# geneInfo

ensembl_gene_id: JDO7802_00006
symbol: bchN
gene_biotype: protein_coding
description:
  Light-independent protochlorophyllide reductase subunit N; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex.


ensembl_gene_id: JDO7802_00008
symbol: bchB
gene_biotype: protein_coding
description:
  Light-independent protochlorophyllide reductase subunit B; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex.


ensembl_gene_id: JDO7802_00010
symbol: bchL
gene_biotype: protein_coding
description:
  Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP.


ensembl_gene_id: JDO7802_00017
symbol: acsF
gene_biotype: protein_coding
description:
  Magnesium-protoporphyrin IX monomethyl ester cyclase; Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME); Belongs to the AcsF family.


ensembl_gene_id: JDO7802_00025
symbol: fitB
gene_biotype: protein_coding
description:
  Putative ribonuclease FitB; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.


ensembl_gene_id: JDO7802_00044
symbol: bchI
gene_biotype: protein_coding
description:
  Magnesium-chelatase 38 kDa subunit; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.


ensembl_gene_id: JDO7802_00058
symbol: pufB
gene_biotype: protein_coding
description:
  Hypothetical protein; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.


ensembl_gene_id: JDO7802_00061
symbol: pufM
gene_biotype: protein_coding
description:
  Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.


ensembl_gene_id: JDO7802_00063
symbol: dxs_1
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: JDO7802_00075
symbol: oxyR_1
gene_biotype: protein_coding
description:
  Morphology and auto-aggregation control protein; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: JDO7802_00108
symbol: efe
gene_biotype: protein_coding
description:
  2-oxoglutarate-dependent ethylene/succinate-forming enzyme; Belongs to the iron/ascorbate-dependent oxidoreductase family.


ensembl_gene_id: JDO7802_00120
symbol: glnD
gene_biotype: protein_coding
description:
  PII uridylyl-transferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.


ensembl_gene_id: JDO7802_00122
symbol: rsmI
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: JDO7802_00128
symbol: cobP
gene_biotype: protein_coding
description:
  Adenosylcobinamide kinase; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate.


ensembl_gene_id: JDO7802_00131
symbol: coaBC
gene_biotype: protein_coding
description:
  DNA/pantothenate metabolism flavoprotein; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: JDO7802_00132
symbol: dut
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: JDO7802_00145
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: JDO7802_00146
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: JDO7802_00148
symbol: rimM
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: JDO7802_00155
symbol: ffh
gene_biotype: protein_coding
description:
  P48; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components; Belongs to the GTP-binding S [...]


ensembl_gene_id: JDO7802_00156
symbol: azoR
gene_biotype: protein_coding
description:
  FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.


ensembl_gene_id: JDO7802_00160
symbol: nrdZ
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase NrdZ; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: JDO7802_00166
symbol: CTQ48164.1
gene_biotype: protein_coding
description:
  Putative protein involved in cation transport; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.


ensembl_gene_id: JDO7802_00171
symbol: hisC2
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase 2; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: JDO7802_00172
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: JDO7802_00174
symbol: tal
gene_biotype: protein_coding
description:
  Putative transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: JDO7802_00176
symbol: xerC_1
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: JDO7802_00178
symbol: otsB
gene_biotype: protein_coding
description:
  Trehalose-6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.


ensembl_gene_id: JDO7802_00190
symbol: gloB
gene_biotype: protein_coding
description:
  Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.


ensembl_gene_id: JDO7802_00194
symbol: atpH
gene_biotype: protein_coding
description:
  F-type ATPase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: JDO7802_00195
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: JDO7802_00196
symbol: atpG_1
gene_biotype: protein_coding
description:
  F-ATPase gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: JDO7802_00197
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: JDO7802_00198
symbol: atpC
gene_biotype: protein_coding
description:
  F-ATPase epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: JDO7802_00200
symbol: gap_1
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: JDO7802_00232
symbol: slcC
gene_biotype: protein_coding
description:
  (S)-sulfolactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: JDO7802_00237
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: JDO7802_00250
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: JDO7802_00254
symbol: ctaC
gene_biotype: protein_coding
description:
  Cytochrome c oxidase subunit 2 precursor; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).


ensembl_gene_id: JDO7802_00255
symbol: ctaB
gene_biotype: protein_coding
description:
  Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily.


ensembl_gene_id: JDO7802_00257
symbol: ctaG
gene_biotype: protein_coding
description:
  Cytochrome c oxidase assembly protein CtaG; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family.


ensembl_gene_id: JDO7802_00267
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: JDO7802_00269
symbol: mtnP
gene_biotype: protein_coding
description:
  S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily.


ensembl_gene_id: JDO7802_00278
symbol: atpI
gene_biotype: protein_coding
description:
  ATP synthase protein I; A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex.


ensembl_gene_id: JDO7802_00279
symbol: atpB
gene_biotype: protein_coding
description:
  F-ATPase subunit 6; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: JDO7802_00280
symbol: atpE
gene_biotype: protein_coding
description:
  Lipid-binding protein; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: JDO7802_00281
symbol: atpG_2
gene_biotype: protein_coding
description:
  F-type ATPase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: JDO7802_00302
symbol: lepA
gene_biotype: protein_coding
description:
  Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: JDO7802_00343
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: JDO7802_00346
symbol: pheS
gene_biotype: protein_coding
description:
  Phenylalanine--tRNA ligase alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: JDO7802_00348
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: JDO7802_00350
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: JDO7802_00354
symbol: lspA
gene_biotype: protein_coding
description:
  Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: JDO7802_00357
symbol: rsmB_1
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase B; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: JDO7802_00360
symbol: dapB
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: JDO7802_00361
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: JDO7802_00362
symbol: CTQ48360.1
gene_biotype: protein_coding
description:
  Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase.


ensembl_gene_id: JDO7802_00363
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: JDO7802_00368
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: JDO7802_00371
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: JDO7802_00375
symbol: mscL
gene_biotype: protein_coding
description:
  Large-conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: JDO7802_00384
symbol: mobA_1
gene_biotype: protein_coding
description:
  Molybdenum cofactor guanylyltransferase; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.


ensembl_gene_id: JDO7802_00386
symbol: moeA_1
gene_biotype: protein_coding
description:
  Molybdopterin molybdenumtransferase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: JDO7802_00390
symbol: fabA
gene_biotype: protein_coding
description:
  3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length.


ensembl_gene_id: JDO7802_00391
symbol: fabB
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase 1; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: JDO7802_00408
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: JDO7802_00411
symbol: clpS
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease adapter protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: JDO7802_00413
symbol: serS
gene_biotype: protein_coding
description:
  Serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: JDO7802_00414
symbol: yajC
gene_biotype: protein_coding
description:
  Preprotein translocase subunit YajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.


ensembl_gene_id: JDO7802_00415
symbol: secD
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: JDO7802_00416
symbol: secF
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: JDO7802_00422
symbol: thyX
gene_biotype: protein_coding
description:
  Thymidylate synthase ThyX; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: JDO7802_00435
symbol: rlmJ
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase J; Specifically methylates the adenine in position 2030 of 23S rRNA.


ensembl_gene_id: JDO7802_00438
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: JDO7802_00439
symbol: secG
gene_biotype: protein_coding
description:
  Preprotein translocase band 1 subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: JDO7802_00440
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: JDO7802_00444
symbol: rpiA
gene_biotype: protein_coding
description:
  Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.


ensembl_gene_id: JDO7802_00460
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.


ensembl_gene_id: JDO7802_00465
symbol: yciB
gene_biotype: protein_coding
description:
  Intracellular septation protein; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.


ensembl_gene_id: JDO7802_00466
symbol: rluB
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: JDO7802_00467
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: JDO7802_00484
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.


ensembl_gene_id: JDO7802_00498
symbol: rimN
gene_biotype: protein_coding
description:
  t(6)A37 threonylcarbamoyladenosine biosynthesis protein RimN; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: JDO7802_00502
symbol: gph_1
gene_biotype: protein_coding
description:
  Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.


ensembl_gene_id: JDO7802_00508
symbol: glpD
gene_biotype: protein_coding
description:
  Aerobic glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: JDO7802_00511
symbol: CTQ48509.1
gene_biotype: protein_coding
description:
  Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: JDO7802_00518
symbol: rbsK_2
gene_biotype: protein_coding
description:
  Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.


ensembl_gene_id: JDO7802_00524
symbol: rbsC_1
gene_biotype: protein_coding
description:
  Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: JDO7802_00535
symbol: cnrB
gene_biotype: protein_coding
description:
  Nickel and cobalt resistance protein CnrB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: JDO7802_00536
symbol: czcA_1
gene_biotype: protein_coding
description:
  Cation efflux system protein CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: JDO7802_00538
symbol: mexA
gene_biotype: protein_coding
description:
  Multidrug resistance protein MexA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: JDO7802_00556
symbol: CTQ48554.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family.


ensembl_gene_id: JDO7802_00576
symbol: ychF
gene_biotype: protein_coding
description:
  Ribosome-binding ATPase YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: JDO7802_00586
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: JDO7802_00597
symbol: cobQ
gene_biotype: protein_coding
description:
  Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: JDO7802_00603
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: JDO7802_00605
symbol: CTQ48601.1
gene_biotype: protein_coding
description:
  Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.


ensembl_gene_id: JDO7802_00607
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: JDO7802_00621
symbol: rluD
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: JDO7802_00622
symbol: rpoH_2
gene_biotype: protein_coding
description:
  RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.


ensembl_gene_id: JDO7802_00628
symbol: rplY
gene_biotype: protein_coding
description:
  General stress protein CTC; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: JDO7802_00638
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: JDO7802_00662
symbol: purE
gene_biotype: protein_coding
description:
  N5-carboxyaminoimidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: JDO7802_00663
symbol: purK
gene_biotype: protein_coding
description:
  N5-carboxyaminoimidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: JDO7802_00665
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: JDO7802_00667
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: JDO7802_00676
symbol: rpsA
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.


ensembl_gene_id: JDO7802_00677
symbol: ihfB
gene_biotype: protein_coding
description:
  Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: JDO7802_00680
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: JDO7802_00685
symbol: pth
gene_biotype: protein_coding
description:
  Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: JDO7802_00696
symbol: nadE_1
gene_biotype: protein_coding
description:
  Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: JDO7802_00702
symbol: leuA_1
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: JDO7802_00708
symbol: mrdB
gene_biotype: protein_coding
description:
  Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: JDO7802_00719
symbol: aspS
gene_biotype: protein_coding
description:
  Aspartate--tRNA ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: JDO7802_00727
symbol: gatA_2
gene_biotype: protein_coding
description:
  Glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: JDO7802_00728
symbol: gatC
gene_biotype: protein_coding
description:
  Glutamyl-tRNA(Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: JDO7802_00741
symbol: aat
gene_biotype: protein_coding
description:
  Leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: JDO7802_00743
symbol: accC
gene_biotype: protein_coding
description:
  Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: JDO7802_00744
symbol: accB
gene_biotype: protein_coding
description:
  Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: JDO7802_00747
symbol: acsA_1
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: JDO7802_00814
symbol: ugpC_1
gene_biotype: protein_coding
description:
  Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.


ensembl_gene_id: JDO7802_00829
symbol: pucM
gene_biotype: protein_coding
description:
  5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.


ensembl_gene_id: JDO7802_00831
symbol: fabG_3
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase FabG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: JDO7802_00836
symbol: rlmB
gene_biotype: protein_coding
description:
  23S rRNA (guanosine-2'-O-)-methyltransferase RlmB; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: JDO7802_00841
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: JDO7802_00844
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.


ensembl_gene_id: JDO7802_00846
symbol: hisH1
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisH 1; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: JDO7802_00851
symbol: cfiB
gene_biotype: protein_coding
description:
  2-oxoglutarate carboxylase small subunit; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.


ensembl_gene_id: JDO7802_00857
symbol: CTQ48849.1
gene_biotype: protein_coding
description:
  Antiporter inner membrane protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: JDO7802_00859
symbol: rsmH
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: JDO7802_00862
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: JDO7802_00863
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: JDO7802_00864
symbol: mraY
gene_biotype: protein_coding
description:
  Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: JDO7802_00866
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: JDO7802_00880
symbol: dksA
gene_biotype: protein_coding
description:
  DnaK suppressor protein; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.


ensembl_gene_id: JDO7802_00891
symbol: yedZ
gene_biotype: protein_coding
description:
  Flavocytochrome YedZ; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the [...]


ensembl_gene_id: JDO7802_00894
symbol: clpB
gene_biotype: protein_coding
description:
  Chaperone protein ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: JDO7802_00898
symbol: ahcY
gene_biotype: protein_coding
description:
  Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: JDO7802_00927
symbol: CTQ48919.1
gene_biotype: protein_coding
description:
  Putative peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.


ensembl_gene_id: JDO7802_00933
symbol: dapE_1
gene_biotype: protein_coding
description:
  Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.


ensembl_gene_id: JDO7802_00938
symbol: dapD
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family.


ensembl_gene_id: JDO7802_00949
symbol: ubiG_1
gene_biotype: protein_coding
description:
  3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway. Belongs to the methyltransferase superfamily. UbiG/COQ3 family.


ensembl_gene_id: JDO7802_00956
symbol: asd2
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase 2; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: JDO7802_00960
symbol: cynT
gene_biotype: protein_coding
description:
  Carbonic anhydrase 1; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.


ensembl_gene_id: JDO7802_00965
symbol: murJ
gene_biotype: protein_coding
description:
  Putative peptidoglycan biosynthesis protein MurJ; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: JDO7802_00967
symbol: trpS
gene_biotype: protein_coding
description:
  Tryptophan--tRNA ligase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: JDO7802_00984
symbol: CTQ48976.1
gene_biotype: protein_coding
description:
  L-arabinose transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: JDO7802_00985
symbol: punA
gene_biotype: protein_coding
description:
  Purine nucleoside phosphorylase 1; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: JDO7802_01000
symbol: sdhB
gene_biotype: protein_coding
description:
  Succinate dehydrogenase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.


ensembl_gene_id: JDO7802_01006
symbol: sdhA
gene_biotype: protein_coding
description:
  Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.


ensembl_gene_id: JDO7802_01016
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.


ensembl_gene_id: JDO7802_01018
symbol: sucC
gene_biotype: protein_coding
description:
  Succinyl-CoA ligase [ADP-forming] subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: JDO7802_01022
symbol: sucD
gene_biotype: protein_coding
description:
  Succinyl-CoA ligase [ADP-forming] subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: JDO7802_01028
symbol: sucB
gene_biotype: protein_coding
description:
  Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: JDO7802_01052
symbol: rluE
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase E; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: JDO7802_01054
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: JDO7802_01066
symbol: xylH
gene_biotype: protein_coding
description:
  Xylose transport system permease protein XylH; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: JDO7802_01079
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: JDO7802_01084
symbol: trmL
gene_biotype: protein_coding
description:
  Putative tRNA (cytidine(34)-2'-O)-methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.


ensembl_gene_id: JDO7802_01087
symbol: nadD
gene_biotype: protein_coding
description:
  Putative nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: JDO7802_01093
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP precursor; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: JDO7802_01096
symbol: fliF
gene_biotype: protein_coding
description:
  Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: JDO7802_01097
symbol: CTQ49087.1
gene_biotype: protein_coding
description:
  Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: JDO7802_01107
symbol: flgH
gene_biotype: protein_coding
description:
  Basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: JDO7802_01108
symbol: CTQ49098.1
gene_biotype: protein_coding
description:
  Flagellar basal body P-ring biosynthesis protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.


ensembl_gene_id: JDO7802_01122
symbol: putA
gene_biotype: protein_coding
description:
  Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: JDO7802_01128
symbol: ddpF
gene_biotype: protein_coding
description:
  Putative D,D-dipeptide transport ATP-binding protein DdpF; Belongs to the ABC transporter superfamily.


ensembl_gene_id: JDO7802_01138
symbol: betA
gene_biotype: protein_coding
description:
  Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.


ensembl_gene_id: JDO7802_01140
symbol: betB_2
gene_biotype: protein_coding
description:
  Betaine aldehyde dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid.


ensembl_gene_id: JDO7802_01154
symbol: leuB_1
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: JDO7802_01157
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: JDO7802_01161
symbol: adeC
gene_biotype: protein_coding
description:
  Adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.


ensembl_gene_id: JDO7802_01162
symbol: amn
gene_biotype: protein_coding
description:
  AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations.


ensembl_gene_id: JDO7802_01164
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: JDO7802_01169
symbol: thiQ
gene_biotype: protein_coding
description:
  Thiamine import ATP-binding protein ThiQ; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family.


ensembl_gene_id: JDO7802_01172
symbol: idi
gene_biotype: protein_coding
description:
  Isopentenyl-diphosphate Delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).


ensembl_gene_id: JDO7802_01173
symbol: hslV
gene_biotype: protein_coding
description:
  ATP-dependent protease subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: JDO7802_01176
symbol: hslU
gene_biotype: protein_coding
description:
  Unfoldase HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: JDO7802_01182
symbol: secB
gene_biotype: protein_coding
description:
  Protein-export protein SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.


ensembl_gene_id: JDO7802_01183
symbol: dnaQ
gene_biotype: protein_coding
description:
  DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.


