os07g0582500 protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: A0A0P0XB70
symbol: MAGO1
gene_biotype: protein_coding
description:
  Protein mago nashi homolog 1; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the core components remain bound to spliced mRNAs throughout all stages of mRNA metabolism thereby in [...]


ensembl_gene_id: A0A0P0XCJ1
symbol: A0A0P0XCJ1
gene_biotype: protein_coding
description:
  Secretory carrier-associated membrane protein; Probably involved in membrane trafficking. Belongs to the SCAMP family.


ensembl_gene_id: A0A0P0XCU3
symbol: SSIIIA
gene_biotype: protein_coding
description:
  Soluble starch synthase 3a, chloroplastic/amyloplastic; Involved in starch synthesis in endosperm amyloplasts. Plays an important role in the elongation of amylopectin B chains.


ensembl_gene_id: A0A0P0XF65
symbol: A0A0P0XF65
gene_biotype: protein_coding
description:
  4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.


ensembl_gene_id: A0A0P0XFL8
symbol: A0A0P0XFL8
gene_biotype: protein_coding
description:
  Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.


ensembl_gene_id: A0A0P0XGG0
symbol: A0A0P0XGG0
gene_biotype: protein_coding
description:
  Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.


ensembl_gene_id: A0A0P0XII1
symbol: CERK1
gene_biotype: protein_coding
description:
  Chitin elicitor receptor kinase 1; Lysin motif (LysM) receptor kinase required as a cell surface receptor for chitin elicitor (chitooligosaccharides) signaling leading to innate immunity in response to biotic stresses. Involved in the resistance to pathogenic fungi, probably by sensing microbe-associated molecular patterns (MAMP) and pathogen-associated molecular patterns (PAMP). Involved in the detection of microbial peptidoglycans (PGNs) and mediates PGN response. Plays dual roles in PGN and chitin signaling during innate immunity. Acts as an adapter for LYP4 and LYP6 and mediates si [...]


ensembl_gene_id: A0A0P0XIX0
symbol: A0A0P0XIX0
gene_biotype: protein_coding
description:
  Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).


ensembl_gene_id: A0A0P0XJS0
symbol: A0A0P0XJS0
gene_biotype: protein_coding
description:
  Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).


ensembl_gene_id: A0A0P0XKF5
symbol: A0A0P0XKF5
gene_biotype: protein_coding
description:
  Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.


ensembl_gene_id: A0A0P0XKW0
symbol: A0A0P0XKW0
gene_biotype: protein_coding
description:
  Os09g0297300 protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: A0A0P0XL64
symbol: PFP-ALPHA
gene_biotype: protein_coding
description:
  Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha; Regulatory subunit of pyrophosphate--fructose 6-phosphate 1- phosphotransferase.


ensembl_gene_id: A0A0P0XLR2
symbol: A0A0P0XLR2
gene_biotype: protein_coding
description:
  Os09g0332300 protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.


ensembl_gene_id: A0A0P0XLY5
symbol: A0A0P0XLY5
gene_biotype: protein_coding
description:
  Glutamate receptor; Glutamate-gated receptor that probably acts as non-selective cation channel; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.


ensembl_gene_id: A0A0P0XM10
symbol: PAO6
gene_biotype: protein_coding
description:
  Polyamine oxidase 6; Flavoenzyme involved in polyamine back-conversion (By similarity). Catalyzes the oxidation of the secondary amino group of polyamines, such as spermine and spermidine (By similarity).


ensembl_gene_id: A0A0P0XML3
symbol: A0A0P0XML3
gene_biotype: protein_coding
description:
  Os09g0452300 protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: A0A0P0XNN0
symbol: A0A0P0XNN0
gene_biotype: protein_coding
description:
  Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.


ensembl_gene_id: A0A0P0XPW4
symbol: A0A0P0XPW4
gene_biotype: protein_coding
description:
  Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin.


ensembl_gene_id: A0A0P0XQU3
symbol: A0A0P0XQU3
gene_biotype: protein_coding
description:
  Vacuolar protein sorting-associated protein; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.


ensembl_gene_id: A0A0P0XTT3
symbol: A0A0P0XTT3
gene_biotype: protein_coding
description:
  ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: A0A0P0XXH0
symbol: A0A0P0XXH0
gene_biotype: protein_coding
description:
  Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: A0A0P0Y1E1
symbol: A0A0P0Y1E1
gene_biotype: protein_coding
description:
  Os11g0296900 protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Erg6/SMT family.


ensembl_gene_id: A0A0P0Y1P5
symbol: A0A0P0Y1P5
gene_biotype: protein_coding
description:
  Os11g0304050 protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.


ensembl_gene_id: A0A0P0Y3Q5
symbol: A0A0P0Y3Q5
gene_biotype: protein_coding
description:
  Os11g0581000 protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.


ensembl_gene_id: A0A0P0Y4S0
symbol: A0A0P0Y4S0
gene_biotype: protein_coding
description:
  Os11g0637100 protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: A0A0P0Y5W0
symbol: A0A0P0Y5W0
gene_biotype: protein_coding
description:
  Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.


ensembl_gene_id: A0A0P0Y7X4
symbol: A0A0P0Y7X4
gene_biotype: protein_coding
description:
  Os12g0202700 protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.


ensembl_gene_id: A0A0P0Y801
symbol: A0A0P0Y801
gene_biotype: protein_coding
description:
  Os12g0199500 protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.


ensembl_gene_id: A0A0P0Y8N9
symbol: A0A0P0Y8N9
gene_biotype: protein_coding
description:
  Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family.


ensembl_gene_id: A0A0P0Y9M0
symbol: A0A0P0Y9M0
gene_biotype: protein_coding
description:
  Os12g0441600 protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.


ensembl_gene_id: A0A0P0Y9N9
symbol: A0A0P0Y9N9
gene_biotype: protein_coding
description:
  Os12g0444800 protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.


ensembl_gene_id: A0A0P0YAE3
symbol: A0A0P0YAE3
gene_biotype: protein_coding
description:
  Photosystem II reaction center protein Z; Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna.


ensembl_gene_id: A0A0P0YCB1
symbol: A0A0P0YCB1
gene_biotype: protein_coding
description:
  Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).


ensembl_gene_id: A0MH06
symbol: FON2
gene_biotype: protein_coding
description:
  Protein FLORAL ORGAN NUMBER2; Probable extracellular signal that regulates meristem maintenance. May function as a putative ligand for a receptor complex including FON1. Regulates the size of the floral meristem and the number of floral organs.


ensembl_gene_id: A1A696
symbol: HK3
gene_biotype: protein_coding
description:
  Probable histidine kinase 3; Cytokinin receptor related to bacterial two-component regulators. Functions as a histidine kinase and transmits the stress signal to a downstream MAPK cascade.


ensembl_gene_id: A1A697
symbol: HK5
gene_biotype: protein_coding
description:
  Probable histidine kinase 5; Cytokinin receptor related to bacterial two-component regulators. Functions as a histidine kinase and transmits the stress signal to a downstream MAPK cascade.


ensembl_gene_id: A1A698
symbol: HK4
gene_biotype: protein_coding
description:
  Probable histidine kinase 4; Cytokinin receptor related to bacterial two-component regulators. Functions as a histidine kinase and transmits the stress signal to a downstream MAPK cascade.


ensembl_gene_id: A1A699
symbol: HK6
gene_biotype: protein_coding
description:
  Probable histidine kinase 6; Cytokinin receptor related to bacterial two-component regulators. Functions as a histidine kinase and transmits the stress signal to a downstream MAPK cascade.


ensembl_gene_id: A1L4T4
symbol: ARD1
gene_biotype: protein_coding
description:
  1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene).


ensembl_gene_id: A1YTM8
symbol: MT3A
gene_biotype: protein_coding
description:
  Metallothionein-like protein 3A; Metallothioneins have a high content of cysteine residues that bind various heavy metals; Belongs to the metallothionein superfamily. Type 15 family.


ensembl_gene_id: A2CIR7
symbol: NPR5
gene_biotype: protein_coding
description:
  BTB/POZ domain and ankyrin repeat-containing protein NPR5; Involved in defense response against pathogens.


ensembl_gene_id: A2ZNT5
symbol: LPR5
gene_biotype: protein_coding
description:
  Multicopper oxidase LPR1 homolog 5; Multicopper oxidase that may play a role in the maintenance of inorganic phosphate homeostasis.


ensembl_gene_id: A2ZRG4
symbol: KIN14B
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-14B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-14 subfamily.


ensembl_gene_id: A2ZRY8
symbol: IAA4
gene_biotype: protein_coding
description:
  Auxin-responsive protein IAA4; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations; Belongs to the Aux/IAA family.


ensembl_gene_id: A2ZU80
symbol: NRT2.4
gene_biotype: protein_coding
description:
  Probable high-affinity nitrate transporter 2.4; Involved in nitrate transport; Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family.


ensembl_gene_id: A2ZVG7
symbol: FTSH9
gene_biotype: protein_coding
description:
  ATP-dependent zinc metalloprotease FTSH 9, chloroplastic/mitochondrial; Probable ATP-dependent zinc metallopeptidase; In the C-terminal section; belongs to the peptidase M41 family.


ensembl_gene_id: A2ZVI7
symbol: CPK1
gene_biotype: protein_coding
description:
  Calcium-dependent protein kinase 1; May play a role in signal transduction pathways that involve calcium as a second messenger.


ensembl_gene_id: A2ZW16
symbol: OsJ_02836
gene_biotype: protein_coding
description:
  Phospholipase A1-II 1; Acylhydrolase that catalyzes the hydrolysis of phospholipids at the sn-1 position; Belongs to the AB hydrolase superfamily. Lipase family.


ensembl_gene_id: A2ZX50
symbol: NAP1;3
gene_biotype: protein_coding
description:
  Nucleosome assembly protein 1;3; May modulate chromatin structure by regulation of nucleosome assembly/disassembly.


ensembl_gene_id: A2ZX97
symbol: OsJ_03266
gene_biotype: protein_coding
description:
  Potassium channel KAT6; Probable inward-rectifying potassium channel. Assuming opened or closed conformations in response to the voltage difference across the membrane, the channel is activated by hyperpolarization (By similarity); Belongs to the potassium channel family. Plant (TC 1.A.1.4) subfamily.


ensembl_gene_id: A3A2Z8
symbol: SPL3
gene_biotype: protein_coding
description:
  Squamosa promoter-binding-like protein 3; Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May be involved in panicle development.


ensembl_gene_id: A3A871
symbol: CYP71Z6
gene_biotype: protein_coding
description:
  Ent-isokaurene C2/C3-hydroxylase; Enzyme of the diterpenoid metabolism involved in the biosynthesis of antibacterial oryzalides such as phytocassane.


ensembl_gene_id: A3A901
symbol: A3A901_ORYSJ
gene_biotype: protein_coding
description:
  Phosphatidyl-N-methylethanolamine N-methyltransferase; Catalyzes the second two steps of the methylation pathway of phosphatidylcholine biosynthesis, the SAM-dependent methylation of phosphatidylmonomethylethanolamine (PMME) to phosphatidyldimethylethanolamine (PDME) and of PDME to phosphatidylcholine (PC).


ensembl_gene_id: A3A9H6
symbol: OJ1112_G03.14
gene_biotype: protein_coding
description:
  Probable ascorbate-specific transmembrane electron transporter 1; Two-heme-containing cytochrome. Catalyzes ascorbate-dependent trans-membrane electron transfer by utilizing a concerted H(+)/e(-) transfer mechanism (By similarity).


ensembl_gene_id: A3ABE1
symbol: OsJ_08397
gene_biotype: protein_coding
description:
  Pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic; Involved in the biogenesis of the plastid translation machinery by promoting the splicing of group II introns in chloroplasts; Belongs to the PPR family. P subfamily.


ensembl_gene_id: A3ACF3
symbol: MOCS3
gene_biotype: protein_coding
description:
  Adenylyltransferase and sulfurtransferase MOCS3; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers URM1 and MOCS2A. Its N-terminus first activates URM1 and MOCS2A as acyl- adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 and MOCS2A to form thiocarboxylation (- COSH) of their C-terminus. The reaction probably involves hydrogen sulfide [...]


ensembl_gene_id: A3ADI5
symbol: A3ADI5_ORYSJ
gene_biotype: protein_coding
description:
  3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.


ensembl_gene_id: A3AF13
symbol: UBP26
gene_biotype: protein_coding
description:
  Ubiquitin carboxyl-terminal hydrolase 26; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Deubiquitinates H2BK143ub1 of histone H2B (By similarity).


ensembl_gene_id: A3AGM4
symbol: H2B1
gene_biotype: protein_coding
description:
  Histone H2B.1; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.


ensembl_gene_id: A3AHG5
symbol: LEA17
gene_biotype: protein_coding
description:
  Late embryogenesis abundant protein 17; Involved in abiotic stress responses. May function as chaperone and contribute to prevent the formation of damaging protein aggregates.


ensembl_gene_id: A3ANB5
symbol: ARP7
gene_biotype: protein_coding
description:
  Actin-related protein 7; Essential protein required during embryogenesis and all plant development stages, probably through a chromatin-mediated regulation of gene expression; Belongs to the actin family. Plant ARP7 subfamily.


ensembl_gene_id: A3AVH5
symbol: OsJ_014797
gene_biotype: protein_coding
description:
  DEAD-box ATP-dependent RNA helicase 13; Belongs to the DEAD box helicase family. DDX24/MAK5 subfamily.


ensembl_gene_id: A3AVP1
symbol: CKX8
gene_biotype: protein_coding
description:
  Cytokinin dehydrogenase 8; Catalyzes the oxidation of cytokinins, a family of N(6)- substituted adenine derivatives that are plant hormones, where the substituent is an isopentenyl group.


ensembl_gene_id: A3AWA4
symbol: HMA5
gene_biotype: protein_coding
description:
  Copper-transporting ATPase HMA5; Copper (Cu) transporter that plays an essential role in promoting translocation of Cu from roots to shoots. Involved in loading Cu to the xylem of the roots and other organs, including panicles. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.


ensembl_gene_id: A3AYR1
symbol: ACBP4
gene_biotype: protein_coding
description:
  Acyl-CoA-binding domain-containing protein 4; Binds medium- and long-chain acyl-CoA esters with high affinity. Can interact in vitro with palmitoyl-CoA, linoleoyl-CoA and linolenoyl-CoA. Binds phosphatidic acid (PA) and phosphatidylcholine (PC) in vitro. May play a role in the biosynthesis of phospholipids ; Belongs to the ACBP family.


ensembl_gene_id: A3AZ88
symbol: MT2C
gene_biotype: protein_coding
description:
  Metallothionein-like protein 2C; Metallothioneins have a high content of cysteine residues that bind various heavy metals (Probable). Acts as reactive oxygen species (ROS) scavenger in the cytosol. Possesses superoxide anion and hydroxyl radical scavenging activities in vitro. Plays a role during root development, lateral root initiation and seed embryo germination, possibly by regulating levels of cytokinin ; Belongs to the metallothionein superfamily. Type 15 family.


ensembl_gene_id: A3B0Y1
symbol: MT3B
gene_biotype: protein_coding
description:
  Metallothionein-like protein 3B; Metallothioneins have a high content of cysteine residues that bind various heavy metals; Belongs to the metallothionein superfamily. Type 15 family.


ensembl_gene_id: A3B529
symbol: CIPK28
gene_biotype: protein_coding
description:
  CBL-interacting protein kinase 28; CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity); Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.


ensembl_gene_id: A3B6V0
symbol: WOX12
gene_biotype: protein_coding
description:
  WUSCHEL-related homeobox 12; Transcription factor which may be involved in developmental processes; Belongs to the WUS homeobox family.


ensembl_gene_id: A3B9A0
symbol: ARF16
gene_biotype: protein_coding
description:
  Auxin response factor 16; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).


ensembl_gene_id: A3BDI8
symbol: SAP8
gene_biotype: protein_coding
description:
  Zinc finger A20 and AN1 domain-containing stress-associated protein 8; May be involved in environmental stress response.


ensembl_gene_id: A3BE68
symbol: HK1
gene_biotype: protein_coding
description:
  Probable histidine kinase 1; Cytokinin receptor related to bacterial two-component regulators. Functions as a histidine kinase and transmits the stress signal to a downstream MAPK cascade.


ensembl_gene_id: A3BF39
symbol: HMA2
gene_biotype: protein_coding
description:
  Cadmium/zinc-transporting ATPase HMA2; Zinc/cadmium transporter that plays an essential role in promoting translocation of zinc and cadmium from roots to shoots. May control cadmium loading into xylem. In roots, transports zinc and cadmium from the apoplast to the symplast to facilitate translocation via the phloem. In nodes, functions to load zinc and cadmium to the phloem for the preferential distribution to the upper nodes and panicles. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.


ensembl_gene_id: A3BFT0
symbol: KIN14N
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-14N; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-14 subfamily.


ensembl_gene_id: A3BH85
symbol: ARF20
gene_biotype: protein_coding
description:
  Putative auxin response factor 20; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).


ensembl_gene_id: A3BI11
symbol: ZIP8
gene_biotype: protein_coding
description:
  Zinc transporter 8; Zinc transporter that may mediate zinc uptake from the rhizosphere and may be responsible for the translocation of zinc within the plant.


ensembl_gene_id: A3BJI2
symbol: A3BJI2_ORYSJ
gene_biotype: protein_coding
description:
  Os07g0464200 protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.


ensembl_gene_id: A3BKF2
symbol: LTD
gene_biotype: protein_coding
description:
  Protein LHCP TRANSLOCATION DEFECT; Involved in the import of light-harvesting complex proteins (LHCP) and subsequent routing of these proteins to the chloroplast signal recognition particle (SRP) pathway.


ensembl_gene_id: A3BKM2
symbol: WOX13
gene_biotype: protein_coding
description:
  WUSCHEL-related homeobox 13; Transcription factor which may be involved in developmental processes; Belongs to the WUS homeobox family.


ensembl_gene_id: A3BLC3
symbol: OJ1121_A05.3
gene_biotype: protein_coding
description:
  Ribosome-recycling factor, chloroplastic; Responsible for the release of ribosomes from messenger RNA at the termination of chloroplastic protein biosynthesis.


ensembl_gene_id: A3BMN9
symbol: PRMT3
gene_biotype: protein_coding
description:
  Probable protein arginine N-methyltransferase 3; Methylates (mono and asymmetric dimethylation) the guanidino nitrogens of arginyl residues in some proteins.


ensembl_gene_id: A3BMZ5
symbol: BGLU26
gene_biotype: protein_coding
description:
  Beta-glucosidase 26; Hydrolyzes p-nitrophenyl beta-D-glucoside, p-nitrophenyl beta-D-mannoside, p-nitrophenyl beta-D-galactoside, p-nitrophenyl beta- D-xyloside, p-nitrophenyl beta-D-fucoside, p-nitrophenyl beta-L- arabinoside, cello-oligosaccharides, laminari-oligosaccharides and sophorose.


ensembl_gene_id: A3BPF2
symbol: ROC7
gene_biotype: protein_coding
description:
  Homeobox-leucine zipper protein ROC7; Probable transcription factor; Belongs to the HD-ZIP homeobox family. Class IV subfamily.


ensembl_gene_id: A3BT52
symbol: OsJ_026224
gene_biotype: protein_coding
description:
  DEAD-box ATP-dependent RNA helicase 29; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily.


ensembl_gene_id: A3BWJ9
symbol: SWEET7E
gene_biotype: protein_coding
description:
  Putative bidirectional sugar transporter SWEET7e; Mediates both low-affinity uptake and efflux of sugar across the plasma membrane.


ensembl_gene_id: A3BXL8
symbol: ABCG53
gene_biotype: protein_coding
description:
  ABC transporter G family member 53; May be a general defense protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.


ensembl_gene_id: A3C039
symbol: SAP1
gene_biotype: protein_coding
description:
  Zinc finger A20 and AN1 domain-containing stress-associated protein 1; May be involved in environmental stress response.


ensembl_gene_id: A3C057
symbol: SPL17
gene_biotype: protein_coding
description:
  Squamosa promoter-binding-like protein 17; Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May be involved in panicle development.


ensembl_gene_id: A3C4N5
symbol: PP2A4
gene_biotype: protein_coding
description:
  Serine/threonine-protein phosphatase PP2A-4 catalytic subunit; Belongs to the PPP phosphatase family. PP-2A subfamily.


ensembl_gene_id: A3C4S4
symbol: GME-1
gene_biotype: protein_coding
description:
  GDP-mannose 3,5-epimerase 1; Catalyzes a reversible epimerization of GDP-D-mannose that precedes the committed step in the biosynthesis of vitamin C (L- ascorbate), resulting in the hydrolysis of the highly energetic glycosyl-pyrophosphoryl linkage. Able to catalyze 2 distinct epimerization reactions and can release both GDP-L-galactose and GDP-L- gulose from GDP-mannose.


ensembl_gene_id: A3C6D7
symbol: ACT2
gene_biotype: protein_coding
description:
  Actin-2; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells; Belongs to the actin family.


ensembl_gene_id: A3C6G9
symbol: GDCSH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein, mitochondrial; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein (By similarity); Belongs to the GcvH family.


ensembl_gene_id: A3C7K0
symbol: A3C7K0_ORYSJ
gene_biotype: protein_coding
description:
  cDNA, clone: J065167G16, full insert sequence; Belongs to the mitochondrial carrier (TC 2.A.29) family.


ensembl_gene_id: A3CH16
symbol: A3CH16_ORYSJ
gene_biotype: protein_coding
description:
  Os12g0445300 protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.


ensembl_gene_id: A4KAG8
symbol: KSL6
gene_biotype: protein_coding
description:
  Ent-isokaur-15-ene synthase; Catalyzes the conversion of ent-copalyl diphosphate to the phytoalexin precursor ent-isokaur-15-ene; Belongs to the terpene synthase family.


ensembl_gene_id: A4LBC0
symbol: LFL1
gene_biotype: protein_coding
description:
  B3 domain-containing protein LFL1; Transcription repressor involved in flowering time regulation. Represses the flowering activator EHD1 by binding specifically to the DNA sequence 5'-CATGCATG-3 of its promoter.


ensembl_gene_id: A5HEI2
symbol: pinA
gene_biotype: protein_coding
description:
  cDNA clone:001-035-D09, full insert sequence; Belongs to the Bowman-Birk serine protease inhibitor family.


ensembl_gene_id: A6BLW4
symbol: NFYC2
gene_biotype: protein_coding
description:
  Nuclear transcription factor Y subunit C-2; Probable transcription factor involved in the regulation of flowering time under long day (LD) conditions. Functions as repressor of flowering, independently of HD1 and GHD7. Controls flowering time by negatively regulating the expression of EHD1 and HD3A. Component of the NF-Y/HAP transcription factor complex (By similarity); Belongs to the NFYC/HAP5 subunit family.


ensembl_gene_id: A7LFZ6
symbol: DCL4
gene_biotype: protein_coding
description:
  Endoribonuclease Dicer homolog 4; Involved in the RNA silencing pathway. Cleaves double- stranded RNA to produce small interfering RNAs (siRNAs) which target the selective destruction of complementary RNAs. Required for the production of 21 nucleotide siRNAs. Regulates shoot apical meristem (SAM) initiation and maintenance, leaf polarization and lemma polarity through the trans-acting siRNAS (ta-siRNAs) pathway, which probably modulate the expression of the ARF2, ARF3, ARF4, ARF14 and ARF15 genes. Can process endogenous 21 nucleotide siRNAs derived from an imperfect inverted repeat. Ma [...]


ensembl_gene_id: A9UGV5
symbol: AGPEP1
gene_biotype: protein_coding
description:
  Arabinogalactan peptide 1; Proteoglycan that seems to be implicated in diverse developmental roles such as differentiation, cell-cell recognition, embryogenesis and programmed cell death; Belongs to the AG-peptide AGP family.


ensembl_gene_id: A9UGV6
symbol: AGPEP2
gene_biotype: protein_coding
description:
  Arabinogalactan peptide 2; Proteoglycan that seems to be implicated in diverse developmental roles such as differentiation, cell-cell recognition, embryogenesis and programmed cell death; Belongs to the AG-peptide AGP family.


ensembl_gene_id: A9UGV7
symbol: AGPEP3
gene_biotype: protein_coding
description:
  Arabinogalactan peptide 3; Proteoglycan that seems to be implicated in diverse developmental roles such as differentiation, cell-cell recognition, embryogenesis and programmed cell death; Belongs to the AG-peptide AGP family.


ensembl_gene_id: A9XMT5
symbol: IPD3
gene_biotype: protein_coding
description:
  Protein CYCLOPS; Involved in arbuscular mycorrhizal (AM) symbiosis. Required for fungal infection in roots and arbuscule development during AM symbiosis.


ensembl_gene_id: B1B534
symbol: EHD2
gene_biotype: protein_coding
description:
  Protein EARLY HEADING DATE 2; Transcription activator that acts as a flowering master switch in both long and short days, independently of the circadian clock. Promotes flowering upstream of HD1 by up-regulating FTL1, FTL4, FTL5, FTL6, EHD1, HD3A and RFT1. Seems to repress FTL11 expression. May recognize the consensus motif 5'-TTTGTCGTAAT-3' in target gene promoters.


ensembl_gene_id: B1Q3J6
symbol: MET1B
gene_biotype: protein_coding
description:
  DNA (cytosine-5)-methyltransferase 1B; Major CG methylase that methylates chromatin CpG residues and maintains DNA methylation. Plays a major role in genomic imprinting, regulation of embryogenesis and seed viability. Maintains DNA methylation at the FIE1 gene locus in the embryo.


ensembl_gene_id: B2ZX90
symbol: FSM
gene_biotype: protein_coding
description:
  Chromatin assembly factor 1 subunit FSM; Component of the chromatin assembly factor complex (CAF-1) involved in chromatin assembly following DNA replication and DNA repair. Required for several aspects of development, including apical meristem maintenance by regulating the durations of the S- and G2- phases of the cell cycle through its chromatin assembly activity. Belongs to the CHAF1A family.


ensembl_gene_id: B4XT64
symbol: NAL1
gene_biotype: protein_coding
description:
  Protein NARROW LEAF 1; Involved in the regulation of lateral leaf growth. May be involved in the regulation of basipetal polar auxin transport (PAT) and vascular patterning in leaves. Controls photosynthesis rate by regulating carboxylation efficiency and consequently photosynthesis rate. Controls panicle and spikelet numbers, and grain yield.


ensembl_gene_id: B6DMK2
symbol: MER3
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase MER3 homolog; DNA helicase required for crossover formation, complete synapsis of homologous chromosomes and bivalent formation during meiosis. Is specific to recombination events resulting in interference- sensitive crossovers (class I meiotic crossover). Works cooperatively with ZIP4 to promote crossovers ; Belongs to the helicase family. SKI2 subfamily.


ensembl_gene_id: B6RGY0
symbol: PDF1A
gene_biotype: protein_coding
description:
  Peptide deformylase 1A, chloroplastic; Removes the formyl group from the N-terminal Met of newly synthesized proteins.


ensembl_gene_id: B6UV92
symbol: PSY3
gene_biotype: protein_coding
description:
  Phytoene synthase 3, chloroplastic; Catalyzes the conversion of geranylgeranyl diphosphate to phytoene. Mediates the first committed step in carotenoid biosynthesis. May play a role in regulating carotenoid flux in response to abiotic stress in roots. May control flux to carotenoid precursors that are required for abiotic stress-induced abscisic acid (ABA) formation in roots.


ensembl_gene_id: B7E4Q0
symbol: B7E4Q0_ORYSJ
gene_biotype: protein_coding
description:
  PRA1 family protein; May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments. Belongs to the PRA1 family.


ensembl_gene_id: B7E7M8
symbol: LOGL9
gene_biotype: protein_coding
description:
  Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL9; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms (By similarity).


ensembl_gene_id: B7E9D7
symbol: B7E9D7_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:001-125-E08, full insert sequence; Belongs to the Bowman-Birk serine protease inhibitor family.


ensembl_gene_id: B7EBN1
symbol: B7EBN1_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:001-044-E12, full insert sequence; Belongs to the mitochondrial carrier (TC 2.A.29) family.


ensembl_gene_id: B7EDK8
symbol: B7EDK8_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:001-043-E12, full insert sequence; Belongs to the iron/ascorbate-dependent oxidoreductase family.


ensembl_gene_id: B7EJ91
symbol: KIN5C
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-5C; Responsible for microtubule translocation. May be important for the organization of phragmoplast-specific arrays of microtubules (By similarity). Plays an essential role in stabilizing the mitotic spindle. Required during mitotic cytokinesis (By similarity). Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-5/BimC subfamily.


ensembl_gene_id: B7F138
symbol: VITH2_ORYSJ
gene_biotype: protein_coding
description:
  Vacuolar iron transporter homolog 2; Probable vacuolar iron transporter that may be involved in the regulation of iron distribution throughout the plant. Belongs to the CCC1 family.


ensembl_gene_id: B7F1G2
symbol: B7F1G2_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:002-146-E04, full insert sequence; Belongs to the iron/ascorbate-dependent oxidoreductase family.


ensembl_gene_id: B7F6I0
symbol: B7F6I0_ORYSJ
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: B7F7B9
symbol: SPS2
gene_biotype: protein_coding
description:
  Probable sucrose-phosphate synthase 2; Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP- glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation (By similarity); Belongs to the glycosyltransferase 1 family.


ensembl_gene_id: B7F8I2
symbol: B7F8I2_ORYSJ
gene_biotype: protein_coding
description:
  cDNA, clone: J065054A13, full insert sequence; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: B7F8P3
symbol: B7F8P3_ORYSJ
gene_biotype: protein_coding
description:
  Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family.


ensembl_gene_id: B7F8P5
symbol: SAUR39
gene_biotype: protein_coding
description:
  Auxin-responsive protein SAUR36; Involved in the negative regulation of organ growth. May act as a negative regulator of auxin synthesis and transport.


ensembl_gene_id: B7F8Z6
symbol: B7F8Z6_ORYSJ
gene_biotype: protein_coding
description:
  cDNA, clone: J065199H08, full insert sequence; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: B7F922
symbol: B7F922_ORYSJ
gene_biotype: protein_coding
description:
  Dolichol-phosphate mannosyltransferase subunit 3; Stabilizer subunit of the dolichol-phosphate mannose (DPM) synthase complex; tethers catalytic subunit to the ER. Belongs to the DPM3 family.


ensembl_gene_id: B7F924
symbol: RH3
gene_biotype: protein_coding
description:
  NRR repressor homolog 3; Binds to and represses NPR1/NH1-mediated transcriptional activation of LG2 in vitro.


ensembl_gene_id: B7F958
symbol: UGD2
gene_biotype: protein_coding
description:
  UDP-glucose 6-dehydrogenase 2; Involved in the biosynthesis of UDP-glucuronic acid (UDP- GlcA), providing nucleotide sugars for cell-wall polymers.


ensembl_gene_id: B7F9E7
symbol: B7F9E7_ORYSJ
gene_biotype: protein_coding
description:
  Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.


ensembl_gene_id: B7F9G7
symbol: ADIPOR1
gene_biotype: protein_coding
description:
  Heptahelical transmembrane protein ADIPOR1; May play a role in abiotic stress response; Belongs to the ADIPOR family.


ensembl_gene_id: B7F9Y2
symbol: B7F9Y2_ORYSJ
gene_biotype: protein_coding
description:
  cDNA, clone: J100014C05, full insert sequence; Belongs to the iron/ascorbate-dependent oxidoreductase family.


ensembl_gene_id: B7FA90
symbol: HPT1
gene_biotype: protein_coding
description:
  Probable homogentisate phytyltransferase 1, chloroplastic; Involved in the synthesis of tocopherol (vitamin E). Catalyzes the condensation of homogentisate and phytyl diphosphate to form dimethylphytylhydroquinone (By similarity); Belongs to the UbiA prenyltransferase family.


ensembl_gene_id: B7FAC8
symbol: B7FAC8_ORYSJ
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: B7FAL5
symbol: Y14A
gene_biotype: protein_coding
description:
  RNA-binding protein Y14A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the core components remain bound to spliced mRNAs throughout all stages of mRNA metabolism thereby influe [...]


ensembl_gene_id: B8YEK4
symbol: OGR1
gene_biotype: protein_coding
description:
  Pentatricopeptide repeat-containing protein OGR1, mitochondrial; Involved in multiple sites RNA editing events in mitochondria. Essential for C-to-U RNA editing at seven specific sites of nad2, nad4, cox2, cox3 and ccmC transcripts, all coding for proteins involved in the mitochondrial electron transport chain coupled to ATP generation. Required for normal growth and development.


ensembl_gene_id: B8YIE8
symbol: ROS1C
gene_biotype: protein_coding
description:
  Protein ROS1C; Bifunctional DNA glycosylase/lyase, which excises 5- methylcytosine (5-meC) and 5-hydroxymethylcytosine (5-hmeC), leaving an apyrimidinic (AP) site that is subsequently incised by the lyase activity. Is responsible for the demethylation of methylated cytosine residues of Tos17 retrotransposon DNA. Demethylation of Tos17 cytosine residues promotes its transposition. May be involved in seed development.


ensembl_gene_id: B9EUM5
symbol: KIN14A
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-14A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-14 subfamily.


ensembl_gene_id: B9EVI4
symbol: B9EVI4_ORYSJ
gene_biotype: protein_coding
description:
  Protein arginine methyltransferase NDUFAF7; Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I).


ensembl_gene_id: B9EWG6
symbol: B9EWG6_ORYSJ
gene_biotype: protein_coding
description:
  Pyridoxal phosphate homeostasis protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which may be involved in intracellular homeostatic regulation of pyridoxal 5'- phosphate (PLP), the active form of vitamin B6; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: B9EXZ6
symbol: BAT1
gene_biotype: protein_coding
description:
  Amino-acid permease BAT1 homolog; May be involved in the transport of amino acids. Belongs to the amino acid-polyamine-organocation (APC) superfamily. Amino acid/choline transporter (ACT) (TC 2.A.3.4) family.


ensembl_gene_id: B9EY52
symbol: KIN13B
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-13B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-13 subfamily.


ensembl_gene_id: B9EYD3
symbol: OsJ_02844
gene_biotype: protein_coding
description:
  Phospholipase A1-II 4; Acylhydrolase that catalyzes the hydrolysis of phospholipids at the sn-1 position; Belongs to the AB hydrolase superfamily. Lipase family.


ensembl_gene_id: B9EYZ1
symbol: OsJ_03112
gene_biotype: protein_coding
description:
  Putative D-cysteine desulfhydrase 2, mitochondrial; Catalyzes the production of hydrogen sulfide (H2S) from cysteine; Belongs to the ACC deaminase/D-cysteine desulfhydrase family.


ensembl_gene_id: B9F058
symbol: OJ1003_F04.32
gene_biotype: protein_coding
description:
  Acyl-[acyl-carrier-protein] desaturase 3, chloroplastic; Introduces a cis double bond in the acyl chain of an acyl- [acyl-carrier protein].


ensembl_gene_id: B9F166
symbol: LOGL2
gene_biotype: protein_coding
description:
  Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL2; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms (By similarity).