ensembl_gene_id: JDO7802_01184
symbol: coaE
gene_biotype: protein_coding
description:
  Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: JDO7802_01185
symbol: aroE_1
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: JDO7802_01186
symbol: yceF
gene_biotype: protein_coding
description:
  Maf-like protein YceF; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: JDO7802_01188
symbol: rho
gene_biotype: protein_coding
description:
  Hypothetical protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: JDO7802_01189
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase MnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: JDO7802_01190
symbol: mnmG
gene_biotype: protein_coding
description:
  Glucose-inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: JDO7802_01191
symbol: rsmG
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.


ensembl_gene_id: JDO7802_01194
symbol: hemN_1
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen-III oxidase 1; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: JDO7802_01196
symbol: CTQ49185.1
gene_biotype: protein_coding
description:
  Non-canonical purine NTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: JDO7802_01197
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: JDO7802_01198
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: JDO7802_01199
symbol: grpE
gene_biotype: protein_coding
description:
  HSP-70 cofactor; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependen [...]


ensembl_gene_id: JDO7802_01200
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: JDO7802_01203
symbol: dnaJ
gene_biotype: protein_coding
description:
  Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]


ensembl_gene_id: JDO7802_01208
symbol: cysQ
gene_biotype: protein_coding
description:
  3'(2'),5'-bisphosphate nucleotidase CysQ; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.


ensembl_gene_id: JDO7802_01215
symbol: yvyD
gene_biotype: protein_coding
description:
  SigL modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: JDO7802_01223
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: JDO7802_01227
symbol: pbpG_2
gene_biotype: protein_coding
description:
  Penicillin-binding protein 2D; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.


ensembl_gene_id: JDO7802_01258
symbol: kduI
gene_biotype: protein_coding
description:
  4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.


ensembl_gene_id: JDO7802_01273
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: JDO7802_01280
symbol: petA
gene_biotype: protein_coding
description:
  Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: JDO7802_01281
symbol: petB
gene_biotype: protein_coding
description:
  Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: JDO7802_01284
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: JDO7802_01287
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: JDO7802_01290
symbol: flhA_2
gene_biotype: protein_coding
description:
  S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.


ensembl_gene_id: JDO7802_01296
symbol: grxC
gene_biotype: protein_coding
description:
  Glutaredoxin-3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.


ensembl_gene_id: JDO7802_01299
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: JDO7802_01302
symbol: argJ
gene_biotype: protein_coding
description:
  Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: JDO7802_01304
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family.


ensembl_gene_id: JDO7802_01305
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: JDO7802_01308
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: JDO7802_01309
symbol: rlmH
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: JDO7802_01310
symbol: gpmI
gene_biotype: protein_coding
description:
  2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: JDO7802_01313
symbol: rppH
gene_biotype: protein_coding
description:
  RNA pyrophosphohydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.


ensembl_gene_id: JDO7802_01319
symbol: accD
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: JDO7802_01326
symbol: CTQ49313.1
gene_biotype: protein_coding
description:
  Putative peroxidase-related enzyme; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: JDO7802_01330
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: JDO7802_01340
symbol: ubiG_2
gene_biotype: protein_coding
description:
  3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.


ensembl_gene_id: JDO7802_01372
symbol: lpxK
gene_biotype: protein_coding
description:
  Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: JDO7802_01373
symbol: waaA
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonic acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: JDO7802_01378
symbol: xecD
gene_biotype: protein_coding
description:
  2-(R)-hydroxypropyl-CoM dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: JDO7802_01382
symbol: lolA
gene_biotype: protein_coding
description:
  Outer-membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: JDO7802_01399
symbol: ribA
gene_biotype: protein_coding
description:
  GTP cyclohydrolase-2; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: JDO7802_01401
symbol: CTQ49388.1
gene_biotype: protein_coding
description:
  Pyridoxal phosphate enzyme, YggS family; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: JDO7802_01415
symbol: msrA_1
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: JDO7802_01420
symbol: ilvA
gene_biotype: protein_coding
description:
  L-threonine dehydratase biosynthetic IlvA; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: JDO7802_01424
symbol: hslO
gene_biotype: protein_coding
description:
  Heat shock protein 33; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress; Belongs to the HSP33 family.


ensembl_gene_id: JDO7802_01430
symbol: rlmD
gene_biotype: protein_coding
description:
  23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: JDO7802_01439
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease 7 small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: JDO7802_01443
symbol: ilvE_3
gene_biotype: protein_coding
description:
  Branched-chain-amino-acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: JDO7802_01451
symbol: serA_1
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: JDO7802_01504
symbol: glgB
gene_biotype: protein_coding
description:
  1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: JDO7802_01505
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: JDO7802_01516
symbol: fixN
gene_biotype: protein_coding
description:
  Hypothetical protein; Cytochrome c oxidase subunit 1 homolog, bacteroid; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: JDO7802_01519
symbol: hemN_2
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen-III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: JDO7802_01522
symbol: znuC
gene_biotype: protein_coding
description:
  Zinc import ATP-binding protein ZnuC; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.


ensembl_gene_id: JDO7802_01527
symbol: dnaE2
gene_biotype: protein_coding
description:
  Error-prone DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.


ensembl_gene_id: JDO7802_01530
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: JDO7802_01531
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: JDO7802_01532
symbol: dnaN
gene_biotype: protein_coding
description:
  DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of  [...]


ensembl_gene_id: JDO7802_01533
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: JDO7802_01537
symbol: mutM_2
gene_biotype: protein_coding
description:
  Formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: JDO7802_01538
symbol: ubiE
gene_biotype: protein_coding
description:
  Ubiquinone/menaquinone biosynthesis methyltransferase ubiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).


ensembl_gene_id: JDO7802_01539
symbol: ubiB_2
gene_biotype: protein_coding
description:
  Putative ubiquinone biosynthesis protein UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily.


ensembl_gene_id: JDO7802_01540
symbol: flgD
gene_biotype: protein_coding
description:
  Basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.


ensembl_gene_id: JDO7802_01549
symbol: rlmN
gene_biotype: protein_coding
description:
  Dual-specificity RNA methyltransferase RlmN; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: JDO7802_01551
symbol: serC
gene_biotype: protein_coding
description:
  Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.


ensembl_gene_id: JDO7802_01561
symbol: pheT
gene_biotype: protein_coding
description:
  Phenylalanine--tRNA ligase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: JDO7802_01568
symbol: CTQ49554.1
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: JDO7802_01590
symbol: CTQ49576.1
gene_biotype: protein_coding
description:
  ABC-type uncharacterized transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: JDO7802_01593
symbol: CTQ49579.1
gene_biotype: protein_coding
description:
  Urea ABC transporter, permease protein UrtB; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: JDO7802_01602
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity.


ensembl_gene_id: JDO7802_01608
symbol: nth_1
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: JDO7802_01618
symbol: nodM
gene_biotype: protein_coding
description:
  Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: JDO7802_01619
symbol: glmU_2
gene_biotype: protein_coding
description:
  Bifunctional protein GlmU; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: JDO7802_01637
symbol: ndhC
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase subunit 3; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: JDO7802_01639
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: JDO7802_01640
symbol: nqo5
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase chain 5; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: JDO7802_01641
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: JDO7802_01645
symbol: nqo1_2
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase chain 1; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.


ensembl_gene_id: JDO7802_01651
symbol: nqo3
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase chain 3; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.


ensembl_gene_id: JDO7802_01653
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: JDO7802_01654
symbol: nuoI
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: JDO7802_01656
symbol: nuoJ
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: JDO7802_01657
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: JDO7802_01660
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: JDO7802_01662
symbol: coaX
gene_biotype: protein_coding
description:
  Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: JDO7802_01683
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: JDO7802_01688
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: JDO7802_01691
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: JDO7802_01692
symbol: gcp
gene_biotype: protein_coding
description:
  t(6)A37 threonylcarbamoyladenosine biosynthesis protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: JDO7802_01693
symbol: CTQ49678.1
gene_biotype: protein_coding
description:
  uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: JDO7802_01716
symbol: flgI
gene_biotype: protein_coding
description:
  Basal body P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: JDO7802_01720
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: JDO7802_01721
symbol: pgsA
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: JDO7802_01751
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate.


ensembl_gene_id: JDO7802_01757
symbol: metF
gene_biotype: protein_coding
description:
  5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: JDO7802_01765
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: JDO7802_01767
symbol: gcvP
gene_biotype: protein_coding
description:
  Glycine dehydrogenase [decarboxylating]; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.


ensembl_gene_id: JDO7802_01785
symbol: ribBA
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.


ensembl_gene_id: JDO7802_01786
symbol: ribH1
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase 1; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: JDO7802_01788
symbol: nusB
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: JDO7802_01789
symbol: mdtF
gene_biotype: protein_coding
description:
  Multidrug resistance protein MdtF; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: JDO7802_01791
symbol: moaB
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein B; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family.


ensembl_gene_id: JDO7802_01797
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: JDO7802_01800
symbol: plsY
gene_biotype: protein_coding
description:
  G3P acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: JDO7802_01804
symbol: gshA
gene_biotype: protein_coding
description:
  Glutamate--cysteine ligase GshA; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). Belongs to the glutamate--cysteine ligase type 2 family. EgtA subfamily.


ensembl_gene_id: JDO7802_01807
symbol: rsmE
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: JDO7802_01808
symbol: ubiA
gene_biotype: protein_coding
description:
  4-hydroxybenzoate octaprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.


ensembl_gene_id: JDO7802_01815
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: JDO7802_01816
symbol: ybaB_1
gene_biotype: protein_coding
description:
  Nucleoid-associated protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: JDO7802_01818
symbol: dnaX_1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: JDO7802_01838
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: JDO7802_01839
symbol: hemC
gene_biotype: protein_coding
description:
  Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: JDO7802_01840
symbol: gndA
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.


ensembl_gene_id: JDO7802_01850
symbol: pncB
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.


ensembl_gene_id: JDO7802_01855
symbol: yhhQ
gene_biotype: protein_coding
description:
  Inner membrane protein YhhQ; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: JDO7802_01860
symbol: dapA
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: JDO7802_01862
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: JDO7802_01868
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: JDO7802_01874
symbol: ileS
gene_biotype: protein_coding
description:
  Isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: JDO7802_01878
symbol: cobO
gene_biotype: protein_coding
description:
  Cob(I)yrinic acid a,c-diamide adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.


ensembl_gene_id: JDO7802_01884
symbol: psuG
gene_biotype: protein_coding
description:
  Pseudouridine-5'-phosphate glycosidase; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family.


ensembl_gene_id: JDO7802_01888
symbol: smc
gene_biotype: protein_coding
description:
  Chromosome partition protein Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: JDO7802_01891
symbol: cobD-2
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: JDO7802_01897
symbol: greA
gene_biotype: protein_coding
description:
  Transcript cleavage factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: JDO7802_01905
symbol: accA
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: JDO7802_01911
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: JDO7802_01913
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: JDO7802_01914
symbol: CTQ49897.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol-serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: JDO7802_01919
symbol: argF_1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: JDO7802_01920
symbol: aruC
gene_biotype: protein_coding
description:
  Succinylornithine transaminase/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: JDO7802_01922
symbol: pcs
gene_biotype: protein_coding
description:
  Phosphatidylcholine synthase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: JDO7802_01926
symbol: cobS_1
gene_biotype: protein_coding
description:
  Cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: JDO7802_01927
symbol: cobU
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: JDO7802_01930
symbol: rsgA
gene_biotype: protein_coding
description:
  Putative ribosome biogenesis GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: JDO7802_01932
symbol: folD
gene_biotype: protein_coding
description:
  Bifunctional protein FolD protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: JDO7802_01936
symbol: ftsH_1
gene_biotype: protein_coding
description:
  ATP-dependent zinc metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: JDO7802_01937
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: JDO7802_01938
symbol: cpoB
gene_biotype: protein_coding
description:
  Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.


ensembl_gene_id: JDO7802_01939
symbol: pal
gene_biotype: protein_coding
description:
  Minor outer membrane protein Omp16; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: JDO7802_01940
symbol: tolB
gene_biotype: protein_coding
description:
  Translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: JDO7802_01943
symbol: exbB
gene_biotype: protein_coding
description:
  Biopolymer transport protein ExbB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: JDO7802_01949
symbol: ruvC
gene_biotype: protein_coding
description:
  Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: JDO7802_01950
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: JDO7802_01951
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: JDO7802_01954
symbol: mfd_1
gene_biotype: protein_coding
description:
  Transcription-repair-coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: JDO7802_01964
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: JDO7802_01987
symbol: glyA1
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase 1; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: JDO7802_01988
symbol: ppnK
gene_biotype: protein_coding
description:
  Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: JDO7802_01990
symbol: metG_2
gene_biotype: protein_coding
description:
  Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: JDO7802_01996
symbol: miaB
gene_biotype: protein_coding
description:
  (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: JDO7802_02001
symbol: ybeY
gene_biotype: protein_coding
description:
  Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: JDO7802_02003
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: JDO7802_02004
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: JDO7802_02005
symbol: ribD
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: JDO7802_02006
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: JDO7802_02012
symbol: rpoD
gene_biotype: protein_coding
description:
  Sigma-70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: JDO7802_02013
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: JDO7802_02024
symbol: CTQ50007.1
gene_biotype: protein_coding
description:
  Putative periplasmic iron-binding protein precursor; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: JDO7802_02025
symbol: pntB
gene_biotype: protein_coding
description:
  NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.


ensembl_gene_id: JDO7802_02026
symbol: pntA
gene_biotype: protein_coding
description:
  NAD(P) transhydrogenase subunit alpha; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the AlaDH/PNT family.


ensembl_gene_id: JDO7802_02029
symbol: argB
gene_biotype: protein_coding
description:
  Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: JDO7802_02030
symbol: engB
gene_biotype: protein_coding
description:
  Putative GTP-binding protein EngB; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: JDO7802_02032
symbol: yidC
gene_biotype: protein_coding
description:
  Oxa1Ec; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: JDO7802_02034
symbol: ttcA
gene_biotype: protein_coding
description:
  tRNA 2-thiocytidine biosynthesis protein TtcA; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.


ensembl_gene_id: JDO7802_02036
symbol: yidD
gene_biotype: protein_coding
description:
  Putative membrane protein insertion efficiency factor; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: JDO7802_02037
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: JDO7802_02044
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: JDO7802_02052
symbol: def_1
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: JDO7802_02054
symbol: def_3
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. Belongs to the polypeptide deformylase family.


ensembl_gene_id: JDO7802_02055
symbol: fmt
gene_biotype: protein_coding
description:
  Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: JDO7802_02058
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: JDO7802_02068
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: JDO7802_02069
symbol: rsh
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase rsh; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: JDO7802_02071
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: JDO7802_02073
symbol: acpS
gene_biotype: protein_coding
description:
  Holo-[acyl-carrier-protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: JDO7802_02075
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: JDO7802_02076
symbol: era
gene_biotype: protein_coding
description:
  Bex protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: JDO7802_02084
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase [ATP]; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.


ensembl_gene_id: JDO7802_02097
symbol: CTQ50079.1
gene_biotype: protein_coding
description:
  Cob(I)yrinic acid a,c-diamide adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.


ensembl_gene_id: JDO7802_02099
symbol: bdhA_2
gene_biotype: protein_coding
description:
  D-beta-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: JDO7802_02101
symbol: parC
gene_biotype: protein_coding
description:
  DNA topoisomerase 4 subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.


ensembl_gene_id: JDO7802_02103
symbol: tufA
gene_biotype: protein_coding
description:
  Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: JDO7802_02105
symbol: rpsJ
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: JDO7802_02106
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.


ensembl_gene_id: JDO7802_02108
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: JDO7802_02110
symbol: rplB
gene_biotype: protein_coding
description:
  Hypothetical protein; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: JDO7802_02111
symbol: rpsS
gene_biotype: protein_coding
description:
  Hypothetical protein; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: JDO7802_02112
symbol: rplV
gene_biotype: protein_coding
description:
  Hypothetical protein; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: JDO7802_02113
symbol: rpsC
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: JDO7802_02114
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: JDO7802_02119
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: JDO7802_02120
symbol: rplN
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: JDO7802_02121
symbol: rplX
gene_biotype: protein_coding
description:
  Hypothetical protein; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: JDO7802_02122
symbol: rplE
gene_biotype: protein_coding
description:
  Hypothetical protein; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: JDO7802_02123
symbol: rpsN
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.


ensembl_gene_id: JDO7802_02124
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: JDO7802_02125
symbol: rplF
gene_biotype: protein_coding
description:
  Hypothetical protein; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: JDO7802_02126
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: JDO7802_02127
symbol: rpsE
gene_biotype: protein_coding
description:
  Hypothetical protein; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: JDO7802_02130
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: JDO7802_02131
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: JDO7802_02132
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: JDO7802_02133
symbol: rpsM
gene_biotype: protein_coding
description:
  Hypothetical protein; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: JDO7802_02134
symbol: rpsK
gene_biotype: protein_coding
description:
  Hypothetical protein; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: JDO7802_02135
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: JDO7802_02140
symbol: crcB
gene_biotype: protein_coding
description:
  Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: JDO7802_02141
symbol: rluC
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase C; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: JDO7802_02156
symbol: CTQ50138.1
gene_biotype: protein_coding
description:
  Omega-amino acid--pyruvate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: JDO7802_02162
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: JDO7802_02163
symbol: speH
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase proenzyme precursor; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine.


ensembl_gene_id: JDO7802_02164
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: JDO7802_02175
symbol: metZ
gene_biotype: protein_coding
description:
  O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.


ensembl_gene_id: JDO7802_02180
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: JDO7802_02181
symbol: folP
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: JDO7802_02190
symbol: trkH
gene_biotype: protein_coding
description:
  Trk system potassium uptake protein TrkH; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.


ensembl_gene_id: JDO7802_02196
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: JDO7802_02210
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: JDO7802_02213
symbol: proS
gene_biotype: protein_coding
description:
  Proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro); Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 2 subfamily.


ensembl_gene_id: JDO7802_02215
symbol: lolD_2
gene_biotype: protein_coding
description:
  Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.


ensembl_gene_id: JDO7802_02221
symbol: fdxA_1
gene_biotype: protein_coding
description:
  Ferredoxin II; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: JDO7802_02225
symbol: CTQ50207.1
gene_biotype: protein_coding
description:
  5-formyltetrahydrofolate cyclo-ligase family protein; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.


ensembl_gene_id: JDO7802_02232
symbol: CTQ50214.1
gene_biotype: protein_coding
description:
  TRAP transporter solute receptor, DctP family; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.


ensembl_gene_id: JDO7802_02237
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: JDO7802_02239
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: JDO7802_02240
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: JDO7802_02241
symbol: rplJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: JDO7802_02242
symbol: rplL
gene_biotype: protein_coding
description:
  50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: JDO7802_02243
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: JDO7802_02249
symbol: rpsL
gene_biotype: protein_coding
description:
  Hypothetical protein; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: JDO7802_02250
symbol: rpsG
gene_biotype: protein_coding
description:
  Hypothetical protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: JDO7802_02251
symbol: fusA
gene_biotype: protein_coding
description:
  Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: JDO7802_02254
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: JDO7802_02258
symbol: ddlB
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase B; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: JDO7802_02259
symbol: ftsQ
gene_biotype: protein_coding
description:
  Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.


ensembl_gene_id: JDO7802_02260
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: JDO7802_02261
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: JDO7802_02262
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: JDO7802_02263
symbol: bamD
gene_biotype: protein_coding
description:
  Competence lipoprotein ComL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: JDO7802_02266
symbol: guaD
gene_biotype: protein_coding
description:
  Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.


ensembl_gene_id: JDO7802_02271
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: JDO7802_02272
symbol: prmC
gene_biotype: protein_coding
description:
  Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: JDO7802_02274
symbol: rsmA
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: JDO7802_02275
symbol: pdxA1
gene_biotype: protein_coding
description:
  4-hydroxythreonine-4-phosphate dehydrogenase 1; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).


ensembl_gene_id: JDO7802_02277
symbol: lptD
gene_biotype: protein_coding
description:
  Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.


ensembl_gene_id: JDO7802_02280
symbol: pepA
gene_biotype: protein_coding
description:
  Cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: JDO7802_02285
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: JDO7802_02292
symbol: scpA_2
gene_biotype: protein_coding
description:
  Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: JDO7802_02293
symbol: scpB
gene_biotype: protein_coding
description:
  Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: JDO7802_02299
symbol: pxpA
gene_biotype: protein_coding
description:
  LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.


ensembl_gene_id: JDO7802_02305
symbol: groS
gene_biotype: protein_coding
description:
  Co-chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: JDO7802_02306
symbol: groL
gene_biotype: protein_coding
description:
  Hypothetical protein; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: JDO7802_02316
symbol: ihfA
gene_biotype: protein_coding
description:
  Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: JDO7802_02317
symbol: fabH_2
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase 3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: JDO7802_02318
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: JDO7802_02328
symbol: parE
gene_biotype: protein_coding
description:
  DNA topoisomerase 4 subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily.


ensembl_gene_id: JDO7802_02331
symbol: CTQ50310.1
gene_biotype: protein_coding
description:
  Heme exporter protein CcmD; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family.


ensembl_gene_id: JDO7802_02332
symbol: ccmC
gene_biotype: protein_coding
description:
  Cytochrome c-type biogenesis protein CcmC; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.


ensembl_gene_id: JDO7802_02333
symbol: ccmB
gene_biotype: protein_coding
description:
  Cytochrome c-type biogenesis protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family.


ensembl_gene_id: JDO7802_02334
symbol: ccmA
gene_biotype: protein_coding
description:
  Cytochrome c biogenesis ATP-binding export protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.


ensembl_gene_id: JDO7802_02349
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: JDO7802_02403
symbol: ghrB
gene_biotype: protein_coding
description:
  Glyoxylate/hydroxypyruvate reductase B; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: JDO7802_02406
symbol: bsaA
gene_biotype: protein_coding
description:
  Hypothetical protein; Glutathione peroxidase homolog BsaA; Belongs to the glutathione peroxidase family.


ensembl_gene_id: JDO7802_02410
symbol: modB_2
gene_biotype: protein_coding
description:
  Molybdenum transport system permease protein ModB; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: JDO7802_02417
symbol: lipB
gene_biotype: protein_coding
description:
  Octanoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: JDO7802_02423
symbol: glcB
gene_biotype: protein_coding
description:
  Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.


ensembl_gene_id: JDO7802_02433
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: JDO7802_02463
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase (quinone); Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: JDO7802_02465
symbol: yfkN_1
gene_biotype: protein_coding
description:
  Trifunctional nucleotide phosphoesterase protein YfkN precursor; Belongs to the 5'-nucleotidase family.


ensembl_gene_id: JDO7802_02468
symbol: thrS
gene_biotype: protein_coding
description:
  Threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: JDO7802_02469
symbol: guaB_2
gene_biotype: protein_coding
description:
  Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: JDO7802_02473
symbol: recA
gene_biotype: protein_coding
description:
  Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: JDO7802_02474
symbol: alaS_1
gene_biotype: protein_coding
description:
  Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: JDO7802_02478
symbol: icd
gene_biotype: protein_coding
description:
  Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.


ensembl_gene_id: JDO7802_02488
symbol: csd
gene_biotype: protein_coding
description:
  Putative cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.


ensembl_gene_id: JDO7802_02490
symbol: glnE
gene_biotype: protein_coding
description:
  Glutamate-ammonia-ligase adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transd [...]


ensembl_gene_id: JDO7802_02503
symbol: ctaA
gene_biotype: protein_coding
description:
  Heme A synthase; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily.


ensembl_gene_id: JDO7802_02504
symbol: CTQ50480.1
gene_biotype: protein_coding
description:
  Thermostable carboxypeptidase 1; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.


ensembl_gene_id: JDO7802_02507
symbol: psrA
gene_biotype: protein_coding
description:
  Sulfur reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: JDO7802_02531
symbol: mdtB
gene_biotype: protein_coding
description:
  Multidrug transporter MdtB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: JDO7802_02535
symbol: fdxA_2
gene_biotype: protein_coding
description:
  Seven-iron ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: JDO7802_02536
symbol: gltP
gene_biotype: protein_coding
description:
  Glutamate-aspartate carrier protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: JDO7802_02554
symbol: tpa
gene_biotype: protein_coding
description:
  Taurine--pyruvate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: JDO7802_02556
symbol: tauB
gene_biotype: protein_coding
description:
  Taurine import ATP-binding protein TauB; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family.


ensembl_gene_id: JDO7802_02561
symbol: cbiD
gene_biotype: protein_coding
description:
  cobalt-precorrin-6A synthase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.


ensembl_gene_id: JDO7802_02565
symbol: CTQ50541.1
gene_biotype: protein_coding
description:
  Putative proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1.


ensembl_gene_id: JDO7802_02570
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: JDO7802_02574
symbol: selO
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.


ensembl_gene_id: JDO7802_02580
symbol: trmFO
gene_biotype: protein_coding
description:
  Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.


ensembl_gene_id: JDO7802_02582
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: JDO7802_02595
symbol: fabF_1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase 2; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: JDO7802_02604
symbol: gltX_2
gene_biotype: protein_coding
description:
  Glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: JDO7802_02606
symbol: lexA
gene_biotype: protein_coding
description:
  LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: JDO7802_02608
symbol: moaC
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: JDO7802_02610
symbol: trpD_1
gene_biotype: protein_coding
description:
  Anthranilate synthase component II; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: JDO7802_02613
symbol: bpt
gene_biotype: protein_coding
description:
  arginyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.


ensembl_gene_id: JDO7802_02616
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA-specific 2-thiouridylase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: JDO7802_02625
symbol: hisI
gene_biotype: protein_coding
description:
  phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.


ensembl_gene_id: JDO7802_02627
symbol: edd
gene_biotype: protein_coding
description:
  Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.


ensembl_gene_id: JDO7802_02637
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: JDO7802_02642
symbol: kynU
gene_biotype: protein_coding
description:
  Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.


ensembl_gene_id: JDO7802_02653
symbol: phnC
gene_biotype: protein_coding
description:
  Phosphate-import ATP-binding protein PhnC; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.


ensembl_gene_id: JDO7802_02663
symbol: mdoG
gene_biotype: protein_coding
description:
  Glucans biosynthesis protein G precursor; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs).


ensembl_gene_id: JDO7802_02667
symbol: cheD
gene_biotype: protein_coding
description:
  Chemoreceptor glutamine deamidase CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: JDO7802_02671
symbol: dus_1
gene_biotype: protein_coding
description:
  Putative tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily.


ensembl_gene_id: JDO7802_02676
symbol: yrrK
gene_biotype: protein_coding
description:
  Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: JDO7802_02683
symbol: sodB
gene_biotype: protein_coding
description:
  Superoxide dismutase [Fe]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: JDO7802_02705
symbol: hpt
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: JDO7802_02708
symbol: pgpA
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphatase A; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).


ensembl_gene_id: JDO7802_02709
symbol: ispDF
gene_biotype: protein_coding
description:
  Bifunctional enzyme IspD/IspF; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF).


ensembl_gene_id: JDO7802_02710
symbol: dus_2
gene_biotype: protein_coding
description:
  Putative tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: JDO7802_02718
symbol: hfq
gene_biotype: protein_coding
description:
  Host factor-I protein; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: JDO7802_02719
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: JDO7802_02723
symbol: tsf
gene_biotype: protein_coding
description:
  Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: JDO7802_02728
symbol: rplU
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: JDO7802_02733
symbol: cgtA
gene_biotype: protein_coding
description:
  GTP-binding protein Obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: JDO7802_02734
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: JDO7802_02735
symbol: proA
gene_biotype: protein_coding
description:
  Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: JDO7802_02739
symbol: pstC
gene_biotype: protein_coding
description:
  Phosphate transport system permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: JDO7802_02741
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate import ATP-binding protein PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: JDO7802_02789
symbol: lpxB
gene_biotype: protein_coding
description:
  Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: JDO7802_02791
symbol: lpxA
gene_biotype: protein_coding
description:
  Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: JDO7802_02792
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: JDO7802_02794
symbol: bamA
gene_biotype: protein_coding
description:
  Outer membrane protein assembly factor BamA precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: JDO7802_02797
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: JDO7802_02799
symbol: ispU
gene_biotype: protein_coding
description:
  Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific); Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: JDO7802_02800
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome-releasing factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: JDO7802_02802
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: JDO7802_02805
symbol: nrdJ
gene_biotype: protein_coding
description:
  Vitamin B12-dependent ribonucleotide reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: JDO7802_02809
symbol: pdxH
gene_biotype: protein_coding
description:
  Pyridoxine/pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).


ensembl_gene_id: JDO7802_02814
symbol: gpt
gene_biotype: protein_coding
description:
  Xanthine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.


ensembl_gene_id: JDO7802_02830
symbol: hpsN_1
gene_biotype: protein_coding
description:
  Sulfopropanediol 3-dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: JDO7802_02836
symbol: rlmE
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.


ensembl_gene_id: JDO7802_02866
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: JDO7802_02869
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: JDO7802_02870
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: JDO7802_02873
symbol: xerD
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: JDO7802_02880
symbol: valS
gene_biotype: protein_coding
description:
  Valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: JDO7802_02884
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: JDO7802_02885
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: JDO7802_02889
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: JDO7802_02894
symbol: ureG
gene_biotype: protein_coding
description:
  Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.


ensembl_gene_id: JDO7802_02896
symbol: ureF
gene_biotype: protein_coding
description:
  Urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.


ensembl_gene_id: JDO7802_02897
symbol: ureE1
gene_biotype: protein_coding
description:
  Urease accessory protein UreE 1; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.


ensembl_gene_id: JDO7802_02907
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: JDO7802_02909
symbol: dnaB
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: JDO7802_02910
symbol: dadX
gene_biotype: protein_coding
description:
  Alanine racemase, catabolic; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: JDO7802_02912
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: JDO7802_02914
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase precursor; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: JDO7802_02924
symbol: gap1
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase 1; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: JDO7802_02929
symbol: acoA
gene_biotype: protein_coding
description:
  Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: JDO7802_02930
symbol: bfmBAB
gene_biotype: protein_coding
description:
  2-oxoisovalerate dehydrogenase subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.


ensembl_gene_id: JDO7802_02931
symbol: pdhC
gene_biotype: protein_coding
description:
  Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: JDO7802_02949
symbol: mltG
gene_biotype: protein_coding
description:
  Putative aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: JDO7802_02959
symbol: fabG_9
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase FabG; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: JDO7802_02962
symbol: ccmE
gene_biotype: protein_coding
description:
  Heme chaperone CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.


ensembl_gene_id: JDO7802_02967
symbol: metA
gene_biotype: protein_coding
description:
  Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.


ensembl_gene_id: JDO7802_02982
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: JDO7802_02983
symbol: banIM
gene_biotype: protein_coding
description:
  Modification methylase BanI; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.


ensembl_gene_id: JDO7802_02994
symbol: tatC
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: JDO7802_02996
symbol: tatAd
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatAd; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: JDO7802_02998
symbol: pcm_3
gene_biotype: protein_coding
description:
  Protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.


ensembl_gene_id: JDO7802_02999
symbol: surE
gene_biotype: protein_coding
description:
  5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: JDO7802_03004
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: JDO7802_03012
symbol: rnd_2
gene_biotype: protein_coding
description:
  Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family.


ensembl_gene_id: JDO7802_03013
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: JDO7802_03024
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: JDO7802_03025
symbol: anmK
gene_biotype: protein_coding
description:
  Anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.


ensembl_gene_id: JDO7802_03026
symbol: tyrS
gene_biotype: protein_coding
description:
  Tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: JDO7802_03029
symbol: ppiB
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase B; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: JDO7802_03030
symbol: ppiA
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase A precursor; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: JDO7802_03041
symbol: ssb
gene_biotype: protein_coding
description:
  Helix-destabilizing protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: JDO7802_03044
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase component 1; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...]


ensembl_gene_id: JDO7802_03057
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: JDO7802_03080
symbol: lon
gene_biotype: protein_coding
description:
  Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: JDO7802_03081
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: JDO7802_03087
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: JDO7802_03095
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: JDO7802_03103
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: JDO7802_03110
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: JDO7802_03112
symbol: ogt
gene_biotype: protein_coding
description:
  Methylated-DNA--protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: JDO7802_03115
symbol: rne
gene_biotype: protein_coding
description:
  Ribonuclease E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily.


ensembl_gene_id: JDO7802_03118
symbol: purQ
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase 1; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]


ensembl_gene_id: JDO7802_03121
symbol: purS
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase subunit PurS; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought  [...]


ensembl_gene_id: JDO7802_03132
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase 2; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]


ensembl_gene_id: JDO7802_03139
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: JDO7802_03143
symbol: ttgE
gene_biotype: protein_coding
description:
  Toluene efflux pump membrane transporter TtgE; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: JDO7802_03147
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: JDO7802_03149
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: JDO7802_03150
symbol: deoA
gene_biotype: protein_coding
description:
  Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family.


ensembl_gene_id: JDO7802_03151
symbol: cdd
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: JDO7802_03154
symbol: gltX1
gene_biotype: protein_coding
description:
  Glutamate--tRNA ligase 1; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: JDO7802_03175
symbol: moaA
gene_biotype: protein_coding
description:
  Cyclic pyranopterin monophosphate synthase; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: JDO7802_03180
symbol: cysG_1
gene_biotype: protein_coding
description:
  Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family.  In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family.


ensembl_gene_id: JDO7802_03183
symbol: cysH
gene_biotype: protein_coding
description:
  Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.


ensembl_gene_id: JDO7802_03187
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: JDO7802_03202
symbol: rpsR
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: JDO7802_03206
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: JDO7802_03220
symbol: nnr
gene_biotype: protein_coding
description:
  Nicotinamide nucleotide repair protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the  [...]


ensembl_gene_id: JDO7802_03229
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: JDO7802_03281
symbol: CTQ51242.1
gene_biotype: protein_coding
description:
  CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: JDO7802_03286
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate synthase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: JDO7802_03287
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: JDO7802_03297
symbol: CTQ51258.1
gene_biotype: protein_coding
description:
  Putative efflux pump membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: JDO7802_03303
symbol: cynS
gene_biotype: protein_coding
description:
  Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.


ensembl_gene_id: JDO7802_03391
symbol: gatB
gene_biotype: protein_coding
description:
  Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: JDO7802_03453
symbol: yacG
gene_biotype: protein_coding
description:
  DNA gyrase inhibitor YacG; Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C- terminal domain of GyrB, which probably disrupts DNA binding by the gyrase.


ensembl_gene_id: JDO7802_03455
symbol: yhdE
gene_biotype: protein_coding
description:
  Maf-like protein YhdE; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: JDO7802_03456
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: JDO7802_03457
symbol: CTQ51418.1
gene_biotype: protein_coding
description:
  Arsenate reductase (thioredoxin); Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: JDO7802_03461
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: JDO7802_03463
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: JDO7802_03479
symbol: katG_2
gene_biotype: protein_coding
description:
  Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.


ensembl_gene_id: JDO7802_03520
symbol: nasA
gene_biotype: protein_coding
description:
  Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.