ensembl_gene_id: B9F1C0
symbol: SHOC1
gene_biotype: protein_coding
description:
  Protein SHORTAGE IN CHIASMATA 1 homolog; Essential for normal crossover (CO) formation during meiosis. Essential component for the formation of class I meiotic COs. Interacts with PTD, another meiotic component, to regulate CO formation, possibly by stabilizing the recombination intermediates during meiosis. SHOC1 and PTD may form transient heterotrimeric or heterotetrametric complexes with HEI10 and/or ZIP4 to promote class I COs formation. Does not seem to be involved in early meiotic recombination steps involving double-strand break (DSB) formation, processing, and single-strand inv [...]


ensembl_gene_id: B9F1L8
symbol: DOF2
gene_biotype: protein_coding
description:
  Dof zinc finger protein 2; Transcription factor that may transactivate seed storage protein genes in developing seeds.


ensembl_gene_id: B9F2L1
symbol: OsJ_05277
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase 2; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Does not accept 4'-phosphopantothenoylcysteine as a substrate (By similarity); Belongs to the eukaryotic CoaD family.


ensembl_gene_id: B9F2U5
symbol: B1103G11.7
gene_biotype: protein_coding
description:
  Translation factor GUF1 homolog, chloroplastic; Promotes chloroplast protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes.


ensembl_gene_id: B9F2Y7
symbol: KIN4C
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-4C; Microtubule-dependent motor protein involved in the control of the oriented deposition of cellulose microfibrils.


ensembl_gene_id: B9F3B6
symbol: ALDH5F1
gene_biotype: protein_coding
description:
  Succinate-semialdehyde dehydrogenase, mitochondrial; Oxidizes specifically succinate semialdehyde. Involved in plant response to environmental stress by preventing the accumulation of reactive oxygen species (By similarity).


ensembl_gene_id: B9F4A8
symbol: B9F4A8_ORYSJ
gene_biotype: protein_coding
description:
  Os02g0217800 protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: B9F4I8
symbol: LPA1
gene_biotype: protein_coding
description:
  P-loop NTPase domain-containing protein LPA1; Required for the accumulation of phytic acid in seeds. Phytic acid is the primary storage form of phosphorus in cereal grains and other plant seeds.


ensembl_gene_id: B9F4Q9
symbol: GW2
gene_biotype: protein_coding
description:
  E3 ubiquitin-protein ligase GW2; E3 ubiquitin-protein ligase involved in the regulation of grain size. May limit grain width and weight by restricting cell proliferation of the spikelet hull. Possesses E3 ubiquitin-protein ligase activity in vitro.


ensembl_gene_id: B9F655
symbol: IRL7
gene_biotype: protein_coding
description:
  Plant intracellular Ras-group-related LRR protein 7; Leucine-rich repeat protein that likely mediates protein interactions, possibly in the context of signal transduction. Belongs to the SHOC2 family.


ensembl_gene_id: B9F676
symbol: OsJ_09923
gene_biotype: protein_coding
description:
  Probable glucan 1,3-alpha-glucosidase; Cleaves sequentially the 2 innermost alpha-1,3-linked glucose residues from the Glc(2)Man(9)GlcNAc(2) oligosaccharide precursor of immature glycoproteins. May be required for defense response elicited by pathogen-associated molecular patterns (PAMPs). Belongs to the glycosyl hydrolase 31 family.


ensembl_gene_id: B9F7C8
symbol: KIN5B
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-5B; Responsible for microtubule translocation. May be important for the organization of phragmoplast-specific arrays of microtubules (By similarity). Plays an essential role in stabilizing the mitotic spindle. Required during mitotic cytokinesis (By similarity). Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-5/BimC subfamily.


ensembl_gene_id: B9FAF3
symbol: KIN14E
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-14E; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-14 subfamily.


ensembl_gene_id: B9FCV3
symbol: OsJ_16428
gene_biotype: protein_coding
description:
  Probable glucuronosyltransferase Os04g0650300; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls; Belongs to the glycosyltransferase 43 family.


ensembl_gene_id: B9FDB8
symbol: ALN
gene_biotype: protein_coding
description:
  Probable allantoinase; Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoate by hydrolytic cleavage of the five-member hydantoin ring. Catalyzes the first step of the ureide allantoin degradation followed by the sequential activity of AAH, UGLYAH and UAH which allows a complete purine breakdown without the intermediate generation of urea (By similarity); Belongs to the metallo-dependent hydrolases superfamily. Allantoinase family.


ensembl_gene_id: B9FDD2
symbol: B9FDD2_ORYSJ
gene_biotype: protein_coding
description:
  Pre-mRNA cleavage factor Im 25 kDa subunit; Component of the cleavage factor Im (CFIm) complex that plays a key role in pre-mRNA 3'-processing.


ensembl_gene_id: B9FDE0
symbol: BSK3
gene_biotype: protein_coding
description:
  Probable serine/threonine-protein kinase BSK3; Probable serine/threonine kinase that acts as positive regulator of brassinosteroid (BR) signaling downstream of BRI1.


ensembl_gene_id: B9FDR3
symbol: TRN1
gene_biotype: protein_coding
description:
  Transportin-1; Functions in nuclear protein import as nuclear transport receptor. Serves as receptor for nuclear localization signals (NLS) in cargo substrates. Is thought to mediate docking of the importin/substrate complex to the nuclear pore complex (NPC) through binding to nucleoporin and the complex is subsequently translocated through the pore by an energy requiring, Ran-dependent mechanism. At the nucleoplasmic side of the NPC, Ran binds to the importin, the importin/substrate complex dissociates and importin is re-exported from the nucleus to the cytoplasm where GTP hydrolysis  [...]


ensembl_gene_id: B9FDT1
symbol: OST1B
gene_biotype: protein_coding
description:
  Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the e [...]


ensembl_gene_id: B9FF83
symbol: B9FF83_ORYSJ
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: B9FFD2
symbol: OPR12
gene_biotype: protein_coding
description:
  Putative 12-oxophytodienoate reductase 12; Putative oxophytodienoate reductase that may be involved in the biosynthesis or metabolism of oxylipin signaling molecules. Belongs to the NADH:flavin oxidoreductase/NADH oxidase family.


ensembl_gene_id: B9FFD3
symbol: OPR13
gene_biotype: protein_coding
description:
  Putative 12-oxophytodienoate reductase 13; Putative oxophytodienoate reductase that may be involved in the biosynthesis or metabolism of oxylipin signaling molecules. Belongs to the NADH:flavin oxidoreductase/NADH oxidase family.


ensembl_gene_id: B9FGV7
symbol: OsJ_17006
gene_biotype: protein_coding
description:
  Solute carrier family 40 member 3, chloroplastic; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.


ensembl_gene_id: B9FI63
symbol: OJ1781_H11.13
gene_biotype: protein_coding
description:
  GTPase ERA-like, chloroplastic; Nuclear genome-encoded probable GTPase involved in ribosome biogenesis in chloroplasts. Plays a role in 16S rRNA maturation in plastids and may contribute to the assembly of the small (30S) ribosomal subunit; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family.


ensembl_gene_id: B9FJ61
symbol: SPP2
gene_biotype: protein_coding
description:
  Signal peptide peptidase 2; Intramembrane-cleaving aspartic protease (I-CLiP) that cleaves type II membrane signal peptides in the hydrophobic plane of the membrane. Catalyzes intramembrane proteolysis of some signal peptides after they have been cleaved from a preprotein, resulting in the release of the fragment from the ER membrane into the cytoplasm.


ensembl_gene_id: B9FJG3
symbol: OJ1122_B08
gene_biotype: protein_coding
description:
  Zinc finger BED domain-containing protein RICESLEEPER 1; Transposase-like protein that is essential for plant growth and development. May regulate global gene expression by recruiting other cellular factors.


ensembl_gene_id: B9FJH4
symbol: LAC12
gene_biotype: protein_coding
description:
  Laccase-12; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family.


ensembl_gene_id: B9FK36
symbol: ACC2
gene_biotype: protein_coding
description:
  Acetyl-CoA carboxylase 2; Multifunctional enzyme that catalyzes the carboxylation of acetyl-CoA, forming malonyl-CoA, which is used in the plastid for fatty acid synthesis and in the cytosol in various biosynthetic pathways including fatty acid elongation.


ensembl_gene_id: B9FKM7
symbol: MCM8
gene_biotype: protein_coding
description:
  Probable DNA helicase MCM8; Probable DNA helicase that may play a role in DNA repair during meiosis.


ensembl_gene_id: B9FKW9
symbol: CPK14
gene_biotype: protein_coding
description:
  Calcium-dependent protein kinase 14; May play a role in signal transduction pathways that involve calcium as a second messenger; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.


ensembl_gene_id: B9FL70
symbol: KIN14K
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-14K; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-14 subfamily.


ensembl_gene_id: B9FM64
symbol: OsJ_16906
gene_biotype: protein_coding
description:
  E3 UFM1-protein ligase 1 homolog; E3 UFM1-protein ligase that mediates ufmylation of target proteins.


ensembl_gene_id: B9FQQ6
symbol: B9FQQ6_ORYSJ
gene_biotype: protein_coding
description:
  26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.


ensembl_gene_id: B9FS33
symbol: KIN7G
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-7G; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-7 subfamily.


ensembl_gene_id: B9FS74
symbol: KIN14L
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-14L; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-14 subfamily.


ensembl_gene_id: B9FSC8
symbol: OPR11
gene_biotype: protein_coding
description:
  Putative 12-oxophytodienoate reductase 11; Putative oxophytodienoate reductase that may be involved in the biosynthesis or metabolism of oxylipin signaling molecules. Belongs to the NADH:flavin oxidoreductase/NADH oxidase family.


ensembl_gene_id: B9FSH5
symbol: OJ1136_C11.1
gene_biotype: protein_coding
description:
  Alanine--tRNA ligase, chloroplastic/mitochondrial; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: B9FTR1
symbol: KIN14M
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-14M; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-14 subfamily.


ensembl_gene_id: B9FU45
symbol: OsJ_21957
gene_biotype: protein_coding
description:
  Nucleosome assembly protein 1-like 4; May modulate chromatin structure by regulation of nucleosome assembly/disassembly.


ensembl_gene_id: B9FUF9
symbol: KIN12E
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-12E; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-12 subfamily.


ensembl_gene_id: B9FXT3
symbol: UDT1
gene_biotype: protein_coding
description:
  Transcription factor UDT1; Transcription factor that plays a crucial role in tapetum development. Required for male fertility and pollen differentiation within the developing anther. Plays a major role in maintaining tapetum development, starting in early meiosis. Required for pollen mother cell meiosis. May regulate the anther-specific cysteine protease CP1 and lipid-transfer proteins C4 and C6. Required for anther development. Functions in parallel with GAMYB to regulate early anther development. Functions upstream of the transcription factor TDR and may positively regulate its trans [...]


ensembl_gene_id: B9FXV5
symbol: OsJ_24703
gene_biotype: protein_coding
description:
  Eukaryotic translation initiation factor 4G; Component of the protein complex eIF4F, which is involved in the recognition of the mRNA cap, ATP-dependent unwinding of 5'-terminal secondary structure and recruitment of mRNA to the ribosome; Belongs to the eukaryotic initiation factor 4G family.


ensembl_gene_id: B9G193
symbol: RR31
gene_biotype: protein_coding
description:
  Two-component response regulator ORR31; Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. Belongs to the ARR family. Type-B subfamily.


ensembl_gene_id: B9G2A8
symbol: OJ1451_A02.25
gene_biotype: protein_coding
description:
  Auxin transport protein BIG; Required for auxin efflux and polar auxin transport (PAT) influencing auxin-mediated developmental responses (e.g. cell elongation, apical dominance, lateral root production, inflorescence architecture, general growth and development) (By similarity). Belongs to the UBR4 family.


ensembl_gene_id: B9G2E6
symbol: SWEET7D
gene_biotype: protein_coding
description:
  Putative bidirectional sugar transporter SWEET7d; Mediates both low-affinity uptake and efflux of sugar across the plasma membrane.


ensembl_gene_id: B9G300
symbol: ABCG52
gene_biotype: protein_coding
description:
  ABC transporter G family member 52; May be a general defense protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.


ensembl_gene_id: B9G434
symbol: ISA3
gene_biotype: protein_coding
description:
  Isoamylase 3, chloroplastic; Starch-debranching enzyme that plays a role in the degradation of transitory starch during the night in leaf blades, facilitates the formation of spherical amyloplasts containing compound granules in the endosperm, and affects morphological characteristics of plastids; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: B9G4M9
symbol: HAP2B
gene_biotype: protein_coding
description:
  Protein HAPLESS 2-B; Required for male fertility. Plays a role in pollen tube guidance and successful gamete attachment. Essential for the fusion of gametes during double fertilization, where one male gamete fuses with the egg to produce a zygote, and another male gamete fuses with the central cell to produce the endosperm. Mediates the fusion of cell membranes. Not required for pollen tube outgrowth.


ensembl_gene_id: B9G505
symbol: B9G505_ORYSJ
gene_biotype: protein_coding
description:
  Signal peptidase complex subunit 3; Microsomal signal peptidase is a membrane-bound endoproteinase that removes signal peptides from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum. Belongs to the SPCS3 family.


ensembl_gene_id: B9G5N1
symbol: PAIR3
gene_biotype: protein_coding
description:
  Meiosis-specific protein PAIR3; Plays a crucial role in homologous chromosome pairing and synapsis in meiosis. Does not seem required for cytokinesis. Is essential for meiotic bouquet formation, homologous chromosome pairing and normal recombination, and synaptonemal complex (SC) assembly. Required for the proper association of PAIR2 with chromosomes.


ensembl_gene_id: B9G5Y5
symbol: ABCG25
gene_biotype: protein_coding
description:
  ABC transporter G family member 25; Belongs to the ABC transporter superfamily. ABCG family. Eye pigment precursor importer (TC 3.A.1.204) subfamily.


ensembl_gene_id: B9G8P1
symbol: KIN14P
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-14P; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-14 subfamily.


ensembl_gene_id: B9G9A5
symbol: B9G9A5_ORYSJ
gene_biotype: protein_coding
description:
  U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.


ensembl_gene_id: B9GAG9
symbol: KTI12
gene_biotype: protein_coding
description:
  Protein KTI12 homolog; Elongator-associated factor that is not a structural subunit but rather transiently contacts Elongator, presumably to promote its interaction with elongation competent pol II. Regulates both meristem activity and organ growth; acts as a positive regulator of adaxial leaf patterning. Required for an early step in synthesis of 5-carbamoylmethyl (ncm5) groups present on uridines (ncm5U) at the wobble position in tRNA (By similarity).


ensembl_gene_id: B9GBJ9
symbol: CYP714C1
gene_biotype: protein_coding
description:
  Cytochrome P450 714C1; Probably not involved in gibberellin metabolism since over- expression of CYP714C1 in a heterologous system does not induce semi- dwarfism.


ensembl_gene_id: B9GBM3
symbol: MIF2
gene_biotype: protein_coding
description:
  Mini zinc finger protein 2; Inhibits zinc finger homeodomain (ZHD) transcription factors, by interacting with them to prevent both their nuclear localization and their DNA-binding properties.


ensembl_gene_id: B9GCH9
symbol: OsJ_35660
gene_biotype: protein_coding
description:
  Urease; Urea hydrolase involved in nitrogen recycling from ureide, purine, and arginine catabolism; In the C-terminal section; belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.


ensembl_gene_id: B9GDE5
symbol: ABCG50
gene_biotype: protein_coding
description:
  ABC transporter G family member 50; May be a general defense protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.


ensembl_gene_id: B9GE13
symbol: KIN12F
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-12F; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-12 subfamily.


ensembl_gene_id: B9X287
symbol: CYP734A6
gene_biotype: protein_coding
description:
  Cytochrome P450 734A6; Cytochrome P450 involved in brassinosteroids (BRs) inactivation and regulation of BRs homeostasis. Is a multifunctional and multisubstrate enzyme that controls the endogenous bioactive BR content both by direct inactivation of castasterone and by decreasing the levels of BR precursors. Catalyzes the oxidation of carbon 22 hydroxylated BR intermediates to produce C26 oxidized metabolites.


ensembl_gene_id: C0LT23
symbol: CERK
gene_biotype: protein_coding
description:
  Ceramide kinase; Catalyzes specifically the phosphorylation of ceramide to form ceramide 1-phosphate. Possesses activity on ceramide analog (C6 synthetic ceramide) in vitro. Ceramide is a critical sphingolipid metabolite that induces programmed cell death (PCD) in plants and ceramide-1-phosphate has a PCD suppressive effect. Thus, ceramide phosphorylation plays a role in the modulation of PCD and CERK activity is crucial for the maintenance of cell viability.


ensembl_gene_id: C0SQ89
symbol: CMT3
gene_biotype: protein_coding
description:
  DNA (cytosine-5)-methyltransferase CMT3; Involved in CpXpG DNA methylation. Plays a critical role in the maintenance of CpXpG DNA methylation and suppression of a wide spectrum of transposable element (TE) activities. Required for proper plant development in reproductive stage.


ensembl_gene_id: C7AU21
symbol: D27
gene_biotype: protein_coding
description:
  Beta-carotene isomerase D27, chloroplastic; Involved in strigolactones biosynthesis by catalyzing the isomerization of the C9-C10 double bond in all-trans-beta-carotene leading to 9-cis-beta-carotene and providing the substrate for CCD7. Strigolactones are hormones that inhibit tillering and shoot branching through the MAX-dependent pathway, contribute to the regulation of shoot architectural response to phosphate-limiting conditions and function as rhizosphere signals that stimulate hyphal branching of arbuscular mycorrhizal fungi and trigger seed germination of root parasitic weeds.


ensembl_gene_id: C7IW64
symbol: ROS1A
gene_biotype: protein_coding
description:
  Protein ROS1A; Bifunctional DNA glycosylase/lyase, which excises 5- methylcytosine (5-meC) and 5-hydroxymethylcytosine (5-hmeC), leaving an apyrimidinic (AP) site that is subsequently incised by the lyase activity (Probable). DNA demethylase that is indispensable in both male and female gametophyte development. Involved in the regulation of DNA methylation in the promoters of RISBZ1/BZIP58 and DOF3/RPBF, two transcription factors that functions synergistically to positively regulate genes that are key players in the development of aleurone layers. Active DNA demethylation carried out b [...]


ensembl_gene_id: C7IY93
symbol: C7IY93_ORYSJ
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.


ensembl_gene_id: C7IZ16
symbol: OsJ_08156
gene_biotype: protein_coding
description:
  Probable glucosamine 6-phosphate N-acetyltransferase 2; Acetyltransferase involved in UDP-N-acetylglucosamine (UDP- GlcNAc) biosynthesis. UDP-GlcNAc is an essential metabolite that serves as an initial sugar donor of N-glycan synthesis and thus plays an important role in protein and lipid glycosylation (By similarity).


ensembl_gene_id: C7J066
symbol: C7J066_ORYSJ
gene_biotype: protein_coding
description:
  Os03g0823100 protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: C7J0A2
symbol: TOP3A
gene_biotype: protein_coding
description:
  DNA topoisomerase 3-alpha; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)- enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus removing DNA supercoils [...]


ensembl_gene_id: C7J0P3
symbol: GT5
gene_biotype: protein_coding
description:
  Probable glycosyltransferase 5; Probable glycosyltransferase that may be involved in the biosynthesis of xyloglucan.


ensembl_gene_id: C7J0R5
symbol: OST4B
gene_biotype: protein_coding
description:
  Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4B; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the e [...]


ensembl_gene_id: C7J0Y1
symbol: C7J0Y1_ORYSJ
gene_biotype: protein_coding
description:
  Molybdopterin molybdenumtransferase; Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released.


ensembl_gene_id: C7J2Z1
symbol: ABI4
gene_biotype: protein_coding
description:
  Ethylene-responsive transcription factor ABI4; Probable transcription regulator that binds to cis-responsive elements of genes involved in stress response; Belongs to the AP2/ERF transcription factor family. ERF subfamily.


ensembl_gene_id: C7J4U3
symbol: OST4A
gene_biotype: protein_coding
description:
  Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the e [...]


ensembl_gene_id: C7J4X0
symbol: C7J4X0_ORYSJ
gene_biotype: protein_coding
description:
  Os07g0131250 protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: C7J6G6
symbol: ABCG46
gene_biotype: protein_coding
description:
  ABC transporter G family member 46; May be a general defense protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.


ensembl_gene_id: C7J8E5
symbol: RAPTOR1
gene_biotype: protein_coding
description:
  Regulatory-associated protein of TOR 1; Component of TORC1 complex, which is an essential cell growth regulator that controls plant development. Acts by recruiting substrates for TOR. Acts by activating transcription, protein synthesis and ribosome biogenesis, and inhibiting mRNA degradation and autophagy. Belongs to the WD repeat RAPTOR family.


ensembl_gene_id: C7J8H0
symbol: C7J8H0_ORYSJ
gene_biotype: protein_coding
description:
  Steroid 5-alpha-reductase DET2; Involved in a reduction step in the biosynthesis of the plant steroid, brassinolide.


ensembl_gene_id: D0TZF0
symbol: ISA1
gene_biotype: protein_coding
description:
  Isoamylase 1, chloroplastic; Starch-debranching enzyme involved in amylopectin biosynthesis in endosperm. Functions by removing excess branches or improper branches that interfere with the formation of double helices of the cluster chains of amylopectin and crystallization of starch. Works as ISA1 homooligomer or together with ISA2 as heterooligomer. The heterooligomer ISA1 and ISA2 possesses higher affinity than the ISA1 homooligomer for various branched polyglucans in vitro, but no marked differences exist in chain preferences for debranching of amylopectin and phytoglycogen between  [...]


ensembl_gene_id: D7UPN3
symbol: RLK10
gene_biotype: protein_coding
description:
  LysM domain receptor-like kinase 10; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: E3VXF2
symbol: SGO1
gene_biotype: protein_coding
description:
  Shugoshin-1; Plays a central role in chromosome cohesion during meiosis I by preventing premature dissociation of cohesin complex from centromeres after prophase, when most of cohesin complex dissociates from chromosomes arms. Required for the timely assembly and maintenance of synaptonemal complex (SC) during early prophase I. Required for maintenance of centromeric cohesion before prophase II and correct segregation of chromatids during meiosis II. Has apparently no function in mitosis; Belongs to the shugoshin family.


ensembl_gene_id: E5RQA1
symbol: GHD7
gene_biotype: protein_coding
description:
  Transcription factor GHD7; Probable transcription factor involved in the regulation of flowering time under long day (LD) conditions. Plays a major role as repressor of flowering. Controls flowering time by negatively regulating the expression of EHD1 and HD3A.


ensembl_gene_id: F1SZ44
symbol: RF2
gene_biotype: protein_coding
description:
  Protein FERTILITY RESTORER RF2, mitochondrial; Non-functional allele of the RF2 fertility restorer of rice varieties with LD-type cytoplasmic male sterility (CMS). Non-functional RF2 alleles are found in japonica cultivars Taichung 65 and Nipponbare (AC F1SZ44), and is due to the presence of THR-78 which replaces ILE-78 in the functional allele. Functional allele is found in the japonica cultivars Fukuyama and Owarihatamochi (AC F1SZ42), and indica cultivar Kasalath (AC F1SZ41).


ensembl_gene_id: F7J0M6
symbol: RGA4
gene_biotype: protein_coding
description:
  Disease resistance protein RGA4; Probable disease resistance protein. Resistance proteins guard the plant against pathogens that contain an appropriate avirulence protein via an indirect interaction with this avirulence protein. That triggers a defense system including the hypersensitive response, which restricts the pathogen growth. At the opposite of cultivars Aichi asahi and Sasanishiki, the cultivars Nipponbare, Mokoto and Hitomebore don't recognize the effector avirulence protein AVR-Pia from M.oryzae.


ensembl_gene_id: F9W301
symbol: KIN1
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-1; Kinesin-like motor protein that exhibits microtubule- stimulated ATPase activity. Plays an essential role in male meiotic chromosomal dynamics, male gametogenesis and anther dehiscence. May play a minor and nonessential role in regulating meiotic spindle formation.


ensembl_gene_id: G3XKQ9
symbol: LAX2
gene_biotype: protein_coding
description:
  Protein LAX PANICLE 2; Involved in the regulation of shoot branching by controlling axillary meristem (AM) formation. Functions in association with LAX1 to regulate the process of AM formation. Possesses transactivation activity in yeast.


ensembl_gene_id: G9LZD7
symbol: XIAO
gene_biotype: protein_coding
description:
  Probable inactive leucine-rich repeat receptor kinase XIAO; Functions in the early stages of organ development by regulating cell division rate. Is probably involved in the regulation of a number of cell-cycle genes. May act as regulator of brassinosteroid (BR) signaling and cell-cycle controlling organ growth. Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: H2KWF1
symbol: OsJ_33246
gene_biotype: protein_coding
description:
  Parkeol synthase; Specifically mediates the conversion of oxidosqualene ((3S)- 2,3-epoxy-2,3-dihydrosqualene) to parkeol.


ensembl_gene_id: H6TFZ4
symbol: SUS5
gene_biotype: protein_coding
description:
  Sucrose synthase 5; Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways.


ensembl_gene_id: I1Z695
symbol: ER2
gene_biotype: protein_coding
description:
  LRR receptor-like serine/threonine-protein kinase ER2; Receptor kinase that may be involved in the regulation of cell proliferation and cell growth.


ensembl_gene_id: I6PL68
symbol: HEI10
gene_biotype: protein_coding
description:
  E3 ubiquitin-protein ligase CCNB1IP1 homolog; Ubiquitin E3 ligase required for class I crossover (CO) formation during meiosis.


ensembl_gene_id: K4PW38
symbol: RSS3
gene_biotype: protein_coding
description:
  Protein RICE SALT SENSITIVE 3; Involved in the repression of jasmonate (JA)-induced genes. Forms a ternary complex with TIFY11A/JAZ9 and BHLH094 to negatively regulate JA-responsive genes. Involved in transcriptional regulation in the root tip. Plays a regulatory role in root cell elongation. Regulates root cell elongation during salt stress.


ensembl_gene_id: O04138
symbol: Cht4
gene_biotype: protein_coding
description:
  Chitinase 4; Hydrolyzes chitin and may function in reproductive organs during embryogenesis and seed maturation. Belongs to the glycosyl hydrolase 19 family. Chitinase class IV subfamily.


ensembl_gene_id: O04226
symbol: P5CS1
gene_biotype: protein_coding
description:
  Delta-1-pyrroline-5-carboxylate synthase 1; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants. Involved in abiotic stress tolerance. In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: O04433
symbol: SRP14
gene_biotype: protein_coding
description:
  Signal recognition particle 14 kDa protein; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding (By similarity).


ensembl_gene_id: O04985
symbol: HB2
gene_biotype: protein_coding
description:
  Non-symbiotic hemoglobin 2; May not function as an oxygen storage or transport protein, but might act as an oxygen sensor or play a role in electron transfer, possibly to a bound oxygen molecule; Belongs to the plant globin family.


ensembl_gene_id: O04986
symbol: HB1
gene_biotype: protein_coding
description:
  Non-symbiotic hemoglobin 1; May not function as an oxygen storage or transport protein, but might act as an oxygen sensor or play a role in electron transfer, possibly to a bound oxygen molecule. Has an unusually high affinity for O(2) because of a very low dissociation constant; Belongs to the plant globin family.


ensembl_gene_id: O22567
symbol: CLA1
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase 1, chloroplastic; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP). Is a limiting enzyme for plastidic isoprenoid biosynthesis and essential for chloroplast development (By similarity).


ensembl_gene_id: O23875
symbol: PCF1
gene_biotype: protein_coding
description:
  Transcription factor PCF1; Transcription activator. Binds the promoter core sequence 5'- GGNCC-3', especially at sites IIa (5'-GGGCCCAC-3') and IIb (5'- GGTCCCAC-3') (essential for meristematic tissue-specificity expression) of the PCNA gene promoter.


ensembl_gene_id: O23877
symbol: OsJ_23093
gene_biotype: protein_coding
description:
  Ferredoxin--NADP reductase, embryo isozyme, chloroplastic; May play a key role in regulating the relative amounts of cyclic and non-cyclic electron flow to meet the demands of the plant for ATP and reducing power. Is involved in nitrate assimilation; Belongs to the ferredoxin--NADP reductase type 1 family.


ensembl_gene_id: O24174
symbol: BADH1
gene_biotype: protein_coding
description:
  Betaine aldehyde dehydrogenase 1; Dehydrogenase that can use N-acetyl-gamma-aminobutyraldehyde (NAGABald), gamma-guanidinobutyraldehyde (GGBald), betaine aldehyde (Bet-ald), gamma-aminobutyraldehyde (GAB-ald), acetaldehyde, 4- aminobutylaldehyde (AB-ald), 3-aminopropionaldehyde (AP-ald), 4-N- trimethylaminobutyraldehyde (TMAB-ald) and 3-N- trimethylaminopropionaldehyde (TMAP-ald) as substrates. Catalyzes the oxidation of GAB-ald more efficiently than Bet-ald. May convert acetaldehyde into acetate, thus facilitating the production of acetyl- CoA in peroxisomes under anaerobic conditions.


ensembl_gene_id: O24210
symbol: PANC
gene_biotype: protein_coding
description:
  Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine to form pantothenate. Essential for panthotenate biosynthesis (Probable).


ensembl_gene_id: O24230
symbol: EXPB2
gene_biotype: protein_coding
description:
  Expansin-B2; May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity).


ensembl_gene_id: O48653
symbol: P0677H08.20
gene_biotype: protein_coding
description:
  DNA polymerase alpha catalytic subunit; Polymerase alpha in a complex with DNA primase is a replicative polymerase; Belongs to the DNA polymerase type-B family.


ensembl_gene_id: O49068
symbol: TUBG2
gene_biotype: protein_coding
description:
  Tubulin gamma-2 chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles, suggesting that it is involved in the minus-end nucleation of microtubule assembly.


ensembl_gene_id: O64422
symbol: OJ1364E02.13
gene_biotype: protein_coding
description:
  Fructose-1,6-bisphosphatase, chloroplastic; Catalyzes the irreversible reaction from fructose-1,6- bisphosphate to fructose-6-phosphate and inorganic phosphate, to regenerate the primary CO(2) acceptor molecule, ribulose-1,5- bisphosphate. Involved in the regulation of photosynthetic performance and sucrose synthesis; Belongs to the FBPase class 1 family.


ensembl_gene_id: O64437
symbol: RINO1
gene_biotype: protein_coding
description:
  Inositol-3-phosphate synthase 1; Involved in myo-inositol synthesis. Is a key enzyme in the phytic acid biosynthesis pathway in seeds.


ensembl_gene_id: O64464
symbol: PBF1
gene_biotype: protein_coding
description:
  Proteasome subunit beta type-1; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity; Belongs to the peptidase T1B family.


ensembl_gene_id: O64937
symbol: REFA1
gene_biotype: protein_coding
description:
  Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.


ensembl_gene_id: O65091
symbol: NLTP4_ORYSJ
gene_biotype: protein_coding
description:
  Non-specific lipid-transfer protein 4; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.


ensembl_gene_id: O65857
symbol: GSTF1
gene_biotype: protein_coding
description:
  Probable glutathione S-transferase GSTF1; Conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles; Belongs to the GST superfamily. Phi family.


ensembl_gene_id: O80416
symbol: OSH15
gene_biotype: protein_coding
description:
  Homeobox protein knotted-1-like 12; Probable transcription factor that may be involved in shoot formation during embryogenesis; Belongs to the TALE/KNOX homeobox family.


ensembl_gene_id: O81277
symbol: PSK5
gene_biotype: protein_coding
description:
  Phytosulfokine-alpha; Promotes plant cell differentiation, organogenesis and somatic embryogenesis as well as cell proliferation; Belongs to the phytosulfokine family.


ensembl_gene_id: O82117
symbol: CO3
gene_biotype: protein_coding
description:
  Zinc finger protein CO3; Probable transcription factor involved in the regulation of flowering time under short day (SD) conditions. Functions as repressor of flowering under SD conditions, independently of HD1, EHD1, MADS50 and MADS51. Controls flowering time under SD conditions by negatively regulating the expression of HD3A and FTL. Belongs to the CONSTANS family.


ensembl_gene_id: O82143
symbol: RPN10
gene_biotype: protein_coding
description:
  26S proteasome non-ATPase regulatory subunit 4 homolog; Plays a role in maintaining the structural integrity of the 19S regulatory particle (RP), subcomplex of the 26S proteasome. Plays a major role in both the direct and indirect recognition of ubiquitinated substrates of ubiquitin/26S proteasome-mediated proteolysis (UPP). Binds and presumably selects ubiquitin-conjugates for destruction. Belongs to the proteasome subunit S5A family.


ensembl_gene_id: O82427
symbol: Smt2-1
gene_biotype: protein_coding
description:
  24-methylenesterol C-methyltransferase 2; Catalyzes the methyl transfer from S-adenosyl-methionine to the methylene group of 24-methylene lophenol to form 24-ethylidene lophenol; Belongs to the class I-like SAM-binding methyltransferase superfamily. Erg6/SMT family.


ensembl_gene_id: O82451
symbol: GSTF2
gene_biotype: protein_coding
description:
  Probable glutathione S-transferase GSTF2; Conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles; Belongs to the GST superfamily. Phi family.


ensembl_gene_id: O82766
symbol: AOX1B
gene_biotype: protein_coding
description:
  Ubiquinol oxidase 1b, mitochondrial; Catalyzes the cyanide-resistant oxidation of ubiquinol and the reduction of molecular oxygen to water, but does not translocate protons and consequently is not linked to oxidative phosphorylation. May increase respiration when the cytochrome respiratory pathway is restricted, or in response to low temperatures.


ensembl_gene_id: O82807
symbol: AOX1A
gene_biotype: protein_coding
description:
  Ubiquinol oxidase 1a, mitochondrial; Catalyzes the cyanide-resistant oxidation of ubiquinol and the reduction of molecular oxygen to water, but does not translocate protons and consequently is not linked to oxidative phosphorylation. May increase respiration when the cytochrome respiratory pathway is restricted, or in response to low temperatures. Belongs to the alternative oxidase family.


ensembl_gene_id: P04373
symbol: COX2
gene_biotype: protein_coding
description:
  Cytochrome c oxidase subunit 2; Component of the cytochrome c oxidase, the last enzyme in the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol- cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and t [...]


ensembl_gene_id: P07728
symbol: GLUA1
gene_biotype: protein_coding
description:
  Glutelin type-A 1 acidic chain; Seed storage protein; Belongs to the 11S seed storage protein (globulins) family.


ensembl_gene_id: P07730
symbol: GLUA2
gene_biotype: protein_coding
description:
  Glutelin type-A 2 acidic chain; Seed storage protein; Belongs to the 11S seed storage protein (globulins) family.


ensembl_gene_id: P09229
symbol: P0003D09.48
gene_biotype: protein_coding
description:
  Cysteine proteinase inhibitor 1; There are two distinct cystatins in rice seeds (Oryzacystatin-1 and -2) with different specificities against cysteine proteinases. May be involved in the control of germination by inhibition of endogenous cysteine proteinases. May play a role in defense by inhibiting exogenous proteases such as those present in digestive tracks of insects and nematodes.


ensembl_gene_id: P0C030
symbol: RUB1
gene_biotype: protein_coding
description:
  Ubiquitin-NEDD8-like protein RUB1; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is involved i [...]


ensembl_gene_id: P0C031
symbol: RUB2
gene_biotype: protein_coding
description:
  Ubiquitin-NEDD8-like protein RUB2; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is involved i [...]