# pathwayInfo

id: CL:100
description: rRNA-binding, and Elongation factor G C-terminus
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:100_rRNA-binding,_and_Elongation_factor_G_C-terminus


id: CL:101
description: rRNA-binding, and Elongation factor G C-terminus
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:101_rRNA-binding,_and_Elongation_factor_G_C-terminus


id: CL:1019
description: Mostly uncharacterized, incl. 2-deoxyribonucleotide metabolic process, and Maf-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1019_Mostly_uncharacterized,_incl._2-deoxyribonucleotide_metabolic_process,_and_Maf-like_protein


id: CL:1022
description: Mixed, incl. dCTP deaminase activity, and Pyrimidine nucleotide salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1022_Mixed,_incl._dCTP_deaminase_activity,_and_Pyrimidine_nucleotide_salvage


id: CL:1036
description: Mixed, incl. Maf-like protein, and Enolpyruvate transferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1036_Mixed,_incl._Maf-like_protein,_and_Enolpyruvate_transferase_domain


id: CL:1050
description: Mixed, incl. RNA polymerase sigma-70, and 3Fe-4S
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1050_Mixed,_incl._RNA_polymerase_sigma-70,_and_3Fe-4S


id: CL:1052
description: Mixed, incl. RNA polymerase sigma-70, and 3Fe-4S
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1052_Mixed,_incl._RNA_polymerase_sigma-70,_and_3Fe-4S


id: CL:1077
description: Mixed, incl. Thioredoxin-like superfamily, and Response to oxidative stress
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1077_Mixed,_incl._Thioredoxin-like_superfamily,_and_Response_to_oxidative_stress


id: CL:1078
description: Mixed, incl. Thioredoxin-like superfamily, and Response to oxidative stress
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1078_Mixed,_incl._Thioredoxin-like_superfamily,_and_Response_to_oxidative_stress


id: CL:1079
description: Mixed, incl. Thioredoxin-like superfamily, and Cytochrome complex assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1079_Mixed,_incl._Thioredoxin-like_superfamily,_and_Cytochrome_complex_assembly


id: CL:1080
description: Glutathione metabolism, and Thioredoxin, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1080_Glutathione_metabolism,_and_Thioredoxin,_conserved_site


id: CL:1082
description: Thioredoxin-like superfamily, and Pyridine nucleotide-disulphide oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1082_Thioredoxin-like_superfamily,_and_Pyridine_nucleotide-disulphide_oxidoreductase


id: CL:1084
description: Glutathione S-transferase, C-terminal domain superfamily, and Antioxidant
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1084_Glutathione_S-transferase,_C-terminal_domain_superfamily,_and_Antioxidant


id: CL:1101
description: Thioredoxin, conserved site, and Pyridine nucleotide-disulphide oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1101_Thioredoxin,_conserved_site,_and_Pyridine_nucleotide-disulphide_oxidoreductase


id: CL:1123
description: Macro domain-like, and Omega peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1123_Macro_domain-like,_and_Omega_peptidase_activity


id: CL:1136
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1136_Cytochrome_complex_assembly,_and_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor

description:
  Cytochrome complex assembly, and Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor


id: CL:1138
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1138_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor,_and_Thioredoxin,_conserved_site

description:
  Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor, and Thioredoxin, conserved site


id: CL:1152
description: Heme transport, and Signal-anchor
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1152_Heme_transport,_and_Signal-anchor


id: CL:1169
description: Mixed, incl. Peroxidase, and Cellular iron ion homeostasis
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1169_Mixed,_incl._Peroxidase,_and_Cellular_iron_ion_homeostasis


id: CL:1179
description: Mixed, incl. Protein deglycase activity, and Glyoxalase I, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1179_Mixed,_incl._Protein_deglycase_activity,_and_Glyoxalase_I,_conserved_site


id: CL:1182
description: Mixed, incl. Protein deglycase activity, and Oxidoreductase, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1182_Mixed,_incl._Protein_deglycase_activity,_and_Oxidoreductase,_N-terminal_domain


id: CL:1205
description: Cellular amino acid metabolic process, and Ribonucleoside monophosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1205_Cellular_amino_acid_metabolic_process,_and_Ribonucleoside_monophosphate_biosynthetic_process


id: CL:1206
description: Cellular amino acid metabolic process, and Ribonucleoside monophosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1206_Cellular_amino_acid_metabolic_process,_and_Ribonucleoside_monophosphate_biosynthetic_process


id: CL:1207
description: Alpha-amino acid metabolic process, and Ribonucleoside monophosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1207_Alpha-amino_acid_metabolic_process,_and_Ribonucleoside_monophosphate_biosynthetic_process


id: CL:1208
description: Alpha-amino acid metabolic process, and Ribonucleoside monophosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1208_Alpha-amino_acid_metabolic_process,_and_Ribonucleoside_monophosphate_biosynthetic_process


id: CL:1209
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1209_Mixed,_incl._Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_and_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors

description:
  Mixed, incl. Oxidoreductase activity, acting on the CH-NH group of donors, and Oxidoreductase activity, acting on the CH-NH2 group of donors


id: CL:1210
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1210_Mixed,_incl._Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_and_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors

description:
  Mixed, incl. Oxidoreductase activity, acting on the CH-NH group of donors, and Oxidoreductase activity, acting on the CH-NH2 group of donors


id: CL:1211
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1211_Mixed,_incl._Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_and_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors

description:
  Mixed, incl. Oxidoreductase activity, acting on the CH-NH group of donors, and Oxidoreductase activity, acting on the CH-NH2 group of donors


id: CL:1212
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1212_GTP-binding_protein_TrmE/Aminomethyltransferase_GcvT,_domain_1,_and_Tetrahydrofolate_metabolic_process

description:
  GTP-binding protein TrmE/Aminomethyltransferase GcvT, domain 1, and Tetrahydrofolate metabolic process


id: CL:1216
description: GTP-binding protein TrmE/Aminomethyltransferase GcvT, domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1216_GTP-binding_protein_TrmE/Aminomethyltransferase_GcvT,_domain_1


id: CL:1217
description: Glycine cleavage T-protein/YgfZ, C-terminal, and Sarcosine oxidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1217_Glycine_cleavage_T-protein/YgfZ,_C-terminal,_and_Sarcosine_oxidase_activity


id: CL:1228
description: Sarcosine oxidase activity, and FAD dependent oxidoreductase central domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1228_Sarcosine_oxidase_activity,_and_FAD_dependent_oxidoreductase_central_domain


id: CL:1240
description: Glycine metabolic process, and One-carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1240_Glycine_metabolic_process,_and_One-carbon_metabolism


id: CL:1253
description: Mixed, incl. Glutamate synthase activity, and Cytochrome P450
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1253_Mixed,_incl._Glutamate_synthase_activity,_and_Cytochrome_P450


id: CL:1255
description: Cytochrome P450, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1255_Cytochrome_P450,_and_4Fe-4S_dicluster_domain


id: CL:1278
description: Biotin metabolic process, and 5-aminolevulinate synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1278_Biotin_metabolic_process,_and_5-aminolevulinate_synthase_activity


id: CL:1287
description: Mixed, incl. Proline metabolic process, and Ammonia ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1287_Mixed,_incl._Proline_metabolic_process,_and_Ammonia_ligase_activity


id: CL:1288
description: Proline metabolic process, and D-Glutamine and D-glutamate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1288_Proline_metabolic_process,_and_D-Glutamine_and_D-glutamate_metabolism


id: CL:1299
description: Ammonia ligase activity, and Glutamine amidotransferase class-I
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1299_Ammonia_ligase_activity,_and_Glutamine_amidotransferase_class-I


id: CL:1310
description: Ribonucleoside monophosphate biosynthetic process, and Arginine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1310_Ribonucleoside_monophosphate_biosynthetic_process,_and_Arginine_biosynthetic_process


id: CL:1311
description: Ribonucleoside monophosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1311_Ribonucleoside_monophosphate_biosynthetic_process


id: CL:1314
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1314_De_novo_IMP_biosynthetic_process


id: CL:1316
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1316_De_novo_IMP_biosynthetic_process


id: CL:1336
description: GMP biosynthetic process, and Peptidase family M50
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1336_GMP_biosynthetic_process,_and_Peptidase_family_M50


id: CL:1363
description: Arginine biosynthetic process, and Lysine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1363_Arginine_biosynthetic_process,_and_Lysine_biosynthetic_process


id: CL:1401
description: Sulfur amino acid metabolic process, and L-serine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1401_Sulfur_amino_acid_metabolic_process,_and_L-serine_biosynthetic_process


id: CL:1402
description: Sulfur amino acid metabolic process, and One-carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1402_Sulfur_amino_acid_metabolic_process,_and_One-carbon_metabolism


id: CL:1404
description: Homoserine metabolic process, and One-carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1404_Homoserine_metabolic_process,_and_One-carbon_metabolism


id: CL:1419
description: Mixed, incl. FAD-linked oxidoreductase-like, and Cobalamin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1419_Mixed,_incl._FAD-linked_oxidoreductase-like,_and_Cobalamin_binding


id: CL:1434
description: Cysteine biosynthetic process from serine, and Allosteric substrate binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1434_Cysteine_biosynthetic_process_from_serine,_and_Allosteric_substrate_binding_domain_superfamily


id: CL:1446
description: Amino-acid biosynthesis, and Phenylalanine, tyrosine and tryptophan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1446_Amino-acid_biosynthesis,_and_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis


id: CL:1447
description: Phenylalanine, tyrosine and tryptophan biosynthesis, and Histidine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1447_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis,_and_Histidine_biosynthetic_process


id: CL:1448
description: Phenylalanine, tyrosine and tryptophan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1448_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis


id: CL:1449
description: Aromatic amino acid biosynthesis, and Anthranilate phosphoribosyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1449_Aromatic_amino_acid_biosynthesis,_and_Anthranilate_phosphoribosyl_transferase


id: CL:145
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:145_Mixed,_incl._Zinc-binding_ribosomal_protein,_and_Ribosomal_protein_L7/L12,_C-terminal/adaptor_protein_ClpS-like

description:
  Mixed, incl. Zinc-binding ribosomal protein, and Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like


id: CL:1481
description: Novobiocin biosynthesis, and Aromatic amino acid family biosynthetic process, prephenate pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1481_Novobiocin_biosynthesis,_and_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: CL:1525
description: Branched-chain amino acid biosynthetic process, and Taurine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1525_Branched-chain_amino_acid_biosynthetic_process,_and_Taurine_catabolic_process


id: CL:1527
description: Branched-chain amino acid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1527_Branched-chain_amino_acid_biosynthesis


id: CL:1543
description: Aminotransferase class IV, and Dihydroxy-acid dehydratase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1543_Aminotransferase_class_IV,_and_Dihydroxy-acid_dehydratase_activity


id: CL:155
description: Mixed, incl. Zinc-binding ribosomal protein, and Ribosomal large subunit assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:155_Mixed,_incl._Zinc-binding_ribosomal_protein,_and_Ribosomal_large_subunit_assembly


id: CL:1560
description: Polyamine biosynthetic process, and Agmatinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1560_Polyamine_biosynthetic_process,_and_Agmatinase_activity


id: CL:1574
description: Mixed, incl. Isoprene biosynthesis, and Riboflavin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1574_Mixed,_incl._Isoprene_biosynthesis,_and_Riboflavin_metabolic_process


id: CL:1575
description: Mixed, incl. Riboflavin metabolic process, and Folic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1575_Mixed,_incl._Riboflavin_metabolic_process,_and_Folic_acid_metabolic_process


id: CL:1576
description: Riboflavin metabolic process, and Folic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1576_Riboflavin_metabolic_process,_and_Folic_acid_metabolic_process


id: CL:1599
description: Coenzyme A metabolic process, and Methyltransferase small domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1599_Coenzyme_A_metabolic_process,_and_Methyltransferase_small_domain


id: CL:1608
description: Isoprene biosynthesis, and DNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1608_Isoprene_biosynthesis,_and_DNA_catabolic_process


id: CL:1611
description: Isopentenyl diphosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1611_Isopentenyl_diphosphate_metabolic_process


id: CL:1622
description: Mixed, incl. DNA catabolic process, and Transketolase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1622_Mixed,_incl._DNA_catabolic_process,_and_Transketolase,_N-terminal


id: CL:1633
description: Mixed, incl. Carbon metabolism, and Monocarboxylic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1633_Mixed,_incl._Carbon_metabolism,_and_Monocarboxylic_acid_metabolic_process


id: CL:1634
description: Mixed, incl. Carbon metabolism, and Fatty acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1634_Mixed,_incl._Carbon_metabolism,_and_Fatty_acid_metabolism


id: CL:1635
description: Mixed, incl. Carbon metabolism, and Valine, leucine and isoleucine degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1635_Mixed,_incl._Carbon_metabolism,_and_Valine,_leucine_and_isoleucine_degradation


id: CL:1636
description: Mixed, incl. Carbon metabolism, and Valine, leucine and isoleucine degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1636_Mixed,_incl._Carbon_metabolism,_and_Valine,_leucine_and_isoleucine_degradation


id: CL:1637
description: Carbon metabolism, and Valine, leucine and isoleucine degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1637_Carbon_metabolism,_and_Valine,_leucine_and_isoleucine_degradation


id: CL:1638
description: Carbon metabolism, and Acyl-CoA dehydrogenase, middle domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1638_Carbon_metabolism,_and_Acyl-CoA_dehydrogenase,_middle_domain


id: CL:1639
description: Citrate cycle (TCA cycle), and Propanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1639_Citrate_cycle_(TCA_cycle),_and_Propanoate_metabolism


id: CL:1641
description: Citrate cycle (TCA cycle), and AMP-binding enzyme C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1641_Citrate_cycle_(TCA_cycle),_and_AMP-binding_enzyme_C-terminal_domain


id: CL:1642
description: Citrate cycle (TCA cycle), and Malic enzyme activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1642_Citrate_cycle_(TCA_cycle),_and_Malic_enzyme_activity


id: CL:1647
description: Malate dehydrogenase activity, and Fumarate lyase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1647_Malate_dehydrogenase_activity,_and_Fumarate_lyase,_conserved_site


id: CL:1661
description: Succinate dehydrogenase activity, and CoA-ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1661_Succinate_dehydrogenase_activity,_and_CoA-ligase


id: CL:1672
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1672_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_disulfide_as_acceptor,_and_e3_binding_domain

description:
  Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, and e3 binding domain


id: CL:1697
description: AMP binding, and Aldehyde dehydrogenase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1697_AMP_binding,_and_Aldehyde_dehydrogenase_domain


id: CL:1718
description: Methylmalonyl-CoA mutase, and Glyoxalase-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1718_Methylmalonyl-CoA_mutase,_and_Glyoxalase-like_domain


id: CL:1728
description: Butanoate metabolism, and Acyl-CoA dehydrogenase, middle domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1728_Butanoate_metabolism,_and_Acyl-CoA_dehydrogenase,_middle_domain


id: CL:1729
description: Butanoate metabolism, and Acyl-CoA dehydrogenase, middle domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1729_Butanoate_metabolism,_and_Acyl-CoA_dehydrogenase,_middle_domain


id: CL:1731
description: Mixed, incl. Enoyl-CoA hydratase/isomerase, and Thiolase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1731_Mixed,_incl._Enoyl-CoA_hydratase/isomerase,_and_Thiolase


id: CL:1734
description: Enoyl-CoA hydratase/isomerase, and Thiolase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1734_Enoyl-CoA_hydratase/isomerase,_and_Thiolase


id: CL:175
description: Ribosomal subunit, and mRNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:175_Ribosomal_subunit,_and_mRNA_binding


id: CL:1753
description: Acyl-CoA dehydrogenase N terminal , and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1753_Acyl-CoA_dehydrogenase_N_terminal_,_and_Electron_transfer_flavoprotein_domain


id: CL:1772
description: Mixed, incl. Host cell, and Branched-chain amino acid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1772_Mixed,_incl._Host_cell,_and_Branched-chain_amino_acid_catabolic_process


id: CL:1782
description: Mixed, incl. propionyl-CoA carboxylase activity, and Ketone body metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1782_Mixed,_incl._propionyl-CoA_carboxylase_activity,_and_Ketone_body_metabolic_process


id: CL:1785
description: propionyl-CoA carboxylase activity, and Ketone body metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1785_propionyl-CoA_carboxylase_activity,_and_Ketone_body_metabolic_process


id: CL:1804
description: Mixed, incl. Acyl-CoA dehydrogenase, middle domain, and Fatty acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1804_Mixed,_incl._Acyl-CoA_dehydrogenase,_middle_domain,_and_Fatty_acid_metabolism


id: CL:1805
description: Mixed, incl. Acyl-CoA dehydrogenase, middle domain, and 3-hydroxyacyl-CoA dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1805_Mixed,_incl._Acyl-CoA_dehydrogenase,_middle_domain,_and_3-hydroxyacyl-CoA_dehydrogenase_activity