ensembl_gene_id: P0C032
symbol: RUB3
gene_biotype: protein_coding
description:
  Ubiquitin-like protein-NEDD8-like protein RUB3; [Ubiquitin-like protein]: Involved in the ATP-dependent selective degradation of cellular proteins, the maintenance of chromatin structure, the regulation of gene expression, the stress response, and ribosome biogenesis; Belongs to the ubiquitin family.


ensembl_gene_id: P0C0L1
symbol: APX6
gene_biotype: protein_coding
description:
  Probable L-ascorbate peroxidase 6, chloroplastic/mitochondrial; Plays a key role in hydrogen peroxide removal; Belongs to the peroxidase family. Ascorbate peroxidase subfamily.


ensembl_gene_id: P0C0M2
symbol: GH3.2
gene_biotype: protein_coding
description:
  Probable indole-3-acetic acid-amido synthetase GH3.2; May catalyze the synthesis of indole-3-acetic acid (IAA)- amino acid conjugates, providing a mechanism for the plant to cope with the presence of excess auxin.


ensembl_gene_id: P0C0M3
symbol: GH3.11
gene_biotype: protein_coding
description:
  Probable indole-3-acetic acid-amido synthetase GH3.11; May catalyze the synthesis of indole-3-acetic acid (IAA)- amino acid conjugates, providing a mechanism for the plant to cope with the presence of excess auxin.


ensembl_gene_id: P0C127
symbol: IAA16
gene_biotype: protein_coding
description:
  Auxin-responsive protein IAA16; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.


ensembl_gene_id: P0C128
symbol: IAA25
gene_biotype: protein_coding
description:
  Auxin-responsive protein IAA25; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.


ensembl_gene_id: P0C129
symbol: IAA27
gene_biotype: protein_coding
description:
  Auxin-responsive protein IAA27; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations; Belongs to the Aux/IAA family.


ensembl_gene_id: P0C130
symbol: IAA28
gene_biotype: protein_coding
description:
  Putative auxin-responsive protein IAA28; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations; Belongs to the Aux/IAA family.


ensembl_gene_id: P0C131
symbol: IAA29
gene_biotype: protein_coding
description:
  Putative auxin-responsive protein IAA29; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations; Belongs to the Aux/IAA family.


ensembl_gene_id: P0C132
symbol: IAA30
gene_biotype: protein_coding
description:
  Auxin-responsive protein IAA30; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.


ensembl_gene_id: P0C133
symbol: IAA31
gene_biotype: protein_coding
description:
  Auxin-responsive protein IAA31; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.


ensembl_gene_id: P0C1U4
symbol: GLU1
gene_biotype: protein_coding
description:
  Endoglucanase 9; Involved in cell wall assembly during cell elongation. Belongs to the glycosyl hydrolase 9 (cellulase E) family.


ensembl_gene_id: P0C1Y4
symbol: EXPA33
gene_biotype: protein_coding
description:
  Expansin-A33; May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity); Belongs to the expansin family. Expansin A subfamily.


ensembl_gene_id: P0C282
symbol: SAP18
gene_biotype: protein_coding
description:
  Zinc finger A20 domain-containing stress-associated protein 18; May be involved in environmental stress response.


ensembl_gene_id: P0C290
symbol: GRXS8
gene_biotype: protein_coding
description:
  Monothiol glutaredoxin-S8; May only reduce GSH-thiol disulfides, but not protein disulfides; Belongs to the glutaredoxin family. CC-type subfamily.


ensembl_gene_id: P0C291
symbol: GRXS9
gene_biotype: protein_coding
description:
  Monothiol glutaredoxin-S9; May only reduce GSH-thiol disulfides, but not protein disulfides; Belongs to the glutaredoxin family. CC-type subfamily.


ensembl_gene_id: P0C2Y4
symbol: accD
gene_biotype: protein_coding
description:
  Putative acetyl-coenzyme A carboxylase carboxyl transferase subunit beta-like protein; This enzyme activity is not detectable in leaves; Belongs to the AccD/PCCB family.


ensembl_gene_id: P0C2Y7
symbol: atpI
gene_biotype: protein_coding
description:
  ATP synthase subunit a, chloroplastic; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.


ensembl_gene_id: P0C2Z0
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase subunit b, chloroplastic; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: P0C2Z3
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase epsilon chain, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane; Belongs to the ATPase epsilon chain family.


ensembl_gene_id: P0C2Z6
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase subunit alpha, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit; Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: P0C301
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase subunit c, chloroplastic; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: P0C314
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: P0C319
symbol: petD
gene_biotype: protein_coding
description:
  Cytochrome b6-f complex subunit 4; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.


ensembl_gene_id: P0C322
symbol: ndhC
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic; NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: P0C328
symbol: ndhF
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic; NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient (By similarity).


ensembl_gene_id: P0C331
symbol: ndhG
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic; NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient (By similarity).


ensembl_gene_id: P0C334
symbol: ndhE
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic; NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: P0C337
symbol: ndhH
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase subunit H, chloroplastic; NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: P0C340
symbol: ndhJ
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase subunit J, chloroplastic; NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: P0C343
symbol: ndhK
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase subunit K, chloroplastic; NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Belongs to the complex I 20 kDa subunit family.


ensembl_gene_id: P0C355
symbol: psaA
gene_biotype: protein_coding
description:
  Photosystem I P700 chlorophyll a apoprotein A1; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin.


ensembl_gene_id: P0C358
symbol: psaB
gene_biotype: protein_coding
description:
  Photosystem I P700 chlorophyll a apoprotein A2; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin.


ensembl_gene_id: P0C361
symbol: psaC
gene_biotype: protein_coding
description:
  Photosystem I iron-sulfur center; Apoprotein for the two 4Fe-4S centers FA and FB of photosystem I (PSI); essential for photochemical activity. FB is the terminal electron acceptor of PSI, donating electrons to ferredoxin. The C-terminus interacts with PsaA/B/D and helps assemble the protein into the PSI complex. Required for binding of PsaD and PsaE to PSI. PSI is a plastocyanin-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, [...]


ensembl_gene_id: P0C364
symbol: psbB
gene_biotype: protein_coding
description:
  Photosystem II CP47 reaction center protein; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light- induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation; Belongs to the PsbB/PsbC family. PsbB subfamily.


ensembl_gene_id: P0C367
symbol: psbC
gene_biotype: protein_coding
description:
  Photosystem II CP43 reaction center protein; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light- induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation; Belongs to the PsbB/PsbC family. PsbC subfamily.


ensembl_gene_id: P0C370
symbol: psbE
gene_biotype: protein_coding
description:
  Cytochrome b559 subunit alpha; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family.


ensembl_gene_id: P0C377
symbol: ccsA
gene_biotype: protein_coding
description:
  Cytochrome c biogenesis protein CcsA; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment.


ensembl_gene_id: P0C380
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1, chloroplastic; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: P0C383
symbol: matK
gene_biotype: protein_coding
description:
  Maturase K; Usually encoded in the trnK tRNA gene intron. Probably assists in splicing its own and other chloroplast group II introns.


ensembl_gene_id: P0C386
symbol: ndhI
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase subunit I, chloroplastic; NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Belongs to the complex I 23 kDa subunit family.


ensembl_gene_id: P0C389
symbol: petA
gene_biotype: protein_coding
description:
  Cytochrome f; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.


ensembl_gene_id: P0C392
symbol: petG
gene_biotype: protein_coding
description:
  Cytochrome b6-f complex subunit 5; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. PetG is required for either the stability or assembly of the cytochrome b6-f complex.


ensembl_gene_id: P0C401
symbol: psbF
gene_biotype: protein_coding
description:
  Cytochrome b559 subunit beta; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family.


ensembl_gene_id: P0C407
symbol: psbI
gene_biotype: protein_coding
description:
  Photosystem II reaction center protein I; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.


ensembl_gene_id: P0C410
symbol: psbK
gene_biotype: protein_coding
description:
  Photosystem II reaction center protein K; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.


ensembl_gene_id: P0C413
symbol: psbM
gene_biotype: protein_coding
description:
  Photosystem II reaction center protein M; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface.


ensembl_gene_id: P0C422
symbol: psbH
gene_biotype: protein_coding
description:
  Photosystem II reaction center protein H; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbH family.


ensembl_gene_id: P0C434
symbol: psbA
gene_biotype: protein_coding
description:
  Photosystem II protein D1; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors.


ensembl_gene_id: P0C437
symbol: psbD
gene_biotype: protein_coding
description:
  Photosystem II D2 protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex.


ensembl_gene_id: P0C446
symbol: rpl22
gene_biotype: protein_coding
description:
  50S ribosomal protein L22, chloroplastic; This protein binds specifically to 23S rRNA; Belongs to the universal ribosomal protein uL22 family.


ensembl_gene_id: P0C467
symbol: rps14
gene_biotype: protein_coding
description:
  30S ribosomal protein S14, chloroplastic; Binds 16S rRNA, required for the assembly of 30S particles.


ensembl_gene_id: P0C488
symbol: rps4
gene_biotype: protein_coding
description:
  30S ribosomal protein S4, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. Belongs to the universal ribosomal protein uS4 family.


ensembl_gene_id: P0C491
symbol: rps7-A
gene_biotype: protein_coding
description:
  30S ribosomal protein S7, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit.


ensembl_gene_id: P0C494
symbol: rps8
gene_biotype: protein_coding
description:
  30S ribosomal protein S8, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.


ensembl_gene_id: P0C500
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: P0C506
symbol: rpoC1
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the RNA polymerase beta' chain family. RpoC1 subfamily.


ensembl_gene_id: P0C509
symbol: rpoC2
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta'; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: P0C512
symbol: rbcL
gene_biotype: protein_coding
description:
  Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site.


ensembl_gene_id: P0C515
symbol: ycf4
gene_biotype: protein_coding
description:
  Photosystem I assembly protein Ycf4; Seems to be required for the assembly of the photosystem I complex; Belongs to the Ycf4 family.


ensembl_gene_id: P0C519
symbol: ATP9
gene_biotype: protein_coding
description:
  ATP synthase subunit 9, mitochondrial; This protein is one of the chains of the nonenzymatic membrane component (F0) of mitochondrial ATPase.


ensembl_gene_id: P0C522
symbol: ATPA
gene_biotype: protein_coding
description:
  ATP synthase subunit alpha, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the  [...]


ensembl_gene_id: P0C524
symbol: MT-CYB
gene_biotype: protein_coding
description:
  Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.


ensembl_gene_id: P0C540
symbol: ACT7
gene_biotype: protein_coding
description:
  Actin-7; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells; Belongs to the actin family.


ensembl_gene_id: P0C541
symbol: OsJ_015672
gene_biotype: protein_coding
description:
  Coatomer subunit epsilon-2; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity).


ensembl_gene_id: P0C579
symbol: CYT10_ORYSJ
gene_biotype: protein_coding
description:
  Cysteine proteinase inhibitor 10; Specific inhibitor of cysteine proteinases. Probably involved in the regulation of endogenous processes and in defense against pests and pathogens (By similarity); Belongs to the cystatin family. Phytocystatin subfamily.


ensembl_gene_id: P0C587
symbol: HEM1_ORYSJ
gene_biotype: protein_coding
description:
  Glutamyl-tRNA reductase, chloroplastic; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: P0C5B3
symbol: MT1A
gene_biotype: protein_coding
description:
  Metallothionein-like protein 1A; Metallothioneins have a high content of cysteine residues that bind various heavy metals. May be involved in ROS homeostasis. May act as reactive oxygen species (ROS) scavenger in response to salt stress.


ensembl_gene_id: P0C5C9
symbol: OJ1340_C08.107
gene_biotype: protein_coding
description:
  1-Cys peroxiredoxin A; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively (By similarity). Seems to contribute to the inhibition of germination during stress.


ensembl_gene_id: P0C5D1
symbol: OJ1340_C08.108
gene_biotype: protein_coding
description:
  1-Cys peroxiredoxin B; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively (By similarity). Seems to contribute to the inhibition of germination during stress (By similarity). Belongs to the peroxiredoxin family. Prx6 subfamily.


ensembl_gene_id: P0C5D5
symbol: OsJ_019618
gene_biotype: protein_coding
description:
  Peroxiredoxin Q, chloroplastic; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.


ensembl_gene_id: P0C5D6
symbol: SAPK3
gene_biotype: protein_coding
description:
  Serine/threonine-protein kinase SAPK3; May play a role in signal transduction of hyperosmotic response; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: P0CD22
symbol: ndhB1
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic; NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Belongs to the complex I subunit 2 family.


ensembl_gene_id: P0CD23
symbol: ndhB2
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic; NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Belongs to the complex I subunit 2 family.


ensembl_gene_id: P0CH34
symbol: Ub-CEP52-1
gene_biotype: protein_coding
description:
  Ubiquitin-60S ribosomal protein L40-1; [Ubiquitin]: exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is inv [...]


ensembl_gene_id: P0CH35
symbol: Ub-CEP52-2
gene_biotype: protein_coding
description:
  Ubiquitin-60S ribosomal protein L40-2; [Ubiquitin]: exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is inv [...]


ensembl_gene_id: P0DH88
symbol: OJ1014H12.2
gene_biotype: protein_coding
description:
  Barley B recombinant-like protein A; Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes; Belongs to the BBR/BPC family.


ensembl_gene_id: P0DH89
symbol: BBRB_ORYSJ
gene_biotype: protein_coding
description:
  Barley B recombinant-like protein B; Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes; Belongs to the BBR/BPC family.


ensembl_gene_id: P0DKG9
symbol: NRT2.1
gene_biotype: protein_coding
description:
  High-affinity nitrate transporter 2.1; Involved in nitrate transport, but does not seem to be able to mediate transport by its own. Acts as a dual component transporter with NAR2.1. Imports nitrate with high affinity when expressed with NAR2.1 in a heterologous system (Xenopus oocytes).


ensembl_gene_id: P0DKH0
symbol: NRT2.2
gene_biotype: protein_coding
description:
  High-affinity nitrate transporter 2.2; Involved in nitrate transport, but does not seem to be able to mediate transport by its own. Acts as a dual component transporter with NAR2.1. Imports nitrate with high affinity when expressed with NAR2.1 in a heterologous system (Xenopus oocytes).


ensembl_gene_id: P0DKJ9
symbol: RPT1A
gene_biotype: protein_coding
description:
  26S proteasome regulatory subunit 7A; The 26S proteasome is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex (By similarity).


ensembl_gene_id: P0DKK0
symbol: RPT1B
gene_biotype: protein_coding
description:
  26S proteasome regulatory subunit 7B; The 26S proteasome is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex (By similarity).


ensembl_gene_id: P0DKK3
symbol: PAC1A
gene_biotype: protein_coding
description:
  Proteasome subunit alpha type-4-1; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity; Belongs to the peptidase T1A family.


ensembl_gene_id: P0DKK4
symbol: P0015E04.34
gene_biotype: protein_coding
description:
  Proteasome subunit alpha type-4-3; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity; Belongs to the peptidase T1A family.


ensembl_gene_id: P0DKK6
symbol: LAC13
gene_biotype: protein_coding
description:
  Laccase-13; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family.


ensembl_gene_id: P0DO01
symbol: DJA7A
gene_biotype: protein_coding
description:
  Chaperone protein dnaJ A7A, chloroplastic; Plays pivotal roles in chloroplast development. Is essential for the regulation of chloroplast development and differentiation. Belongs to the DnaJ family.


ensembl_gene_id: P0DO02
symbol: DJA7B
gene_biotype: protein_coding
description:
  Chaperone protein dnaJ A7B, chloroplastic; Plays pivotal roles in chloroplast development. Is essential for the regulation of chloroplast development and differentiation. Belongs to the DnaJ family.


ensembl_gene_id: P0DO03
symbol: DJA8
gene_biotype: protein_coding
description:
  Chaperone protein dnaJ A8, chloroplastic; Plays pivotal roles in chloroplast development. Is essential for the regulation of chloroplast development and differentiation. Belongs to the DnaJ family.


ensembl_gene_id: P12085
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase subunit beta, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: P12123
symbol: petB
gene_biotype: protein_coding
description:
  Cytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.


ensembl_gene_id: P12124
symbol: ndhA
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic; NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Belongs to the complex I subunit 1 family.


ensembl_gene_id: P12139
symbol: rpl20
gene_biotype: protein_coding
description:
  50S ribosomal protein L20, chloroplastic; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (By similarity).


ensembl_gene_id: P12149
symbol: rps12-A
gene_biotype: protein_coding
description:
  30S ribosomal protein S12, chloroplastic; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits (By similarity).


ensembl_gene_id: P12153
symbol: rps19-A
gene_biotype: protein_coding
description:
  30S ribosomal protein S19, chloroplastic; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: P12180
symbol: petL
gene_biotype: protein_coding
description:
  Cytochrome b6-f complex subunit 6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. PetL is important for photoautotrophic growth as well as for electron transfer efficiency and stability of the cytochrome b6-f complex.


ensembl_gene_id: P12186
symbol: psaI
gene_biotype: protein_coding
description:
  Photosystem I reaction center subunit VIII; May help in the organization of the PsaL subunit. Belongs to the PsaI family.


ensembl_gene_id: P12189
symbol: psbJ
gene_biotype: protein_coding
description:
  Photosystem II reaction center protein J; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.


ensembl_gene_id: P12192
symbol: psaJ
gene_biotype: protein_coding
description:
  Photosystem I reaction center subunit IX; May help in the organization of the PsaE and PsaF subunits. Belongs to the PsaJ family.


ensembl_gene_id: P12194
symbol: psbZ
gene_biotype: protein_coding
description:
  Photosystem II reaction center protein Z; Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna; Belongs to the PsbZ family.


ensembl_gene_id: P12203
symbol: ycf3
gene_biotype: protein_coding
description:
  Photosystem I assembly protein Ycf3; Essential for the assembly of the photosystem I (PSI) complex. May act as a chaperone-like factor to guide the assembly of the PSI subunits.


ensembl_gene_id: P12212
symbol: cemA
gene_biotype: protein_coding
description:
  Chloroplast envelope membrane protein; May be involved in proton extrusion. Indirectly promotes efficient inorganic carbon uptake into chloroplasts. Belongs to the Cema family.


ensembl_gene_id: P12330
symbol: CAB1R
gene_biotype: protein_coding
description:
  Chlorophyll a-b binding protein 1, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.


ensembl_gene_id: P12331
symbol: CAB2R
gene_biotype: protein_coding
description:
  Chlorophyll a-b binding protein 2, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.


ensembl_gene_id: P14578
symbol: COX1
gene_biotype: protein_coding
description:
  Cytochrome c oxidase subunit 1; Component of the cytochrome c oxidase, the last enzyme in the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol- cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and t [...]


ensembl_gene_id: P14654
symbol: GLN1-2
gene_biotype: protein_coding
description:
  Glutamine synthetase cytosolic isozyme 1-2; High-affinity glutamine synthetase. May play a role in the primary assimilation of ammonium taken up by roots.


ensembl_gene_id: P14655
symbol: GLN2
gene_biotype: protein_coding
description:
  Glutamine synthetase, chloroplastic; The light-modulated chloroplast enzyme, encoded by a nuclear gene and expressed primarily in leaves, is responsible for the reassimilation of the ammonia generated by photorespiration. Belongs to the glutamine synthetase family.


ensembl_gene_id: P14656
symbol: GLN1-1
gene_biotype: protein_coding
description:
  Glutamine synthetase cytosolic isozyme 1-1; High-affinity glutamine synthetase. May be a major component of the cytosolic glutamine synthetic pathway in leaf blades.


ensembl_gene_id: P14717
symbol: PAL
gene_biotype: protein_coding
description:
  Phenylalanine ammonia-lyase; This is a key enzyme of plant metabolism catalyzing the first reaction in the biosynthesis from L-phenylalanine of a wide variety of natural products based on the phenylpropane skeleton.


ensembl_gene_id: P15280
symbol: AGPS2
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase small subunit 2, chloroplastic/amyloplastic/cytosolic; Involved in synthesis of starch. Catalyzes the synthesis of ADP-glucose, a molecule that serves as an activated glycosyl donor for alpha-1,4-glucan synthesis. The chloroplastic isoform 1 is essential for starch synthesis in leaf chloroplasts and the cytosolic isoform 2 for synthesis in seed endosperm.


ensembl_gene_id: P16081
symbol: NIA1
gene_biotype: protein_coding
description:
  Nitrate reductase [NADH] 1; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.


ensembl_gene_id: P17048
symbol: PROLM25
gene_biotype: protein_coding
description:
  13 kDa prolamin C; Seed storage protein; serves as a source of nitrogen, carbon and sulfur for the young developing seedling; Belongs to the prolamin family.


ensembl_gene_id: P17070
symbol: OJ1548_F12.18
gene_biotype: protein_coding
description:
  Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand.


ensembl_gene_id: P17654
symbol: AMY1.1
gene_biotype: protein_coding
description:
  Alpha-amylase; Important for breakdown of endosperm starch during germination; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: P17784
symbol: FBA1
gene_biotype: protein_coding
description:
  Fructose-bisphosphate aldolase 1, cytoplasmic; Fructose-bisphosphate aldolase that plays a key role in glycolysis and gluconeogenesis (By similarity). Involved in gibberellin-mediated root growth. May be regulated by CDPK13. Associates with vacuolar proton ATPase (V-ATPase) and may regulate the V-ATPase-mediated control of root cell elongation.


ensembl_gene_id: P18566
symbol: RBCS-A
gene_biotype: protein_coding
description:
  Ribulose bisphosphate carboxylase small chain A, chloroplastic; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (By similarity).


ensembl_gene_id: P20698
symbol: PRO28_ORYSJ
gene_biotype: protein_coding
description:
  Prolamin PPROL 17D; Seed storage protein; serves as a source of nitrogen, carbon and sulfur for the young developing seedling.


ensembl_gene_id: P20907
symbol: OJ1579_G03.3
gene_biotype: protein_coding
description:
  Cysteine proteinase inhibitor 2; There are two distinct cystatins in rice seeds (Oryzacystatin-1 and -2) with different specificities against cysteine proteinases. May be involved in the control of germination by inhibition of endogenous cysteine proteinases. May play a role in defense by inhibiting exogenous proteases such as those present in digestive tracks of insects and nematodes. Belongs to the cystatin family. Phytocystatin subfamily.


ensembl_gene_id: P24626
symbol: Cht3
gene_biotype: protein_coding
description:
  Chitinase 3; Hydrolyzes chitin and plays a role in defense against fungal pathogens containing chitin. Inhibits the growth of T.reesei fungus on plate assay.


ensembl_gene_id: P25765
symbol: Cht12
gene_biotype: protein_coding
description:
  Chitinase 12; Hydrolyzes chitin and plays a role in defense against fungal pathogens containing chitin. Its overexpression confers enhanced resistance to sheath blight pathogen (R.solani).


ensembl_gene_id: P27934
symbol: AMY1.4
gene_biotype: protein_coding
description:
  Alpha-amylase isozyme 3E; Important for breakdown of endosperm starch during germination; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: P28520
symbol: RPS12
gene_biotype: protein_coding
description:
  Ribosomal protein S12, mitochondrial; Protein S12 is involved in the translation initiation step; Belongs to the universal ribosomal protein uS12 family.


ensembl_gene_id: P28752
symbol: TUBA1
gene_biotype: protein_coding
description:
  Tubulin alpha-1 chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain; Belongs to the tubulin family.


ensembl_gene_id: P28757
symbol: SODCC2
gene_biotype: protein_coding
description:
  Superoxide dismutase [Cu-Zn] 2; Destroys radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the Cu-Zn superoxide dismutase family.


ensembl_gene_id: P29250
symbol: LOX1.1
gene_biotype: protein_coding
description:
  Linoleate 9S-lipoxygenase 2; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. Catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure.


ensembl_gene_id: P29421
symbol: RASI
gene_biotype: protein_coding
description:
  Alpha-amylase/subtilisin inhibitor; This protein inhibits independently subtilisin and T.castaneum alpha-amylase but not barley alpha-amylase.


ensembl_gene_id: P29545
symbol: P0453E03.116
gene_biotype: protein_coding
description:
  Elongation factor 1-beta; EF-1-beta and EF-1-beta' stimulate the exchange of GDP bound to EF-1-alpha to GTP; Belongs to the EF-1-beta/EF-1-delta family.


ensembl_gene_id: P29619
symbol: CDKA-2
gene_biotype: protein_coding
description:
  Cyclin-dependent kinase A-2; Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily.


ensembl_gene_id: P29620
symbol: CDKD-1
gene_biotype: protein_coding
description:
  Cyclin-dependent kinase D-1; CDK-activating kinase that may control G1/S phase progression. May control the rate of cell differentiation to accomplish proper development of organs, or in response to a changing environment. Forms a complex with cyclin CYCH1-1 that phosphorylates CDKA-1 and the C-terminal domain (CTD) of the large subunit of RNA polymerase II.


ensembl_gene_id: P30298
symbol: SUS2
gene_biotype: protein_coding
description:
  Sucrose synthase 2; Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways (By similarity). Functions in developing seeds by supplying substrates for the biosynthesis of storage products ; Belongs to the glycosyltransferase 1 family. Plant sucrose synthase subfamily.


ensembl_gene_id: P31691
symbol: OJ2056_H01.33
gene_biotype: protein_coding
description:
  ADP,ATP carrier protein, mitochondrial; Catalyzes the exchange of ADP and ATP across the mitochondrial inner membrane; Belongs to the mitochondrial carrier (TC 2.A.29) family.


ensembl_gene_id: P31924
symbol: SUS1
gene_biotype: protein_coding
description:
  Sucrose synthase 1; Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways; Belongs to the glycosyltransferase 1 family. Plant sucrose synthase subfamily.


ensembl_gene_id: P35681
symbol: TCTP
gene_biotype: protein_coding
description:
  Translationally-controlled tumor protein homolog; Involved in calcium binding and microtubule stabilization. Belongs to the TCTP family.


ensembl_gene_id: P35683
symbol: OsJ_22532
gene_biotype: protein_coding
description:
  Eukaryotic initiation factor 4A-1; ATP-dependent RNA helicase which is a subunit of the eIF4F complex involved in cap recognition and is required for mRNA binding to ribosome. In the current model of translation initiation, eIF4A unwinds RNA secondary structures in the 5'-UTR of mRNAs which is necessary to allow efficient binding of the small ribosomal subunit, and subsequent scanning for the initiator codon (By similarity).


ensembl_gene_id: P35684
symbol: RPL3
gene_biotype: protein_coding
description:
  60S ribosomal protein L3; The L3 protein is a component of the large subunit of cytoplasmic ribosomes; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: P37398
symbol: VP1
gene_biotype: protein_coding
description:
  B3 domain-containing protein VP1; Probable transcription factor that may participate in abscisic acid-regulated gene expression during seed development. May be required for seed maturation and dormancy induction.


ensembl_gene_id: P37832
symbol: TUBB7
gene_biotype: protein_coding
description:
  Tubulin beta-7 chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.


ensembl_gene_id: P37833
symbol: P0460E08.21
gene_biotype: protein_coding
description:
  Aspartate aminotransferase, cytoplasmic; Important for the metabolism of amino acids and Krebs-cycle related organic acids. In plants, it is involved in nitrogen metabolism and in aspects of carbon and energy metabolism; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: P37834
symbol: PRX74
gene_biotype: protein_coding
description:
  Peroxidase 1; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.


ensembl_gene_id: P38385
symbol: OsJ_05608
gene_biotype: protein_coding
description:
  Protein transport protein Sec61 subunit gamma; Necessary for protein translocation in the endoplasmic reticulum.


ensembl_gene_id: P38419
symbol: CM-LOX1
gene_biotype: protein_coding
description:
  Lipoxygenase 7, chloroplastic; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. This lipoxygenase introduces molecular oxygen exclusively into the C-13 position of linoleic and linolenic acids.


ensembl_gene_id: P40392
symbol: RIC1
gene_biotype: protein_coding
description:
  Ras-related protein RIC1; Possesses GTPase activity; Belongs to the small GTPase superfamily. Rab family.


ensembl_gene_id: P40393
symbol: RIC2
gene_biotype: protein_coding
description:
  Ras-related protein RIC2; Possesses GTPase activity; Belongs to the small GTPase superfamily. Rab family.


ensembl_gene_id: P41095
symbol: P0582D05.130-1
gene_biotype: protein_coding
description:
  60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.


ensembl_gene_id: P41344
symbol: LFNR1
gene_biotype: protein_coding
description:
  Ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic; May play a key role in regulating the relative amounts of cyclic and non-cyclic electron flow to meet the demands of the plant for ATP and reducing power.


ensembl_gene_id: P41345
symbol: OsJ_12850
gene_biotype: protein_coding
description:
  Ferredoxin--NADP reductase, root isozyme, chloroplastic; May play a key role in regulating the relative amounts of cyclic and non-cyclic electron flow to meet the demands of the plant for ATP and reducing power. Is involved in nitrate assimilation; Belongs to the ferredoxin--NADP reductase type 1 family.


ensembl_gene_id: P42211
symbol: RAP
gene_biotype: protein_coding
description:
  Aspartic proteinase; Involved in the breakdown of propeptides of storage proteins in protein-storage vacuoles; Belongs to the peptidase A1 family.


ensembl_gene_id: P42553
symbol: S1FA1
gene_biotype: protein_coding
description:
  DNA-binding protein S1FA1; DNA-binding protein that specifically recognizes a negative element (S1F) within the RPS1 promoter; Belongs to the S1FA transcription factor family.


ensembl_gene_id: P43279
symbol: ME6
gene_biotype: protein_coding
description:
  NADP-dependent malic enzyme, chloroplastic; The chloroplastic ME isoform decarboxylates malate shuttled from neighboring mesophyll cells. The CO(2) released is then refixed by ribulose-bisphosphate carboxylase. This pathway eliminates the photorespiratory loss of CO(2) that occurs in most plants.


ensembl_gene_id: P45960
symbol: TUBB4
gene_biotype: protein_coding
description:
  Tubulin beta-4 chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain; Belongs to the tubulin family.


ensembl_gene_id: P46265
symbol: TUBB5
gene_biotype: protein_coding
description:
  Tubulin beta-5 chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.


ensembl_gene_id: P46465
symbol: TBP1
gene_biotype: protein_coding
description:
  26S proteasome regulatory subunit 6A homolog; The 26S proteasome is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex (By similarity).


ensembl_gene_id: P46466
symbol: TBP2
gene_biotype: protein_coding
description:
  26S proteasome regulatory subunit 4 homolog; The 26S proteasome is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex (By similarity).


ensembl_gene_id: P46520
symbol: EMP1
gene_biotype: protein_coding
description:
  Embryonic abundant protein 1; Em protein may act as a cytoplasm protectant during desiccation; Belongs to the small hydrophilic plant seed protein family.


ensembl_gene_id: P46609
symbol: OSH1
gene_biotype: protein_coding
description:
  Homeobox protein knotted-1-like 6; Transcription factor that regulates genes involved in development. May be involved in shoot formation during embryogenesis. Overexpression in transgenic plants causes altered leaf morphology. Regulates anther dehiscence via direct repression of the auxin biosynthetic gene YUCCA4. Binds to the DNA sequence 5'-TGAC-3' in the promoter of the YUCCA4 gene and represses its activity during anther development. Reduction of auxin levels at late stage of anther development, after meiosis of microspore mother cells, is necessary for normal anther dehiscence and [...]


ensembl_gene_id: P48599
symbol: OJ1656_A11.43
gene_biotype: protein_coding
description:
  Eukaryotic translation initiation factor 4E-1; Component of the protein complex eIF4F, which is involved in the recognition of the mRNA cap, ATP-dependent unwinding of 5'-terminal secondary structure and recruitment of mRNA to the ribosome. Recognizes and binds the 7-methylguanosine-containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures.


ensembl_gene_id: P48600
symbol: OsJ_31838
gene_biotype: protein_coding
description:
  Eukaryotic translation initiation factor isoform 4E-2; Recognizes and binds the 7-methylguanosine-containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures.


ensembl_gene_id: P49027
symbol: RACK1A
gene_biotype: protein_coding
description:
  Guanine nucleotide-binding protein subunit beta-like protein A; Component of the RACK1 regulatory proteins that functions in innate immunity by interacting with multiple proteins in the RAC1 immune complex. Acts as positive regulator of reactive oxygen species (ROS) production and is required for resistance against rice blast (M.grisea) infection.


ensembl_gene_id: P49030
symbol: MAGO2
gene_biotype: protein_coding
description:
  Protein mago nashi homolog 2; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the core components remain bound to spliced mRNAs throughout all stages of mRNA metabolism thereby in [...]


ensembl_gene_id: P49100
symbol: OsJ_16839
gene_biotype: protein_coding
description:
  Cytochrome b5; Membrane bound hemoprotein which function as an electron carrier for several membrane bound oxygenases; Belongs to the cytochrome b5 family.


ensembl_gene_id: P49661
symbol: P0460C04.25
gene_biotype: protein_coding
description:
  Coatomer subunit delta-3; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity).


ensembl_gene_id: P49964
symbol: SRP19
gene_biotype: protein_coding
description:
  Signal recognition particle 19 kDa protein; Signal-recognition-particle assembly, binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP.


ensembl_gene_id: P50156
symbol: TIP1-1
gene_biotype: protein_coding
description:
  Probable aquaporin TIP1-1; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes. May be involved in transport from the vacuolar compartment to the cytoplasm (By similarity). Belongs to the MIP/aquaporin (TC 1.A.8) family. TIP (TC 1.A.8.10) subfamily.


ensembl_gene_id: P51431
symbol: RPS27AB
gene_biotype: protein_coding
description:
  Ubiquitin-40S ribosomal protein S27a-2; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is invol [...]


ensembl_gene_id: P51823
symbol: ARF
gene_biotype: protein_coding
description:
  ADP-ribosylation factor 2; GTP-binding protein involved in protein trafficking; may modulate vesicle budding and uncoating within the Golgi apparatus; Belongs to the small GTPase superfamily. Arf family.


ensembl_gene_id: P52428
symbol: PAF1
gene_biotype: protein_coding
description:
  Proteasome subunit alpha type-1; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity; Belongs to the peptidase T1A family.


ensembl_gene_id: P53682
symbol: CPK23
gene_biotype: protein_coding
description:
  Calcium-dependent protein kinase 23; May play a role in signal transduction pathways that involve calcium as a second messenger (By similarity). Involved in the activation of sucrose synthase 2 (SUS2) in developing seeds. Phosphorylates SUS2 at Ser-10 in a calcium-dependent manner. Phosphorylation of Ser-10 leads to the activation of SUS2, which supplies substrates for the biosynthesis of storage products in immature seeds ; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.


ensembl_gene_id: P53683
symbol: CPK19
gene_biotype: protein_coding
description:
  Calcium-dependent protein kinase 19; May play a role in signal transduction pathways that involve calcium as a second messenger; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.


ensembl_gene_id: P53684
symbol: CPK7
gene_biotype: protein_coding
description:
  Calcium-dependent protein kinase 7; May play a role in signal transduction pathways that involve calcium as a second messenger (By similarity). May be a signaling component in the response to gibberellin and cold stress.


ensembl_gene_id: P55142
symbol: GRXC6
gene_biotype: protein_coding
description:
  Glutaredoxin-C6; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins. Possesses thioltransferase, dehydroascorbate reductase and GSH-dependent peroxidase activities in vitro; Belongs to the glutaredoxin family. CPYC subfamily.


ensembl_gene_id: P55857
symbol: SUMO1
gene_biotype: protein_coding
description:
  Small ubiquitin-related modifier 1; Ubiquitin-like protein which can be covalently attached to target lysines as a monomer. Does not seem to be involved in protein degradation and may function as an antagonist of ubiquitin in the degradation process (By similarity).


ensembl_gene_id: P56724
symbol: P0596H10.6
gene_biotype: protein_coding
description:
  60S acidic ribosomal protein P3; Plays an important role in the elongation step of protein synthesis; Belongs to the eukaryotic ribosomal protein P1/P2 family.


ensembl_gene_id: P60137
symbol: psbL
gene_biotype: protein_coding
description:
  Photosystem II reaction center protein L; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface and is required for correct PSII assembly and/or dimerization.


ensembl_gene_id: P61042
symbol: petN
gene_biotype: protein_coding
description:
  Cytochrome b6-f complex subunit 8; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.


ensembl_gene_id: P69674
symbol: psbT
gene_biotype: protein_coding
description:
  Photosystem II reaction center protein T; Seems to play a role in the dimerization of PSII. Belongs to the PsbT family.


ensembl_gene_id: P93407
symbol: SODCP
gene_biotype: protein_coding
description:
  Superoxide dismutase [Cu-Zn], chloroplastic; Destroys radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the Cu-Zn superoxide dismutase family.


ensembl_gene_id: P93431
symbol: RCA
gene_biotype: protein_coding
description:
  Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic; Activation of RuBisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase; EC 4.1.1.39) involves the ATP-dependent carboxylation of the epsilon-amino group of lysine leading to a carbamate structure.


ensembl_gene_id: P93438
symbol: SAM2
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthase 2; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The reaction comprises two steps that are both catalyzed by the same enzyme: formation of S-adenosylmethionine (AdoMet) and triphosphate, and subsequent hydrolysis of the triphosphate.


ensembl_gene_id: P93771
symbol: GA20OX1
gene_biotype: protein_coding
description:
  Gibberellin 20 oxidase 1; Key oxidase enzyme in the biosynthesis of gibberellin (Ref.1,. Catalyzes the conversion of GA12 and GA53 to GA9 and GA20 respectively, via a three-step oxidation at C-20 of the GA skeleton.


ensembl_gene_id: P93844
symbol: PLD2
gene_biotype: protein_coding
description:
  Phospholipase D alpha 2; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond. Plays an important role in various cellular processes; Belongs to the phospholipase D family. C2-PLD subfamily.


ensembl_gene_id: P94029
symbol: MT2A
gene_biotype: protein_coding
description:
  Metallothionein-like protein 2A; Metallothioneins have a high content of cysteine residues that bind various heavy metals.


ensembl_gene_id: Q01401
symbol: SBE1
gene_biotype: protein_coding
description:
  1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic; Catalyzes the formation of the alpha-1,6-glucosidic linkages in starch by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.


ensembl_gene_id: Q01859
symbol: ATPB
gene_biotype: protein_coding
description:
  ATP synthase subunit beta, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the c [...]


ensembl_gene_id: Q01881
symbol: RA5
gene_biotype: protein_coding
description:
  Seed allergenic protein RA5; Seed storage protein; Belongs to the protease inhibitor I6 (cereal trypsin/alpha- amylase inhibitor) family.


ensembl_gene_id: Q01882
symbol: RAG2
gene_biotype: protein_coding
description:
  Seed allergenic protein RAG2; Seed storage protein; Belongs to the cereal trypsin/alpha-amylase inhibitor family.


ensembl_gene_id: Q01883
symbol: RAG1
gene_biotype: protein_coding
description:
  Seed allergenic protein RAG1; Seed storage protein; Belongs to the cereal trypsin/alpha-amylase inhibitor family.


ensembl_gene_id: Q03200
symbol: LIR1
gene_biotype: protein_coding
description:
  Light-regulated protein, chloroplastic; Thylakoid-determinant subunit of high molecular weight LFNRs- containing protein complexes.


ensembl_gene_id: Q05JG2
symbol: CYP707A5
gene_biotype: protein_coding
description:
  Abscisic acid 8'-hydroxylase 1; Involved in the oxidative degradation of abscisic acid; Belongs to the cytochrome P450 family.


ensembl_gene_id: Q06396
symbol: OsJ_03844
gene_biotype: protein_coding
description:
  ADP-ribosylation factor 1; GTP-binding protein involved in protein trafficking; may modulate vesicle budding and uncoating within the Golgi apparatus.


ensembl_gene_id: Q06397
symbol: DER1
gene_biotype: protein_coding
description:
  Derlin-1; May be involved in the degradation process of specific misfolded endoplasmic reticulum (ER) luminal proteins.


ensembl_gene_id: Q06398
symbol: GSTU6
gene_biotype: protein_coding
description:
  Probable glutathione S-transferase GSTU6; Conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles; Belongs to the GST superfamily. Tau family.


ensembl_gene_id: Q06967
symbol: GF14F
gene_biotype: protein_coding
description:
  14-3-3-like protein GF14-F; Is associated with a DNA binding complex that binds to the G box, a well-characterized cis-acting DNA regulatory element found in plant genes.


ensembl_gene_id: Q07078
symbol: HSP81-3
gene_biotype: protein_coding
description:
  Heat shock protein 81-3; Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co- chaperones that modulate its substrate recognition, ATPase cycle and chaperone function; Belongs to the heat shock protein 90 family.


ensembl_gene_id: Q07661
symbol: NDKR
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase 1; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. This NDK is microtubule-associated.


ensembl_gene_id: Q08479
symbol: ADK-A
gene_biotype: protein_coding
description:
  Adenylate kinase 3; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism.


ensembl_gene_id: Q08480
symbol: ADK-B
gene_biotype: protein_coding
description:
  Adenylate kinase 4; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism.


ensembl_gene_id: Q0D3B6
symbol: PRR37
gene_biotype: protein_coding
description:
  Two-component response regulator-like PRR37; Probable transcription factor involved in the regulation of flowering time under long day (LD) conditions. Functions as repressor of flowering. Controls flowering time by negatively regulating the expression of HD3A. Acts downstream of the phytochrome B to repress the expression of EHD1, an activator of the flowering promoter genes HD3A and RFT1. Controls photoperiodic flowering response. Seems to be one of the component of the circadian clock. Expression of several members of the ARR-like family is controlled by circadian rhythm. The partic [...]


ensembl_gene_id: Q0D3F2
symbol: NAS3
gene_biotype: protein_coding
description:
  Nicotianamine synthase 3; Synthesizes nicotianamine, a polyamine that is the first intermediate in the synthesis of the phytosiderophores of the mugineic acid type found in gramineae which serve as a sensor for the physiological iron status within the plant, and/or might be involved in the transport of iron; Belongs to the nicotianamine synthase (NAS)-like family.


ensembl_gene_id: Q0D3I7
symbol: WOX11
gene_biotype: protein_coding
description:
  WUSCHEL-related homeobox 11; Transcription factor involved in crown root development. Promotes the development of crown roots (both initiation and elongation), main components of the fibrous root system. Regulates the expression of genes required for crown root development, and hormone- responsive genes involved in cytokinin signaling (e.g. RR1, RR2, RR3 and RR4), and auxin signaling (e.g. IAA5, IAA11, IAA23 and IAA31). Functions dowstream of the auxin biosynthetic genes YUCCA1 in the promotion of crown root development.


ensembl_gene_id: Q0D3N0
symbol: PRX112
gene_biotype: protein_coding
description:
  Peroxidase 2; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.


ensembl_gene_id: Q0D3S3
symbol: OBGC1
gene_biotype: protein_coding
description:
  Probable GTP-binding protein OBGC1, chloroplastic; Probable GTP-binding protein that plays a crucial role in chloroplast development and is required for leaf greening during plant growth; Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: Q0D4B2
symbol: CIPK21
gene_biotype: protein_coding
description:
  CBL-interacting protein kinase 21; CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity); Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.


ensembl_gene_id: Q0D4G3
symbol: GL1-9
gene_biotype: protein_coding
description:
  Very-long-chain aldehyde decarbonylase GL1-9; Aldehyde decarbonylase involved in the conversion of aldehydes to alkanes. Core component of a very-long-chain alkane synthesis complex.


ensembl_gene_id: Q0D4J7
symbol: SAPK2
gene_biotype: protein_coding
description:
  Serine/threonine-protein kinase SAPK2; May play a role in signal transduction of hyperosmotic response (Probable). Can phosphorylate BZIP46 in vitro. Together with ABI5, PP2C30 and PYL5, is part of an abscisic acid (ABA) signaling unit that modulates seed germination and early seedling growth ; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q0D4T4
symbol: MADS18
gene_biotype: protein_coding
description:
  MADS-box transcription factor 18; Probable transcription factor that may promote floral transition phase and differentiation program of the vegetative shoot.


ensembl_gene_id: Q0D4Z6
symbol: GH3.8
gene_biotype: protein_coding
description:
  Probable indole-3-acetic acid-amido synthetase GH3.8; May catalyze the synthesis of indole-3-acetic acid (IAA)- amino acid conjugates, providing a mechanism for the plant to cope with the presence of excess auxin; Belongs to the IAA-amido conjugating enzyme family.


ensembl_gene_id: Q0D541
symbol: WNK5
gene_biotype: protein_coding
description:
  Probable serine/threonine-protein kinase WNK5; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. WNK subfamily.


ensembl_gene_id: Q0D576
symbol: HPT2
gene_biotype: protein_coding
description:
  Probable homogentisate phytyltransferase 2, chloroplastic; Involved in the synthesis of tocopherol (vitamin E). Catalyzes the condensation of homogentisate and phytyl diphosphate to form dimethylphytylhydrquinone (By similarity); Belongs to the UbiA prenyltransferase family.


ensembl_gene_id: Q0D5B9
symbol: SAP16
gene_biotype: protein_coding
description:
  Zinc finger AN1 and C2H2 domain-containing stress-associated protein 16; May be involved in environmental stress response.


ensembl_gene_id: Q0D5G1
symbol: Q0D5G1_ORYSJ
gene_biotype: protein_coding
description:
  Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.


ensembl_gene_id: Q0D5K8
symbol: Q0D5K8_ORYSJ
gene_biotype: protein_coding
description:
  Mitochondrial pyruvate carrier; Mediates the uptake of pyruvate into mitochondria. Belongs to the mitochondrial pyruvate carrier (MPC) (TC 2.A.105) family.


ensembl_gene_id: Q0D5R2
symbol: CRK10
gene_biotype: protein_coding
description:
  Cysteine-rich receptor-like protein kinase 10; Involved in disease resistance. Required for NPR1/NH1- mediated immunity to the bacterial blight pathogen Xanthomomas oryzae pv. oryzae (Xoo). Required for the benzothiadiazole (BTH)-induced immune response. Probably regulated by the transcription factor TGA2.1.


ensembl_gene_id: Q0D5R3
symbol: CRK6
gene_biotype: protein_coding
description:
  Cysteine-rich receptor-like protein kinase 6; Involved in disease resistance. Required for NPR1/NH1- mediated immunity to the bacterial blight pathogen Xanthomomas oryzae pv. oryzae (Xoo). Required for the benzothiadiazole (BTH)-induced immune response. Possesses kinase activity in vitro.


ensembl_gene_id: Q0D622
symbol: P0650C03.25
gene_biotype: protein_coding
description:
  DEAD-box ATP-dependent RNA helicase 32; Belongs to the DEAD box helicase family. DDX10/DBP4 subfamily.


ensembl_gene_id: Q0D6F4
symbol: TPP10
gene_biotype: protein_coding
description:
  Probable trehalose-phosphate phosphatase 10; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. Trehalose accumulation in plant may improve abiotic stress tolerance (By similarity).


ensembl_gene_id: Q0D6M1
symbol: URM1
gene_biotype: protein_coding
description:
  Ubiquitin-related modifier 1 homolog; Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins. The thiocarboxylated form serves as substrate for conjugation and oxidative stress spec [...]


ensembl_gene_id: Q0D6N1
symbol: Q0D6N1_ORYSJ
gene_biotype: protein_coding
description:
  Os07g0461900 protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: Q0D6V7
symbol: BOP1
gene_biotype: protein_coding
description:
  Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.


ensembl_gene_id: Q0D701
symbol: Q0D701_ORYSJ
gene_biotype: protein_coding
description:
  F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.


ensembl_gene_id: Q0D715
symbol: CPK18
gene_biotype: protein_coding
description:
  Calcium-dependent protein kinase 18; May play a role in signal transduction pathways that involve calcium as a second messenger (By similarity). Functions upstream of MPK5 in a signaling pathway that represses defense gene expression and negatively regulates resistance to rice blast fungus. Phosphorylates MPK5 at Thr-14 and Thr-32 and activates MPK5 independently of MAP kinase kinase (MKK) phosphorylation. May be involved in arbuscular mycorrhizal presymbiotic phase signaling. Phosphorylates the elicitor-responsive protein ERG1 in vitro. Phosphorylation is calcium-dependent.


ensembl_gene_id: Q0D744
symbol: ADF8
gene_biotype: protein_coding
description:
  Putative actin-depolymerizing factor 8; Actin-depolymerizing protein. Severs actin filaments (F- actin) and binds to actin monomers (By similarity).


ensembl_gene_id: Q0D7C9
symbol: Q0D7C9_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:001-038-B08, full insert sequence; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: Q0D7E4
symbol: NRAMP1
gene_biotype: protein_coding
description:
  Metal transporter Nramp1; Probable metal transporter that may participate in the control of iron homeostasis; Belongs to the NRAMP (TC 2.A.55) family.


ensembl_gene_id: Q0D7I3
symbol: AGPL4
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase large subunit 4, chloroplastic/amyloplastic; Involved in synthesis of starch. Catalyzes the synthesis of ADP-glucose, a molecule that serves as an activated glycosyl donor for alpha-1,4-glucan synthesis. Essential for starch synthesis in leaf chloroplasts.


ensembl_gene_id: Q0D7W4
symbol: Q0D7W4_ORYSJ
gene_biotype: protein_coding
description:
  Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.


ensembl_gene_id: Q0D840
symbol: TRXH
gene_biotype: protein_coding
description:
  Thioredoxin H1; Thiol-disulfide oxidoreductase involved in the redox regulation of MAP kinases. Under reducing conditions, inhibits MPK1 and MPK5 kinase activities. Mediates its own transport from cell-to-cell through plasmodesmata. Possesses insulin disulfide bonds reducing activity; Belongs to the thioredoxin family. Plant H-type subfamily.


ensembl_gene_id: Q0D847
symbol: WNK3
gene_biotype: protein_coding
description:
  Probable serine/threonine-protein kinase WNK3; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. WNK subfamily.


ensembl_gene_id: Q0D8D4
symbol: NADE_ORYSJ
gene_biotype: protein_coding
description:
  Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.


ensembl_gene_id: Q0D8G3
symbol: Q0D8G3_ORYSJ
gene_biotype: protein_coding
description:
  Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.


ensembl_gene_id: Q0D8I9
symbol: EIN2
gene_biotype: protein_coding
description:
  Protein ETHYLENE-INSENSITIVE 2; Central factor in ethylene signaling pathways that control development, senescence and grain size. Acts as positive component of the ethylene-signaling pathway.


ensembl_gene_id: Q0D9C4
symbol: CATB
gene_biotype: protein_coding
description:
  Catalase isozyme B; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide (By similarity). May prevent the excessive accumulation of H(2)O(2) during water stress in response to the accumulation of abscisic acid (ABA). Involved in the modulation of ROS levels related to root growth regulation. Required for pollen viability and floret fertility upon heat stress (HS) by detoxifying reactive oxygen species (ROS) and malondialdehyde (MDA) accumulation in developing anthers exposed to HS.


ensembl_gene_id: Q0D9C7
symbol: CYCB2-2
gene_biotype: protein_coding
description:
  Cyclin-B2-2; Involved in the control of the cell cycle at the G2/M (mitosis) transition. May associate to CDKB2-1 and activate CDKB2-1 kinase activity to promote cell division; Belongs to the cyclin family. Cyclin AB subfamily.


ensembl_gene_id: Q0D9J1
symbol: AMY2A
gene_biotype: protein_coding
description:
  Alpha-amylase isozyme 2A; Important for breakdown of endosperm starch during germination; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: Q0D9R7
symbol: ARF19
gene_biotype: protein_coding
description:
  Auxin response factor 19; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).


ensembl_gene_id: Q0D9S3
symbol: HKT1
gene_biotype: protein_coding
description:
  Cation transporter HKT1; Seems to be involved in regulation of K(+)/Na(+) homeostasis. Seems to act as a high-affinity sodium transporter, which mediates increased sodium uptake in roots under potassium deficiency and contributes to sodium accumulation and salt toxicity. May also act as a potassium transporter.


ensembl_gene_id: Q0D9V6
symbol: STAR1
gene_biotype: protein_coding
description:
  Protein STAR1; Associates with STAR2 to form a functional transmembrane ABC transporter required for detoxification of aluminum (Al) in roots. Can specifically transport UDP-glucose; Belongs to the ABC transporter superfamily. ABCI family.


ensembl_gene_id: Q0DA00
symbol: Q0DA00_ORYSJ
gene_biotype: protein_coding
description:
  T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.


ensembl_gene_id: Q0DAE4
symbol: GRXC8
gene_biotype: protein_coding
description:
  Glutaredoxin-C8; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins (By similarity); Belongs to the glutaredoxin family. CPYC subfamily.


ensembl_gene_id: Q0DAE8
symbol: SPL10
gene_biotype: protein_coding
description:
  Squamosa promoter-binding-like protein 10; Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'.


ensembl_gene_id: Q0DAJ3
symbol: WRKY28
gene_biotype: protein_coding
description:
  WRKY transcription factor WRKY28; Transcription repressor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Regulates, probably indirectly, the activation of defense-related genes during defense response (By similarity). Modulates plant innate immunity against X.oryzae pv. oryzae (Xoo). Regulates negatively the basal defense responses to the compatible fungus M.oryzae.


ensembl_gene_id: Q0DAK7
symbol: HGGT
gene_biotype: protein_coding
description:
  Homogentisate geranylgeranyltransferase, chloroplastic; Involved in the synthesis of tocotrienol (vitamin E). Catalyzes the condensation of homogentisate and geranylgeranyl diphosphate to form 2-methyl-6- geranylgeranylbenzoquinol. Possesses low activity with phytyl diphosphate as substrate (By similarity). Tocotrienols functions to limit lipid peroxidation during seed germination.


ensembl_gene_id: Q0DB53
symbol: P0486H12.18
gene_biotype: protein_coding
description:
  DEAD-box ATP-dependent RNA helicase 52A; Belongs to the DEAD box helicase family. DDX3/DED1 subfamily.


ensembl_gene_id: Q0DBD3
symbol: PP2A1
gene_biotype: protein_coding
description:
  Serine/threonine-protein phosphatase PP2A-1 catalytic subunit; Belongs to the PPP phosphatase family. PP-2A subfamily.


ensembl_gene_id: Q0DBF4
symbol: CYP701A8
gene_biotype: protein_coding
description:
  Ent-sandaracopimaradiene 3-hydroxylase; Catalyzes the hydroxylation of ent-sandaracopimaradiene at the C3alpha position to produce ent-3beta-hydroxy-sandaracopimaradiene, an intermediates for the biosynthesis of oryzalexin D and oryzalexin E phytoalexins. Catalyzes the hydroxylation of ent-cassadiene at the C3alpha position to produce 3alpha-hydroxy-ent-cassadiene, which may be an intermediate for the biosynthesis of phytocassane phytoalexins. Catalyzes the hydroxylation of syn-pimaradiene (9-beta-pimara-7,15-diene) at the C3beta position to produce 3-beta-syn-pimaradiene. Can hydroxyl [...]


ensembl_gene_id: Q0DBL6
symbol: HSFC2B
gene_biotype: protein_coding
description:
  Heat stress transcription factor C-2b; Transcriptional regulator that specifically binds DNA of heat shock promoter elements (HSE).


ensembl_gene_id: Q0DBM6
symbol: Q0DBM6_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:002-145-B05, full insert sequence; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.


ensembl_gene_id: Q0DBS1
symbol: OsJ_21574
gene_biotype: protein_coding
description:
  Putative DEAD-box ATP-dependent RNA helicase 51; Belongs to the DEAD box helicase family. DDX18/HAS1 subfamily.


ensembl_gene_id: Q0DC45
symbol: MLO1
gene_biotype: protein_coding
description:
  MLO protein homolog 1; May be involved in modulation of pathogen defense and leaf cell death. Activity seems to be regulated by Ca(2+)-dependent calmodulin binding and seems not to require heterotrimeric G proteins (By similarity).


ensembl_gene_id: Q0DC89
symbol: MSRB1
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase B1, chloroplastic; Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Involved in abiotic stress response. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. MSRB family specifically reduces the MetSO R-enantiomer.


ensembl_gene_id: Q0DCT8
symbol: B1026E06.38
gene_biotype: protein_coding
description:
  Protein kinase G11A; May play a role in the regulation of metabolism and signal transduction processes.


ensembl_gene_id: Q0DDE3
symbol: SSII-3
gene_biotype: protein_coding
description:
  Soluble starch synthase 2-3, chloroplastic/amyloplastic; Plays an important role during endosperm starch synthesis. Determines the type of amylopectin structure of starch grain. Synthesizes long B1 amylopectin chains by elongating short A and B1 chains, independently of the other soluble starch synthases. Barely active in japonica subspecies.


ensembl_gene_id: Q0DDF6
symbol: ILI4
gene_biotype: protein_coding
description:
  Transcription factor ILI4; Atypical and probable non DNA-binding bHLH transcription factor that acts as a positive regulator of brassinsteroid (BR) response. Controls lamina inclination by participating in two BR signaling pathways involving BRI1 and RGA1.


ensembl_gene_id: Q0DDI1
symbol: TPP8
gene_biotype: protein_coding
description:
  Probable trehalose-phosphate phosphatase 8; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. Trehalose accumulation in plant may improve abiotic stress tolerance (By similarity).


ensembl_gene_id: Q0DEB8
symbol: MADS5
gene_biotype: protein_coding
description:
  MADS-box transcription factor 5; Probable transcription factor. May be involved in the control of flowering time.


ensembl_gene_id: Q0DEC8
symbol: SS1
gene_biotype: protein_coding
description:
  Soluble starch synthase 1, chloroplastic/amyloplastic; Involved in starch synthesis in endosperm amyloplasts. Plays a role in the elongation of amylopectin chains. Synthesizes preferentially amylopectin chains with a degree of polymerization (DP) of 7 to 11 by elongating chains with a DP of 4 to 7. Generates distincly chains with a DP of 8 to 12 chains from short chains with a DP of 6 to 7.


ensembl_gene_id: Q0DEH4
symbol: COQ3
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.


ensembl_gene_id: Q0DEV5
symbol: WAXY
gene_biotype: protein_coding
description:
  Granule-bound starch synthase 1, chloroplastic/amyloplastic; Required for the synthesis of amylose in endosperm.


ensembl_gene_id: Q0DFC9
symbol: PETE
gene_biotype: protein_coding
description:
  Plastocyanin, chloroplastic; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I.


ensembl_gene_id: Q0DFG8
symbol: LOGL8
gene_biotype: protein_coding
description:
  Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL8; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms (By similarity).


ensembl_gene_id: Q0DFV9
symbol: Q0DFV9_ORYSJ
gene_biotype: protein_coding
description:
  Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.


ensembl_gene_id: Q0DG05
symbol: PSAH
gene_biotype: protein_coding
description:
  Photosystem I reaction center subunit VI, chloroplastic; Possible role could be the docking of the LHC I antenna complex to the core complex; Belongs to the psaH family.


ensembl_gene_id: Q0DG31
symbol: Q0DG31_ORYSJ
gene_biotype: protein_coding
description:
  Os05g0556100 protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.


ensembl_gene_id: Q0DG35
symbol: OJ1214_E03.1
gene_biotype: protein_coding
description:
  Glutamate synthase 2 [NADH], chloroplastic; Involved in glutamate biosynthesis; Belongs to the glutamate synthase family.


ensembl_gene_id: Q0DGS1
symbol: ARF14
gene_biotype: protein_coding
description:
  Auxin response factor 14; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).


ensembl_gene_id: Q0DHB7
symbol: EXPA4
gene_biotype: protein_coding
description:
  Expansin-A4; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Required for normal plant growth. May be required for rapid internodal elongation in deepwater rice during submergence.


ensembl_gene_id: Q0DHC4
symbol: MCM3
gene_biotype: protein_coding
description:
  DNA replication licensing factor MCM3; Probable component of the MCM2-7 complex (MCM complex) that may function as a DNA helicase and which is essential to undergo a single round of replication initiation and elongation per cell cycle in eukaryotic cells.


ensembl_gene_id: Q0DHE3
symbol: ZIP9
gene_biotype: protein_coding
description:
  Zinc transporter 9; Zinc transporter that may be involved in zinc uptake from the rhizosphere; Belongs to the ZIP transporter (TC 2.A.5) family.


ensembl_gene_id: Q0DHJ5
symbol: MTP6
gene_biotype: protein_coding
description:
  Metal tolerance protein 6; Involved in sequestration of excess metal in the cytoplasm into vacuoles to maintain metal homeostasis; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. SLC30A subfamily.


ensembl_gene_id: Q0DHK1
symbol: Q0DHK1_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J033125I20, full insert sequence; Belongs to the bacterial ribosomal protein bL17 family.


ensembl_gene_id: Q0DHL4
symbol: FTSH8
gene_biotype: protein_coding
description:
  ATP-dependent zinc metalloprotease FTSH 8, mitochondrial; Probable ATP-dependent zinc metallopeptidase; In the C-terminal section; belongs to the peptidase M41 family.


ensembl_gene_id: Q0DHL5
symbol: LAC11
gene_biotype: protein_coding
description:
  Putative laccase-11; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family.


ensembl_gene_id: Q0DI31
symbol: CC-1
gene_biotype: protein_coding
description:
  Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.


ensembl_gene_id: Q0DI48
symbol: MRL7L
gene_biotype: protein_coding
description:
  Thioredoxin-like fold domain-containing protein MRL7L homolog, chloroplastic; Plays an essential role in early steps of chloroplast development. Involved in the regulation of plastid gene expression. Required for the proper function of the plastid transcriptional machinery and protein accumulation in thylakoid membranes. May function as molecular chaperone to ensure proper organization of the nucleoids in chloroplasts.


ensembl_gene_id: Q0DIK0
symbol: Q0DIK0_ORYSJ
gene_biotype: protein_coding
description:
  Mitochondrial fission 1 protein; Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes.


ensembl_gene_id: Q0DIV0
symbol: P0530H10.9
gene_biotype: protein_coding
description:
  Ferrochelatase-2, chloroplastic; Catalyzes the ferrous insertion into protoporphyrin IX; Belongs to the ferrochelatase family.


ensembl_gene_id: Q0DJ33
symbol: GPA1
gene_biotype: protein_coding
description:
  Guanine nucleotide-binding protein alpha-1 subunit; Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems (Probable). May function in a signal transduction pathway required for normal growth and development of internodes, leaves, panicles and seeds. Involved in gibberellin signal transduction. Involved in R gene-mediated disease resistance. Functions upstream of the small GTPase RAC1 in the early steps of signaling. Involved in brassinosteroid (BR) response. May not be a signaling molecule in BRI1-mediated  [...]


ensembl_gene_id: Q0DJ45
symbol: PROLM7
gene_biotype: protein_coding
description:
  Prolamin PPROL 14E; Seed storage protein; serves as a source of nitrogen, carbon and sulfur for the young developing seedling.


ensembl_gene_id: Q0DJ61
symbol: Q0DJ61_ORYSJ
gene_biotype: protein_coding
description:
  Os05g0324200 protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.


ensembl_gene_id: Q0DJ62
symbol: Q0DJ62_ORYSJ
gene_biotype: protein_coding
description:
  Os05g0324100 protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.


ensembl_gene_id: Q0DJ99
symbol: COPD2_ORYSJ
gene_biotype: protein_coding
description:
  Coatomer subunit delta-2; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity).


ensembl_gene_id: Q0DJA0
symbol: COPD1_ORYSJ
gene_biotype: protein_coding
description:
  Coatomer subunit delta-1; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity).


ensembl_gene_id: Q0DJB6
symbol: Q0DJB6_ORYSJ
gene_biotype: protein_coding
description:
  Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.


ensembl_gene_id: Q0DJC0
symbol: Q0DJC0_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:001-036-B04, full insert sequence; Belongs to the mitochondrial carrier (TC 2.A.29) family.


ensembl_gene_id: Q0DJC5
symbol: OST1A
gene_biotype: protein_coding
description:
  Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1A; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the e [...]


ensembl_gene_id: Q0DJC7
symbol: SAP15
gene_biotype: protein_coding
description:
  Zinc finger AN1 domain-containing stress-associated protein 15; May be involved in environmental stress response.


ensembl_gene_id: Q0DJE6
symbol: Q0DJE6_ORYSJ
gene_biotype: protein_coding
description:
  Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.


ensembl_gene_id: Q0DJH7
symbol: AT5
gene_biotype: protein_coding
description:
  Acyl transferase 5; Involved in the incorporation of ferulate into the cell wall. May act as arabinoxylan feruloyl transferase. Belongs to the plant acyltransferase family.


ensembl_gene_id: Q0DJS1
symbol: TOR
gene_biotype: protein_coding
description:
  Serine/threonine-protein kinase TOR; Component of TORC1 complex, which is an essential cell growth regulator that controls plant development. Acts through the phosphorylation of downstream effectors that are recruited by the binding partner RAPTOR. Acts by activating transcription, protein synthesis and ribosome biogenesis, and inhibiting mRNA degradation and autophagy.


ensembl_gene_id: Q0DJU1
symbol: Q0DJU1_ORYSJ
gene_biotype: protein_coding
description:
  Eukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.


ensembl_gene_id: Q0DJY3
symbol: SWEET3A
gene_biotype: protein_coding
description:
  Bidirectional sugar transporter SWEET3a; Mediates both low-affinity uptake and efflux of sugar across the plasma membrane.


ensembl_gene_id: Q0DK10
symbol: RPL11
gene_biotype: protein_coding
description:
  60S ribosomal protein L11; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through [...]


ensembl_gene_id: Q0DK16
symbol: NIP1-3
gene_biotype: protein_coding
description:
  Aquaporin NIP1-3; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes; Belongs to the MIP/aquaporin (TC 1.A.8) family. NIP (TC 1.A.8.12) subfamily.


ensembl_gene_id: Q0DK35
symbol: GRXC7
gene_biotype: protein_coding
description:
  Glutaredoxin-C7; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins (By similarity); Belongs to the glutaredoxin family. CC-type subfamily.


ensembl_gene_id: Q0DK78
symbol: PHP2
gene_biotype: protein_coding
description:
  Pseudo histidine-containing phosphotransfer protein 2; Functions as two-component phosphorelay mediators between cytokinin sensor histidine kinases and response regulators (B-type ARRs). Plays an important role in propagating cytokinin signal transduction.


ensembl_gene_id: Q0DKA5
symbol: AT7
gene_biotype: protein_coding
description:
  Acyl transferase 7; Involved in the incorporation of ferulate into the cell wall. May act as arabinoxylan feruloyl transferase. Belongs to the plant acyltransferase family.


ensembl_gene_id: Q0DKE8
symbol: TAR1
gene_biotype: protein_coding
description:
  Tryptophan aminotransferase-related protein 1; Probable tryptophan aminotransferase that may be involved in the regulation of auxin production in developing rice grains. Belongs to the alliinase family.


ensembl_gene_id: Q0DKF1
symbol: OsJ_17272
gene_biotype: protein_coding
description:
  Thioredoxin H4-2; Probable thiol-disulfide oxidoreductase that may be involved in the redox regulation of a number of cytosolic enzymes; Belongs to the thioredoxin family. Plant H-type subfamily.


ensembl_gene_id: Q0DKM0
symbol: ERS2
gene_biotype: protein_coding
description:
  Probable ethylene response sensor 2; Ethylene receptor related to bacterial two-component regulators. Acts as negative regulator of ethylene signaling. May play a role in the regulation of flowering by upregulating GI (GIGANTEA) and RCN1 and regulate starch accumulation by down-regulating the alpha- amylase AMY3D.


ensembl_gene_id: Q0DKN3
symbol: VLN1
gene_biotype: protein_coding
description:
  Villin-1; Ca(2+)-independent actin-binding protein. Binds actin microfilaments (MFs). Involved in actin filament bundling, severing and capping. Caps the barbed end of actin filaments and protects them from disassembly. Promotes VLN3-mediated MF severing.


ensembl_gene_id: Q0DKW8
symbol: LTI6B
gene_biotype: protein_coding
description:
  Hydrophobic protein LTI6B; Plays a role in the regulation of membrane potential. Could mediate a proton leak (By similarity); Belongs to the UPF0057 (PMP3) family.


ensembl_gene_id: Q0DKY4
symbol: SAM1
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthase 1; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The reaction comprises two steps that are both catalyzed by the same enzyme: formation of S-adenosylmethionine (AdoMet) and triphosphate, and subsequent hydrolysis of the triphosphate.


ensembl_gene_id: Q0DLA3
symbol: ADF7
gene_biotype: protein_coding
description:
  Actin-depolymerizing factor 7; Actin-depolymerizing protein. Severs actin filaments (F- actin) and binds to actin monomers (By similarity).


ensembl_gene_id: Q0DLB9
symbol: RH17
gene_biotype: protein_coding
description:
  DEAD-box ATP-dependent RNA helicase 17; May play a role in organellar ribosome biogenesis and suppress 16S rRNA maturation.


ensembl_gene_id: Q0DLD3
symbol: TFIIAy
gene_biotype: protein_coding
description:
  Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation. TFIIA in a complex with TBP mediates transcriptional activity (By similarity). Protein involved in the resistance to X.oryzae; Belongs to the TFIIA subunit 2 family.


ensembl_gene_id: Q0DM51
symbol: RH3_ORYSJ
gene_biotype: protein_coding
description:
  DEAD-box ATP-dependent RNA helicase 3, chloroplastic; Nuclear genome-encoded factor involved in ribosome biogenesis in chloroplasts. Binds specific group II introns in chloroplasts and facilitates their splicing. Required for normal development of chloroplasts; Belongs to the DEAD box helicase family. DDX21/DDX50 subfamily.


ensembl_gene_id: Q0DN94
symbol: OSJNBa0079B15
gene_biotype: protein_coding
description:
  10 kDa prolamin; Seed storage protein; serves as a source of nitrogen, carbon and sulfur for the young developing seedling; Belongs to the prolamin family.


ensembl_gene_id: Q0DNU1
symbol: GATA19
gene_biotype: protein_coding
description:
  GATA transcription factor 19; Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.


ensembl_gene_id: Q0DR28
symbol: PUB57
gene_biotype: protein_coding
description:
  U-box domain-containing protein 57; Possesses E3 ubiquitin-protein ligase in vitro. May be involved in cell death signaling.


ensembl_gene_id: Q0DRV6
symbol: SODCC1
gene_biotype: protein_coding
description:
  Superoxide dismutase [Cu-Zn] 1; Destroys radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the Cu-Zn superoxide dismutase family.