id: CL:1808
description: 3-hydroxyacyl-CoA dehydrogenase activity, and Acyl-CoA dehydrogenase, middle domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1808_3-hydroxyacyl-CoA_dehydrogenase_activity,_and_Acyl-CoA_dehydrogenase,_middle_domain


id: CL:1819
description: Mixed, incl. Helix_turn_helix isocitrate lyase regulation, and Acyl-coenzyme A thioesterase 13
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1819_Mixed,_incl._Helix_turn_helix_isocitrate_lyase_regulation,_and_Acyl-coenzyme_A_thioesterase_13


id: CL:1829
description: Mixed, incl. Mannitol dehydrogenase, and ABC transporter, maltose/maltodextrin import, MalK-like
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1829_Mixed,_incl._Mannitol_dehydrogenase,_and_ABC_transporter,_maltose/maltodextrin_import,_MalK-like


id: CL:1840
description: Mixed, incl. Citrate lyase beta subunit-like, and Putative metallopeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1840_Mixed,_incl._Citrate_lyase_beta_subunit-like,_and_Putative_metallopeptidase


id: CL:1852
description: Fatty acid biosynthesis, and Short-chain dehydrogenase/reductase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1852_Fatty_acid_biosynthesis,_and_Short-chain_dehydrogenase/reductase,_conserved_site


id: CL:1854
description: Fatty acid biosynthesis, and Phosphopantetheine
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1854_Fatty_acid_biosynthesis,_and_Phosphopantetheine


id: CL:1860
description: FabA-like domain, and Phosphopantetheine
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1860_FabA-like_domain,_and_Phosphopantetheine


id: CL:1879
description: acetyl-CoA carboxylase complex, and 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1879_acetyl-CoA_carboxylase_complex,_and_3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III


id: CL:1889
description: Sphingolipid metabolism, and KR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1889_Sphingolipid_metabolism,_and_KR_domain


id: CL:1909
description: Mixed, incl. Epoxide hydrolase-like, and (S)-2-haloacid dehalogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1909_Mixed,_incl._Epoxide_hydrolase-like,_and_(S)-2-haloacid_dehalogenase_activity


id: CL:1923
description: Mixed, incl. Lactate metabolic process, and Glycolate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1923_Mixed,_incl._Lactate_metabolic_process,_and_Glycolate_metabolic_process


id: CL:1924
description: Mixed, incl. Lactate metabolic process, and Glycolate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1924_Mixed,_incl._Lactate_metabolic_process,_and_Glycolate_metabolic_process


id: CL:1926
description: Mixed, incl. Lactate metabolic process, and Phosphoglycolate phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1926_Mixed,_incl._Lactate_metabolic_process,_and_Phosphoglycolate_phosphatase_activity


id: CL:1927
description: Lactate metabolic process, and Phosphoglycolate phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1927_Lactate_metabolic_process,_and_Phosphoglycolate_phosphatase_activity


id: CL:1930
description: Phosphoglycolate phosphatase activity, and FAD-linked oxidase-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1930_Phosphoglycolate_phosphatase_activity,_and_FAD-linked_oxidase-like,_C-terminal


id: CL:1952
description: Mixed, incl. L-rhamnonate dehydratase-like, and Fumarylacetoacetase-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1952_Mixed,_incl._L-rhamnonate_dehydratase-like,_and_Fumarylacetoacetase-like,_C-terminal


id: CL:1969
description: Mixed, incl. tRNA-binding domain, and Peptidyl-serine acetylation
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1969_Mixed,_incl._tRNA-binding_domain,_and_Peptidyl-serine_acetylation


id: CL:1982
description: Carbohydrate metabolic process, and Periplasmic binding protein-like I
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1982_Carbohydrate_metabolic_process,_and_Periplasmic_binding_protein-like_I


id: CL:1984
description: Carbohydrate metabolic process, and LacI-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1984_Carbohydrate_metabolic_process,_and_LacI-type_HTH_domain


id: CL:1985
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1985_Mixed,_incl._Cellular_carbohydrate_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis

description:
  Mixed, incl. Cellular carbohydrate biosynthetic process, and O-Antigen nucleotide sugar biosynthesis


id: CL:1986
description: O-Antigen nucleotide sugar biosynthesis, and Starch and sucrose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1986_O-Antigen_nucleotide_sugar_biosynthesis,_and_Starch_and_sucrose_metabolism


id: CL:1987
description: O-Antigen nucleotide sugar biosynthesis, and Bacterial sugar transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1987_O-Antigen_nucleotide_sugar_biosynthesis,_and_Bacterial_sugar_transferase


id: CL:1989
description: UDP-glucose 4-epimerase, and Nucleotide-sugar biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:1989_UDP-glucose_4-epimerase,_and_Nucleotide-sugar_biosynthetic_process


id: CL:2036
description: Mixed, incl. Cellular polysaccharide biosynthetic process, and Vacuole
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2036_Mixed,_incl._Cellular_polysaccharide_biosynthetic_process,_and_Vacuole


id: CL:2038
description: Mixed, incl. Glycosyltransferase 2-like, and Pectin lyase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2038_Mixed,_incl._Glycosyltransferase_2-like,_and_Pectin_lyase_fold


id: CL:2052
description: Mixed, incl. Vacuole, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2052_Mixed,_incl._Vacuole,_and_Tetratricopeptide_repeat


id: CL:2062
description: Mixed, incl. Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2062_Mixed,_incl._Pentose_phosphate_pathway,_and_Glycolysis


id: CL:2063
description: Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2063_Pentose_phosphate_pathway,_and_Glycolysis


id: CL:2064
description: Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2064_Pentose_phosphate_pathway,_and_Glycolysis


id: CL:2065
description: Glycolytic process, and Pentose-phosphate shunt
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2065_Glycolytic_process,_and_Pentose-phosphate_shunt


id: CL:2067
description: Glycolysis, and Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2067_Glycolysis,_and_Glyceraldehyde_3-phosphate_dehydrogenase,_NAD_binding_domain


id: CL:2070
description: Glycolysis, and Transketolase or transaldolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2070_Glycolysis,_and_Transketolase_or_transaldolase_activity


id: CL:2093
description: Gluconate utilization, and Pentose-phosphate shunt
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2093_Gluconate_utilization,_and_Pentose-phosphate_shunt


id: CL:2104
description: Carbohydrate kinase PfkB, and Pentose-phosphate shunt
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2104_Carbohydrate_kinase_PfkB,_and_Pentose-phosphate_shunt


id: CL:2124
description: Mixed, incl. DHH family, and Glycerol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2124_Mixed,_incl._DHH_family,_and_Glycerol_metabolic_process


id: CL:2140
description: Mixed, incl. Galactose metabolism, and Oxidoreductase family, C-terminal alpha/beta domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2140_Mixed,_incl._Galactose_metabolism,_and_Oxidoreductase_family,_C-terminal_alpha/beta_domain


id: CL:2141
description: Mixed, incl. Periplasmic binding protein, and Oxidoreductase family, C-terminal alpha/beta domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2141_Mixed,_incl._Periplasmic_binding_protein,_and_Oxidoreductase_family,_C-terminal_alpha/beta_domain


id: CL:2142
description: Mixed, incl. Oxidoreductase family, C-terminal alpha/beta domain, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2142_Mixed,_incl._Oxidoreductase_family,_C-terminal_alpha/beta_domain,_and_Periplasmic_binding_protein


id: CL:2146
description: Mixed, incl. Xylose isomerase-like TIM barrel, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2146_Mixed,_incl._Xylose_isomerase-like_TIM_barrel,_and_Periplasmic_binding_protein


id: CL:2158
description: Mixed, incl. Oxidoreductase family, C-terminal alpha/beta domain, and ROK family
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2158_Mixed,_incl._Oxidoreductase_family,_C-terminal_alpha/beta_domain,_and_ROK_family


id: CL:2171
description: Xylose metabolism, and Pentose transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2171_Xylose_metabolism,_and_Pentose_transmembrane_transport


id: CL:2184
description: Mixed, incl. Galactose metabolism, and Chloride transport
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2184_Mixed,_incl._Galactose_metabolism,_and_Chloride_transport


id: CL:2186
description: Mixed, incl. Galactosidase activity, and Galactonate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2186_Mixed,_incl._Galactosidase_activity,_and_Galactonate_metabolic_process


id: CL:2206
description: Mixed, incl. DeoC/FbaB/LacD aldolase, and Di-haem cytochrome c peroxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2206_Mixed,_incl._DeoC/FbaB/LacD_aldolase,_and_Di-haem_cytochrome_c_peroxidase


id: CL:2221
description: Mixed, incl. Nicotinate and nicotinamide metabolism, and Cellular metabolic compound salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2221_Mixed,_incl._Nicotinate_and_nicotinamide_metabolism,_and_Cellular_metabolic_compound_salvage


id: CL:2222
description: Mixed, incl. Nicotinate and nicotinamide metabolism, and Cellular metabolic compound salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2222_Mixed,_incl._Nicotinate_and_nicotinamide_metabolism,_and_Cellular_metabolic_compound_salvage


id: CL:2223
description: Nicotinate and nicotinamide metabolism, and Cellular metabolic compound salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2223_Nicotinate_and_nicotinamide_metabolism,_and_Cellular_metabolic_compound_salvage


id: CL:2224
description: Nicotinate and nicotinamide metabolism, and Cellular metabolic compound salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2224_Nicotinate_and_nicotinamide_metabolism,_and_Cellular_metabolic_compound_salvage


id: CL:2226
description: Nucleoside metabolic process, and Adenine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2226_Nucleoside_metabolic_process,_and_Adenine_catabolic_process


id: CL:2228
description: Adenine metabolic process, and Phosphorylase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2228_Adenine_metabolic_process,_and_Phosphorylase_superfamily


id: CL:2242
description: Pyrimidine nucleoside metabolic process, and Deoxyribonucleotide catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2242_Pyrimidine_nucleoside_metabolic_process,_and_Deoxyribonucleotide_catabolic_process


id: CL:2260
description: Pyridine nucleotide metabolic process, and DHS-like NAD/FAD-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2260_Pyridine_nucleotide_metabolic_process,_and_DHS-like_NAD/FAD-binding_domain_superfamily


id: CL:2262
description: Nicotinamide nucleotide biosynthetic process, and DHS-like NAD/FAD-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2262_Nicotinamide_nucleotide_biosynthetic_process,_and_DHS-like_NAD/FAD-binding_domain_superfamily


id: CL:228
description: Mixed, incl. TGS domain, and RF-1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:228_Mixed,_incl._TGS_domain,_and_RF-1_domain


id: CL:2284
description: Mixed, incl. Antioxidant, and NUDIX domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2284_Mixed,_incl._Antioxidant,_and_NUDIX_domain


id: CL:2298
description: Mixed, incl. TAT protein transport complex, and Chromosome segregation
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2298_Mixed,_incl._TAT_protein_transport_complex,_and_Chromosome_segregation


id: CL:2301
description: Mixed, incl. TAT protein transport complex, and LysM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2301_Mixed,_incl._TAT_protein_transport_complex,_and_LysM_domain


id: CL:2322
description: Chromosome partition, and SPOR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2322_Chromosome_partition,_and_SPOR_domain


id: CL:2336
description: Mixed, incl. Multicellular organismal process, and Peptidase M48
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2336_Mixed,_incl._Multicellular_organismal_process,_and_Peptidase_M48


id: CL:2348
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2348_Mixed,_incl._Glycerophospholipid_metabolism,_and_Transferase_activity,_transferring_sulphur-containing_groups

description:
  Mixed, incl. Glycerophospholipid metabolism, and Transferase activity, transferring sulphur-containing groups


id: CL:2349
description: Mixed, incl. Glycerophospholipid metabolism, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2349_Mixed,_incl._Glycerophospholipid_metabolism,_and_Acetyltransferase_(GNAT)_domain


id: CL:2350
description: Mixed, incl. Glycerophospholipid metabolism, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2350_Mixed,_incl._Glycerophospholipid_metabolism,_and_Acetyltransferase_(GNAT)_domain


id: CL:2352
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2352_Mixed,_incl._Alditol_phosphate_metabolic_process,_and_Glycerophosphodiester_phosphodiesterase_domain

description:
  Mixed, incl. Alditol phosphate metabolic process, and Glycerophosphodiester phosphodiesterase domain


id: CL:2353
description: Phospholipid biosynthesis, and Ribosomal large subunit assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2353_Phospholipid_biosynthesis,_and_Ribosomal_large_subunit_assembly


id: CL:2364
description: Glycerophosphodiester phosphodiesterase domain, and Alditol phosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2364_Glycerophosphodiester_phosphodiesterase_domain,_and_Alditol_phosphate_metabolic_process


id: CL:2387
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2387_Mixed,_incl._CDP-alcohol_phosphatidyltransferase,_transmembrane_domain,_and_Glycerolipid_biosynthetic_process

description:
  Mixed, incl. CDP-alcohol phosphatidyltransferase, transmembrane domain, and Glycerolipid biosynthetic process


id: CL:2389
description: Mixed, incl. Cytidylyltransferase family, and Lytic transglycosylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2389_Mixed,_incl._Cytidylyltransferase_family,_and_Lytic_transglycosylase_activity


id: CL:240
description: Transcription termination, and RNA polymerase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:240_Transcription_termination,_and_RNA_polymerase_complex


id: CL:2418
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2418_Mixed,_incl._ATP-binding_cassette_(ABC)_transporter_complex,_substrate-binding_subunit-containing,_and_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor

description:
  Mixed, incl. ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing, and Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor


id: CL:2420
description: Mixed, incl. MOSC domain, and PP-loop family
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2420_Mixed,_incl._MOSC_domain,_and_PP-loop_family


id: CL:2434
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2434_Mixed,_incl._ATP-binding_cassette_(ABC)_transporter_complex,_substrate-binding_subunit-containing,_and_Glyceraldehyde_3-phosphate_dehydrogenase,_active_site

description:
  Mixed, incl. ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing, and Glyceraldehyde 3-phosphate dehydrogenase, active site


id: CL:2445
description: Mixed, incl. Electron transport chain, and Oxidative phosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2445_Mixed,_incl._Electron_transport_chain,_and_Oxidative_phosphorylation


id: CL:2446
description: Mixed, incl. Oxidative phosphorylation, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2446_Mixed,_incl._Oxidative_phosphorylation,_and_Sulfur_metabolism


id: CL:2447
description: Mixed, incl. Oxidative phosphorylation, and Family of unknown function (DUF5333)
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2447_Mixed,_incl._Oxidative_phosphorylation,_and_Family_of_unknown_function_(DUF5333)


id: CL:2448
description: Mixed, incl. Oxidative phosphorylation, and Family of unknown function (DUF5333)
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2448_Mixed,_incl._Oxidative_phosphorylation,_and_Family_of_unknown_function_(DUF5333)


id: CL:2449
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2449_Mixed,_incl._Oxidoreduction-driven_active_transmembrane_transporter_activity,_and_Oxidative_phosphorylation

description:
  Mixed, incl. Oxidoreduction-driven active transmembrane transporter activity, and Oxidative phosphorylation


id: CL:2451
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2451_Mixed,_incl._Oxidoreduction-driven_active_transmembrane_transporter_activity,_and_Peptidase_M16,_C-terminal

description:
  Mixed, incl. Oxidoreduction-driven active transmembrane transporter activity, and Peptidase M16, C-terminal


id: CL:2455
description: Quinone, and Thioredoxin-like [2Fe-2S] ferredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2455_Quinone,_and_Thioredoxin-like_[2Fe-2S]_ferredoxin


id: CL:2456
description: Quinone, and Thioredoxin-like [2Fe-2S] ferredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2456_Quinone,_and_Thioredoxin-like_[2Fe-2S]_ferredoxin


id: CL:2473
description: NADH dehydrogenase (quinone) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2473_NADH_dehydrogenase_(quinone)_activity


id: CL:2490
description: Mixed, incl. Respiratory chain, and Rieske [2Fe-2S] domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2490_Mixed,_incl._Respiratory_chain,_and_Rieske_[2Fe-2S]_domain


id: CL:2511
description: Mixed, incl. Family of unknown function (DUF5333), and Pantothenate kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2511_Mixed,_incl._Family_of_unknown_function_(DUF5333),_and_Pantothenate_kinase_activity


id: CL:2512
description: Mixed, incl. Pantothenate kinase activity, and Biotin/lipoate A/B protein ligase family
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2512_Mixed,_incl._Pantothenate_kinase_activity,_and_Biotin/lipoate_A/B_protein_ligase_family


id: CL:2523
description: Family of unknown function (DUF5333), and MAPEG family
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2523_Family_of_unknown_function_(DUF5333),_and_MAPEG_family


id: CL:2534
description: Mixed, incl. Heme biosynthesis, and Copper
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2534_Mixed,_incl._Heme_biosynthesis,_and_Copper


id: CL:2549
description: Cation:cation antiporter activity, and NADH:ubiquinone oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2549_Cation:cation_antiporter_activity,_and_NADH:ubiquinone_oxidoreductase


id: CL:2566
description: Mixed, incl. Sulfur metabolism, and Copper ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2566_Mixed,_incl._Sulfur_metabolism,_and_Copper_ion_binding


id: CL:2567
description: Mixed, incl. Sulfur metabolism, and Taurine and hypotaurine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2567_Mixed,_incl._Sulfur_metabolism,_and_Taurine_and_hypotaurine_metabolism