ensembl_gene_id: Q0DS59
symbol: CYP714B2
gene_biotype: protein_coding
description:
  Cytochrome P450 714B2; Catalyzes the 13-hydroxylation of gibberellins (GAs). Determines the ratio of GA4 and GA1. Converts GA12 into GA53.


ensembl_gene_id: Q0DSH9
symbol: NAS1
gene_biotype: protein_coding
description:
  Nicotianamine synthase 1; Synthesizes nicotianamine, a polyamine that is the first intermediate in the synthesis of the phytosiderophores of the mugineic acid type found in gramineae which serve as a sensor for the physiological iron status within the plant, and/or might be involved in the transport of iron; Belongs to the nicotianamine synthase (NAS)-like family.


ensembl_gene_id: Q0DSV9
symbol: SPO11-3
gene_biotype: protein_coding
description:
  Topoisomerase 6 subunit A3; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity (By similarity).


ensembl_gene_id: Q0DUA4
symbol: Q0DUA4_ORYSJ
gene_biotype: protein_coding
description:
  Os03g0197200 protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: Q0DUI8
symbol: PDS
gene_biotype: protein_coding
description:
  15-cis-phytoene desaturase, chloroplastic/chromoplastic; Converts phytoene into zeta-carotene via the intermediary of phytofluene by the symmetrical introduction of two double bonds at the C-11 and C-11' positions of phytoene with a concomitant isomerization of two neighboring double bonds at the C9 and C9' positions from trans to cis.


ensembl_gene_id: Q0DUR2
symbol: ILI6
gene_biotype: protein_coding
description:
  Transcription factor ILI6; Atypical and probable non DNA-binding bHLH transcription factor that acts as a positive regulator of grain size. Binds the transcription repressor APG and forms a heterodimer of antagonistic bHLH transcription factors that regulates grain length and weight by controlling cell elongation in lemma and palea. May be involved in the control of lamina inclination through brassinosteroid signaling pathway.


ensembl_gene_id: Q0DV28
symbol: KINUA
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-UA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. Ungrouped subfamily.


ensembl_gene_id: Q0DVX2
symbol: OJ1384D03.13
gene_biotype: protein_coding
description:
  DEAD-box ATP-dependent RNA helicase 50; Probably involved in resistance to biotic and abiotic stresses. Confers tolerance to oxidative stress and mediates pathogenesis-related (PR) genes expression. Exhibits RNA-dependent ATPase and ATP-dependent RNA helicase activities in vitro. Belongs to the DEAD box helicase family.


ensembl_gene_id: Q0DWA9
symbol: SPPL4
gene_biotype: protein_coding
description:
  Signal peptide peptidase-like 4; Intramembrane-cleaving aspartic protease (I-CLiP) that cleaves type II membrane signal peptides in the hydrophobic plane of the membrane; Belongs to the peptidase A22B family.


ensembl_gene_id: Q0DWC7
symbol: ETR3
gene_biotype: protein_coding
description:
  Ethylene receptor 3; Ethylene receptor related to bacterial two-component regulators. Acts as negative regulator of ethylene signaling. May delay the transition from the vegetative stage to the floral stage by upregulating GI (GIGANTEA) and RCN1 and cause starch accumulation in stems by down-regulating the alpha-amylase AMY3D.


ensembl_gene_id: Q0DWF2
symbol: IAA10
gene_biotype: protein_coding
description:
  Auxin-responsive protein IAA10; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.


ensembl_gene_id: Q0DWH7
symbol: OJ1293_E04.25
gene_biotype: protein_coding
description:
  Nicotinamide/nicotinic acid mononucleotide adenylyltransferase; Catalyzes the formation of NAD(+) from nicotinamide mononucleotide (NMN) and ATP. Can also use the deamidated form; nicotinic acid mononucleotide (NaMN) as substrate. Belongs to the eukaryotic NMN adenylyltransferase family.


ensembl_gene_id: Q0DWQ1
symbol: MGD3
gene_biotype: protein_coding
description:
  Probable monogalactosyldiacylglycerol synthase 3, chloroplastic; Involved in the synthesis of the major structural component of photosynthetic membranes.


ensembl_gene_id: Q0DWT8
symbol: OJ1004_E04.4
gene_biotype: protein_coding
description:
  DEAD-box ATP-dependent RNA helicase 1; Belongs to the DEAD box helicase family. DDX51/DBP6 subfamily.


ensembl_gene_id: Q0DX67
symbol: DSP2
gene_biotype: protein_coding
description:
  Probable tyrosine-protein phosphatase DSP2; Probable tyrosine-protein phosphatase that acts as negative regulator of defense responses against the fungal pathogen Magnaporthe oryzae.


ensembl_gene_id: Q0DXR0
symbol: Q0DXR0_ORYSJ
gene_biotype: protein_coding
description:
  Os02g0738900 protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.


ensembl_gene_id: Q0DXS3
symbol: RDR1
gene_biotype: protein_coding
description:
  Probable RNA-dependent RNA polymerase 1; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs); Belongs to the RdRP family.


ensembl_gene_id: Q0DXZ1
symbol: CSLE2
gene_biotype: protein_coding
description:
  Cellulose synthase-like protein E2; Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase-like E subfamily.


ensembl_gene_id: Q0DY59
symbol: HMG1
gene_biotype: protein_coding
description:
  3-hydroxy-3-methylglutaryl-coenzyme A reductase 1; Catalyzes the synthesis of mevalonate. The specific precursor of all isoprenoid compounds present in plants; Belongs to the HMG-CoA reductase family.


ensembl_gene_id: Q0DYE1
symbol: Q0DYE1_ORYSJ
gene_biotype: protein_coding
description:
  DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.


ensembl_gene_id: Q0DYK7
symbol: CPK5
gene_biotype: protein_coding
description:
  Calcium-dependent protein kinase 5; May play a role in signal transduction pathways that involve calcium as a second messenger; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.


ensembl_gene_id: Q0DZ85
symbol: EXPB16
gene_biotype: protein_coding
description:
  Expansin-B16; May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity); Belongs to the expansin family. Expansin B subfamily.


ensembl_gene_id: Q0DZD2
symbol: Q0DZD2_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J013157D09, full insert sequence; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q0DZF3
symbol: G1L3
gene_biotype: protein_coding
description:
  Protein G1-like3; Probable transcription regulator that acts as a developmental regulator by promoting cell growth in response to light; Belongs to the plant homeotic and developmental regulators ALOG protein family.


ensembl_gene_id: Q0DZX1
symbol: Q0DZX1_ORYSJ
gene_biotype: protein_coding
description:
  Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.


ensembl_gene_id: Q0E070
symbol: Q0E070_ORYSJ
gene_biotype: protein_coding
description:
  Os02g0574000 protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: Q0E079
symbol: RIBA2
gene_biotype: protein_coding
description:
  Probable bifunctional riboflavin biosynthesis protein RIBA 2, chloroplastic; Involved in riboflavin biosynthesis. Catalyzes both the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2- butanone 4-phosphate and the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate (By similarity); In the N-terminal section; belongs to the DHBP synthase family.


ensembl_gene_id: Q0E088
symbol: KSL7
gene_biotype: protein_coding
description:
  Ent-cassa-12,15-diene synthase; Involved in phytocassane phytoalexins biosynthesis. Catalyzes the conversion of ent-copalyl diphosphate to the phytoalexin precursor ent-cassa-12,15-diene; Belongs to the terpene synthase family.


ensembl_gene_id: Q0E0A6
symbol: HOX7
gene_biotype: protein_coding
description:
  Homeobox-leucine zipper protein HOX7; Probable transcription factor that binds to the DNA sequence 5'-CAAT[GC]ATTG-3'; Belongs to the HD-ZIP homeobox family. Class II subfamily.


ensembl_gene_id: Q0E0C6
symbol: OPR8
gene_biotype: protein_coding
description:
  Putative 12-oxophytodienoate reductase 8; Putative oxophytodienoate reductase that may be involved in the biosynthesis or metabolism of oxylipin signaling molecules. Belongs to the NADH:flavin oxidoreductase/NADH oxidase family.


ensembl_gene_id: Q0E0D3
symbol: Q0E0D3_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J013002N01, full insert sequence; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Q0E0I1
symbol: PDIL5-3
gene_biotype: protein_coding
description:
  Protein disulfide isomerase-like 5-3; Acts as a protein-folding catalyst that interacts with nascent polypeptides to catalyze the formation, isomerization, and reduction or oxidation of disulfide bonds. May play a role in storage protein biogenesis (By similarity).


ensembl_gene_id: Q0E0P0
symbol: CIN1
gene_biotype: protein_coding
description:
  Beta-fructofuranosidase, insoluble isoenzyme 1; May play a role in sucrose partitioning during seed development and in stress response; Belongs to the glycosyl hydrolase 32 family.


ensembl_gene_id: Q0E0Q3
symbol: PARP3
gene_biotype: protein_coding
description:
  Protein ADP-ribosyltransferase PARP3; Involved in the base excision repair (BER) pathway, by catalyzing the poly(ADP-ribosyl)ation of a limited number of acceptor proteins involved in chromatin architecture and in DNA metabolism. This modification follows DNA damages and appears as an obligatory step in a detection/signaling pathway leading to the reparation of DNA strand breaks (By similarity).


ensembl_gene_id: Q0E2L3
symbol: KIN14D
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-14D; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-14 subfamily.


ensembl_gene_id: Q0E2P1
symbol: OsJ_005772
gene_biotype: protein_coding
description:
  Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform; The B regulatory subunit may modulate substrate selectivity and catalytic activity, and also may direct the localization of the catalytic enzyme to a particular subcellular compartment.


ensembl_gene_id: Q0E2Q3
symbol: B1131G07.20
gene_biotype: protein_coding
description:
  Putative eukaryotic initiation factor 4A-2; ATP-dependent RNA helicase which is a subunit of the eIF4F complex involved in cap recognition and is required for mRNA binding to ribosome. In the current model of translation initiation, eIF4A unwinds RNA secondary structures in the 5'-UTR of mRNAs which is necessary to allow efficient binding of the small ribosomal subunit, and subsequent scanning for the initiator codon (By similarity).


ensembl_gene_id: Q0E2Y1
symbol: UVR3
gene_biotype: protein_coding
description:
  (6-4)DNA photolyase; Involved in repair of UV radiation-induced DNA damage. Catalyzes the photoreactivation of pyrimidine [6-4] pyrimidone photoproduct (6-4 products) (By similarity).


ensembl_gene_id: Q0E3C8
symbol: CLPB3
gene_biotype: protein_coding
description:
  Chaperone protein ClpB3, mitochondrial; Molecular chaperone that may not be involved in heat stress response or tolerance.


ensembl_gene_id: Q0E3F8
symbol: SPL5
gene_biotype: protein_coding
description:
  Squamosa promoter-binding-like protein 5; Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'.


ensembl_gene_id: Q0E3I9
symbol: URED
gene_biotype: protein_coding
description:
  Urease accessory protein D; Required for the maturation and activation of urease via the functional incorporation of the urease nickel metallocenter. Belongs to the UreD family.


ensembl_gene_id: Q0E3L5
symbol: UREF
gene_biotype: protein_coding
description:
  Urease accessory protein F; Required for the maturation and activation of urease via the functional incorporation of the urease nickel metallocenter. Belongs to the UreF family.


ensembl_gene_id: Q0E3M2
symbol: G1L1
gene_biotype: protein_coding
description:
  Protein G1-like1; Probable transcription regulator that acts as a developmental regulator by promoting cell growth in response to light; Belongs to the plant homeotic and developmental regulators ALOG protein family.


ensembl_gene_id: Q0E3U9
symbol: Q0E3U9_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J013168E03, full insert sequence; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q0E3V2
symbol: YL1
gene_biotype: protein_coding
description:
  Protein YELLOW LEAF 1, choloroplastic; Required for photosynthetic protein complex assembly in chloroplast thylakoid membranes during leaf development. Maintains the abundance of the core protein complex PsaA-PsaB of photosystem I (PSI) in the thylakoid membrane. May play a role in the efficient biogenesis of the chloroplast ATP synthase complex, possibly by interacting with the beta subunit atpB.


ensembl_gene_id: Q0E459
symbol: MPK13
gene_biotype: protein_coding
description:
  Mitogen-activated protein kinase 13; Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MAP kinase subfamily.


ensembl_gene_id: Q0E463
symbol: Q0E463_ORYSJ
gene_biotype: protein_coding
description:
  Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family.


ensembl_gene_id: Q0E4H0
symbol: Q0E4H0_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J013091G02, full insert sequence; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: Q0E4J6
symbol: YSL8
gene_biotype: protein_coding
description:
  Probable metal-nicotianamine transporter YSL8; May be involved in the transport of nicotianamine-chelated metals.


ensembl_gene_id: Q0E4K1
symbol: CATA
gene_biotype: protein_coding
description:
  Catalase isozyme A; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide (By similarity). Involved in environmental stress response. Promotes drought stress tolerance and recovery.


ensembl_gene_id: Q0ILJ3
symbol: SUT2
gene_biotype: protein_coding
description:
  Sucrose transport protein SUT2; Responsible for the transport of sucrose into the cell, with the concomitant uptake of protons (symport system). May also transport other glucosides (By similarity); Belongs to the glycoside-pentoside-hexuronide (GPH) cation symporter transporter (TC 2.A.2.4) family.


ensembl_gene_id: Q0ILQ6
symbol: RAB5A
gene_biotype: protein_coding
description:
  Ras-related protein Rab5A; Plays an important role in intracellular trafficking of seed storage proteins to the protein storage vacuoles (PSVs). Participates in the transport of the proglutelins from the Golgi apparatus to the PSVs in endosperm. Functions cooperatively with VPS9A to regulate post-Golgi dense vesicle-mediated transport of storage proteins to the type II protein bodies (PBII) protein storage vacuoles in developing endosperm. Involved in the maintenance of the general structural organization of the endomembrane system in developing endosperm. Binds GTP in vitro.


ensembl_gene_id: Q0ILZ4
symbol: RH9_ORYSJ
gene_biotype: protein_coding
description:
  DEAD-box ATP-dependent RNA helicase 9; Belongs to the DEAD box helicase family. DDX21/DDX50 subfamily.


ensembl_gene_id: Q0IMG5
symbol: MT4A
gene_biotype: protein_coding
description:
  Metallothionein-like protein 4A; Metallothioneins have a high content of cysteine residues that bind various heavy metals.


ensembl_gene_id: Q0IMG9
symbol: SPL11
gene_biotype: protein_coding
description:
  E3 ubiquitin-protein ligase SPL11; E3 ubiquitin-protein ligase that negatively regulates programmed cell death and disease resistance. Participates in flowering time control by mediating ubiquitination and subsequent proteasomal degradation of SPIN1.


ensembl_gene_id: Q0IMM9
symbol: Q0IMM9_ORYSJ
gene_biotype: protein_coding
description:
  Os12g0560400 protein; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.


ensembl_gene_id: Q0IMS9
symbol: KIN14Q
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-14Q; Minus end-directed motor protein that transports actin filaments along microtubules. Plays a central role in the polar orientation of actin filaments along microtubules, and thus a contribution to the organization of the cytoskeletal architecture. Links the actin microfilaments with the cortical microtubules in both cycling and non-cycling cells. Required for efficient cell elongation by its participation in the premitotic nuclear positioning.


ensembl_gene_id: Q0IMV4
symbol: GRXC14
gene_biotype: protein_coding
description:
  Putative glutaredoxin-C14; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins (By similarity); Belongs to the glutaredoxin family. CC-type subfamily.


ensembl_gene_id: Q0INC5
symbol: OsJ_36091
gene_biotype: protein_coding
description:
  DEAD-box ATP-dependent RNA helicase 28; Belongs to the DEAD box helicase family. DDX27/DRS1 subfamily.


ensembl_gene_id: Q0ING3
symbol: SHT2_ORYSJ
gene_biotype: protein_coding
description:
  Spermidine hydroxycinnamoyltransferase 2; Hydroxycinnamoyl transferase that catalyzes the transfer of an acyl from p-coumaryol-CoA to spermidine, to produce coumaroyl spermidine. Can use feruloyl-CoA as acyl donor. Contributes to the natural variation of spermidine-based phenolamides in rice cultivars.


ensembl_gene_id: Q0INR6
symbol: Q0INR6_ORYSJ
gene_biotype: protein_coding
description:
  Glycosyl hydrolase family protein 43, putative, expressed; Belongs to the glycosyl hydrolase 43 family.


ensembl_gene_id: Q0INW1
symbol: UFSP_ORYSJ
gene_biotype: protein_coding
description:
  Probable Ufm1-specific protease; Thiol protease which recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ufm-1, a ubiquitin-like modifier protein bound to a number of target proteins.


ensembl_gene_id: Q0INY7
symbol: RBCS
gene_biotype: protein_coding
description:
  Ribulose bisphosphate carboxylase small chain, chloroplastic; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (By similarity); Belongs to the RuBisCO small chain family.


ensembl_gene_id: Q0INZ4
symbol: SPS3
gene_biotype: protein_coding
description:
  Probable solanesyl-diphosphate synthase 3, chloroplastic; Involved in providing solanesyl diphosphate for plastoquinone-9 (PQ-9) formation.


ensembl_gene_id: Q0IP28
symbol: LAC25
gene_biotype: protein_coding
description:
  Laccase-25; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family.


ensembl_gene_id: Q0IP69
symbol: NOMT_ORYSJ
gene_biotype: protein_coding
description:
  Naringenin 7-O-methyltransferase; S-adenosyl-L-methionine-dependent methyltransferase involved in the biosynthesis of the sakuranetin, an inducible defense mechanism of O.sativa against pathogen attack; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. COMT subfamily.


ensembl_gene_id: Q0IPT8
symbol: Q0IPT8_ORYSJ
gene_biotype: protein_coding
description:
  V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.


ensembl_gene_id: Q0IQK9
symbol: LTP
gene_biotype: protein_coding
description:
  Non-specific lipid-transfer protein 1; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.


ensembl_gene_id: Q0IQN5
symbol: RAPTOR2
gene_biotype: protein_coding
description:
  Regulatory-associated protein of TOR 2; Component of TORC1 complex, which is an essential cell growth regulator that controls plant development. Acts by recruiting substrates for TOR. Acts by activating transcription, protein synthesis and ribosome biogenesis, and inhibiting mRNA degradation and autophagy. Belongs to the WD repeat RAPTOR family.


ensembl_gene_id: Q0IQU1
symbol: LAC22
gene_biotype: protein_coding
description:
  Laccase-22; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family.


ensembl_gene_id: Q0IRB0
symbol: GRXC13
gene_biotype: protein_coding
description:
  Glutaredoxin-C13; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins (By similarity); Belongs to the glutaredoxin family. CC-type subfamily.


ensembl_gene_id: Q0ITU1
symbol: IDI2
gene_biotype: protein_coding
description:
  Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: Q0IU69
symbol: Q0IU69_ORYSJ
gene_biotype: protein_coding
description:
  Oxidoreductase, short chain dehydrogenase/reductase family protein, expressed; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Q0IUB5
symbol: VATP-P1
gene_biotype: protein_coding
description:
  V-type proton ATPase 16 kDa proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.


ensembl_gene_id: Q0IUE3
symbol: Q0IUE3_ORYSJ
gene_biotype: protein_coding
description:
  Cytochrome b-c1 complex subunit 6; This is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain. This protein may mediate formation of the complex between cytochromes c and c1. Belongs to the UQCRH/QCR6 family.


ensembl_gene_id: Q0IWF3
symbol: NIP3-1
gene_biotype: protein_coding
description:
  Aquaporin NIP3-1; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes; Belongs to the MIP/aquaporin (TC 1.A.8) family. NIP (TC 1.A.8.12) subfamily.


ensembl_gene_id: Q0IWL9
symbol: GRXS11
gene_biotype: protein_coding
description:
  Monothiol glutaredoxin-S11; May only reduce GSH-thiol disulfides, but not protein disulfides; Belongs to the glutaredoxin family. CGFS subfamily.


ensembl_gene_id: Q0IWM5
symbol: NDX1
gene_biotype: protein_coding
description:
  Protein NEOXANTHIN-DEFICIENT 1; Required for neoxanthin biosynthesis. Probably not involved directly in the enzymatic conversion of violaxanthin to neoxanthin. Is necessary but not sufficient for neoxanthin synthesis.


ensembl_gene_id: Q0IXP9
symbol: OsJ_31520
gene_biotype: protein_coding
description:
  Acylamino-acid-releasing enzyme 1; Catalyzes the hydrolysis of the N-terminal peptide bond of an N-acetylated peptide to generate an N-acetylated amino acid and a peptide with a free N-terminus; Belongs to the peptidase S9C family.


ensembl_gene_id: Q0IY07
symbol: ORC3
gene_biotype: protein_coding
description:
  Origin of replication complex subunit 3; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent. The specific DNA sequences that define origins of replication have not been identified yet.


ensembl_gene_id: Q0IYP2
symbol: Q0IYP2_ORYSJ
gene_biotype: protein_coding
description:
  V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.


ensembl_gene_id: Q0IZG6
symbol: Q0IZG6_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:006-310-E10, full insert sequence; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Q0IZQ2
symbol: OsJ_30298
gene_biotype: protein_coding
description:
  Cysteine--tRNA ligase CPS1 homolog, chloroplastic/mitochondrial; Nuclear genome-encoded factor required for normal assembly of chloroplast polysomes; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: Q0IZQ3
symbol: PHT4;5
gene_biotype: protein_coding
description:
  Probable anion transporter 5, chloroplastic; Probable anion transporter; Belongs to the major facilitator superfamily. Sodium/anion cotransporter (TC 2.A.1.14) family.


ensembl_gene_id: Q0IZS0
symbol: OsJ_30273
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide pyrophosphorylase [carboxylating], chloroplastic; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family.


ensembl_gene_id: Q0J006
symbol: PAD1
gene_biotype: protein_coding
description:
  Proteasome subunit alpha type-7-B; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity; Belongs to the peptidase T1A family.


ensembl_gene_id: Q0J032
symbol: OJ1112_E07.9
gene_biotype: protein_coding
description:
  Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import.


ensembl_gene_id: Q0J035
symbol: OJ1112_E07.4
gene_biotype: protein_coding
description:
  4'-phosphopantetheine phosphatase; Catalyzes the phosphorylation of pantothenate the first step in CoA biosynthesis. May play a role in the physiological regulation of the intracellular CoA concentration. Functionally redudant with PANK1 (By similarity). The phosphatase activity shows preference for normal or oxidatively damaged intermediates of 4'-phosphopantetheine, which provides strong indirect evidence that the phosphatase activity pre- empts damage in the CoA pathway (By similarity). Hydrolyzing excess 4'- phosphopantetheine could constitute a directed overflow mechanism to preve [...]


ensembl_gene_id: Q0J064
symbol: MED10
gene_biotype: protein_coding
description:
  Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.


ensembl_gene_id: Q0J090
symbol: DREB1H
gene_biotype: protein_coding
description:
  Dehydration-responsive element-binding protein 1H; Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription (By similarity). Belongs to the AP2/ERF transcription factor family. ERF subfamily.


ensembl_gene_id: Q0J0A4
symbol: P0669G04.7
gene_biotype: protein_coding
description:
  Probable 1-acylglycerol-3-phosphate O-acyltransferase; Lysophosphatidic acid acyltransferase which functions in phosphatidic acid biosynthesis. May regulate neutral lipid accumulation and participate in the regulation of lipid turnover in vegetative cells. May possess additional triacylglycerol lipase and phospholipase A2 activities in vitro (By similarity); Belongs to the peptidase S33 family. ABHD4/ABHD5 subfamily.


ensembl_gene_id: Q0J0B2
symbol: ITPK6
gene_biotype: protein_coding
description:
  Inositol-tetrakisphosphate 1-kinase 6; Kinase that can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4 or Ins(1,3,4)P3 and participates in phytic acid biosynthesis in developing seeds. Phytic acid is the primary storage form of phosphorus in cereal grains and other plant seeds. Belongs to the ITPK1 family.


ensembl_gene_id: Q0J0H4
symbol: OsJ_29962
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E1 component subunit beta-2, mitochondrial; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3) (By similarity).


ensembl_gene_id: Q0J0K1
symbol: SPL18
gene_biotype: protein_coding
description:
  Squamosa promoter-binding-like protein 18; Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May be involved in panicle development.


ensembl_gene_id: Q0J0S6
symbol: TOP3B
gene_biotype: protein_coding
description:
  DNA topoisomerase 3-beta; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)- enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand than undergoes passage around the unbroken strand thus removing DNA supercoils. [...]


ensembl_gene_id: Q0J185
symbol: CYP707A7
gene_biotype: protein_coding
description:
  Abscisic acid 8'-hydroxylase 3; Involved in the oxidative degradation of abscisic acid. Belongs to the cytochrome P450 family.


ensembl_gene_id: Q0J1S6
symbol: PFK
gene_biotype: protein_coding
description:
  ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: Q0J235
symbol: RL9
gene_biotype: protein_coding
description:
  Probable transcription factor RL9; Probable transcription factor that regulates abaxial identity during leaf development. Modulates leaf rolling by regulating the programmed cell death (PCD) of abaxial mesophyll and sclerenchyma cells during leaf development.


ensembl_gene_id: Q0J290
symbol: PAO7
gene_biotype: protein_coding
description:
  Polyamine oxidase 7; Flavoenzyme involved in polyamine back-conversion. Catalyzes the oxidation of the secondary amino group of polyamines, such as spermine, spermidine and their acetyl derivatives. Substrate preference is spermine > spermidine > N(1)-acetylspermine > N(1)-acetylspermidine > norspermine > thermospermine. No activity detected when putrescine is used as substrate. May play a role in producing hydrogen peroxide for secondary wall thickening through lignin formation during anther development (Probable).


ensembl_gene_id: Q0J2C6
symbol: PRMT1
gene_biotype: protein_coding
description:
  Probable protein arginine N-methyltransferase 1; Methylates (mono and asymmetric dimethylation) the guanidino nitrogens of arginyl residues present in a glycine and arginine-rich domain (can methylate histones); Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.


ensembl_gene_id: Q0J2X1
symbol: OsNHX5
gene_biotype: protein_coding
description:
  Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.


ensembl_gene_id: Q0J349
symbol: SWEET7B
gene_biotype: protein_coding
description:
  Bidirectional sugar transporter SWEET7b; Mediates both low-affinity uptake and efflux of sugar across the plasma membrane.


ensembl_gene_id: Q0J360
symbol: CIN7
gene_biotype: protein_coding
description:
  Beta-fructofuranosidase, insoluble isoenzyme 7; May play a role in sucrose partitioning during seed development.


ensembl_gene_id: Q0J361
symbol: SWEET7A
gene_biotype: protein_coding
description:
  Bidirectional sugar transporter SWEET7a; Mediates both low-affinity uptake and efflux of sugar across the plasma membrane.


ensembl_gene_id: Q0J3D9
symbol: OsJ_027299
gene_biotype: protein_coding
description:
  Coatomer subunit alpha-3; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity).


ensembl_gene_id: Q0J3L4
symbol: GRXS10
gene_biotype: protein_coding
description:
  Monothiol glutaredoxin-S10; May only reduce GSH-thiol disulfides, but not protein disulfides; Belongs to the glutaredoxin family. CPYC subfamily.


ensembl_gene_id: Q0J3Y6
symbol: DREB1I
gene_biotype: protein_coding
description:
  Dehydration-responsive element-binding protein 1I; Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription (By similarity). Belongs to the AP2/ERF transcription factor family. ERF subfamily.


ensembl_gene_id: Q0J3Y7
symbol: DREB1J
gene_biotype: protein_coding
description:
  Dehydration-responsive element-binding protein 1J; Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription (By similarity). Belongs to the AP2/ERF transcription factor family. ERF subfamily.


ensembl_gene_id: Q0J466
symbol: MADS7
gene_biotype: protein_coding
description:
  MADS-box transcription factor 7; Probable transcription factor. May be involved in the control of flowering time.


ensembl_gene_id: Q0J4I1
symbol: CDKB2-1
gene_biotype: protein_coding
description:
  Cyclin-dependent kinase B2-1; Forms a complex with CYCB2-1 or CYCB2-2 that activates CDK kinase in tobacco BY2 cells during G2/M (mitosis) phases. May be involved in the regulation of the cell cycle at the G2/M transition.


ensembl_gene_id: Q0J4P2
symbol: HSP81-1
gene_biotype: protein_coding
description:
  Heat shock protein 81-1; Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co- chaperones that modulate its substrate recognition, ATPase cycle and chaperone function (By similarity); Belongs to the heat shock protein 90 family.


ensembl_gene_id: Q0J5F8
symbol: MIF4
gene_biotype: protein_coding
description:
  Mini zinc finger protein 4; Inhibits zinc finger homeodomain (ZHD) transcription factors, by interacting with them to prevent both their nuclear localization and their DNA-binding properties.


ensembl_gene_id: Q0J5L5
symbol: Q0J5L5_ORYSJ
gene_biotype: protein_coding
description:
  Os08g0425100 protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.


ensembl_gene_id: Q0J649
symbol: COPD4_ORYSJ
gene_biotype: protein_coding
description:
  Coatomer subunit delta-4; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity).


ensembl_gene_id: Q0J6H8
symbol: CYL3
gene_biotype: protein_coding
description:
  Cyclase-like protein 3; May be involved in response to stresses. Belongs to the Cyclase 1 superfamily.


ensembl_gene_id: Q0J6N4
symbol: OSH45
gene_biotype: protein_coding
description:
  Homeobox protein knotted-1-like 13; Isoform 3 acts as transcription activator, but isoforms 1 and 2 do not; Belongs to the TALE/KNOX homeobox family.


ensembl_gene_id: Q0J6P7
symbol: B1114E07.12
gene_biotype: protein_coding
description:
  Probable adenylate kinase 5, chloroplastic; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism.


ensembl_gene_id: Q0J6T3
symbol: CAD5
gene_biotype: protein_coding
description:
  Probable cinnamyl alcohol dehydrogenase 5; Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers. Catalyzes the NADPH- dependent reduction of coniferaldehyde, 5-hydroxyconiferaldehyde, sinapaldehyde, 4-coumaraldehyde and caffeyl aldehyde to their respective alcohols.


ensembl_gene_id: Q0J6Z4
symbol: Q0J6Z4_ORYSJ
gene_biotype: protein_coding
description:
  Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.


ensembl_gene_id: Q0J716
symbol: VLN5
gene_biotype: protein_coding
description:
  Villin-5; Ca(2+)-regulated actin-binding protein (By similarity). Binds actin microfilaments (MFs). Involved in actin filament bundling, severing and capping. Caps the barbed end of actin filaments and is able to sever them in a calcium-dependent manner (By similarity). Belongs to the villin/gelsolin family.


ensembl_gene_id: Q0J7E4
symbol: STAD6_ORYSJ
gene_biotype: protein_coding
description:
  Acyl-[acyl-carrier-protein] desaturase 6, chloroplastic; Introduces a cis double bond in the acyl chain of an acyl- [acyl-carrier protein].


ensembl_gene_id: Q0J7J7
symbol: P0020B10.28
gene_biotype: protein_coding
description:
  CRS2-associated factor 2, mitochondrial; May be involved in the splicing of group IIB introns in mitochondria.


ensembl_gene_id: Q0J7N5
symbol: OJ1134_B10.16
gene_biotype: protein_coding
description:
  Phosphopantothenate--cysteine ligase 2; Catalyzes the first step in the biosynthesis of coenzyme A from vitamin B5, where cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine; Belongs to the PPC synthetase family.


ensembl_gene_id: Q0J7P4
symbol: HD5
gene_biotype: protein_coding
description:
  Nuclear transcription factor Y subunit B-11; Probable transcription factor involved in the regulation of flowering time under long day (LD) conditions. Functions as repressor of flowering, independently of HD1 and GHD7. Controls flowering time by negatively regulating the expression of EHD1 and HD3A. Regulates plant height by promoting cell elongation in the internodes. Component of the NF-Y/HAP transcription factor complex (By similarity); Belongs to the NFYB/HAP3 subunit family.


ensembl_gene_id: Q0J7T6
symbol: SIGA
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor sigA; Sigma factors are initiation factors that promote the attachment of plastid-encoded RNA polymerase (PEP) to specific initiation sites and are then released (Probable). Controls the transcription of the psaA and psaB genes in chloroplast, and thus maintains the abundance of the core protein complex PsaA-PsaB of photosystem I (PSI) in the thylakoid membrane. Maintains PSI activity, sufficient rate of electron transfer from PSII to PSI, and photochemical efficiency.


ensembl_gene_id: Q0J7U6
symbol: TPR2
gene_biotype: protein_coding
description:
  Protein TOPLESS-RELATED PROTEIN 2; Transcriptional corepressor involved in branch formation regulation, presumably by suppressing primary branch formation and promoting secondary branch formation (Ref.7,. Required for the cell elongation in the first internode and pollen development. Probable downstream regulator of strigolactones signaling important in axillary meristem maintenance. Acts in auxin signaling and is associated with the regulation of histone deacetylation. Essential for the function of miR172 microRNA and its target genes in regulating panicle development.


ensembl_gene_id: Q0J7V9
symbol: LSD1
gene_biotype: protein_coding
description:
  Protein LSD1; Negative regulator of programmed cell death and hypersensitive response (HR). Positive regulator of callus differentiation.


ensembl_gene_id: Q0J7Y8
symbol: RH45_ORYSJ
gene_biotype: protein_coding
description:
  DEAD-box ATP-dependent RNA helicase 45; Belongs to the DEAD box helicase family. DDX46/PRP5 subfamily.


ensembl_gene_id: Q0J803
symbol: Q0J803_ORYSJ
gene_biotype: protein_coding
description:
  Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.


ensembl_gene_id: Q0J8A4
symbol: GAPC1
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase 1, cytosolic; Key enzyme in glycolysis that catalyzes the first step of the pathway by converting D-glyceraldehyde 3-phosphate (G3P) into 3- phospho-D-glyceroyl phosphate. Essential for the maintenance of cellular ATP levels and carbohydrate metabolism (By similarity).


ensembl_gene_id: Q0J8G4
symbol: FRK2
gene_biotype: protein_coding
description:
  Fructokinase-2; May play an important role in maintaining the flux of carbon towards starch formation in endosperm. May also be involved in a sugar- sensing pathway; Belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: Q0J8J8
symbol: PMEI28
gene_biotype: protein_coding
description:
  Pectinesterase inhibitor 28; Pectin methylesterase (PME) inhibitor that inhibits PME in vitro. Functions as a critical structural modulator by regulating the degree of pectin methylesterification and the physiochemical properties of the cell wall components.


ensembl_gene_id: Q0J8M2
symbol: ADI1
gene_biotype: protein_coding
description:
  Ferredoxin-1, chloroplastic; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: Q0J8Q3
symbol: OsJ_16753
gene_biotype: protein_coding
description:
  Protein STAY-GREEN LIKE, chloroplastic; Promotes chlorophyll degradation in leaves. May be involved in LHCI proteins degradation, regulating the balance between LHCI and LHCII; Belongs to the staygreen family.


ensembl_gene_id: Q0J8R9
symbol: PSBS2
gene_biotype: protein_coding
description:
  Photosystem II 22 kDa protein 2, chloroplastic; Involved in high light-mediated energy-dependent nonphotochemical quenching (NPQ, qE) and thermal dissipation (TD) thus regulating energy conversion in photosystem II and protecting from photoinhibition. Seems also to regulate quantum yield of electron transport in fluctuating light conditions ; Belongs to the ELIP/psbS family.


ensembl_gene_id: Q0J932
symbol: YSL10
gene_biotype: protein_coding
description:
  Probable metal-nicotianamine transporter YSL10; May be involved in the transport of nicotianamine-chelated metals; Belongs to the YSL (TC 2.A.67.2) family.


ensembl_gene_id: Q0J951
symbol: ARF12
gene_biotype: protein_coding
description:
  Auxin response factor 12; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).


ensembl_gene_id: Q0J954
symbol: PAO5
gene_biotype: protein_coding
description:
  Polyamine oxidase 5; Flavoenzyme involved in polyamine back-conversion. Catalyzes the oxidation of the secondary amino group of polyamines, such as spermine. Substrate preference is spermine > thermospermine > norspermine. No activity detected when putrescine, spermidine or N(1)-acetylspermidine are used as substrates. Plays an important role in the regulation of polyamine intracellular concentration (Probable). May play a role in producing hydrogen peroxide during seed germination (Probable).


ensembl_gene_id: Q0J998
symbol: IAMT1
gene_biotype: protein_coding
description:
  Indole-3-acetate O-methyltransferase 1; Catalyzes the methylation of the free carboxyl end of the plant hormone indole-3-acetic acid (IAA). Converts IAA to IAA methyl ester (MeIAA). Regulates IAA activities by IAA methylation. Methylation of IAA plays an important role in regulating plant development and auxin homeostasis. MeIAA seems to be an inactive form of IAA. Belongs to the methyltransferase superfamily. SABATH family.


ensembl_gene_id: Q0J9G7
symbol: Q0J9G7_ORYSJ
gene_biotype: protein_coding
description:
  Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.


ensembl_gene_id: Q0J9J6
symbol: EME1
gene_biotype: protein_coding
description:
  Crossover junction endonuclease EME1; Interacts with MUS81 to form a DNA structure-specific endonuclease with substrate preference for branched DNA structures with a 5'-end at the branch nick. Typical substrates include 3'-flap structures, D-loops, replication forks, nicked Holliday junctions and also intact Holliday junctions with a reduced efficiency. May be required in mitosis for the processing of stalled or collapsed replication fork intermediates. Plays a role in DNA repair and in genotoxic stress-induced homologous recombination (HR) in somatic cells. Mediates a subset of meioti [...]


ensembl_gene_id: Q0J9V2
symbol: Q0J9V2_ORYSJ
gene_biotype: protein_coding
description:
  Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.


ensembl_gene_id: Q0J9V3
symbol: KIN14H
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-14H; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-14 subfamily.


ensembl_gene_id: Q0J9X2
symbol: ROC2
gene_biotype: protein_coding
description:
  Homeobox-leucine zipper protein ROC2; Probable transcription factor; Belongs to the HD-ZIP homeobox family. Class IV subfamily.


ensembl_gene_id: Q0JA29
symbol: FLS2
gene_biotype: protein_coding
description:
  LRR receptor-like serine/threonine-protein kinase FLS2; Constitutes the pattern-recognition receptor (PPR) that determines the specific perception of flagellin (flg22), a potent elicitor of the defense response to pathogen-associated molecular patterns (PAMPs). Recognizes flg22 from Pseudomonas aeruginosa and Acidovorax avenae. flg22 is a peptide derived from the bacterial flagellin N-terminus sequence. Does not recognize flg22 from Xanthomonas oryzae pv. oryzae (Xoo) or Xanthomonas oryzae pv. oryzicola (Xoc). Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q0JA73
symbol: Q0JA73_ORYSJ
gene_biotype: protein_coding
description:
  Vacuolar ATPase assembly integral membrane protein VMA21 homolog; Required for the assembly of the V0 complex of the vacuolar ATPase (V-ATPase) in the endoplasmic reticulum; Belongs to the VMA21 family.


ensembl_gene_id: Q0JA75
symbol: CAD7
gene_biotype: protein_coding
description:
  Cinnamyl alcohol dehydrogenase 7; Involved in lignin biosynthesis. May catalyze the final step specific for the production of lignin monomers, like coniferyl alcohol, sinapyl alcohol and 4-coumaryl alcohol.


ensembl_gene_id: Q0JA82
symbol: KS1
gene_biotype: protein_coding
description:
  Ent-kaur-16-ene synthase, chloroplastic; Catalyzes the conversion of ent-copalyl diphosphate to the gibberellin precursor ent-kaur-16-ene; Belongs to the terpene synthase family.


ensembl_gene_id: Q0JAD9
symbol: VLN4
gene_biotype: protein_coding
description:
  Villin-4; Ca(2+)-regulated actin-binding protein (By similarity). Binds actin microfilaments (MFs). Involved in actin filament bundling, severing and capping. Caps the barbed end of actin filaments and is able to sever them in a calcium-dependent manner (By similarity). Belongs to the villin/gelsolin family.


ensembl_gene_id: Q0JAI1
symbol: FL
gene_biotype: protein_coding
description:
  Probable transcription factor FL; Probable transcription factor (By similarity). Together with APO1, involved in the temporal regulation of meristem size and identity during both vegetative and reproductive developments through interaction with APO1. Promotes flowering ; Belongs to the FLO/LFY family.


ensembl_gene_id: Q0JAI9
symbol: SCAMP6
gene_biotype: protein_coding
description:
  Secretory carrier-associated membrane protein 6; Probably involved in membrane trafficking; Belongs to the SCAMP family.


ensembl_gene_id: Q0JB88
symbol: DJA6
gene_biotype: protein_coding
description:
  Chaperone protein dnaJ A6; Involved in disease resistance. Acts as negative regulator of innate immunity to the rice blast fungus (Magnaporthe oryzae). Acts as negative regulator of the pathogen-associated molecular pattern (PAMP)- triggered immunity (PTI) response through the inhibition of reactive oxygen species (ROS) accumulation and expression of defense-related genes. May function via the ubiquitin-proteasome degradation pathway.


ensembl_gene_id: Q0JBF0
symbol: YAB5
gene_biotype: protein_coding
description:
  Protein YABBY 5; May be involved in leaf cell growth and differentiation, rather than abaxial cell fate determination. Belongs to the YABBY family.


ensembl_gene_id: Q0JBH9
symbol: ERG3
gene_biotype: protein_coding
description:
  Elicitor-responsive protein 3; May play a role in plant defense signaling (Probable). Does not bind to phospholipids in a Ca(2+)-dependent manner in vitro.


ensembl_gene_id: Q0JBP5
symbol: LOGL6
gene_biotype: protein_coding
description:
  Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL6; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms (By similarity).


ensembl_gene_id: Q0JBV4
symbol: Q0JBV4_ORYSJ
gene_biotype: protein_coding
description:
  Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.


ensembl_gene_id: Q0JBY9
symbol: TRS120
gene_biotype: protein_coding
description:
  Trafficking protein particle complex II-specific subunit 120 homolog; Specific subunit of the TRAPP II complex, a highly conserved vesicle tethering complex that is required for the proper transport of proteins in post-Golgi trafficking pathways to the growing cell plate in mitotic active cells.


ensembl_gene_id: Q0JBZ6
symbol: MRS2-C
gene_biotype: protein_coding
description:
  Magnesium transporter MRS2-C; Magnesium transporter that may mediate the influx of magnesium; Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35.5) family.


ensembl_gene_id: Q0JBZ8
symbol: HCT1
gene_biotype: protein_coding
description:
  Hydroxycinnamoyltransferase 1; Hydroxycinnamoyl transferase that catalyzes the transfer of an acyl from p-coumaryol-CoA to various acyl acceptors. Can use feruloyl-CoA and caffeoyl-CoA as acyl donors. Belongs to the plant acyltransferase family.


ensembl_gene_id: Q0JCR6
symbol: Q0JCR6_ORYSJ
gene_biotype: protein_coding
description:
  Os04g0453400 protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: Q0JCR9
symbol: MST1
gene_biotype: protein_coding
description:
  Sugar transport protein MST1; Mediates active uptake of hexoses by sugar:proton symport. Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: Q0JCT1
symbol: H3
gene_biotype: protein_coding
description:
  Histone H3.3; Variant histone H3 which replaces conventional H3 in a wide range of nucleosomes in active genes. Constitutes the predominant form of histone H3 in non-dividing cells and is incorporated into chromatin independently of DNA synthesis. Deposited at sites of nucleosomal displacement throughout transcribed genes, suggesting that it represents an epigenetic imprint of transcriptionally active chromatin. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in [...]


ensembl_gene_id: Q0JCU7
symbol: ZEP
gene_biotype: protein_coding
description:
  Zeaxanthin epoxidase, chloroplastic; Zeaxanthin epoxidase that plays an important role in the xanthophyll cycle and abscisic acid (ABA) biosynthesis. Converts zeaxanthin into antheraxanthin and subsequently violaxanthin. Required for resistance to osmotic and drought stresses, seed development and dormancy.


ensembl_gene_id: Q0JCW8
symbol: LSM1
gene_biotype: protein_coding
description:
  U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.


ensembl_gene_id: Q0JCY4
symbol: Q0JCY4_ORYSJ
gene_biotype: protein_coding
description:
  Protein phosphatase methylesterase 1; Demethylates proteins that have been reversibly carboxymethylated.


ensembl_gene_id: Q0JCY9
symbol: Q0JCY9_ORYSJ
gene_biotype: protein_coding
description:
  Os04g0442800 protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.


ensembl_gene_id: Q0JCZ4
symbol: ARF9
gene_biotype: protein_coding
description:
  Auxin response factor 9; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).


ensembl_gene_id: Q0JD42
symbol: PDIL5-2
gene_biotype: protein_coding
description:
  Protein disulfide isomerase-like 5-2; Acts as a protein-folding catalyst that interacts with nascent polypeptides to catalyze the formation, isomerization, and reduction or oxidation of disulfide bonds. May play a role in storage protein biogenesis (By similarity).


ensembl_gene_id: Q0JD85
symbol: FBN5
gene_biotype: protein_coding
description:
  Fibrillin protein 5 homolog; Essential for plastoquinone-9 (PQ-9) biosynthesis through its interaction with the solanesyl diphosphate synthase SPS2. Binds to the hydrophobic solanesyl moiety, which is generated by SPS2, in FBN5-SPS homodimeric complexes to stimulates the enzyme activity of SPS2 (Probable); Belongs to the PAP/fibrillin family.


ensembl_gene_id: Q0JD86
symbol: Q0JD86_ORYSJ
gene_biotype: protein_coding
description:
  Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.


ensembl_gene_id: Q0JDC5
symbol: CIN2
gene_biotype: protein_coding
description:
  Beta-fructofuranosidase, insoluble isoenzyme 2; Cell wall-associated invertase that cleaves sucrose into glucose and fructose and is required for assimilated carbon partitioning during early grain-filling. May be involved in sucrose unloaded in the ovular and stylar vascular tissues for the stimulation of starch synthesis in the developing endosperm during grain-filling. Sugar homeostasis mediated by CIN2/GIF1 plays an important role in constitutive and induced physical and chemical defense against pathogens. Belongs to the glycosyl hydrolase 32 family.


ensembl_gene_id: Q0JDF7
symbol: Q0JDF7_ORYSJ
gene_biotype: protein_coding
description:
  Arogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine.


ensembl_gene_id: Q0JDK9
symbol: DAD1
gene_biotype: protein_coding
description:
  Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the [...]


ensembl_gene_id: Q0JDM4
symbol: GRXC5
gene_biotype: protein_coding
description:
  Glutaredoxin-C5; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins (By similarity); Belongs to the glutaredoxin family. CC-type subfamily.


ensembl_gene_id: Q0JEE2
symbol: WRKY51
gene_biotype: protein_coding
description:
  WRKY transcription factor WRKY51; Transcription factor. Interacts, when in complex with WRKY71, specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Represses specifically gibberellic acid (GA)-induced promoters in aleurone cells, probably by interfering with GAM1.


ensembl_gene_id: Q0JEG3
symbol: Q0JEG3_ORYSJ
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs; Belongs to the dus family.


ensembl_gene_id: Q0JEQ2
symbol: APX3
gene_biotype: protein_coding
description:
  Probable L-ascorbate peroxidase 3, peroxisomal; Plays a key role in hydrogen peroxide removal; Belongs to the peroxidase family. Ascorbate peroxidase subfamily.


ensembl_gene_id: Q0JEU6
symbol: LECRK3
gene_biotype: protein_coding
description:
  G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3; Involved in resistance against the herbivorous insect brown planthopper (N.lugens, BPH). Member of the BPH3 (BPH resistance locus 3) cluster which contains LECRK1, LECRK2 and LECRK3. Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q0JEZ8
symbol: KSL4
gene_biotype: protein_coding
description:
  Syn-pimara-7,15-diene synthase; Involved in momilactone phytoalexins biosynthesis. Catalyzes the conversion of syn-copalyl diphosphate to the phytoalexin precursor syn-pimara-7,15-diene; Belongs to the terpene synthase family.


ensembl_gene_id: Q0JF01
symbol: CYP99A3
gene_biotype: protein_coding
description:
  9-beta-pimara-7,15-diene oxidase; Involved in momilactone phytoalexins biosynthesis; acts as a multifunctional diterpene oxidase. Participates in the biosynthetic steps between 9-beta-pimara-7,15-diene and 3-beta-hydroxy-9-beta- pimara-7,15-dien-19,6-beta-olide. Catalyzes also consecutive oxidations at C19 of syn-stemod-13(17)-ene.


ensembl_gene_id: Q0JF02
symbol: CPS4
gene_biotype: protein_coding
description:
  Syn-copalyl diphosphate synthase; Catalyzes the conversion of geranylgeranyl diphosphate to the phytoalexin precursor syn-copalyl diphosphate.


ensembl_gene_id: Q0JF48
symbol: EMF2A
gene_biotype: protein_coding
description:
  Polycomb group protein EMF2A; Polycomb group (PcG) protein. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. They act via the methylation of histones, rendering chromatin heritably changed in its expressibility.


ensembl_gene_id: Q0JF58
symbol: AGO4B
gene_biotype: protein_coding
description:
  Protein argonaute 4B; Probably involved in the RNA silencing pathway. May bind to short RNAs such as microRNAs (miRNAs) or short interfering RNAs (siRNAs), and represses the translation of mRNAs which are complementary to them (By similarity).


ensembl_gene_id: Q0JFH5
symbol: Q0JFH5_ORYSJ
gene_biotype: protein_coding
description:
  Eukaryotic translation initiation factor 3 subunit M; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.


ensembl_gene_id: Q0JFI2
symbol: CYP93G1
gene_biotype: protein_coding
description:
  Cytochrome P450 93G1; Functions as flavone synthase II (FNSII) that catalyzes the direct conversion of flavanones to flavones. In vitro, can desaturate naringenin and eriodictyol to apigenin and luteolin, respectively. Acts as a key branch point enzyme that channels flavanones to the biosynthesis of tricin O-linked conjugates.


ensembl_gene_id: Q0JFZ0
symbol: IRO2
gene_biotype: protein_coding
description:
  Protein IRON-RELATED TRANSCRIPTION FACTOR 2; Transcription activator that binds to the DNA motif 5'- CACGTGG-3' in the promoter of iron (Fe) deficiency-inducible genes as well as of genes involved in iron homeostasis, thus contributing to basal tolerance to iron deficiency, iron uptake from soil and iron transport, particularly during seed maturation and germination. Promotes the accumulation of mugineic acid family phytosiderophores (MAs). Required for ethylene-mediated signaling during iron deficiency responses. Improves growth and yield, especially in calcareous soil with low iron a [...]


ensembl_gene_id: Q0JG89
symbol: GRXC2
gene_biotype: protein_coding
description:
  Putative glutaredoxin-C2; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins (By similarity); Belongs to the glutaredoxin family. CC-type subfamily.


ensembl_gene_id: Q0JG99
symbol: PIR7B
gene_biotype: protein_coding
description:
  Esterase PIR7B; Exhibits esterase activity towards naphthol AS-acetate in vitro; Belongs to the AB hydrolase superfamily.


ensembl_gene_id: Q0JGI1
symbol: SPL2
gene_biotype: protein_coding
description:
  Squamosa promoter-binding-like protein 2; Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May be involved in panicle development.


ensembl_gene_id: Q0JGJ6
symbol: Q0JGJ6_ORYSJ
gene_biotype: protein_coding
description:
  Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex  [...]


ensembl_gene_id: Q0JGK4
symbol: SPS1
gene_biotype: protein_coding
description:
  Probable sucrose-phosphate synthase 1; Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP- glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation (By similarity); Belongs to the glycosyltransferase 1 family.


ensembl_gene_id: Q0JGM8
symbol: OsJ_04531
gene_biotype: protein_coding
description:
  Cysteine proteinase inhibitor 5; Specific inhibitor of cysteine proteinases. Probably involved in the regulation of endogenous processes and in defense against pests and pathogens (By similarity); Belongs to the cystatin family. Phytocystatin subfamily.


ensembl_gene_id: Q0JGS5
symbol: PLA2
gene_biotype: protein_coding
description:
  Protein terminal ear1 homolog; Probable RNA-binding protein. Involved in the regular timing (plastochron) of lateral organs formation. May regulate the rate of leaf initiation and the duration of vegetative phase. Seems to be redundant to the function of PLASTOCHRON1, but to act in an independent pathway.


ensembl_gene_id: Q0JGY1
symbol: RPL5A
gene_biotype: protein_coding
description:
  60S ribosomal protein L5-1; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome throug [...]


ensembl_gene_id: Q0JGZ6
symbol: FRK1
gene_biotype: protein_coding
description:
  Fructokinase-1; Fructokinase that may play an important role in maintaining the flux of carbon towards starch formation. May also be involved in a sugar-sensing pathway.


ensembl_gene_id: Q0JH50
symbol: GA20OX2
gene_biotype: protein_coding
description:
  Gibberellin 20 oxidase 2; Key oxidase enzyme in the biosynthesis of gibberellin that catalyzes the conversion of GA53 to GA20 via a three-step oxidation at C-20 of the GA skeleton. Catalyzes the conversion of GA12 to GA9 via a three- step oxidation at C-20 of the GA skeleton. Contributes to the promotion of internode elongation in response to submergence via ethylene and gibberellin signalings. Belongs to the iron/ascorbate-dependent oxidoreductase family. GA20OX subfamily.


ensembl_gene_id: Q0JHF1
symbol: BZIP12
gene_biotype: protein_coding
description:
  bZIP transcription factor 12; Transcription activator that binds to the ABA-responsive elements (ABREs) in vitro. Involved in abiotic stress responses and abscisic acid (ABA) signaling. Involved in the signaling pathway that induces growth inhibition in response to D- allose.


ensembl_gene_id: Q0JHF8
symbol: CFBP1
gene_biotype: protein_coding
description:
  Fructose-1,6-bisphosphatase, cytosolic; Catalyzes the first irreversible reaction from fructose-1,6- bisphosphate to fructose-6-phosphate and inorganic phosphate and plays an important regulatory role in sucrose biosynthesis and metabolism. Required for sucrose supply and tiller bud outgrowth.


ensembl_gene_id: Q0JHP8
symbol: LAC8
gene_biotype: protein_coding
description:
  Laccase-8; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family.


ensembl_gene_id: Q0JHU5
symbol: ERG1
gene_biotype: protein_coding
description:
  Elicitor-responsive protein 1; May play a role in plant defense signaling (Probable). Isoform 2 binds to phospholipids in a Ca(2+)-dependent manner in response to pathogen elicitors.


ensembl_gene_id: Q0JHU7
symbol: MYB3R-2
gene_biotype: protein_coding
description:
  Transcription factor MYB3R-2; Transcription factor involved in abiotic stress responses. May play a regulatory role in tolerance to salt, cold, and drought stresses. Transcriptional activator that binds specifically to a mitosis-specific activator cis-element 5'-(T/C)C(T/C)AACGG(T/C)(T/C)A-3', found in promoters of cyclin genes such as CYCB1-1 and KNOLLE (AC Q84R43). Positively regulates a subset of G2/M phase-specific genes, including CYCB1-1, CYCB2-1, CYCB2-2, and CDC20.1 in response to cold treatment.


ensembl_gene_id: Q0JI49
symbol: CIPK11
gene_biotype: protein_coding
description:
  CBL-interacting protein kinase 11; CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity); Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.


ensembl_gene_id: Q0JIC2
symbol: GAMYB
gene_biotype: protein_coding
description:
  Transcription factor GAMYB; Transcriptional activator of gibberellin-dependent alpha- amylase expression in aleurone cells. Involved in pollen and floral organs development. May bind to the 5'-TAACAAA-3' box of alpha-amylase promoter. Required for anther development. Functions in parallel with UDT1 to regulate early anther development. Functions upstream of the transcription factor TDR and may positively regulate its transcription. Required for pollen development. Probably required for controlling tapetal cell size and promoting tapetal programmed cell death (PCD) during anther develop [...]


ensembl_gene_id: Q0JIL1
symbol: OsJ_03740
gene_biotype: protein_coding
description:
  Probable nucleoredoxin 2; Probable thiol-disulfide oxidoreductase that may participate in various redox reactions.


ensembl_gene_id: Q0JIZ1
symbol: PTAC12
gene_biotype: protein_coding
description:
  Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic; Required for the activity of the plastid-encoded RNA polymerase (PEP) and full expression of genes transcribed by PEP. Required for the proper build-up and formation of the PEP-complex. Binds single-stranded (ss) DNA and RNA, but not double-stranded (ds) DNA.


ensembl_gene_id: Q0JJ01
symbol: NPR2
gene_biotype: protein_coding
description:
  BTB/POZ domain and ankyrin repeat-containing protein NPR2; Does not seem to be involved in defense response against the bacterial blight disease caused by Xanthomonas oryzae pv. oryzae (Xoo). Over-expression of NPR2/NH2 does not confer disease resistance to Xoo.


ensembl_gene_id: Q0JJD1
symbol: PYRC
gene_biotype: protein_coding
description:
  Dihydroorotase, mitochondrial; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class II DHOase subfamily.


ensembl_gene_id: Q0JJE3
symbol: PHP1
gene_biotype: protein_coding
description:
  Pseudo histidine-containing phosphotransfer protein 1; Functions as two-component phosphorelay mediators between cytokinin sensor histidine kinases and response regulators (B-type ARRs). Plays an important role in propagating cytokinin signal transduction.


ensembl_gene_id: Q0JJI1
symbol: Q0JJI1_ORYSJ
gene_biotype: protein_coding
description:
  Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.


ensembl_gene_id: Q0JJS8
symbol: HCF101
gene_biotype: protein_coding
description:
  Fe-S cluster assembly factor HCF101, chloroplastic; Required for photosystem I (PSI) biosynthesis and assembly. May serve as a chloroplast scaffold protein that specifically assembles iron-sulfur (4Fe-4S) clusters and transfers them to the chloroplast PSI and ferredoxin-thioredoxin (FTR) complexes. Probably not required for assembly or stability of plastidic 2Fe-2S clusters (By similarity).


ensembl_gene_id: Q0JJV1
symbol: VDAC4
gene_biotype: protein_coding
description:
  Mitochondrial outer membrane protein porin 4; Forms a channel through the mitochondrial outer membrane that allows diffusion of small hydrophilic molecules. The channel adopts an open conformation at low or zero membrane potential and a closed conformation at potentials above 30-40 mV. The open state has a weak anion selectivity whereas the closed state is cation-selective (By similarity).


ensembl_gene_id: Q0JJZ6
symbol: CACLC_ORYSJ
gene_biotype: protein_coding
description:
  Anoctamin-like protein Os01g0706700; May act as a calcium-activated chloride channel. Belongs to the anoctamin (TC 1.A.17) family.


ensembl_gene_id: Q0JKD0
symbol: GLT1_ORYSJ
gene_biotype: protein_coding
description:
  Glutamate synthase 1 [NADH], chloroplastic; Involved in glutamate biosynthesis and plays a major role in the primary ammonium ions assimilation in seedling roots. May be involved in the reutilization of glutamine in developing organs. Plays a role in the development of tillers; Belongs to the glutamate synthase family.


ensembl_gene_id: Q0JKG7
symbol: IAA5
gene_biotype: protein_coding
description:
  Auxin-responsive protein IAA5; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.


ensembl_gene_id: Q0JKI9
symbol: ARF2
gene_biotype: protein_coding
description:
  Auxin response factor 2; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).


ensembl_gene_id: Q0JKK6
symbol: WOX7
gene_biotype: protein_coding
description:
  WUSCHEL-related homeobox 7; Transcription factor which may be involved in developmental processes; Belongs to the WUS homeobox family.


ensembl_gene_id: Q0JKR7
symbol: Q0JKR7_ORYSJ
gene_biotype: protein_coding
description:
  Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.


ensembl_gene_id: Q0JKT4
symbol: OJ1159_D09.22
gene_biotype: protein_coding
description:
  Phospholipase A1-II 2; Acylhydrolase that catalyzes the hydrolysis of phospholipids at the sn-1 position; Belongs to the AB hydrolase superfamily. Lipase family.


ensembl_gene_id: Q0JKV1
symbol: AKT1
gene_biotype: protein_coding
description:
  Potassium channel AKT1; Highly selective inward-rectifying potassium channel that mediates potassium uptake by plant roots. Assuming opened or closed conformations in response to the voltage difference across the membrane, the channel is activated by hyperpolarization. May be a major salt-sensitive potassium channel in roots.


ensembl_gene_id: Q0JKX1
symbol: HOX3
gene_biotype: protein_coding
description:
  Homeobox-leucine zipper protein HOX3; Probable transcription repressor that binds to the DNA sequence 5'-CAAT[GC]ATTG-3'; Belongs to the HD-ZIP homeobox family. Class II subfamily.


ensembl_gene_id: Q0JKZ0
symbol: SNL6
gene_biotype: protein_coding
description:
  Cinnamoyl-CoA reductase-like SNL6; Involved in defense response. Required for NPR1/NH1-mediated resistance to the bacterial blight pathogen Xanthomomas oryzae pv. oryzae (Xoo). Required for pathogenesis-related (PR) genes expression. May be involved in lignin biosynthesis; Belongs to the 3-beta-HSD family.


ensembl_gene_id: Q0JL44
symbol: SGT1
gene_biotype: protein_coding
description:
  Protein SGT1 homolog; Involved in basal disease resistance to bacterial blight (X.oryzae). May act as positive regulator of basal defense. Probably required for SCF-mediated ubiquitination, by coupling HSP90 to SCF complex for ubiquitination of HSP90 client proteins.


ensembl_gene_id: Q0JL46
symbol: OsJ_02661
gene_biotype: protein_coding
description:
  Neutral ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. Uses ceramide instead of phytoceramide as substrate.


ensembl_gene_id: Q0JLC5
symbol: ABCG36
gene_biotype: protein_coding
description:
  ABC transporter G family member 36; May be a general defense protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.


ensembl_gene_id: Q0JLE4
symbol: KIN8A
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-8A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-8 subfamily.


ensembl_gene_id: Q0JLP9
symbol: PP2C06
gene_biotype: protein_coding
description:
  Probable protein phosphatase 2C 6; Probable protein phosphatase that may function in abscisic acid (ABA) signaling; Belongs to the PP2C family.


ensembl_gene_id: Q0JLS6
symbol: RHD3
gene_biotype: protein_coding
description:
  Protein ROOT HAIR DEFECTIVE 3; Probable GTP-binding protein that may be involved in cell development; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily.


ensembl_gene_id: Q0JLV5
symbol: Q0JLV5_ORYSJ
gene_biotype: protein_coding
description:
  Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.


ensembl_gene_id: Q0JM17
symbol: AIP1
gene_biotype: protein_coding
description:
  DEAD-box ATP-dependent RNA helicase 56; ATP-binding RNA helicase involved in pre-mRNA splicing. Required for the export of mRNA out of the nucleus (By similarity). Required for tapetal programmed cell death (PCD) and degeneration during anther development. Forms dimer with AIP2 and binds the promoter region of the cysteine protease CP1. Can complement the yeast RNA helicase SUB2. Plants silencing AIP1 and AIP2 are male sterile ; Belongs to the DEAD box helicase family. DECD subfamily.


ensembl_gene_id: Q0JM76
symbol: GRXS4
gene_biotype: protein_coding
description:
  Monothiol glutaredoxin-S4, mitochondrial; May only reduce GSH-thiol disulfides, but not protein disulfides; Belongs to the glutaredoxin family. CGFS subfamily.


ensembl_gene_id: Q0JMB2
symbol: B1003B09
gene_biotype: protein_coding
description:
  Zinc finger BED domain-containing protein RICESLEEPER 4; Transposase-like protein that is essential for plant growth and development. May regulate global gene expression by recruiting other cellular factors.


ensembl_gene_id: Q0JMH0
symbol: HACL_ORYSJ
gene_biotype: protein_coding
description:
  2-hydroxyacyl-CoA lyase; Catalyzes a carbon-carbon cleavage reaction; cleaves a 2- hydroxy-3-methylacyl-CoA into formyl-CoA and a 2-methyl-branched fatty aldehyde; Belongs to the TPP enzyme family.


ensembl_gene_id: Q0JMR0
symbol: OPR10
gene_biotype: protein_coding
description:
  Putative 12-oxophytodienoate reductase 10; Putative oxophytodienoate reductase that may be involved in the biosynthesis or metabolism of oxylipin signaling molecules. Belongs to the NADH:flavin oxidoreductase/NADH oxidase family.


ensembl_gene_id: Q0JMV4
symbol: AMY1B
gene_biotype: protein_coding
description:
  Alpha-amylase isozyme C; Important for breakdown of endosperm starch during germination; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: Q0JMW0
symbol: TPK2
gene_biotype: protein_coding
description:
  Thiamine pyrophosphokinase 2; Catalyzes the phosphorylation of thiamine to thiamine pyrophosphate (TPP). TPP is an active cofactor for enzymes involved in glycolysis and energy production. Plant leaves require high levels of TPP for photosynthesis and carbohydrate metabolism (By similarity).


ensembl_gene_id: Q0JMY1
symbol: PARP2-B
gene_biotype: protein_coding
description:
  Poly [ADP-ribose] polymerase 2-B; Involved in the base excision repair (BER) pathway, by catalyzing the poly(ADP-ribosyl)ation of a limited number of acceptor proteins involved in chromatin architecture and in DNA metabolism. This modification follows DNA damages and appears as an obligatory step in a detection/signaling pathway leading to the reparation of DNA strand breaks (By similarity).


ensembl_gene_id: Q0JNB6
symbol: HKT8
gene_biotype: protein_coding
description:
  Cation transporter HKT8; Seems to act as a sodium transporter, which regulates K(+)/Na(+) homeostasis in shoots by recirculating sodium from shoots to roots; Belongs to the TrkH potassium transport family. HKT (TC 2.A.38.3) subfamily.


ensembl_gene_id: Q0JNI9
symbol: PIL15
gene_biotype: protein_coding
description:
  Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15; Transcription factor that may act as negative regulator of phyB-dependent light signal transduction. Belongs to the bHLH protein family.


ensembl_gene_id: Q0JNK5
symbol: OsJ_001282
gene_biotype: protein_coding
description:
  Coatomer subunit beta-2; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity).


ensembl_gene_id: Q0JNL7
symbol: CAM3
gene_biotype: protein_coding
description:
  Calmodulin-3; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.


ensembl_gene_id: Q0JNR2
symbol: P0667A10.20
gene_biotype: protein_coding
description:
  Cysteine proteinase inhibitor 12; Specific inhibitor of cysteine proteinases. Probably involved in the regulation of endogenous processes and in defense against pests and pathogens (By similarity); Belongs to the cystatin family. Phytocystatin subfamily.


ensembl_gene_id: Q0JNS6
symbol: CAM1-1
gene_biotype: protein_coding
description:
  Calmodulin-1; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.


ensembl_gene_id: Q0JP62
symbol: GRXS3
gene_biotype: protein_coding
description:
  Monothiol glutaredoxin-S3; May only reduce GSH-thiol disulfides, but not protein disulfides; Belongs to the glutaredoxin family. CC-type subfamily.


ensembl_gene_id: Q0JPT5
symbol: NIP1-2
gene_biotype: protein_coding
description:
  Aquaporin NIP1-2; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes; Belongs to the MIP/aquaporin (TC 1.A.8) family. NIP (TC 1.A.8.12) subfamily.


ensembl_gene_id: Q0JPV9
symbol: Q0JPV9_ORYSJ
gene_biotype: protein_coding
description:
  RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.


ensembl_gene_id: Q0JQ12
symbol: CKX1
gene_biotype: protein_coding
description:
  Cytokinin dehydrogenase 1; Catalyzes the oxidation of cytokinins, a family of N(6)- substituted adenine derivatives that are plant hormones, where the substituent is an isopentenyl group.


ensembl_gene_id: Q0JQ97
symbol: GRXS1
gene_biotype: protein_coding
description:
  Monothiol glutaredoxin-S1, mitochondrial; May only reduce GSH-thiol disulfides, but not protein disulfides; Belongs to the glutaredoxin family. CGFS subfamily.


ensembl_gene_id: Q0JQF7
symbol: DREB2A
gene_biotype: protein_coding
description:
  Dehydration-responsive element-binding protein 2A; Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3' of the cis-acting dehydration-responsive element (DRE). Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription.


ensembl_gene_id: Q0JQR9
symbol: Q0JQR9_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:002-125-D01, full insert sequence; Belongs to the mitochondrial carrier (TC 2.A.29) family.


ensembl_gene_id: Q0JQS5
symbol: EGY2
gene_biotype: protein_coding
description:
  Probable zinc metalloprotease EGY2, chloroplastic; Probable membrane-associated metalloprotease that may be involved in chloroplast development; Belongs to the peptidase M50B family.


ensembl_gene_id: Q0JQX6
symbol: Q0JQX6_ORYSJ
gene_biotype: protein_coding
description:
  Os01g0133400 protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: Q0JR25
symbol: RBBI3.3
gene_biotype: protein_coding
description:
  Bowman-Birk type bran trypsin inhibitor; Belongs to the Bowman-Birk serine protease inhibitor family.


ensembl_gene_id: Q0JR27
symbol: Q0JR27_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:001-102-D05, full insert sequence; Belongs to the Bowman-Birk serine protease inhibitor family.


ensembl_gene_id: Q0JR29
symbol: Q0JR29_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:001-025-D04, full insert sequence; Belongs to the Bowman-Birk serine protease inhibitor family.


ensembl_gene_id: Q0JR55
symbol: PSS1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--serine O-phosphatidyltransferase 1; Catalyzes a base-exchange reaction in which the polar head group of phosphatidylethanolamine (PE) or phosphatidylcholine (PC) is replaced by L-serine; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: Q0PVB3
symbol: RR7
gene_biotype: protein_coding
description:
  Two-component response regulator ORR7; Functions as response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Type-A response regulators seem to act as negative regulators of the cytokinin signaling.


ensembl_gene_id: Q109B0
symbol: MT21A
gene_biotype: protein_coding
description:
  Class II metallothionein-like protein 1A; Metallothioneins have a high content of cysteine residues that bind various heavy metals.


ensembl_gene_id: Q109G2
symbol: OsJ_32082
gene_biotype: protein_coding
description:
  DEAD-box ATP-dependent RNA helicase 12; ATP-dependent RNA helicase involved in mRNA turnover, and more specifically in mRNA decapping; Belongs to the DEAD box helicase family. DDX6/DHH1 subfamily.