id: CL:2568
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2568_Mixed,_incl._Cytochrome_c-like_domain_superfamily,_and_Twin-arginine_translocation_pathway,_signal_sequence

description:
  Mixed, incl. Cytochrome c-like domain superfamily, and Twin-arginine translocation pathway, signal sequence


id: CL:2572
description: Mixed, incl. Sulfur oxidation, and Cytochrome c
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2572_Mixed,_incl._Sulfur_oxidation,_and_Cytochrome_c


id: CL:2575
description: Mixed, incl. Sulfur oxidation, and Cytochrome c
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2575_Mixed,_incl._Sulfur_oxidation,_and_Cytochrome_c


id: CL:2600
description: Mixed, incl. Six-bladed beta-propeller, TolB-like, and Cupredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2600_Mixed,_incl._Six-bladed_beta-propeller,_TolB-like,_and_Cupredoxin


id: CL:2616
description: Anaerobic respiration, and Taurine and hypotaurine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2616_Anaerobic_respiration,_and_Taurine_and_hypotaurine_metabolism


id: CL:2628
description: Mixed, incl. Copper ion transport, and Cytochrome c-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2628_Mixed,_incl._Copper_ion_transport,_and_Cytochrome_c-like_domain


id: CL:2629
description: Mixed, incl. E1-E2 ATPase, and Universal stress protein A family
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2629_Mixed,_incl._E1-E2_ATPase,_and_Universal_stress_protein_A_family


id: CL:2632
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2632_Mixed,_incl._Cytochrome_c_oxidase,_subunit_I,_copper-binding_site,_and_Positive_regulation_of_RNA_biosynthetic_process

description:
  Mixed, incl. Cytochrome c oxidase, subunit I, copper-binding site, and Positive regulation of RNA biosynthetic process


id: CL:2648
description: Mixed, incl. Copper ion transport, and Cytochrome c
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2648_Mixed,_incl._Copper_ion_transport,_and_Cytochrome_c


id: CL:2659
description: Mixed, incl. Ethanol metabolic process, and Shikimate / quinate 5-dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2659_Mixed,_incl._Ethanol_metabolic_process,_and_Shikimate_/_quinate_5-dehydrogenase


id: CL:2661
description: Ethanol metabolic process, and Formaldehyde metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2661_Ethanol_metabolic_process,_and_Formaldehyde_metabolic_process


id: CL:2673
description: Mixed, incl. Shikimate / quinate 5-dehydrogenase, and (S)-2-haloacid dehalogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2673_Mixed,_incl._Shikimate_/_quinate_5-dehydrogenase,_and_(S)-2-haloacid_dehalogenase_activity


id: CL:2686
description: Mixed, incl. LysE type translocator, and RNA-DNA hybrid ribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2686_Mixed,_incl._LysE_type_translocator,_and_RNA-DNA_hybrid_ribonuclease_activity


id: CL:2687
description: Mixed, incl. LysE type translocator, and Pyridoxine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2687_Mixed,_incl._LysE_type_translocator,_and_Pyridoxine_biosynthesis


id: CL:2689
description: Mixed, incl. NYN domain, and Peptidase S26
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2689_Mixed,_incl._NYN_domain,_and_Peptidase_S26


id: CL:2714
description: Mixed, incl. RNA-DNA hybrid ribonuclease activity, and Methyltransferase domain 25
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2714_Mixed,_incl._RNA-DNA_hybrid_ribonuclease_activity,_and_Methyltransferase_domain_25


id: CL:2725
description: Mixed, incl. Base excision repair, and SOS response
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2725_Mixed,_incl._Base_excision_repair,_and_SOS_response


id: CL:2726
description: Mixed, incl. Base excision repair, and SOS response
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2726_Mixed,_incl._Base_excision_repair,_and_SOS_response


id: CL:2728
description: Mixed, incl. DNA-(apurinic or apyrimidinic site) endonuclease activity, and AP endonuclease 1
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2728_Mixed,_incl._DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity,_and_AP_endonuclease_1


id: CL:2730
description: DNA-(apurinic or apyrimidinic site) endonuclease activity, and AP endonuclease 1
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2730_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity,_and_AP_endonuclease_1


id: CL:2744
description: Mixed, incl. Lon protease, N-terminal domain, and Transmembrane secretion effector
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2744_Mixed,_incl._Lon_protease,_N-terminal_domain,_and_Transmembrane_secretion_effector


id: CL:2761
description: Mixed, incl. Nucleotide excision repair, and UmuC domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2761_Mixed,_incl._Nucleotide_excision_repair,_and_UmuC_domain


id: CL:2763
description: Mixed, incl. UmuC domain, and Restriction endonuclease type II-like
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2763_Mixed,_incl._UmuC_domain,_and_Restriction_endonuclease_type_II-like


id: CL:2775
description: Mixed, incl. DNA ligase activity, and Alpha/beta hydrolase fold-3
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2775_Mixed,_incl._DNA_ligase_activity,_and_Alpha/beta_hydrolase_fold-3


id: CL:2787
description: Mostly uncharacterized, incl. Thioesterase-like superfamily, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2787_Mostly_uncharacterized,_incl._Thioesterase-like_superfamily,_and_Sigma-70,_region_4


id: CL:2789
description: Mixed, incl. Sigma-70, region 4, and EF-hand, calcium binding motif
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2789_Mixed,_incl._Sigma-70,_region_4,_and_EF-hand,_calcium_binding_motif


id: CL:2810
description: Mixed, incl. Prosthetic group metabolic process, and Iron-sulfur cluster assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2810_Mixed,_incl._Prosthetic_group_metabolic_process,_and_Iron-sulfur_cluster_assembly


id: CL:2811
description: Mixed, incl. Iron-sulfur cluster assembly, and BolA protein
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2811_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_BolA_protein


id: CL:2812
description: Mixed, incl. Iron-sulfur cluster assembly, and Sulfur relay system
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2812_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Sulfur_relay_system


id: CL:2813
description: Mixed, incl. Iron-sulfur cluster assembly, and Sulfur relay system
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2813_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Sulfur_relay_system


id: CL:2815
description: Iron-sulfur cluster assembly, and Cysteine desulfurase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2815_Iron-sulfur_cluster_assembly,_and_Cysteine_desulfurase


id: CL:2818
description: Iron-sulfur cluster assembly complex, and Cysteine desulfurase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2818_Iron-sulfur_cluster_assembly_complex,_and_Cysteine_desulfurase


id: CL:283
description: Translocation, and Protein targeting to ER
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:283_Translocation,_and_Protein_targeting_to_ER


id: CL:2839
description: Mixed, incl. Pyrimidine nucleotide salvage, and Serine aminopeptidase, S33
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2839_Mixed,_incl._Pyrimidine_nucleotide_salvage,_and_Serine_aminopeptidase,_S33


id: CL:285
description: Protein targeting to ER, and Protein carrier chaperone
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:285_Protein_targeting_to_ER,_and_Protein_carrier_chaperone


id: CL:2851
description: Mixed, incl. BolA protein, and Glutaredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2851_Mixed,_incl._BolA_protein,_and_Glutaredoxin


id: CL:2867
description: Mixed, incl. BolA protein, and Peptidase M3A/M3B
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2867_Mixed,_incl._BolA_protein,_and_Peptidase_M3A/M3B


id: CL:2876
description: Mixed, incl. Prosthetic group metabolic process, and Molybdate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2876_Mixed,_incl._Prosthetic_group_metabolic_process,_and_Molybdate_ion_transport


id: CL:2878
description: Prosthetic group metabolic process, and Amino acid transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2878_Prosthetic_group_metabolic_process,_and_Amino_acid_transmembrane_transport


id: CL:2879
description: Prosthetic group metabolic process, and PBP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2879_Prosthetic_group_metabolic_process,_and_PBP_domain


id: CL:2881
description: Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2881_Prosthetic_group_metabolic_process


id: CL:2895
description: Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2895_Prosthetic_group_metabolic_process


id: CL:2908
description: L-amino acid transport, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2908_L-amino_acid_transport,_and_Signal


id: CL:2920
description: Mixed, incl. Molybdate ion transport, and Short chain dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2920_Mixed,_incl._Molybdate_ion_transport,_and_Short_chain_dehydrogenase


id: CL:2944
description: Mixed, incl. Membrane, and Hint domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2944_Mixed,_incl._Membrane,_and_Hint_domain


id: CL:2945
description: Mixed, incl. Membrane, and Hint domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2945_Mixed,_incl._Membrane,_and_Hint_domain


id: CL:2946
description: Mixed, incl. Hint domain, and Membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2946_Mixed,_incl._Hint_domain,_and_Membrane


id: CL:2947
description: Mostly uncharacterized, incl. Negative regulation of biological process, and Cell cycle
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2947_Mostly_uncharacterized,_incl._Negative_regulation_of_biological_process,_and_Cell_cycle


id: CL:2948
description: Mostly uncharacterized, incl. Outer membrane, and DnaJ domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2948_Mostly_uncharacterized,_incl._Outer_membrane,_and_DnaJ_domain


id: CL:2951
description: Mostly uncharacterized, incl. Division septum assembly, and Alpha/beta knot methyltransferases
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2951_Mostly_uncharacterized,_incl._Division_septum_assembly,_and_Alpha/beta_knot_methyltransferases


id: CL:2952
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2952_Mixed,_incl._Division_septum_assembly,_and_Gram-negative-bacterium-type_cell_outer_membrane_assembly

description:
  Mixed, incl. Division septum assembly, and Gram-negative-bacterium-type cell outer membrane assembly


id: CL:2954
description: Mixed, incl. Lipopolysaccharide metabolic process, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2954_Mixed,_incl._Lipopolysaccharide_metabolic_process,_and_Coiled_coil


id: CL:2972
description: Mixed, incl. Alpha/beta knot methyltransferases, and OmpA family
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2972_Mixed,_incl._Alpha/beta_knot_methyltransferases,_and_OmpA_family


id: CL:2993
description: Mostly uncharacterized, incl. DnaJ domain, and Furfural degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2993_Mostly_uncharacterized,_incl._DnaJ_domain,_and_Furfural_degradation


id: CL:2995
description: Mixed, incl. Sugar-phosphatase activity, and EF-Hand 1, calcium-binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:2995_Mixed,_incl._Sugar-phosphatase_activity,_and_EF-Hand_1,_calcium-binding_site


id: CL:3020
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3020_Mostly_uncharacterized,_incl._Negative_regulation_by_symbiont_of_host_apoptotic_process,_and_Type_II_secretion_system_(T2SS),_protein_F

description:
  Mostly uncharacterized, incl. Negative regulation by symbiont of host apoptotic process, and Type II secretion system (T2SS), protein F


id: CL:3022
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3022_Mixed,_incl._Negative_regulation_by_symbiont_of_host_apoptotic_process,_and_Type_II_secretion_system_(T2SS),_protein_F

description:
  Mixed, incl. Negative regulation by symbiont of host apoptotic process, and Type II secretion system (T2SS), protein F


id: CL:3024
description: Mixed, incl. Type II secretion system (T2SS), protein F, and Pilus assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3024_Mixed,_incl._Type_II_secretion_system_(T2SS),_protein_F,_and_Pilus_assembly


id: CL:3026
description: Mixed, incl. Type II secretion system (T2SS), protein F, and Type II/IV secretion system protein
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3026_Mixed,_incl._Type_II_secretion_system_(T2SS),_protein_F,_and_Type_II/IV_secretion_system_protein


id: CL:3047
description: Negative regulation by symbiont of host apoptotic process, and SPOR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3047_Negative_regulation_by_symbiont_of_host_apoptotic_process,_and_SPOR_domain


id: CL:3076
description: Mixed, incl. Hint domain, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3076_Mixed,_incl._Hint_domain,_and_Glycosyl_transferase_family_2


id: CL:3077
description: Mixed, incl. Hint domain, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3077_Mixed,_incl._Hint_domain,_and_Glycosyl_transferase_family_2


id: CL:3079
description: Mixed, incl. Hint domain, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3079_Mixed,_incl._Hint_domain,_and_Glycosyl_transferase_family_2


id: CL:3081
description: Mixed, incl. Hint domain, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3081_Mixed,_incl._Hint_domain,_and_Glycosyl_transferase_family_2


id: CL:3082
description: Mixed, incl. Hint domain, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3082_Mixed,_incl._Hint_domain,_and_Glycosyl_transferase_family_2


id: CL:3084
description: Mixed, incl. Hint domain, and Polysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3084_Mixed,_incl._Hint_domain,_and_Polysaccharide_transport


id: CL:3087
description: Mixed, incl. Polysaccharide transport, and Xylosyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3087_Mixed,_incl._Polysaccharide_transport,_and_Xylosyltransferase


id: CL:3088
description: Mixed, incl. Polysaccharide transport, and Xylosyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3088_Mixed,_incl._Polysaccharide_transport,_and_Xylosyltransferase


id: CL:3090
description: Polysaccharide transport, and ABC-2 type transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3090_Polysaccharide_transport,_and_ABC-2_type_transporter


id: CL:3107
description: Mixed, incl. Xylosyltransferase, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3107_Mixed,_incl._Xylosyltransferase,_and_Glycosyl_transferase_family_2


id: CL:3124
description: Hint domain, and Pectin lyase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3124_Hint_domain,_and_Pectin_lyase_fold


id: CL:315
description: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:315_Aminoacyl-tRNA_synthetase,_class_Ia,_anticodon-binding


id: CL:3160
description: SH3-like domain, bacterial-type, and Peptidoglycan binding
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3160_SH3-like_domain,_bacterial-type,_and_Peptidoglycan_binding


id: CL:3196
description: Mixed, incl. Transglycosylase SLT domain, and CDP-diacylglycerol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3196_Mixed,_incl._Transglycosylase_SLT_domain,_and_CDP-diacylglycerol_metabolic_process


id: CL:3205
description: Mostly uncharacterized, incl. tRNA 5-leader removal, and Heparinase II/III-like
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3205_Mostly_uncharacterized,_incl._tRNA_5-leader_removal,_and_Heparinase_II/III-like


id: CL:3207
description: tRNA 5-leader removal, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3207_tRNA_5-leader_removal,_and_Signal


id: CL:3219
description: Mixed, incl. Heparinase II/III-like, and Lytic murein transglycosylase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3219_Mixed,_incl._Heparinase_II/III-like,_and_Lytic_murein_transglycosylase


id: CL:3228
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3228_Mostly_uncharacterized,_incl._Response_to_oxygen-containing_compound,_and_Putative_rhamnosyl_transferase

description:
  Mostly uncharacterized, incl. Response to oxygen-containing compound, and Putative rhamnosyl transferase


id: CL:3230
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3230_Mostly_uncharacterized,_incl._Putative_rhamnosyl_transferase,_and_Domain_of_unknown_function_DUF3859

description:
  Mostly uncharacterized, incl. Putative rhamnosyl transferase, and Domain of unknown function DUF3859


id: CL:3231
description: Mostly uncharacterized, incl. Domain of unknown function DUF3859, and Sulfotransferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3231_Mostly_uncharacterized,_incl._Domain_of_unknown_function_DUF3859,_and_Sulfotransferase_family


id: CL:3233
description: Mixed, incl. Domain of unknown function DUF3859, and Regulation of carbohydrate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3233_Mixed,_incl._Domain_of_unknown_function_DUF3859,_and_Regulation_of_carbohydrate_metabolic_process


id: CL:3235
description: Mixed, incl. Domain of unknown function DUF3859, and SH3-like domain, bacterial-type
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3235_Mixed,_incl._Domain_of_unknown_function_DUF3859,_and_SH3-like_domain,_bacterial-type


id: CL:3262
description: Mixed, incl. Putative rhamnosyl transferase, and Signaling receptor binding
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3262_Mixed,_incl._Putative_rhamnosyl_transferase,_and_Signaling_receptor_binding


id: CL:3278
description: Mixed, incl. Response to organic substance, and Potassium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3278_Mixed,_incl._Response_to_organic_substance,_and_Potassium_ion_transport


id: CL:3279
description: Mixed, incl. Response to organic substance, and Antibiotic metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3279_Mixed,_incl._Response_to_organic_substance,_and_Antibiotic_metabolic_process


id: CL:3290
description: Mixed, incl. Cation/H+ exchanger, and Regulation of metal ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3290_Mixed,_incl._Cation/H+_exchanger,_and_Regulation_of_metal_ion_transport


id: CL:3306
description: Mixed, incl. Major facilitator superfamily domain, and Methylglyoxal catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3306_Mixed,_incl._Major_facilitator_superfamily_domain,_and_Methylglyoxal_catabolic_process


id: CL:3308
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3308_Mostly_uncharacterized,_incl._Mechanosensitive_ion_channel_MscS,_conserved_site,_and_ATPase_family_associated_with_various_cellular_activities_(AAA)

description:
  Mostly uncharacterized, incl. Mechanosensitive ion channel MscS, conserved site, and ATPase family associated with various cellular activities (AAA)


id: CL:3312
description: Mixed, incl. ATPase family associated with various cellular activities (AAA), and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3312_Mixed,_incl._ATPase_family_associated_with_various_cellular_activities_(AAA),_and_Coiled_coil


id: CL:3332
description: Mixed, incl. Major facilitator superfamily domain, and Methylglyoxal catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3332_Mixed,_incl._Major_facilitator_superfamily_domain,_and_Methylglyoxal_catabolic_process


id: CL:3334
description: Mixed, incl. Methylglyoxal catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3334_Mixed,_incl._Methylglyoxal_catabolic_process