ensembl_gene_id: Q109M1
symbol: Q109M1_ORYSJ
gene_biotype: protein_coding
description:
  Ubiquitin-conjugating enzyme E2-23 kDa, putative, expressed; Belongs to the ubiquitin-conjugating enzyme family.


ensembl_gene_id: Q109M7
symbol: Q109M7_ORYSJ
gene_biotype: protein_coding
description:
  Hsp20/alpha crystallin family protein, expressed; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: Q10A14
symbol: Q10A14_ORYSJ
gene_biotype: protein_coding
description:
  Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: Q10A30
symbol: FBA2
gene_biotype: protein_coding
description:
  Fructose-bisphosphate aldolase 2, cytoplasmic; Fructose-bisphosphate aldolase that plays a key role in glycolysis and gluconeogenesis.


ensembl_gene_id: Q10A37
symbol: Q10A37_ORYSJ
gene_biotype: protein_coding
description:
  Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.


ensembl_gene_id: Q10A62
symbol: Q10A62_ORYSJ
gene_biotype: protein_coding
description:
  Disease resistance protein RPM1, putative, expressed; Belongs to the disease resistance NB-LRR family.


ensembl_gene_id: Q10A77
symbol: TIC62
gene_biotype: protein_coding
description:
  Protein TIC 62, chloroplastic; Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Acts as a membrane anchor of LFNR1 and LFNR2. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids.


ensembl_gene_id: Q10AL3
symbol: Q10AL3_ORYSJ
gene_biotype: protein_coding
description:
  Powdery mildew resistance protein PM3b, putative, expressed; Belongs to the disease resistance NB-LRR family.


ensembl_gene_id: Q10AZ4
symbol: ACT3
gene_biotype: protein_coding
description:
  Actin-3; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells; Belongs to the actin family.


ensembl_gene_id: Q10AZ7
symbol: GPA3
gene_biotype: protein_coding
description:
  Protein GLUTELIN PRECURSOR ACCUMULATION 3; Acts synergistically with RAB5A and VPS9A to regulate dense vesicle-mediated post-Golgi trafficking of major storage proteins in the seed endosperm during grain filling and maturation.


ensembl_gene_id: Q10B19
symbol: TRM13
gene_biotype: protein_coding
description:
  tRNA:m(4)X modification enzyme TRM13; tRNA methylase that catalyzes 2'-O-methyladenosine (Am) nucleoside formation on tRNA(Gly)(GCC) in vitro. May 2'-O-methylate cytidine(4) in tRNA(Pro) and tRNA(Gly)(GCC), and adenosine(4) in tRNA(His). Involved in salt stress tolerance.


ensembl_gene_id: Q10B79
symbol: SPX4
gene_biotype: protein_coding
description:
  SPX domain-containing protein 4; Inositol polyphosphate sensor that associates with transcription factors to regulate Pi starvation responses. The SPX domain provides a basic binding surface for inositol polyphosphate signaling molecules. Interacts with PHR2 to inhibits its translocation to the nucleus and repress its DNA-binding activity, and then negatively regulate Pi signaling.


ensembl_gene_id: Q10BB4
symbol: Q10BB4_ORYSJ
gene_biotype: protein_coding
description:
  Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.


ensembl_gene_id: Q10BT5
symbol: PP2A2
gene_biotype: protein_coding
description:
  Serine/threonine-protein phosphatase PP2A-2 catalytic subunit; Belongs to the PPP phosphatase family. PP-2A subfamily.


ensembl_gene_id: Q10BU2
symbol: GER7
gene_biotype: protein_coding
description:
  Germin-like protein 3-7; May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.


ensembl_gene_id: Q10BX9
symbol: RIBF
gene_biotype: protein_coding
description:
  FAD synthetase, chloroplastic; Catalyzes the adenylation of flavin mononucleotide (FMN) to form flavin adenine dinucleotide (FAD) coenzyme.


ensembl_gene_id: Q10CE4
symbol: GLO1
gene_biotype: protein_coding
description:
  Peroxisomal (S)-2-hydroxy-acid oxidase GLO1; Photorespiratory enzyme that can exert a strong regulation over photosynthesis, possibly through a feed-back inhibition on Rubisco activase. Not required for oxalate accumulation. Belongs to the FMN-dependent alpha-hydroxy acid dehydrogenase family.


ensembl_gene_id: Q10CE7
symbol: GSTU1
gene_biotype: protein_coding
description:
  Probable glutathione S-transferase GSTU1; Conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles; Belongs to the GST superfamily. Tau family.


ensembl_gene_id: Q10CH5
symbol: PIL13
gene_biotype: protein_coding
description:
  Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13; Transcription factor that may act as negative regulator of phyB-dependent light signal transduction. Transcription activator that acts as positive regulator of internode elongation. May function via regulation of cell wall-related genes. May play a role in a drought-associated growth-restriction mechanism in response to drought stress. Belongs to the bHLH protein family.


ensembl_gene_id: Q10CI8
symbol: ORC5
gene_biotype: protein_coding
description:
  Origin of replication complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent. The specific DNA sequences that define origins of replication have not been identified yet. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.


ensembl_gene_id: Q10CQ1
symbol: MADS14
gene_biotype: protein_coding
description:
  MADS-box transcription factor 14; Probable transcription factor. May be involved in the control of flowering time.


ensembl_gene_id: Q10CQ8
symbol: PHYC
gene_biotype: protein_coding
description:
  Phytochrome C; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. Photoconversion of Pr to Pfr induces an array of morphogenic responses, whereas reconversion of Pfr to Pr cancels the induction of those responses. Pfr controls the expression of a number of nuclear genes including those encoding the small subunit of ribulose-bisphosphate carboxylase, chlorophyll A/B binding protein, protochlorophyllide reductas [...]


ensembl_gene_id: Q10CT5
symbol: OsJ_12812
gene_biotype: protein_coding
description:
  Alpha N-terminal protein methyltransferase 1; Alpha-N-methyltransferase that methylates the N-terminus of target proteins containing the N-terminal motif [Ala/Pro/Ser]-Pro-Lys when the initiator Met is cleaved. Specifically catalyzes mono-, di- or tri-methylation of exposed alpha-amino group of Ala or Ser residue in the [Ala/Ser]-Pro-Lys motif and mono- or di-methylation of Pro in the Pro-Pro-Lys motif (By similarity).


ensembl_gene_id: Q10D00
symbol: SUV3
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase SUV3, mitochondrial; Major helicase player in mitochondrial RNA metabolism. Component of the mitochondrial degradosome (mtEXO) complex, that degrades 3' overhang double-stranded RNA with a 3'-to-5' directionality in an ATP-dependent manner (By similarity). ATPase and ATP-dependent multisubstrate helicase, able to unwind double-stranded (ds) DNA and RNA, and RNA/DNA heteroduplexes in the 5'-to-3' direction. Plays a role in the RNA surveillance system in mitochondria; regulates the stability of mature mRNAs, the removal of aberrantly formed mRNAs and the rapid  [...]


ensembl_gene_id: Q10D34
symbol: IAA13
gene_biotype: protein_coding
description:
  Auxin-responsive protein IAA13; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.


ensembl_gene_id: Q10D38
symbol: MRS2-I
gene_biotype: protein_coding
description:
  Magnesium transporter MRS2-I; Magnesium transporter that may mediate the influx of magnesium; Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35.5) family.


ensembl_gene_id: Q10DK7
symbol: ACC1
gene_biotype: protein_coding
description:
  1-aminocyclopropane-1-carboxylate synthase 1; Catalyzes the formation of 1-aminocyclopropane-1-carboxylate, a direct precursor of ethylene in higher plants.


ensembl_gene_id: Q10DU0
symbol: PHYA
gene_biotype: protein_coding
description:
  Phytochrome A; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. Photoconversion of Pr to Pfr induces an array of morphogenic responses, whereas reconversion of Pfr to Pr cancels the induction of those responses. Pfr controls the expression of a number of nuclear genes including those encoding the small subunit of ribulose-bisphosphate carboxylase, chlorophyll A/B binding protein, protochlorophyllide reductas [...]


ensembl_gene_id: Q10DV7
symbol: ACT1
gene_biotype: protein_coding
description:
  Actin-1; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells; Belongs to the actin family.


ensembl_gene_id: Q10DY0
symbol: Q10DY0_ORYSJ
gene_biotype: protein_coding
description:
  GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.


ensembl_gene_id: Q10E50
symbol: PLA2-III
gene_biotype: protein_coding
description:
  Phospholipase A2 homolog 3; PA2 catalyzes the calcium-dependent hydrolysis of the 2-acyl groups in 3-sn-phosphoglycerides. Releases lysophospholipids (LPLs) and free fatty acids (FFAs) from membrane phospholipids in response to hormones and other external stimuli.


ensembl_gene_id: Q10ED2
symbol: OSH43
gene_biotype: protein_coding
description:
  Homeobox protein knotted-1-like 8; Probable transcription factor that may be involved in shoot formation during embryogenesis.


ensembl_gene_id: Q10EK7
symbol: OLE18
gene_biotype: protein_coding
description:
  Oleosin 18 kDa; May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth; Belongs to the oleosin family.


ensembl_gene_id: Q10F03
symbol: FLO6
gene_biotype: protein_coding
description:
  Protein FLOURY ENDOSPERM 6, chloroplastic; Involved in compound starch granule formation and starch synthesis in endosperm. May act as a regulatory scaffolding protein and affect starch synthesis and compound starch granule formation through direct interaction with isoamylase 1 (ISA1). Binds starch, amylopectin and amylose through its C-terminal carbohydrate-binding domain (CBM) in vitro.


ensembl_gene_id: Q10F25
symbol: GATA18
gene_biotype: protein_coding
description:
  GATA transcription factor 18; Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.


ensembl_gene_id: Q10F39
symbol: AGO11
gene_biotype: protein_coding
description:
  Protein argonaute 11; Probably involved in the RNA silencing pathway. May bind to short RNAs such as microRNAs (miRNAs) or short interfering RNAs (siRNAs), and represses the translation of mRNAs which are complementary to them (By similarity).


ensembl_gene_id: Q10FE9
symbol: Q10FE9_ORYSJ
gene_biotype: protein_coding
description:
  GPI mannosyltransferase 1; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis. Transfers the first alpha-1,4-mannose to GlcN- acyl-PI during GPI precursor assembly.


ensembl_gene_id: Q10FF9
symbol: DUT
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP, preventing uracil incorporation into DNA.


ensembl_gene_id: Q10FT0
symbol: PUB24
gene_biotype: protein_coding
description:
  U-box domain-containing protein 24; E3 ubiquitin-protein ligase that functions as a negative regulator of brassinosteroid (BR) signaling. Targets BZR1, a positive regulator of BR signaling pathway, and promotes its degradation via the ubiquitin-26S proteasome pathway.


ensembl_gene_id: Q10G39
symbol: OsJ_11888
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E1 component subunit beta-4, chloroplastic; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3) (By similarity).


ensembl_gene_id: Q10G40
symbol: EXPB12
gene_biotype: protein_coding
description:
  Expansin-B12; May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity).


ensembl_gene_id: Q10G56
symbol: OAT
gene_biotype: protein_coding
description:
  Ornithine aminotransferase, mitochondrial; Confers drought and oxidative stress tolerance mainly through enhancing ROS-scavenging capacity and Pro pre-accumulation.


ensembl_gene_id: Q10G81
symbol: MSI1
gene_biotype: protein_coding
description:
  Histone-binding protein MSI1 homolog; Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Component of several complexes which regulate chromatin metabolism such as the chromatin assembly factor 1 (CAF-1) complex, which is required for chromatin assembly following DNA replication and DNA repair (By similarity).


ensembl_gene_id: Q10GB1
symbol: NEK1
gene_biotype: protein_coding
description:
  Serine/threonine-protein kinase Nek1; May be involved in plant development processes. Belongs to the protein kinase superfamily. NEK Ser/Thr protein kinase family. NIMA subfamily.


ensembl_gene_id: Q10HD0
symbol: RCABP89
gene_biotype: protein_coding
description:
  Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.


ensembl_gene_id: Q10HL3
symbol: DCL2A
gene_biotype: protein_coding
description:
  Endoribonuclease Dicer homolog 2a; Probably involved in the RNA silencing pathway. May cleave double-stranded RNA to produce short 21-24 nucleotides (nt) RNAs which target the selective destruction of complementary RNAs (By similarity). Belongs to the helicase family. Dicer subfamily.


ensembl_gene_id: Q10I20
symbol: XAT3
gene_biotype: protein_coding
description:
  Alpha-1,3-arabinosyltransferase XAT3; Glycosyltransferase involved in the arabinosylation of xylan, the major hemicellulose (non-cellulosic component) of primary and secondary walls of angiosperms. Possesses alpha-1,3- arabinosyltransferase activity, transferring an arabinofuranose residue to the xylan backbone.


ensembl_gene_id: Q10I26
symbol: EIF4A3B
gene_biotype: protein_coding
description:
  Eukaryotic initiation factor 4A-III homolog B; ATP-dependent RNA helicase. Core component of the splicing- dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the core components remain bound to spliced mRNAs throu [...]


ensembl_gene_id: Q10J20
symbol: D14L
gene_biotype: protein_coding
description:
  Probable esterase D14L; May be involved in strigolactone signaling pathway (By similarity). Essential for plant responses to karrikins, a class of butenolide compounds, structurally similar to strigolactones, released from burning vegetation that stimulate seed germination and enhance seedling photomorphogenesis. Mediates a specific perception of karrikin. Required for the establishment of symbiosis with the arbuscular mycorrhizal fungi (AMF) Rhizophagus irregularis and Gigaspora rosea. Karrikin binding induces a conformational change (By similarity).


ensembl_gene_id: Q10J94
symbol: OsJ_11358
gene_biotype: protein_coding
description:
  Cysteine proteinase inhibitor 8; Specific inhibitor of cysteine proteinases. Probably involved in the regulation of endogenous processes and in defense against pests and pathogens (By similarity); Belongs to the cystatin family. Phytocystatin subfamily.


ensembl_gene_id: Q10JL1
symbol: BC1
gene_biotype: protein_coding
description:
  COBRA-like protein 5; Involved in determining the orientation of cell expansion, probably by playing an important role in cellulose deposition. May act by recruiting cellulose synthesizing complexes to discrete positions on the cell surface.


ensembl_gene_id: Q10K62
symbol: HO2
gene_biotype: protein_coding
description:
  Probable inactive heme oxygenase 2, chloroplastic; Probable inactive heme oxygenase that may play a role in the regulation of phytochrome assembly and photomorphogenesis.


ensembl_gene_id: Q10KF0
symbol: PAB1
gene_biotype: protein_coding
description:
  Proteasome subunit alpha type-2; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity; Belongs to the peptidase T1A family.


ensembl_gene_id: Q10KF5
symbol: TPP9
gene_biotype: protein_coding
description:
  Probable trehalose-phosphate phosphatase 9; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. Trehalose accumulation in plant may improve abiotic stress tolerance (By similarity).


ensembl_gene_id: Q10KL8
symbol: IRO3
gene_biotype: protein_coding
description:
  Protein IRON-RELATED TRANSCRIPTION FACTOR 3; Transcription factor that acts as negative regulator of the iron deficiency response. Suppresses the induction of iron deficiency responsive genes, such as NAS1, NAS2, IRO2, IRT1, YSL15, and NRAMP1 ; Belongs to the bHLH protein family.


ensembl_gene_id: Q10KN4
symbol: EXPA21
gene_biotype: protein_coding
description:
  Expansin-A21; May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity); Belongs to the expansin family. Expansin A subfamily.


ensembl_gene_id: Q10KT6
symbol: COPT4
gene_biotype: protein_coding
description:
  Copper transporter 4; Involved in the transport of copper; Belongs to the copper transporter (Ctr) (TC 1.A.56) family. SLC31A subfamily.


ensembl_gene_id: Q10KX8
symbol: HSFB4D
gene_biotype: protein_coding
description:
  Heat stress transcription factor B-4d; Transcriptional regulator that specifically binds DNA of heat shock promoter elements (HSE).


ensembl_gene_id: Q10L05
symbol: Q10L05_ORYSJ
gene_biotype: protein_coding
description:
  Sugar transporter family protein, expressed; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: Q10L32
symbol: MSRB5
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase B5; Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. MSRB family specifically reduces the MetSO R- enantiomer (By similarity).


ensembl_gene_id: Q10L71
symbol: VLN2
gene_biotype: protein_coding
description:
  Villin-2; Ca(2+)-regulated actin-binding protein (By similarity). Binds actin microfilaments (MFs). Involved in actin filament bundling, severing and capping. Caps the barbed end of actin filaments and is able to sever them in a calcium-dependent manner. May regulate cell expansion in developing organs. Required for the regulation of plant architecture via the modulation of polar auxin transport and root gravitropism ; Belongs to the villin/gelsolin family.


ensembl_gene_id: Q10L91
symbol: DIS1
gene_biotype: protein_coding
description:
  E3 ubiquitin-protein ligase DIS1; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates (Probable). Plays a negative role in drought stress tolerance through transcriptional and post-translational regulation of diverse stress-related genes. Interacts with the serine/threonine- protein kinase NEK6 and promotes its degradation via the 26S proteasome-dependent  [...]


ensembl_gene_id: Q10L93
symbol: Q10L93_ORYSJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L6, putative, expressed; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: Q10LF7
symbol: NUG2
gene_biotype: protein_coding
description:
  Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: Q10LH0
symbol: DVR
gene_biotype: protein_coding
description:
  Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic; Catalyzes the conversion of divinyl chlorophyllide to monovinyl chlorophyllide. Reduces the 8-vinyl group of the tetrapyrrole to an ethyl group using NADPH as the reductant. Can use (3,8-divinyl)- chlorophyllide a (DV-Chlidea) > (3,8-divinyl)-chlorophyll a (DV-Chla) > (3,8-divinyl)-protochlorophyllide a (DV-Pchlidea) > (3,8-divinyl)- magnesium-protoporphyrin IX monomethyl ester (DV-MPE) > (3,8-divinyl)- magnesium-protoporphyrin IX (DV-Mg-Proto) as substrates.


ensembl_gene_id: Q10LI1
symbol: SRFP1
gene_biotype: protein_coding
description:
  E3 ubiquitin-protein ligase SRFP1; Possesses E3 ubiquitin-protein ligase activity in vitro. Possesses transactivation activity in yeast cells. May modulate abiotic stress responses by negatively regulating antioxidant enzymes-mediated reactive oxygen species (ROS) removal.


ensembl_gene_id: Q10LI8
symbol: SWEET12
gene_biotype: protein_coding
description:
  Bidirectional sugar transporter SWEET12; Mediates both low-affinity uptake and efflux of sugar across the plasma membrane.


ensembl_gene_id: Q10LJ0
symbol: ABH1
gene_biotype: protein_coding
description:
  Nuclear cap-binding protein subunit 1; Component of the cap-binding complex (CBC), which binds cotranscriptionally to the 5'-cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary miRNA processing. In the CBC complex, ABH1/CBP80 does not bind directly capped RNAs (m7GpppG-capped RNA) but is required to stabilize the movement of the N-terminal loop of CBP20 and lock the CBC into a high affinity cap-binding state [...]


ensembl_gene_id: Q10LJ2
symbol: MTP2
gene_biotype: protein_coding
description:
  Metal tolerance protein 2; Involved in sequestration of excess metal in the cytoplasm into vacuoles to maintain metal homeostasis; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. SLC30A subfamily.


ensembl_gene_id: Q10LN5
symbol: SWEET16
gene_biotype: protein_coding
description:
  Bidirectional sugar transporter SWEET16; Mediates both low-affinity uptake and efflux of sugar across the plasma membrane.


ensembl_gene_id: Q10LP5
symbol: SUS4
gene_biotype: protein_coding
description:
  Sucrose synthase 4; Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways; Belongs to the glycosyltransferase 1 family. Plant sucrose synthase subfamily.


ensembl_gene_id: Q10LQ2
symbol: CIPK10
gene_biotype: protein_coding
description:
  CBL-interacting protein kinase 10; CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity); Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.


ensembl_gene_id: Q10LR9
symbol: OsJ_10762
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase 2, chloroplastic; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: Q10LZ1
symbol: PHR1
gene_biotype: protein_coding
description:
  Protein PHOSPHATE STARVATION RESPONSE 1; Transcription factor involved in phosphate starvation signaling. Binds to P1BS, an imperfect palindromic sequence 5'-GNATATNC-3', to promote the expression of inorganic phosphate (Pi) starvation-responsive genes. Functionally redundant with PHR2 and PHR3 in regulating Pi starvation response and Pi homeostasis.


ensembl_gene_id: Q10M12
symbol: R40C1
gene_biotype: protein_coding
description:
  Ricin B-like lectin R40C1; Lectin which binds carbohydrates in vitro. Interacts through its lectin domain with glycan structures containing specific motifs.


ensembl_gene_id: Q10M18
symbol: TRL12_ORYSJ
gene_biotype: protein_coding
description:
  Thioredoxin-like 1-2, chloroplastic; Probable thiol-disulfide oxidoreductase that may participate in various redox reactions; Belongs to the thioredoxin family.


ensembl_gene_id: Q10M29
symbol: WOX6
gene_biotype: protein_coding
description:
  WUSCHEL-related homeobox 6; Transcription factor which may be involved in developmental processes; Belongs to the WUS homeobox family.


ensembl_gene_id: Q10M35
symbol: Q10M35_ORYSJ
gene_biotype: protein_coding
description:
  Secondary cell wall-related glycosyltransferase family 47, putative, expressed; Belongs to the glycosyltransferase 47 family.


ensembl_gene_id: Q10M41
symbol: EIL1A
gene_biotype: protein_coding
description:
  Protein ETHYLENE-INSENSITIVE 3-like 1a; Transcription factor acting as a positive regulator in the ethylene response pathway. Required for the inhibition of root growth by ethylene in etiolated seedlings. Functions upstream of the auxin biosynthetic gene YUCCA8 and directly activates its expression. Functions downstream of the ethylene signaling factor EIN2 in disease resistance against the rice blast fungus (Magnaporthe oryzae). Binds directly to the promoters of the NADPH oxidases RBOHA and RBOHB, and the jasmonate biosynthetic gene OPR4 to activate their expression during fungal inf [...]


ensembl_gene_id: Q10M50
symbol: CHLH
gene_biotype: protein_coding
description:
  Magnesium-chelatase subunit ChlH, chloroplastic; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. The reaction takes place in two steps, with an ATP-dependent activation followed by an ATP-dependent chelation step. May be involved in the plastid-to-nucleus retrograde signaling.


ensembl_gene_id: Q10M74
symbol: V2
gene_biotype: protein_coding
description:
  Guanylate kinase 2, chloroplastic/mitochondrial; Essential for recycling GMP and indirectly, cGMP. Essential for chloroplast differentiation at early stage of leaf development. May not be involved in the synthesis and maintenance of the organellar DNA during leaf development.


ensembl_gene_id: Q10M80
symbol: SIP2-1
gene_biotype: protein_coding
description:
  Aquaporin SIP2-1; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes; Belongs to the MIP/aquaporin (TC 1.A.8) family. SIP (TC 1.A.8.10) subfamily.


ensembl_gene_id: Q10M94
symbol: Q10M94_ORYSJ
gene_biotype: protein_coding
description:
  Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis.


ensembl_gene_id: Q10MB4
symbol: MYB2
gene_biotype: protein_coding
description:
  Transcription factor MYB2; Transcription factor involved in abiotic stress responses. Plays a regulatory role in tolerance to salt, cold, and drought stresses. Regulates positively the expression of genes involved in proline synthesis and transport, and genes involved in reactive oxygen species (ROS) scavenging such as peroxidase, superoxide dismutase and catalase during salt stress. Transactivates stress-related genes, including LEA3, RAB16A and DREB2A during salt stress.


ensembl_gene_id: Q10MC0
symbol: NIN1
gene_biotype: protein_coding
description:
  Neutral/alkaline invertase 1, mitochondrial; Mitochondrial invertase that cleaves sucrose into glucose and fructose.


ensembl_gene_id: Q10MG9
symbol: PHYB
gene_biotype: protein_coding
description:
  Phytochrome B; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. Photoconversion of Pr to Pfr induces an array of morphogenic responses, whereas reconversion of Pfr to Pr cancels the induction of those responses. Pfr controls the expression of a number of nuclear genes including those encoding the small subunit of ribulose-bisphosphate carboxylase, chlorophyll A/B binding protein, protochlorophyllide reductas [...]


ensembl_gene_id: Q10MI0
symbol: SRL2
gene_biotype: protein_coding
description:
  Protein SEMI-ROLLED LEAF 2; Functions in regulating leaf rolling through abaxial side leaf cell differentiation. May be involved in the transdifferentiation process from mesophyll cells to sclerenchymatous cells.


ensembl_gene_id: Q10MI4
symbol: EZ1
gene_biotype: protein_coding
description:
  Histone-lysine N-methyltransferase EZ1; Polycomb group (PcG) protein. Catalytic subunit of some PcG multiprotein complex, which methylates 'Lys-27' of histone H3, leading to transcriptional repression of the affected target genes. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development (Probable). Involved in the regulation of flowering. Promotes flowering under short day ( [...]


ensembl_gene_id: Q10MI9
symbol: NAS2
gene_biotype: protein_coding
description:
  Nicotianamine synthase 2; Synthesizes nicotianamine, a polyamine that is the first intermediate in the synthesis of the phytosiderophores of the mugineic acid type found in gramineae which serve as a sensor for the physiological iron status within the plant, and/or might be involved in the transport of iron; Belongs to the nicotianamine synthase (NAS)-like family.


ensembl_gene_id: Q10MJ1
symbol: GEP
gene_biotype: protein_coding
description:
  Probable glutamyl endopeptidase, chloroplastic; Serine-type protease active in vitro against the LHCII N- terminal. Cleaves its substrate on the carboxy-side of Glu residues (By similarity); Belongs to the peptidase S9D family.


ensembl_gene_id: Q10MK2
symbol: GT4
gene_biotype: protein_coding
description:
  Probable glycosyltransferase 4; Probable glycosyltransferase that may be involved in the biosynthesis of xyloglucan.


ensembl_gene_id: Q10MN2
symbol: PEX11-3
gene_biotype: protein_coding
description:
  Peroxisomal membrane protein 11-3; Involved in peroxisomal proliferation; Belongs to the peroxin-11 family.


ensembl_gene_id: Q10MN5
symbol: KIN14F
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-14F; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-14 subfamily.


ensembl_gene_id: Q10MQ0
symbol: XXT1
gene_biotype: protein_coding
description:
  Probable xyloglucan 6-xylosyltransferase 1; Probable xyloglucan xylosyltransferase involved in the biosynthesis of xyloglucan in roots; Belongs to the glycosyltransferase 34 family.


ensembl_gene_id: Q10MQ2
symbol: AGD2
gene_biotype: protein_coding
description:
  Probable LL-diaminopimelate aminotransferase, chloroplastic; Required for lysine biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate, a reaction that requires three enzymes in E.coli (By similarity); Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. LL-diaminopimelate aminotransferase subfamily.


ensembl_gene_id: Q10MQ8
symbol: Q10MQ8_ORYSJ
gene_biotype: protein_coding
description:
  Sex determination protein tasselseed 2, putative, expressed; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Q10MS8
symbol: Q10MS8_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:001-016-B10, full insert sequence; Belongs to the mitochondrial carrier (TC 2.A.29) family.


ensembl_gene_id: Q10MX3
symbol: ASNS1_ORYSJ
gene_biotype: protein_coding
description:
  Asparagine synthetase [glutamine-hydrolyzing] 1; Essential for nitrogen assimilation, distribution and remobilization within the plant via the phloem.


ensembl_gene_id: Q10MY3
symbol: Q10MY3_ORYSJ
gene_biotype: protein_coding
description:
  Oxidoreductase, 2OG-Fe oxygenase family protein, expressed; Belongs to the iron/ascorbate-dependent oxidoreductase family.


ensembl_gene_id: Q10N03
symbol: MT1B
gene_biotype: protein_coding
description:
  Metallothionein-like protein 1B; Metallothioneins have a high content of cysteine residues that bind various heavy metals (Probable). Functions as metal chelator of nickel (Ni), cadmium (Cd), zinc (Zn) and copper (Cu). Possesses higher affinity for Ni and Cd ions compared to Zn and Cu ions ; Belongs to the metallothionein superfamily. Type 15 family.


ensembl_gene_id: Q10N04
symbol: PDIL5-1
gene_biotype: protein_coding
description:
  Protein disulfide isomerase-like 5-1; Acts as a protein-folding catalyst that interacts with nascent polypeptides to catalyze the formation, isomerization, and reduction or oxidation of disulfide bonds. May play a role in storage protein biogenesis (By similarity).


ensembl_gene_id: Q10N05
symbol: GT32_ORYSJ
gene_biotype: protein_coding
description:
  Probable glucuronosyltransferase Os03g0287800; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls; Belongs to the glycosyltransferase 43 family.


ensembl_gene_id: Q10N20
symbol: MPK5
gene_biotype: protein_coding
description:
  Mitogen-activated protein kinase 5; Involved in disease resistance and abiotic stress tolerance signaling pathways. Acts as a positive regulator of drought, salt and cold tolerance. Negatively modulates pathogenesis-related (PR) gene expression and broad-spectrum disease resistance. Functions downstream of CPK18 in a signaling pathway that represses defense gene expression and negatively regulates resistance to rice blast fungus. Phosphorylated by CPK18 at Thr-14 and Thr-32 and activated independently of MAP kinase kinase (MKK) phosphorylation ; Belongs to the protein kinase superfamil [...]


ensembl_gene_id: Q10N34
symbol: PRR73
gene_biotype: protein_coding
description:
  Two-component response regulator-like PRR73; Controls photoperiodic flowering response. Seems to be one of the component of the circadian clock. Expression of several members of the ARR-like family is controlled by circadian rhythm. The particular coordinated sequential expression of PRR73, PRR37, PRR95, PRR59 and PPR1 result to circadian waves that may be at the basis of the endogenous circadian clock (By similarity).


ensembl_gene_id: Q10N79
symbol: ARGJ_ORYSJ
gene_biotype: protein_coding
description:
  Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.


ensembl_gene_id: Q10N87
symbol: Q10N87_ORYSJ
gene_biotype: protein_coding
description:
  Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.


ensembl_gene_id: Q10NA1
symbol: Q10NA1_ORYSJ
gene_biotype: protein_coding
description:
  Heat shock cognate 70 kDa protein, putative, expressed; Belongs to the heat shock protein 70 family.


ensembl_gene_id: Q10ND7
symbol: LAC10
gene_biotype: protein_coding
description:
  Laccase-10; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family.


ensembl_gene_id: Q10NH4
symbol: Q10NH4_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:001-046-B08, full insert sequence; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Q10NJ7
symbol: Q10NJ7_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:001-119-A04, full insert sequence; Belongs to the mitochondrial carrier (TC 2.A.29) family.


ensembl_gene_id: Q10NK4
symbol: Q10NK4_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J023120G02, full insert sequence; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q10NQ3
symbol: VPS9A
gene_biotype: protein_coding
description:
  Vacuolar protein sorting-associated protein 9A; Functions as guanine nucleotide exchange factor (GEF) for Rab small GTPases. Activates specifically RAB5A protein (Probable). Functions cooperatively with RAB5A to regulate post-Golgi dense vesicle-mediated transport of storage proteins to the type II protein bodies (PBII) protein storage vacuoles in developing endosperm.


ensembl_gene_id: Q10NQ9
symbol: NCBP
gene_biotype: protein_coding
description:
  Eukaryotic translation initiation factor NCBP; Recognizes and binds the 7-methylguanosine-containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures; Belongs to the eukaryotic initiation factor 4E family.


ensembl_gene_id: Q10NS9
symbol: Q10NS9_ORYSJ
gene_biotype: protein_coding
description:
  Dynamin family protein, putative, expressed; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.


ensembl_gene_id: Q10NT7
symbol: HRD3
gene_biotype: protein_coding
description:
  ERAD-associated E3 ubiquitin-protein ligase component HRD3; Component of the endoplasmic reticulum (ER) quality control system called ER-associated degradation (ERAD) and involved in ubiquitin-dependent degradation of misfolded endoplasmic reticulum proteins. Functions as an ERAD substrate-recruiting factor that recognizes misfolded proteins for the HRD1 E3 ubiquitin ligase complex. Belongs to the sel-1 family.


ensembl_gene_id: Q10NW0
symbol: Q10NW0_ORYSJ
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase hisHF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The glutaminase domain produces the ammonia necessary for the cyclase domain to produce IGP and AICAR from PRFAR. The ammonia is channeled to the active site of the cyclase domain. In the C-terminal section; belongs to the HisA/HisF family.


ensembl_gene_id: Q10NX8
symbol: BGAL6_ORYSJ
gene_biotype: protein_coding
description:
  Beta-galactosidase 6; Releases galactose by hydrolysis of plant cell wall galactose-containing polysaccharides such as galacto-xyloglucan, pectic galactan and galactan (in vitro); Belongs to the glycosyl hydrolase 35 family.


ensembl_gene_id: Q10NY2
symbol: TPR3
gene_biotype: protein_coding
description:
  Protein TPR3; Probable downstream regulator of strigolactones signaling (By similarity). Functions in a complex with MODD and HDAC1 to down- regulate the histone acetylation level at BZIP46 target genes. BZIP46 is a positive regulator of abscisic acid (ABA) signaling and drought stress tolerance.


ensembl_gene_id: Q10P01
symbol: OsJ_10166
gene_biotype: protein_coding
description:
  Long chain base biosynthesis protein 1a; Serine palmitoyltransferase (SPT). The heterodimer formed with LCB2 constitutes the catalytic core (By similarity). Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: Q10P09
symbol: Q10P09_ORYSJ
gene_biotype: protein_coding
description:
  Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.


ensembl_gene_id: Q10P67
symbol: DAPB2
gene_biotype: protein_coding
description:
  Probable 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: Q10P83
symbol: ACBP5
gene_biotype: protein_coding
description:
  Acyl-CoA-binding domain-containing protein 5; Binds medium- and long-chain acyl-CoA esters with high affinity. Can interact in vitro with palmitoyl-CoA and linolenoyl-CoA. Binds phosphatidic acid (PA) and phosphatidylcholine (PC) in vitro. May play a role in the biosynthesis of phospholipids ; Belongs to the ACBP family.


ensembl_gene_id: Q10P87
symbol: ADF5
gene_biotype: protein_coding
description:
  Actin-depolymerizing factor 5; Actin-depolymerizing protein. Severs actin filaments (F- actin) and binds to actin monomers (By similarity).


ensembl_gene_id: Q10PA9
symbol: Q10PA9_ORYSJ
gene_biotype: protein_coding
description:
  Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.


ensembl_gene_id: Q10PB3
symbol: Q10PB3_ORYSJ
gene_biotype: protein_coding
description:
  Translocase of chloroplast; GTPase involved in protein precursor import into chloroplasts. Seems to recognize chloroplast-destined precursor proteins and regulate their presentation to the translocation channel through GTP hydrolysis.


ensembl_gene_id: Q10PC5
symbol: TTA
gene_biotype: protein_coding
description:
  Protein TITANIA; Probable transcription factor that functions as regulator of metal transporter genes responsible for essential metals delivery to shoots and normal plant growth. Required for the maintenance of metal transporter gene expression, such as IRT1, IRT2, ZIP1, ZIP9, NRAMP1 and NRAMP5.


ensembl_gene_id: Q10PE7
symbol: DMAS1
gene_biotype: protein_coding
description:
  Deoxymugineic acid synthase 1; Catalyzes the reduction of a 3''-keto intermediate during the biosynthesis of 2'-deoxymugineic acid (DMA) from L-Met. Involved in the formation of phytosiderophores (MAs) belonging to the mugineic acid family and required to acquire iron; Belongs to the aldo/keto reductase family.


ensembl_gene_id: Q10PI5
symbol: ADIPOR3
gene_biotype: protein_coding
description:
  Heptahelical transmembrane protein ADIPOR3; May play a role in abiotic stress response; Belongs to the ADIPOR family.


ensembl_gene_id: Q10PI9
symbol: TUD1
gene_biotype: protein_coding
description:
  U-box domain-containing protein 75; E3 ubiquitin ligase that may function as positive regulator of brassinosteroid (BR) signaling. Possesses E3 ubiquitin ligase in vitro. Acts together with the heterotrimeric G alpha subunit GPA1 at the plasma membrane to mediate a BR signaling pathway that affects plant growth and development. Does not seem to be involved in gibberellin or cytokinin responses.


ensembl_gene_id: Q10PL5
symbol: ITPK2
gene_biotype: protein_coding
description:
  Inositol-tetrakisphosphate 1-kinase 2; Kinase that can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4 or Ins(1,3,4)P3 and participates in phytic acid biosynthesis in developing seeds. Phytic acid is the primary storage form of phosphorus in cereal grains and other plant seeds (By similarity). May be involved in the negative regulation of osmotic stress signaling. Belongs to the ITPK1 family.


ensembl_gene_id: Q10PM6
symbol: Q10PM6_ORYSJ
gene_biotype: protein_coding
description:
  Receptor protein kinase CLAVATA1, putative, expressed; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q10PP8
symbol: MTP4
gene_biotype: protein_coding
description:
  Metal tolerance protein 4; Involved in sequestration of excess metal in the cytoplasm into vacuoles to maintain metal homeostasis; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. SLC30A subfamily.


ensembl_gene_id: Q10PQ9
symbol: SDS
gene_biotype: protein_coding
description:
  Cyclin-SDS-like; Meiosis-specific cyclin. Required for normal homolog synapsis and recombination in early to mid-prophase 1.


ensembl_gene_id: Q10PR4
symbol: HSFA9
gene_biotype: protein_coding
description:
  Heat stress transcription factor A-9; Transcriptional regulator that specifically binds DNA of heat shock promoter elements (HSE); Belongs to the HSF family. Class A subfamily.


ensembl_gene_id: Q10PS6
symbol: CAD9
gene_biotype: protein_coding
description:
  Probable cinnamyl alcohol dehydrogenase 9; Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers. Catalyzes the NADPH- dependent reduction of coniferaldehyde, 5-hydroxyconiferaldehyde, sinapaldehyde, 4-coumaraldehyde and caffeyl aldehyde to their respective alcohols.


ensembl_gene_id: Q10PV6
symbol: Q10PV6_ORYSJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L15, chloroplast, putative, expressed; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: Q10PW2
symbol: TubA
gene_biotype: protein_coding
description:
  Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.


ensembl_gene_id: Q10PW9
symbol: MST4
gene_biotype: protein_coding
description:
  Sugar transport protein MST4; Mediates active uptake of hexoses by sugar:proton symport (Probable). Can transport glucose, fructose, mannose and galactose. Can transport xylose and ribose.


ensembl_gene_id: Q10PZ4
symbol: ATP4_ORYSJ
gene_biotype: protein_coding
description:
  Pentatricopeptide repeat-containing protein ATP4 homolog, chloroplastic; Involved in translation and accumulation of chloroplast ATP synthase subunits; Belongs to the PPR family. P subfamily.


ensembl_gene_id: Q10PZ6
symbol: MAP70.4
gene_biotype: protein_coding
description:
  Microtubule-associated protein 70-4; Plant-specific protein that interact with microtubules. Belongs to the MAP70 family.


ensembl_gene_id: Q10PZ9
symbol: MADS1
gene_biotype: protein_coding
description:
  MADS-box transcription factor 1; Probable transcription factor involved in the development of floral organs. Required for the formation of inner floral organs (lodicules, stamens and carpels, or whorls 2, 3 and 4) and the lemma and palea (whorl 1), which are grass floral organs analogous to sepals. May be involved in the control of flowering time. Seems to act as transcriptional activator. May act upstream of the auxin-responsive protein GH3.8.


ensembl_gene_id: Q10Q07
symbol: MODD
gene_biotype: protein_coding
description:
  Ninja-family protein MODD; Acts as negative regulator of abscisic acid (ABA) signaling and drought tolerance. Mediates deactivation and degradation of BZIP46, a positive regulator of ABA signaling and drought stress tolerance. Represses BZIP46 activity via interaction with the TPR3-HDAC1 corepressor complex and down-regulation of the histone acetylation level at BZIP46 target genes. Promotes BZIP46 degradation via interaction with the U-box type ubiquitin E3 ligase PUB70.


ensembl_gene_id: Q10Q08
symbol: RPA1B
gene_biotype: protein_coding
description:
  Replication protein A 70 kDa DNA-binding subunit B; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses (By similarity).


ensembl_gene_id: Q10Q11
symbol: Q10Q11_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J033119F13, full insert sequence; Belongs to the mitochondrial carrier (TC 2.A.29) family.


ensembl_gene_id: Q10Q18
symbol: Q10Q18_ORYSJ
gene_biotype: protein_coding
description:
  Protein transport protein Sec61 alpha subunit isoform 2, putative, expressed; Belongs to the SecY/SEC61-alpha family.


ensembl_gene_id: Q10Q21
symbol: Q10Q21_ORYSJ
gene_biotype: protein_coding
description:
  Mitochondrial processing peptidase beta subunit, mitochondrial, putative, expressed; Belongs to the peptidase M16 family.


ensembl_gene_id: Q10Q46
symbol: CYT6_ORYSJ
gene_biotype: protein_coding
description:
  Cysteine proteinase inhibitor 6; Specific inhibitor of cysteine proteinases. Probably involved in the regulation of endogenous processes and in defense against pests and pathogens (By similarity); Belongs to the cystatin family. Phytocystatin subfamily.


ensembl_gene_id: Q10Q47
symbol: OsJ_09871
gene_biotype: protein_coding
description:
  Putative cysteine proteinase inhibitor 7; Specific inhibitor of cysteine proteinases. Probably involved in the regulation of endogenous processes and in defense against pests and pathogens (By similarity); Belongs to the cystatin family. Phytocystatin subfamily.


ensembl_gene_id: Q10Q48
symbol: OsJ_09870
gene_biotype: protein_coding
description:
  Putative cysteine proteinase inhibitor 9; Specific inhibitor of cysteine proteinases. Probably involved in the regulation of endogenous processes and in defense against pests and pathogens (By similarity); Belongs to the cystatin family. Phytocystatin subfamily.


ensembl_gene_id: Q10Q53
symbol: Q10Q53_ORYSJ
gene_biotype: protein_coding
description:
  Methionyl-tRNA synthetase, putative, expressed; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: Q10Q80
symbol: ERV1
gene_biotype: protein_coding
description:
  FAD-linked sulfhydryl oxidase ERV1; FAD-dependent sulfhydryl oxidase that catalyzes disulfide bond formation (By similarity). Required for the import and folding of small cysteine-containing proteins in the mitochondrial intermembrane space. Forms a redox cycle with MIA40 that involves a disulfide relay system. Important for maintaining the cysteine residues in MIA40 in an oxidized state (By similarity).


ensembl_gene_id: Q10QA5
symbol: D14
gene_biotype: protein_coding
description:
  Strigolactone esterase D14; Involved in strigolactone (SL) signaling pathway. May function downstream of SL synthesis, as a component of hormone signaling or as an enzyme that participates in the conversion of SL to the bioactive form. Strigolactones are hormones that inhibit tillering and shoot branching through the MAX-dependent pathway, contribute to the regulation of shoot architectural response to phosphate-limiting conditions and function as rhizosphere signal that stimulates hyphal branching of arbuscular mycorrhizal fungi and trigger seed germination of root parasitic weeds. St [...]


ensembl_gene_id: Q10QD5
symbol: Q10QD5_ORYSJ
gene_biotype: protein_coding
description:
  Small GTP-binding protein domain containing protein, expressed; Belongs to the small GTPase superfamily. Arf family.


ensembl_gene_id: Q10QD6
symbol: Q10QD6_ORYSJ
gene_biotype: protein_coding
description:
  SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.


ensembl_gene_id: Q10QG5
symbol: Q10QG5_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J023048F11, full insert sequence; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: Q10QI6
symbol: Q10QI6_ORYSJ
gene_biotype: protein_coding
description:
  Probable ribosome biogenesis protein LOC_Os03g09920; Probable pre-rRNA processing protein involved in ribosome biogenesis.


ensembl_gene_id: Q10QL5
symbol: BIPP2C1
gene_biotype: protein_coding
description:
  Probable protein phosphatase 2C BIPP2C1; May play a role in responses to biotic and abiotic stresses. Belongs to the PP2C family.


ensembl_gene_id: Q10QM8
symbol: Q10QM8_ORYSJ
gene_biotype: protein_coding
description:
  cDNA clone:J013064M16, full insert sequence; Belongs to the mitochondrial carrier (TC 2.A.29) family.


ensembl_gene_id: Q10QR9
symbol: UROS
gene_biotype: protein_coding
description:
  Uroporphyrinogen-III synthase, chloroplastic; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III, a precursor of tetrapyrroles such as chlorophyll, heme and phycobilins. Belongs to the uroporphyrinogen-III synthase family.


ensembl_gene_id: Q10QS7
symbol: ORC2
gene_biotype: protein_coding
description:
  Origin of replication complex subunit 2; Essential protein (By similarity). Component of the origin recognition complex (ORC) that binds origins of replication. DNA- binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication (By similarity); Belongs to the ORC2 family.


ensembl_gene_id: Q10QU9
symbol: Q10QU9_ORYSJ
gene_biotype: protein_coding
description:
  40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.


ensembl_gene_id: Q10R09
symbol: BG1
gene_biotype: protein_coding
description:
  Protein BIG GRAIN 1; Involved in auxin transport. Positive regulator of the auxin signaling pathway involved in gravitropism, plant growth and grain development.


ensembl_gene_id: Q10R17
symbol: PURA1
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase 1, chloroplastic; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (By similarity). Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: Q10R18
symbol: DREB2E
gene_biotype: protein_coding
description:
  Dehydration-responsive element-binding protein 2E; Probable transcriptional activator that binds to the DNA sequence 5'-[AG]CCGAC-3' of the cis-acting dehydration-responsive element (DRE).


ensembl_gene_id: Q10R45
symbol: Q10R45_ORYSJ
gene_biotype: protein_coding
description:
  Alanine-glyoxylate aminotransferase 2, mitochondrial, putative, expressed; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: Q10R47
symbol: ILI3
gene_biotype: protein_coding
description:
  Transcription factor ILI3; Atypical and probable non DNA-binding bHLH transcription factor that integrates multiple signaling pathways to regulate cell elongation and plant development.


ensembl_gene_id: Q10R54
symbol: SUT1
gene_biotype: protein_coding
description:
  Sucrose transport protein SUT1; Responsible for the transport of sucrose into the cell, with the concomitant uptake of protons (symport system). Can also transport other glucosides such as maltose, salicin, helicin, and alpha- phenylglucoside. Probably required for apoplastic phloem sucrose loading in source tissues (e.g. leaves) in order to transport it to sink tissues (e.g. roots, flowers). Probably not involved in transport of sugars across the symplastic discontinuity between the endosperm and the embryo. Essential for normal pollen germination, but not for pollen maturation or sta [...]


ensembl_gene_id: Q10R93
symbol: RMR1_ORYSJ
gene_biotype: protein_coding
description:
  Receptor homology region, transmembrane domain- and RING domain-containing protein 1; Involved in the trafficking of vacuolar proteins. Functions probably as a sorting receptor for protein trafficking to the protein storage vacuole (PSV) by binding the C-terminal vacuolar sorting determinant (VSD) of vacuolar-sorted proteins.


ensembl_gene_id: Q10RE2
symbol: YUCCA8
gene_biotype: protein_coding
description:
  Indole-3-pyruvate monooxygenase YUCCA8; Involved in auxin biosynthesis. Converts the indole-3-pyruvic acid (IPA) produced by the TAA family to indole-3-acetic acid (IAA). Seems not able to use tryptamine (TAM) as substrate. Probably responsible for auxin biosynthesis in leaves and involved in the regulation of lateral leaf growth. Required for maintaining water homeostasis and an appropriate root to shoot ratio. Required for the inhibition of root growth by ethylene in etiolated seedlings. Functions downstream of the ethylene-response transcription factor EIL1. Belongs to the FMO family.


ensembl_gene_id: Q10RE5
symbol: ARD2
gene_biotype: protein_coding
description:
  1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene); Belongs to the acireductone dioxygenase (ARD) family.


ensembl_gene_id: Q10RI7
symbol: OJ1134F05.6
gene_biotype: protein_coding
description:
  DEAD-box ATP-dependent RNA helicase 38; ATP-dependent RNA helicase essential for mRNA export from the nucleus. Plays an important role in the positive regulation of CBF/DREB transcription factors (By similarity); Belongs to the DEAD box helicase family. DDX19/DBP5 subfamily.


ensembl_gene_id: Q10RK1
symbol: EXPA20
gene_biotype: protein_coding
description:
  Expansin-A20; May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity); Belongs to the expansin family. Expansin A subfamily.


ensembl_gene_id: Q10RP4
symbol: SE14
gene_biotype: protein_coding
description:
  Lysine-specific demethylase SE14; Histone demethylase that demethylates 'Lys-4' (H3K4me) of histone H3. Involved in the control of flowering time. Has a suppressive effect on floral transition under long day conditions through the demethylation of H3K4me3 in the promoter region of the flower-promoting signal HD3B/RFT1.


ensembl_gene_id: Q10RW1
symbol: Q10RW1_ORYSJ
gene_biotype: protein_coding
description:
  Xyloglucan galactosyltransferase KATAMARI 1, putative, expressed; Belongs to the glycosyltransferase 47 family.


ensembl_gene_id: Q10RX7
symbol: ABCC13
gene_biotype: protein_coding
description:
  ABC transporter C family member 13; ABC transporter that may affect phytic acid transport and compartmentalization. May function directly or indirectly in removing phytic acid from the cytosol or in vesicle trafficking. Required for phytic acid accumulation in developing seeds. Phytic acid is the primary storage form of phosphorus in cereal grains and other plant seeds; Belongs to the ABC transporter superfamily. ABCC family. Conjugate transporter (TC 3.A.1.208) subfamily.


ensembl_gene_id: Q10RZ1
symbol: BAMY2
gene_biotype: protein_coding
description:
  Beta-amylase 2, chloroplastic; Possesses beta-amylase activity in vitro. May be involved in cold resistance by mediating the accumulation of maltose upon freezing stress, thus contributing to the protection of membranes (Probable); Belongs to the glycosyl hydrolase 14 family.


ensembl_gene_id: Q10S25
symbol: MRS2-H
gene_biotype: protein_coding
description:
  Putative magnesium transporter MRS2-H; Putative magnesium transporter; Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35.5) family.


ensembl_gene_id: Q10S27
symbol: VDAC6
gene_biotype: protein_coding
description:
  Mitochondrial outer membrane protein porin 6; Forms a channel through the mitochondrial outer membrane that allows diffusion of small hydrophilic molecules. The channel adopts an open conformation at low or zero membrane potential and a closed conformation at potentials above 30-40 mV. The open state has a weak anion selectivity whereas the closed state is cation-selective (By similarity).


ensembl_gene_id: Q10S55
symbol: OJ1006F06.12
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase, chloroplastic; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP); Belongs to the ATP phosphoribosyltransferase family. Long subfamily.


ensembl_gene_id: Q10S65
symbol: NAC022
gene_biotype: protein_coding
description:
  NAC domain-containing protein 22; Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid- mediated signaling.


ensembl_gene_id: Q10S77
symbol: Q10S77_ORYSJ
gene_biotype: protein_coding
description:
  PolyA polymerase family protein, expressed; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: Q10S82
symbol: CATC
gene_biotype: protein_coding
description:
  Catalase isozyme C; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. Responsible for the redox homeostasis in leaves. Prevents nitric oxide (NO) accumulation and subsequent NO-mediated leaf cell death as well as the S-nitrosylation of specific proteins (e.g. glyceraldehyde 3- phosphate dehydrogenase and thioredoxin) by degrading H(2)O(2). Involved in photorespiration. Promotes drought stress tolerance and recovery. Involved in NO-mediated enhanced tolerance to zinc oxide nanoparticles (ZnO NPs)- induced phytot [...]


ensembl_gene_id: Q10S85
symbol: Q10S85_ORYSJ
gene_biotype: protein_coding
description:
  Serine/threonine-protein kinase RLCKVII, putative, expressed; Belongs to the protein kinase superfamily.


ensembl_gene_id: Q10S93
symbol: KAD1_ORYSJ
gene_biotype: protein_coding
description:
  Probable adenylate kinase 1, chloroplastic; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism.


ensembl_gene_id: Q10SC8
symbol: CIPK9
gene_biotype: protein_coding
description:
  CBL-interacting protein kinase 9; CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity); Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.


ensembl_gene_id: Q10SM2
symbol: OsJ_09183
gene_biotype: protein_coding
description:
  Protein-ribulosamine 3-kinase, chloroplastic; Initiates a process leading to the deglycation of proteins. Phosphorylates low-molecular-mass and protein-bound erythrulosamines and ribulosamines, but not fructosamines or psicosamines, on the third carbon of the sugar moiety. Protein-bound erythrulosamine 3-phosphates and ribulosamine 3-phosphates are unstable and decompose under physiological conditions.


ensembl_gene_id: Q10SR3
symbol: Q10SR3_ORYSJ
gene_biotype: protein_coding
description:
  Heat shock 70 kDa protein, mitochondrial, putative, expressed; Belongs to the heat shock protein 70 family.


ensembl_gene_id: Q10ST8
symbol: LTP-2
gene_biotype: protein_coding
description:
  Non-specific lipid-transfer protein 2; Transfer lipids across membranes. May play a role in plant defense or in the biosynthesis of cuticle layers; Belongs to the plant LTP family. B11E subfamily.


ensembl_gene_id: Q10SU1
symbol: Q10SU1_ORYSJ
gene_biotype: protein_coding
description:
  Folylpolyglutamate synthase; Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: Q10SU5
symbol: DRM2
gene_biotype: protein_coding
description:
  DNA (cytosine-5)-methyltransferase DRM2; Involved in de novo DNA methylation. Required for CpG and non-CpG methylation. Required for normal establishment and maintenance of RNA-directed DNA methylation (RdDM) mediated by small interfering RNAs (siRNAs). Regulates proper plant development in both vegetative and reproductive stages through DNA methylation.


ensembl_gene_id: Q10SX6
symbol: ACR2.2
gene_biotype: protein_coding
description:
  Arsenate reductase 2.2; Possesses arsenate reductase activity in vitro. Catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)]. May play a role in arsenic retention in roots.


ensembl_gene_id: Q10SX7
symbol: OsJ_09104
gene_biotype: protein_coding
description:
  Probable glucuronosyltransferase Os03g0107900; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls; Belongs to the glycosyltransferase 47 family.


ensembl_gene_id: Q10SY2
symbol: EL2
gene_biotype: protein_coding
description:
  Cyclin-dependent protein kinase inhibitor EL2; Probable cyclin-dependent protein kinase (CDK) inhibitor that functions as a repressor of mitosis in the endoreduplication cell cycle. May coordinate biotic and abiotic stress perception and cell cycle progression. Inhibits CDKs activity in vitro.


ensembl_gene_id: Q10SY9
symbol: LSI2
gene_biotype: protein_coding
description:
  Silicon efflux transporter LSI2; Silicon efflux transporter involved in silicon transport from the root cells to the apoplast. Is coupled with the silicon influx transporter NIP2-1/LSI1 in both exodermal and endodermal root cells for an efficient silicon transport across the cells into the stele. Silicon is beneficial to plant growth and helps plants to overcome abiotic and biotic stresses by preventing lodging (falling over) and increasing resistance to pests and diseases, as well as other stresses. In the nodes, involved with LSI3 and NIP2-2/LSI6 in silicon intervascular transfer, wh [...]


ensembl_gene_id: Q10T32
symbol: EXPB8
gene_biotype: protein_coding
description:
  Expansin-B8; May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity).


ensembl_gene_id: Q10T38
symbol: Q10T38_ORYSJ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.


ensembl_gene_id: Q10T43
symbol: PSD1
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase proenzyme 1, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily.


ensembl_gene_id: Q10T50
symbol: Q10T50_ORYSJ
gene_biotype: protein_coding
description:
  Hexose carrier protein HEX6, putative, expressed; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: Q2HWG0
symbol: RR13
gene_biotype: protein_coding
description:
  Two-component response regulator ORR13; Functions as response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Type-A response regulators seem to act as negative regulators of the cytokinin signaling. Belongs to the ARR family. Type-A subfamily.


ensembl_gene_id: Q2HWG1
symbol: RR12
gene_biotype: protein_coding
description:
  Two-component response regulator ORR12; Functions as response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Type-A response regulators seem to act as negative regulators of the cytokinin signaling. Belongs to the ARR family. Type-A subfamily.


ensembl_gene_id: Q2HWG4
symbol: RR1
gene_biotype: protein_coding
description:
  Two-component response regulator ORR1; Functions as response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Type-A response regulators seem to act as negative regulators of the cytokinin signaling (By similarity). Involved in adventitious (crown) root initiation under the regulation of CRL5 ; Belongs to the ARR family. Type-A subfamily.


ensembl_gene_id: Q2HWH1
symbol: RR5
gene_biotype: protein_coding
description:
  Two-component response regulator ORR5; Functions as response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Type-A response regulators seem to act as negative regulators of the cytokinin signaling. Belongs to the ARR family. Type-A subfamily.


ensembl_gene_id: Q2QLI6
symbol: MAP70.1
gene_biotype: protein_coding
description:
  Microtubule-associated protein 70-1; Plant-specific protein that interact with microtubules. Belongs to the MAP70 family.


ensembl_gene_id: Q2QLK7
symbol: MED17
gene_biotype: protein_coding
description:
  Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.


ensembl_gene_id: Q2QLL2
symbol: Q2QLL2_ORYSJ
gene_biotype: protein_coding
description:
  Leucine-rich repeat family protein, putative, expressed; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.


ensembl_gene_id: Q2QLT8
symbol: ADF11
gene_biotype: protein_coding
description:
  Actin-depolymerizing factor 11; Actin-depolymerizing protein. Severs actin filaments (F- actin) and binds to actin monomers (By similarity).


ensembl_gene_id: Q2QLV9
symbol: PSY2
gene_biotype: protein_coding
description:
  Phytoene synthase 2, chloroplastic; Catalyzes the conversion of geranylgeranyl diphosphate to phytoene. Mediates the first committed step in carotenoid biosynthesis.


ensembl_gene_id: Q2QLW3
symbol: DOHH2_ORYSJ
gene_biotype: protein_coding
description:
  Deoxyhypusine hydroxylase-B; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family.


ensembl_gene_id: Q2QLY4
symbol: OsJ_36927
gene_biotype: protein_coding
description:
  5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation.


ensembl_gene_id: Q2QLY5
symbol: OsJ_36926
gene_biotype: protein_coding
description:
  5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation.


ensembl_gene_id: Q2QM00
symbol: SPO11-4
gene_biotype: protein_coding
description:
  Meiotic recombination protein SPO11-4; Required for meiotic recombination. Mediates DNA cleavage that forms the double-strand breaks (DSB) that initiate meiotic recombination. Possesses double-stranded DNA cleavage activity in vitro.


ensembl_gene_id: Q2QM47
symbol: BSL2
gene_biotype: protein_coding
description:
  Serine/threonine-protein phosphatase BSL2 homolog; Belongs to the PPP phosphatase family. BSU subfamily.


ensembl_gene_id: Q2QM52
symbol: Q2QM52_ORYSJ
gene_biotype: protein_coding
description:
  Initiation factor 2 subunit family protein, expressed; Belongs to the eIF-2B alpha/beta/delta subunits family.


ensembl_gene_id: Q2QM55
symbol: ODPB3_ORYSJ
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3) (By similarity).


ensembl_gene_id: Q2QM60
symbol: Q2QM60_ORYSJ
gene_biotype: protein_coding
description:
  Ribosomal protein L14 containing protein, expressed; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: Q2QM62
symbol: KIN14R
gene_biotype: protein_coding
description:
  Kinesin-like protein KIN-14R; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-14 subfamily.


ensembl_gene_id: Q2QM69
symbol: OsJ_36874
gene_biotype: protein_coding
description:
  2-methyl-6-phytyl-1,4-hydroquinone methyltransferase 2, chloroplastic; Involved in a key methylation step in both tocopherols (vitamin E) and plastoquinone synthesis. Catalyzes the conversion of 2- methyl-6-phytyl-1,4-hydroquinone (MPBQ) to 2,3-dimethyl-6-phytyl-1,4- hydroquinone (DMPQ, a substrate for tocopherol cyclase), and 2-methyl- 6-solanyl-1,4-benzoquinone (MSBQ) to plastoquinone (By similarity). Belongs to the class I-like SAM-binding methyltransferase superfamily. MPBQ/MBSQ MT family.


ensembl_gene_id: Q2QM77
symbol: PID
gene_biotype: protein_coding
description:
  Protein kinase PINOID; Serine/threonine-protein kinase involved in the regulation of auxin signaling. May control polar auxin transport and probably plays a role in the pattern formation and organogenesis in the rice shoot.


ensembl_gene_id: Q2QM84
symbol: ARF25
gene_biotype: protein_coding
description:
  Auxin response factor 25; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).


ensembl_gene_id: Q2QMB3
symbol: LOL2
gene_biotype: protein_coding
description:
  Protein LOL2; Putative zinc finger that may be involved in programmed cell death and defense response.


ensembl_gene_id: Q2QMG2
symbol: MCCA
gene_biotype: protein_coding
description:
  Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial; Biotin-attachment subunit of the 3-methylcrotonyl-CoA carboxylase, an enzyme that catalyzes the conversion of 3- methylcrotonyl-CoA to 3-methylglutaconyl-CoA, a critical step for leucine and isovaleric acid catabolism.


ensembl_gene_id: Q2QMH1
symbol: NEK2
gene_biotype: protein_coding
description:
  Serine/threonine-protein kinase Nek2; May be involved in plant development processes. Belongs to the protein kinase superfamily. NEK Ser/Thr protein kinase family. NIMA subfamily.


ensembl_gene_id: Q2QMH2
symbol: RHD31_ORYSJ
gene_biotype: protein_coding
description:
  Protein ROOT HAIR DEFECTIVE 3 homolog 1; Probable GTP-binding protein that may be involved in cell development; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily.


ensembl_gene_id: Q2QMI0
symbol: CIPK4
gene_biotype: protein_coding
description:
  CBL-interacting protein kinase 4; CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity); Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.


ensembl_gene_id: Q2QMN7
symbol: UAH
gene_biotype: protein_coding
description:
  Ureidoglycolate hydrolase; Involved in the catabolism of purine nucleotides. The sequential activity of AAH, UGLYAH and UAH allows a complete purine breakdown without the intermediate generation of urea.


ensembl_gene_id: Q2QMW0
symbol: CTU2
gene_biotype: protein_coding
description:
  Cytoplasmic tRNA 2-thiolation protein 2; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with NCS6/CTU1 that ligates sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position.


ensembl_gene_id: Q2QMX9
symbol: ACA10
gene_biotype: protein_coding
description:
  Calcium-transporting ATPase 10, plasma membrane-type; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles.


ensembl_gene_id: Q2QNC3
symbol: MT4C
gene_biotype: protein_coding
description:
  Metallothionein-like protein 4C; Metallothioneins have a high content of cysteine residues that bind various heavy metals (Probable). Acts as reactive oxygen species (ROS) scavenger. Possesses superoxide anion and hydroxyl radical scavenging activities in vitro. Involved in ROS homeostasis during anther and pollen development. Belongs to the metallothionein superfamily. Type 15 family.


ensembl_gene_id: Q2QNE8
symbol: MT4B
gene_biotype: protein_coding
description:
  Metallothionein-like protein 4B; Metallothioneins have a high content of cysteine residues that bind various heavy metals; Belongs to the metallothionein superfamily. Type 15 family.


ensembl_gene_id: Q2QNG7
symbol: ACLA-3
gene_biotype: protein_coding
description:
  ATP-citrate synthase alpha chain protein 3; ATP citrate-lyase is the primary enzyme responsible for the synthesis of cytosolic acetyl-CoA, used for the elongation of fatty acids and biosynthesis of isoprenoids, flavonoids and malonated derivatives. May supply substrate to the cytosolic acetyl-CoA carboxylase, which generates the malonyl-CoA used for the synthesis of a multitude of compounds, including very long chain fatty acids and flavonoids. In contrast to all known animal ACL enzymes having a homomeric structure, plant ACLs are composed of alpha and beta chains (By similarity); Bel [...]


ensembl_gene_id: Q2QNJ8
symbol: Q2QNJ8_ORYSJ
gene_biotype: protein_coding
description:
  Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit alpha family.


ensembl_gene_id: Q2QNK7
symbol: S40A2_ORYSJ
gene_biotype: protein_coding
description:
  Solute carrier family 40 member 2, chloroplastic; May be involved in iron transport and iron homeostasis.


ensembl_gene_id: Q2QNM1
symbol: MCM7
gene_biotype: protein_coding
description:
  DNA replication licensing factor MCM7; Probable component of the MCM2-7 complex (MCM complex) that may function as a DNA helicase and which is essential to undergo a single round of replication initiation and elongation per cell cycle in eukaryotic cells.


ensembl_gene_id: Q2QNM5
symbol: Q2QNM5_ORYSJ
gene_biotype: protein_coding
description:
  GTP-binding protein SAR1A, putative, expressed; Belongs to the small GTPase superfamily. SAR1 family.


ensembl_gene_id: Q2QNS6
symbol: CSLD4
gene_biotype: protein_coding
description:
  Cellulose synthase-like protein D4; Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase-like D subfamily.


ensembl_gene_id: Q2QNU0
symbol: TRS130
gene_biotype: protein_coding
description:
  Trafficking protein particle complex II-specific subunit 130 homolog; Specific subunit of the TRAPP II complex, a highly conserved vesicle tethering complex that is required for the proper transport of proteins in post-Golgi trafficking pathways to the growing cell plate in mitotic active cells.


ensembl_gene_id: Q2QP13
symbol: EXPA26
gene_biotype: protein_coding
description:
  Expansin-A26; May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity).


ensembl_gene_id: Q2QP54
symbol: EFTS
gene_biotype: protein_coding
description:
  Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: Q2QP62
symbol: Q2QP62_ORYSJ
gene_biotype: protein_coding
description:
  Tryptophanyl-tRNA synthetase, putative, expressed; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: Q2QP86
symbol: GRXC15
gene_biotype: protein_coding
description:
  Glutaredoxin-C15; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins (By similarity); Belongs to the glutaredoxin family. CC-type subfamily.


ensembl_gene_id: Q2QPG9
symbol: H2AXB_ORYSJ
gene_biotype: protein_coding
description:
  Probable histone H2AXb; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post- translational modifications of histones, also called histone code, and nucleosome remodeling. Required for checkpoint-mediated arrest of cell cycle progression in response  [...]


ensembl_gene_id: Q2QQ32
symbol: BHLH133
gene_biotype: protein_coding
description:
  Transcription factor BHLH133; Transcription factor that acts as regulator of iron homeostasis. May act as negative regulator of iron transportation from root to shoot. Does not seem to be involved in the suppression of the induction of iron deficiency responsive genes.


ensembl_gene_id: Q2QQ39
symbol: Q2QQ39_ORYSJ
gene_biotype: protein_coding
description:
  Peroxisomal membrane protein 22 kDa, putative, expressed; Belongs to the peroxisomal membrane protein PXMP2/4 family.


ensembl_gene_id: Q2QQ99
symbol: OsJ_36193
gene_biotype: protein_coding
description:
  Protein SPIRAL1-like 3; Acts in maintaining the cortical microtubules organization essential for anisotropic cell growth.


ensembl_gene_id: Q2QQC9
symbol: Q2QQC9_ORYSJ
gene_biotype: protein_coding
description:
  GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.


ensembl_gene_id: Q2QQJ5
symbol: KSL10
gene_biotype: protein_coding
description:
  Ent-sandaracopimara-8(14),15-diene synthase; Involved in oryzalexin phytoalexins biosynthesis. Catalyzes the conversion of ent-copalyl diphosphate to the phytoalexin precursor ent-sandaracopimaradiene.


ensembl_gene_id: Q2QQR2
symbol: CPK27
gene_biotype: protein_coding
description:
  Calcium-dependent protein kinase 27; May play a role in signal transduction pathways that involve calcium as a second messenger; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.


ensembl_gene_id: Q2QQS9
symbol: GCP1
gene_biotype: protein_coding
description:
  Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in mitochondrial tRNAs that read codons beginning with adenine. Probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Involved in mitochondrial genome maintenance.


ensembl_gene_id: Q2QQX6
symbol: ARF24
gene_biotype: protein_coding
description:
  Auxin response factor 24; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).


ensembl_gene_id: Q2QR07
symbol: SWEET13
gene_biotype: protein_coding
description:
  Bidirectional sugar transporter SWEET13; Mediates both low-affinity uptake and efflux of sugar across the plasma membrane.


ensembl_gene_id: Q2QR54
symbol: TDL1A
gene_biotype: protein_coding
description:
  TPD1 protein homolog 1A; Involved in cell specification during anther development. Required for the differentiation of primary parietal cells into secondary parietal cells in anthers. May serve as an extracellular ligand for the MSP1 receptor kinase to limit sporocyte number in ovules.


ensembl_gene_id: Q2QRX6
symbol: DRTS_ORYSJ
gene_biotype: protein_coding
description:
  Putative bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism. Can play two different roles depending on the source of dihydrofolate: de novo synthesis of tetrahydrofolate or recycling of the dihydrofolate released as one of the end products of the TS catalyzed reaction. Catalyzes an essential reaction for de novo glycine and purine synthesis, DNA precursor synthesis, and for the conversion of dUMP to dTMP (By similarity).


ensembl_gene_id: Q2QS13
symbol: UGD5
gene_biotype: protein_coding
description:
  UDP-glucose 6-dehydrogenase 5; Involved in the biosynthesis of UDP-glucuronic acid (UDP- GlcA), providing nucleotide sugars for cell-wall polymers.


ensembl_gene_id: Q2QS14
symbol: UGD4
gene_biotype: protein_coding
description:
  UDP-glucose 6-dehydrogenase 4; Involved in the biosynthesis of UDP-glucuronic acid (UDP- GlcA), providing nucleotide sugars for cell-wall polymers.


ensembl_gene_id: Q2QS38
symbol: Q2QS38_ORYSJ
gene_biotype: protein_coding
description:
  O-methyltransferase ZRP4, putative, expressed; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.


ensembl_gene_id: Q2QS71
symbol: H2A7_ORYSJ
gene_biotype: protein_coding
description:
  Probable histone H2A.7; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.