id: CL:3353
description: Mostly uncharacterized, incl. Aminopeptidase activity, and Trypsin-like serine protease
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3353_Mostly_uncharacterized,_incl._Aminopeptidase_activity,_and_Trypsin-like_serine_protease


id: CL:3354
description: Mostly uncharacterized, incl. Trypsin-like serine protease, and Protein of unknown function DUF805
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3354_Mostly_uncharacterized,_incl._Trypsin-like_serine_protease,_and_Protein_of_unknown_function_DUF805


id: CL:3355
description: Mostly uncharacterized, incl. Identical protein binding, and LOG family
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3355_Mostly_uncharacterized,_incl._Identical_protein_binding,_and_LOG_family


id: CL:3357
description: Mixed, incl. YCII-related, and DUF465 superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3357_Mixed,_incl._YCII-related,_and_DUF465_superfamily


id: CL:337
description: Mixed, incl. RNA catabolic process, and Pseudouridine synthase, RluA-like, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:337_Mixed,_incl._RNA_catabolic_process,_and_Pseudouridine_synthase,_RluA-like,_conserved_site


id: CL:338
description: Mixed, incl. Pseudouridine synthase, RluA-like, conserved site, and Peptidyl-proline modification
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:338_Mixed,_incl._Pseudouridine_synthase,_RluA-like,_conserved_site,_and_Peptidyl-proline_modification


id: CL:3386
description: Trypsin-like serine protease, and Protein of unknown function DUF805
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3386_Trypsin-like_serine_protease,_and_Protein_of_unknown_function_DUF805


id: CL:3395
description: Mixed, incl. TRAP transporter solute receptor DctP, and Interstrand cross-link repair
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3395_Mixed,_incl._TRAP_transporter_solute_receptor_DctP,_and_Interstrand_cross-link_repair


id: CL:3397
description: ChlI/MoxR, AAA lid domain, and Class I glutamine amidotransferase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3397_ChlI/MoxR,_AAA_lid_domain,_and_Class_I_glutamine_amidotransferase-like


id: CL:340
description: Mixed, incl. Pseudouridine synthase, RluC/RluD, and GTP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:340_Mixed,_incl._Pseudouridine_synthase,_RluC/RluD,_and_GTP_binding_domain


id: CL:3418
description: Mixed, incl. Cyclo-ligase activity, and L-amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3418_Mixed,_incl._Cyclo-ligase_activity,_and_L-amino_acid_transport


id: CL:3430
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3430_Mixed,_incl._Peptidoglycan_L,D-transpeptidase_activity,_and_Hedgehog_signalling/DD-peptidase_zinc-binding_domain_superfamily

description:
  Mixed, incl. Peptidoglycan L,D-transpeptidase activity, and Hedgehog signalling/DD-peptidase zinc-binding domain superfamily


id: CL:3431
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3431_Mixed,_incl._Peptidoglycan_L,D-transpeptidase_activity,_and_Hedgehog_signalling/DD-peptidase_zinc-binding_domain_superfamily

description:
  Mixed, incl. Peptidoglycan L,D-transpeptidase activity, and Hedgehog signalling/DD-peptidase zinc-binding domain superfamily


id: CL:3432
description: Peptidoglycan L,D-transpeptidase activity, and CAP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3432_Peptidoglycan_L,D-transpeptidase_activity,_and_CAP_domain


id: CL:3443
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3443_Mixed,_incl._Thioesterase-like_superfamily,_and_Hedgehog_signalling/DD-peptidase_zinc-binding_domain_superfamily

description:
  Mixed, incl. Thioesterase-like superfamily, and Hedgehog signalling/DD-peptidase zinc-binding domain superfamily


id: CL:3453
description: Mixed, incl. Invasion protein B, and Leucyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3453_Mixed,_incl._Invasion_protein_B,_and_Leucyltransferase_activity


id: CL:3474
description: Mixed, incl. FAD-binding domain, and Zinc finger, DksA/TraR C4-type
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3474_Mixed,_incl._FAD-binding_domain,_and_Zinc_finger,_DksA/TraR_C4-type


id: CL:3475
description: Mixed, incl. FAD-binding domain, and Zinc finger, DksA/TraR C4-type
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3475_Mixed,_incl._FAD-binding_domain,_and_Zinc_finger,_DksA/TraR_C4-type


id: CL:3477
description: Mixed, incl. Protein of unknown function DUF2927, and ClpA/B family
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3477_Mixed,_incl._Protein_of_unknown_function_DUF2927,_and_ClpA/B_family


id: CL:3494
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3494_Mixed,_incl._Glutathione_transferase_activity,_and_Regulation_of_DNA-templated_transcription,_elongation

description:
  Mixed, incl. Glutathione transferase activity, and Regulation of DNA-templated transcription, elongation


id: CL:3504
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3504_Mixed,_incl._Short-chain_fatty_acyl_coenzyme_A_regulators,_C-terminal,_and_Tetracycline_resistance_protein_TetA/multidrug_resistance_protein_MdtG

description:
  Mixed, incl. Short-chain fatty acyl coenzyme A regulators, C-terminal, and Tetracycline resistance protein TetA/multidrug resistance protein MdtG


id: CL:3516
description: Mostly uncharacterized, incl. DNA integration, and Queuosine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3516_Mostly_uncharacterized,_incl._DNA_integration,_and_Queuosine_biosynthesis


id: CL:3517
description: Mostly uncharacterized, incl. Queuosine biosynthesis, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3517_Mostly_uncharacterized,_incl._Queuosine_biosynthesis,_and_DNA_integration


id: CL:3519
description: Mixed, incl. DNA integration, and Extensin-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3519_Mixed,_incl._DNA_integration,_and_Extensin-like,_C-terminal


id: CL:3539
description: Mixed, incl. AsmA-like, C-terminal, and Peroxiredoxin, AhpC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3539_Mixed,_incl._AsmA-like,_C-terminal,_and_Peroxiredoxin,_AhpC-type


id: CL:3555
description: Mixed, incl. DNA integration, and Transporter associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3555_Mixed,_incl._DNA_integration,_and_Transporter_associated_domain


id: CL:3569
description: Mixed, incl. Fructokinase activity, and Prokaryotic cytochrome b561
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3569_Mixed,_incl._Fructokinase_activity,_and_Prokaryotic_cytochrome_b561


id: CL:3572
description: Mixed, incl. Protein of unknown function DUF2927, and Band 7/SPFH domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3572_Mixed,_incl._Protein_of_unknown_function_DUF2927,_and_Band_7/SPFH_domain_superfamily


id: CL:361
description: Exoribonuclease activity, and Ribonuclease E/G
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:361_Exoribonuclease_activity,_and_Ribonuclease_E/G


id: CL:3612
description: Mixed, incl. Signaling, and Flagellar assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3612_Mixed,_incl._Signaling,_and_Flagellar_assembly


id: CL:3613
description: Mixed, incl. Signaling, and Flagellar assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3613_Mixed,_incl._Signaling,_and_Flagellar_assembly


id: CL:3614
description: Mixed, incl. Signaling, and Flagellar assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3614_Mixed,_incl._Signaling,_and_Flagellar_assembly


id: CL:3615
description: Mixed, incl. Signaling, and Flagellar assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3615_Mixed,_incl._Signaling,_and_Flagellar_assembly


id: CL:3616
description: Mixed, incl. Signaling, and Flagellar assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3616_Mixed,_incl._Signaling,_and_Flagellar_assembly


id: CL:3619
description: Signaling, and Flagellar assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3619_Signaling,_and_Flagellar_assembly


id: CL:3620
description: Signal transduction, and Flagellar assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3620_Signal_transduction,_and_Flagellar_assembly


id: CL:3621
description: Signal transduction, and Flagellar assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3621_Signal_transduction,_and_Flagellar_assembly


id: CL:3623
description: Signal transduction, and Peptidyl-histidine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3623_Signal_transduction,_and_Peptidyl-histidine_modification


id: CL:3625
description: Signal transduction, and Peptidyl-histidine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3625_Signal_transduction,_and_Peptidyl-histidine_modification


id: CL:3626
description: Protein histidine kinase activity, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3626_Protein_histidine_kinase_activity,_and_Bacterial_chemotaxis


id: CL:3628
description: Protein histidine kinase activity, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3628_Protein_histidine_kinase_activity,_and_Bacterial_chemotaxis


id: CL:3631
description: Protein histidine kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3631_Protein_histidine_kinase_activity


id: CL:3634
description: His Kinase A (phosphoacceptor) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3634_His_Kinase_A_(phosphoacceptor)_domain


id: CL:3637
description: PAS-associated, C-terminal, and PAS fold
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3637_PAS-associated,_C-terminal,_and_PAS_fold


id: CL:3667
description: CheW-like domain, and carboxyl-O-methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3667_CheW-like_domain,_and_carboxyl-O-methyltransferase_activity


id: CL:3689
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3689_Two-component_regulatory_system,_and_Motif_C-terminal_to_PAS_motifs_(likely_to_contribute_to_PAS_structural_domain)

description:
  Two-component regulatory system, and Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)


id: CL:3692
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3692_Two-component_regulatory_system,_and_Motif_C-terminal_to_PAS_motifs_(likely_to_contribute_to_PAS_structural_domain)

description:
  Two-component regulatory system, and Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)


id: CL:3693
description: Two-component regulatory system, and PAS fold-3
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3693_Two-component_regulatory_system,_and_PAS_fold-3


id: CL:3702
description: OmpR/PhoB-type DNA-binding domain, and PAS fold-4
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3702_OmpR/PhoB-type_DNA-binding_domain,_and_PAS_fold-4


id: CL:372
description: Mixed, incl. RF-1 domain, and Ribosomal large subunit binding
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:372_Mixed,_incl._RF-1_domain,_and_Ribosomal_large_subunit_binding


id: CL:3724
description: Sigma-54 interaction domain, conserved site, and DUS-like, FMN-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3724_Sigma-54_interaction_domain,_conserved_site,_and_DUS-like,_FMN-binding_domain


id: CL:3741
description: Bacterial-type flagellum, and Bacterial-type flagellum organization
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3741_Bacterial-type_flagellum,_and_Bacterial-type_flagellum_organization


id: CL:3744
description: Bacterial-type flagellum, and Bacterial-type flagellum organization
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3744_Bacterial-type_flagellum,_and_Bacterial-type_flagellum_organization


id: CL:3745
description: Bacterial-type flagellum, and Bacterial flagellum biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3745_Bacterial-type_flagellum,_and_Bacterial_flagellum_biogenesis


id: CL:3746
description: Bacterial-type flagellum basal body, and Bacterial flagellum biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3746_Bacterial-type_flagellum_basal_body,_and_Bacterial_flagellum_biogenesis


id: CL:3748
description: Bacterial-type flagellum basal body, rod
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3748_Bacterial-type_flagellum_basal_body,_rod


id: CL:3762
description: Bacterial-type flagellum assembly, and Bacterial flagellum biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3762_Bacterial-type_flagellum_assembly,_and_Bacterial_flagellum_biogenesis


id: CL:3771
description: SpoA-like superfamily, and Bacterial-type flagellum hook
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3771_SpoA-like_superfamily,_and_Bacterial-type_flagellum_hook


id: CL:3780
description: Mixed, incl. Bacterial-type flagellum, and STAS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3780_Mixed,_incl._Bacterial-type_flagellum,_and_STAS_domain


id: CL:3782
description: Mixed, incl. Cytoskeletal motor activity, and Bacterial-type flagellum hook
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3782_Mixed,_incl._Cytoskeletal_motor_activity,_and_Bacterial-type_flagellum_hook


id: CL:3809
description: Mixed, incl. mRNA binding, and Flagellin, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3809_Mixed,_incl._mRNA_binding,_and_Flagellin,_C-terminal_domain


id: CL:382
description: Peptide deformylase, and methionyl-tRNA formyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:382_Peptide_deformylase,_and_methionyl-tRNA_formyltransferase_activity


id: CL:3822
description: Mixed, incl. MPN domain, and Horizontal gene transfer
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3822_Mixed,_incl._MPN_domain,_and_Horizontal_gene_transfer


id: CL:3824
description: Horizontal gene transfer, and MPN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3824_Horizontal_gene_transfer,_and_MPN_domain


id: CL:3843
description: Mixed, incl. Quorum sensing, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3843_Mixed,_incl._Quorum_sensing,_and_AAA_domain


id: CL:3863
description: Protein serine/threonine phosphatase activity, and Calcineurin-like phosphoesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3863_Protein_serine/threonine_phosphatase_activity,_and_Calcineurin-like_phosphoesterase


id: CL:3878
description: Mixed, incl. Transglycosylase SLT domain, and Peptidase M48
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3878_Mixed,_incl._Transglycosylase_SLT_domain,_and_Peptidase_M48


id: CL:3891
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3891_Mixed,_incl._Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_Bacterial_periplasmic_substrate-binding_proteins

description:
  Mixed, incl. Amino acid ABC transporter, permease protein, 3-TM domain, and Bacterial periplasmic substrate-binding proteins


id: CL:3892
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3892_Mixed,_incl._Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_Bacterial_periplasmic_substrate-binding_proteins

description:
  Mixed, incl. Amino acid ABC transporter, permease protein, 3-TM domain, and Bacterial periplasmic substrate-binding proteins


id: CL:3894
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3894_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_Bacterial_periplasmic_substrate-binding_proteins

description:
  Amino acid ABC transporter, permease protein, 3-TM domain, and Bacterial periplasmic substrate-binding proteins


id: CL:3919
description: Mixed, incl. Autoinducer binding domain, and Quorum sensing
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3919_Mixed,_incl._Autoinducer_binding_domain,_and_Quorum_sensing


id: CL:392
description: Mixed, incl. RNA (C5-cytosine) methyltransferase, and Potassium transport
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:392_Mixed,_incl._RNA_(C5-cytosine)_methyltransferase,_and_Potassium_transport


id: CL:3932
description: Mixed, incl. Phosphate ion transport, and Ppx/GppA phosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3932_Mixed,_incl._Phosphate_ion_transport,_and_Ppx/GppA_phosphatase


id: CL:3933
description: Mixed, incl. Phosphate ion transport, and Ppx/GppA phosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3933_Mixed,_incl._Phosphate_ion_transport,_and_Ppx/GppA_phosphatase


id: CL:3935
description: Ppx/GppA phosphatase, and Polyphosphate kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3935_Ppx/GppA_phosphatase,_and_Polyphosphate_kinase_activity


id: CL:3959
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3959_Mixed,_incl._Sulfur_amino_acid_transmembrane_transporter_activity,_and_Monocarboxylic_acid_transmembrane_transporter_activity

description:
  Mixed, incl. Sulfur amino acid transmembrane transporter activity, and Monocarboxylic acid transmembrane transporter activity


id: CL:3971
description: Mixed, incl. Organic phosphonate transport, and Transposase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3971_Mixed,_incl._Organic_phosphonate_transport,_and_Transposase


id: CL:3972
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3972_Mixed,_incl._Organic_phosphonate_transport,_and_ABC_transporter,_phosphonate,_periplasmic_substrate-binding_protein

description:
  Mixed, incl. Organic phosphonate transport, and ABC transporter, phosphonate, periplasmic substrate-binding protein


id: CL:3974
description: Organic phosphonate transport, and HAD-hyrolase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3974_Organic_phosphonate_transport,_and_HAD-hyrolase-like


id: CL:3990
description: Mixed, incl. Histidine Phosphotransfer domain, and Extensin-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:3990_Mixed,_incl._Histidine_Phosphotransfer_domain,_and_Extensin-like,_C-terminal


id: CL:4002
description: Mixed, incl. ParB/Sulfiredoxin, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4002_Mixed,_incl._ParB/Sulfiredoxin,_and_AAA_domain


id: CL:4005
description: Mixed, incl. PIN domain, and YefM-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4005_Mixed,_incl._PIN_domain,_and_YefM-like_superfamily


id: CL:4028
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4028_Mostly_uncharacterized,_incl._Hemolysin-type_calcium-binding_conserved_site,_and_Acyl-CoA_N-acyltransferase

description:
  Mostly uncharacterized, incl. Hemolysin-type calcium-binding conserved site, and Acyl-CoA N-acyltransferase


id: CL:4030
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4030_Mostly_uncharacterized,_incl._Biological_process_involved_in_interspecies_interaction_between_organisms,_and_Amidase_activity

description:
  Mostly uncharacterized, incl. Biological process involved in interspecies interaction between organisms, and Amidase activity


id: CL:4032
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4032_Mostly_uncharacterized,_incl._Biological_process_involved_in_interspecies_interaction_between_organisms,_and_Amidase_activity

description:
  Mostly uncharacterized, incl. Biological process involved in interspecies interaction between organisms, and Amidase activity


id: CL:4035
description: Mostly uncharacterized, incl. Host cell, and Biological process involved in symbiotic interaction
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4035_Mostly_uncharacterized,_incl._Host_cell,_and_Biological_process_involved_in_symbiotic_interaction


id: CL:4039
description: Mixed, incl. Host cell, and Proteolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4039_Mixed,_incl._Host_cell,_and_Proteolysis


id: CL:407
description: Chaperone, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:407_Chaperone,_and_ATP-dependent_peptidase_activity


id: CL:4079
description: Mixed, incl. Hemolysin-type calcium-binding conserved site, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4079_Mixed,_incl._Hemolysin-type_calcium-binding_conserved_site,_and_Acetyltransferase_(GNAT)_domain


id: CL:4080
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4080_Mixed,_incl._Acetyltransferase_(GNAT)_domain,_and_Mechanosensitive_ion_channel_MscS,_archaea/bacteria_type

description:
  Mixed, incl. Acetyltransferase (GNAT) domain, and Mechanosensitive ion channel MscS, archaea/bacteria type


id: CL:4091
description: Hemolysin-type calcium-binding conserved site, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4091_Hemolysin-type_calcium-binding_conserved_site,_and_Glycosyl_transferases_group_1


id: CL:4105
description: Mostly uncharacterized, incl. Sporulation, and Butanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4105_Mostly_uncharacterized,_incl._Sporulation,_and_Butanoate_metabolism


id: CL:4106
description: Mostly uncharacterized, incl. Sporulation, and Butanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4106_Mostly_uncharacterized,_incl._Sporulation,_and_Butanoate_metabolism


id: CL:4108
description: Mostly uncharacterized, incl. Sporulation, and Transglutaminase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4108_Mostly_uncharacterized,_incl._Sporulation,_and_Transglutaminase-like


id: CL:4109
description: Mixed, incl. Sporulation, and CoA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4109_Mixed,_incl._Sporulation,_and_CoA-binding


id: CL:4110
description: Mixed, incl. Sporulation, and HWE histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4110_Mixed,_incl._Sporulation,_and_HWE_histidine_kinase


id: CL:4111
description: Mostly uncharacterized, incl. Uracil-DNA glycosylase-like, and RuvA domain 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4111_Mostly_uncharacterized,_incl._Uracil-DNA_glycosylase-like,_and_RuvA_domain_2-like


id: CL:4113
description: Mixed, incl. Uracil-DNA glycosylase-like, and RuvA domain 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4113_Mixed,_incl._Uracil-DNA_glycosylase-like,_and_RuvA_domain_2-like


id: CL:413
description: Protein folding chaperone, and ATPase regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:413_Protein_folding_chaperone,_and_ATPase_regulator_activity


id: CL:4133
description: Mixed, incl. HWE histidine kinase, and Crp-like helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4133_Mixed,_incl._HWE_histidine_kinase,_and_Crp-like_helix-turn-helix_domain


id: CL:4149
description: Mixed, incl. CoA-binding, and AI-2E family transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4149_Mixed,_incl._CoA-binding,_and_AI-2E_family_transporter


id: CL:4158
description: Mixed, incl. Transglutaminase-like, and Paraquat-inducible protein A
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4158_Mixed,_incl._Transglutaminase-like,_and_Paraquat-inducible_protein_A


id: CL:4161
description: Mixed, incl. Paraquat-inducible protein A, and Mce/MlaD
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4161_Mixed,_incl._Paraquat-inducible_protein_A,_and_Mce/MlaD


id: CL:4176
description: Transglutaminase-like, and Proteasome subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4176_Transglutaminase-like,_and_Proteasome_subunit


id: CL:4190
description: Mixed, incl. Butanoate metabolism, and Phasin
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4190_Mixed,_incl._Butanoate_metabolism,_and_Phasin


id: CL:4192
description: Mixed, incl. Phasin, and Haem peroxidase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4192_Mixed,_incl._Phasin,_and_Haem_peroxidase_superfamily


id: CL:4202
description: Mixed, incl. Patatin-like phospholipase, and Salmonella infection
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4202_Mixed,_incl._Patatin-like_phospholipase,_and_Salmonella_infection


id: CL:4214
description: Mixed, incl. Exopolysaccharide synthesis, ExoD, and Steroid degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4214_Mixed,_incl._Exopolysaccharide_synthesis,_ExoD,_and_Steroid_degradation


id: CL:4234
description: Mixed, incl. Styrene degradation, and glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4234_Mixed,_incl._Styrene_degradation,_and_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: CL:4236
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, and Styrene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4236_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity,_and_Styrene_degradation


id: CL:4238
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, and Amidase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4238_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity,_and_Amidase


id: CL:4264
description: Mixed, incl. Pirin, and Phospholipase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4264_Mixed,_incl._Pirin,_and_Phospholipase_activity


id: CL:4276
description: Thiamine diphosphate metabolic process, and SpoU rRNA Methylase family
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4276_Thiamine_diphosphate_metabolic_process,_and_SpoU_rRNA_Methylase_family


id: CL:4279
description: Thiamine diphosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4279_Thiamine_diphosphate_metabolic_process


id: CL:4302
description: Mostly uncharacterized, incl. GntR, C-terminal, and Transcription regulator MerR, DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4302_Mostly_uncharacterized,_incl._GntR,_C-terminal,_and_Transcription_regulator_MerR,_DNA_binding


id: CL:4303
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4303_Mostly_uncharacterized,_incl._Transcription_regulator_MerR,_DNA_binding,_and_1,4-dihydroxy-2-naphthoyl-CoA_thioesterase_activity

description:
  Mostly uncharacterized, incl. Transcription regulator MerR, DNA binding, and 1,4-dihydroxy-2-naphthoyl-CoA thioesterase activity


id: CL:4304
description: Mixed, incl. Carboxypeptidase, and Septation
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4304_Mixed,_incl._Carboxypeptidase,_and_Septation


id: CL:4306
description: Mixed, incl. Carboxypeptidase, and SpoU rRNA Methylase family
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4306_Mixed,_incl._Carboxypeptidase,_and_SpoU_rRNA_Methylase_family


id: CL:4322
description: Mixed, incl. Septation, and EamA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4322_Mixed,_incl._Septation,_and_EamA_domain


id: CL:4332
description: Transcription regulator MerR, DNA binding, and 1,4-dihydroxy-2-naphthoyl-CoA thioesterase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4332_Transcription_regulator_MerR,_DNA_binding,_and_1,4-dihydroxy-2-naphthoyl-CoA_thioesterase_activity


id: CL:4350
description: Mixed, incl. GntR, C-terminal, and Diaminopimelate biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4350_Mixed,_incl._GntR,_C-terminal,_and_Diaminopimelate_biosynthesis


id: CL:4351
description: Mixed, incl. GntR, C-terminal, and Diaminopimelate biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4351_Mixed,_incl._GntR,_C-terminal,_and_Diaminopimelate_biosynthesis


id: CL:4352
description: Mixed, incl. Diaminopimelate biosynthesis, and LOG family
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4352_Mixed,_incl._Diaminopimelate_biosynthesis,_and_LOG_family


id: CL:4367
description: GntR, C-terminal, and Outer membrane protein, bacterial
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4367_GntR,_C-terminal,_and_Outer_membrane_protein,_bacterial


id: CL:4379
description: Mixed, incl. Adenosine deaminase activity, and Lipoprotein metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4379_Mixed,_incl._Adenosine_deaminase_activity,_and_Lipoprotein_metabolic_process


id: CL:439
description: Peptidase M41, and Stomatin/HflK family
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:439_Peptidase_M41,_and_Stomatin/HflK_family


id: CL:4393
description: Mostly uncharacterized, incl. Type 1 protein exporter, and Domain of unknown function DUF427
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4393_Mostly_uncharacterized,_incl._Type_1_protein_exporter,_and_Domain_of_unknown_function_DUF427


id: CL:4394
description: Mostly uncharacterized, incl. Domain of unknown function DUF427, and Peptidase M24
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4394_Mostly_uncharacterized,_incl._Domain_of_unknown_function_DUF427,_and_Peptidase_M24


id: CL:4395
description: Mostly uncharacterized, incl. GMC oxidoreductase, and Sulfotransferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4395_Mostly_uncharacterized,_incl._GMC_oxidoreductase,_and_Sulfotransferase_family


id: CL:4396
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4396_Mixed,_incl._DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity,_and_Protein_kinase-like_domain_superfamily

description:
  Mixed, incl. DNA topoisomerase type I (single strand cut, ATP-independent) activity, and Protein kinase-like domain superfamily


id: CL:4409
description: Mixed, incl. GMC oxidoreductase, and Sulfotransferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4409_Mixed,_incl._GMC_oxidoreductase,_and_Sulfotransferase_family


id: CL:4420
description: Domain of unknown function DUF427, and Peptidase M24
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4420_Domain_of_unknown_function_DUF427,_and_Peptidase_M24


id: CL:4430
description: Type 1 protein exporter, and MIP18 family-like
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4430_Type_1_protein_exporter,_and_MIP18_family-like


id: CL:4449
description: Mostly uncharacterized, incl. Signal, and GNAT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4449_Mostly_uncharacterized,_incl._Signal,_and_GNAT_domain


id: CL:4450
description: Mostly uncharacterized, incl. Winged helix-like DNA-binding domain superfamily, and YHYH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4450_Mostly_uncharacterized,_incl._Winged_helix-like_DNA-binding_domain_superfamily,_and_YHYH_domain


id: CL:4451
description: Mostly uncharacterized, incl. YHYH domain, and Alpha/Beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4451_Mostly_uncharacterized,_incl._YHYH_domain,_and_Alpha/Beta_hydrolase_fold


id: CL:4452
description: Mostly uncharacterized, incl. Alpha/Beta hydrolase fold, and Nitroreductase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4452_Mostly_uncharacterized,_incl._Alpha/Beta_hydrolase_fold,_and_Nitroreductase-like


id: CL:4453
description: Mostly uncharacterized, incl. Alpha/Beta hydrolase fold, and Nitroreductase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4453_Mostly_uncharacterized,_incl._Alpha/Beta_hydrolase_fold,_and_Nitroreductase-like


id: CL:4454
description: Mostly uncharacterized, incl. Serine aminopeptidase, S33, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4454_Mostly_uncharacterized,_incl._Serine_aminopeptidase,_S33,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:4455
description: Mostly uncharacterized, incl. Serine aminopeptidase, S33, and Glucan biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4455_Mostly_uncharacterized,_incl._Serine_aminopeptidase,_S33,_and_Glucan_biosynthetic_process


id: CL:4456
description: Mixed, incl. Glucan biosynthetic process, and Butanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4456_Mixed,_incl._Glucan_biosynthetic_process,_and_Butanoate_metabolism


id: CL:4458
description: Mixed, incl. Glucan biosynthetic process, and Esterase, PHB depolymerase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4458_Mixed,_incl._Glucan_biosynthetic_process,_and_Esterase,_PHB_depolymerase


id: CL:4461
description: Mixed, incl. Glucan biosynthetic process, and Domain of unknown function DUF302
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4461_Mixed,_incl._Glucan_biosynthetic_process,_and_Domain_of_unknown_function_DUF302


id: CL:4490
description: Serine aminopeptidase, S33, and Activator of Hsp90 ATPase homolog 1-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4490_Serine_aminopeptidase,_S33,_and_Activator_of_Hsp90_ATPase_homolog_1-like_protein


id: CL:450
description: Mixed, incl. PDZ domain 6, and Cytidylyltransferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:450_Mixed,_incl._PDZ_domain_6,_and_Cytidylyltransferase_family


id: CL:4506
description: Mixed, incl. Potassium transport, and Sulfur amino acid transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4506_Mixed,_incl._Potassium_transport,_and_Sulfur_amino_acid_transmembrane_transporter_activity


id: CL:4518
description: Mixed, incl. Nitroreductase, and Oxalate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4518_Mixed,_incl._Nitroreductase,_and_Oxalate_catabolic_process


id: CL:4536
description: Mixed, incl. Steroid degradation, and ArgJ-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4536_Mixed,_incl._Steroid_degradation,_and_ArgJ-like_domain_superfamily


id: CL:4547
description: Mostly uncharacterized, incl. YHYH domain, and Secondary active transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4547_Mostly_uncharacterized,_incl._YHYH_domain,_and_Secondary_active_transmembrane_transporter_activity


id: CL:4548
description: Mixed, incl. YHYH domain, and GNAT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4548_Mixed,_incl._YHYH_domain,_and_GNAT_domain


id: CL:4550
description: Mixed, incl. YHYH domain, and Lysine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4550_Mixed,_incl._YHYH_domain,_and_Lysine_biosynthesis


id: CL:4551
description: Mixed, incl. YHYH domain, and Putative metallopeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4551_Mixed,_incl._YHYH_domain,_and_Putative_metallopeptidase


id: CL:4553
description: Mixed, incl. Putative metallopeptidase, and Methyltransferase domain 25
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4553_Mixed,_incl._Putative_metallopeptidase,_and_Methyltransferase_domain_25


id: CL:4566
description: YbhB/YbcL, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4566_YbhB/YbcL,_and_Acetyltransferase_(GNAT)_domain


id: CL:4577
description: Mixed, incl. Chromosome partition, and Polyamine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4577_Mixed,_incl._Chromosome_partition,_and_Polyamine_biosynthetic_process


id: CL:4599
description: Mixed, incl. Acetyltransferase (GNAT) family, and Flavin reductase like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4599_Mixed,_incl._Acetyltransferase_(GNAT)_family,_and_Flavin_reductase_like_domain


id: CL:4617
description: Mixed, incl. Symporter activity, and Interstrand cross-link repair
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4617_Mixed,_incl._Symporter_activity,_and_Interstrand_cross-link_repair


id: CL:4632
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4632_Mostly_uncharacterized,_incl._Cryptochrome/DNA_photolyase,_FAD-binding_domain-like_superfamily,_and_DinB_superfamily

description:
  Mostly uncharacterized, incl. Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily, and DinB superfamily


id: CL:4633
description: Mostly uncharacterized, incl. Short chain dehydrogenase, and Flavin containing amine oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4633_Mostly_uncharacterized,_incl._Short_chain_dehydrogenase,_and_Flavin_containing_amine_oxidoreductase


id: CL:4635
description: Mixed, incl. Flavin containing amine oxidoreductase, and Symporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4635_Mixed,_incl._Flavin_containing_amine_oxidoreductase,_and_Symporter_activity


id: CL:4656
description: Mixed, incl. DinB superfamily, and DNA photolyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4656_Mixed,_incl._DinB_superfamily,_and_DNA_photolyase_activity


id: CL:4657
description: Mixed, incl. DinB superfamily, and Xylene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4657_Mixed,_incl._DinB_superfamily,_and_Xylene_degradation


id: CL:4666
description: Mixed, incl. DNA photolyase activity, and alanyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4666_Mixed,_incl._DNA_photolyase_activity,_and_alanyl-tRNA_aminoacylation


id: CL:4675
description: Mostly uncharacterized, incl. Patched family, and Extensin-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4675_Mostly_uncharacterized,_incl._Patched_family,_and_Extensin-like,_C-terminal


id: CL:4677
description: Mixed, incl. Extensin-like, C-terminal, and YceI-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4677_Mixed,_incl._Extensin-like,_C-terminal,_and_YceI-like_domain


id: CL:470
description: Homologous recombination, and ATP-dependent activity, acting on DNA
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:470_Homologous_recombination,_and_ATP-dependent_activity,_acting_on_DNA


id: CL:4700
description: Mixed, incl. beta-Lactam resistance, and ABC transporters
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4700_Mixed,_incl._beta-Lactam_resistance,_and_ABC_transporters


id: CL:4701
description: Mixed, incl. beta-Lactam resistance, and Lipoprotein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4701_Mixed,_incl._beta-Lactam_resistance,_and_Lipoprotein_transport


id: CL:4702
description: Mixed, incl. Acriflavin resistance protein, and HlyD family secretion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4702_Mixed,_incl._Acriflavin_resistance_protein,_and_HlyD_family_secretion_protein


id: CL:4704
description: Mixed, incl. Acriflavin resistance protein, and HlyD family secretion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4704_Mixed,_incl._Acriflavin_resistance_protein,_and_HlyD_family_secretion_protein


id: CL:4706
description: Acriflavin resistance protein, and HlyD family secretion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4706_Acriflavin_resistance_protein,_and_HlyD_family_secretion_protein


id: CL:4708
description: Efflux transmembrane transporter activity, and Patched family
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4708_Efflux_transmembrane_transporter_activity,_and_Patched_family


id: CL:472
description: DNA replication, and ATP-dependent activity, acting on DNA
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:472_DNA_replication,_and_ATP-dependent_activity,_acting_on_DNA


id: CL:473
description: Homologous recombination, and Nucleotide excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:473_Homologous_recombination,_and_Nucleotide_excision_repair


id: CL:4733
description: Mixed, incl. Ferritin-like, and Conserved hypothetical protein CHP02453
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4733_Mixed,_incl._Ferritin-like,_and_Conserved_hypothetical_protein_CHP02453


id: CL:4748
description: Mixed, incl. Uracil-DNA glycosylase-like, and Glutathione S-transferase, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4748_Mixed,_incl._Uracil-DNA_glycosylase-like,_and_Glutathione_S-transferase,_C-terminal_domain


id: CL:4758
description: Mixed, incl. Lipoprotein transport, and ABC transporter, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4758_Mixed,_incl._Lipoprotein_transport,_and_ABC_transporter,_BtuC-like


id: CL:4759
description: Mixed, incl. Lipoprotein transport, and Protein of unknown function DUF3299
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4759_Mixed,_incl._Lipoprotein_transport,_and_Protein_of_unknown_function_DUF3299


id: CL:476
description: DNA repair, and DNA helicase, ATP-dependent, RecQ type
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:476_DNA_repair,_and_DNA_helicase,_ATP-dependent,_RecQ_type


id: CL:4761
description: Lipoprotein transport, and Membrane component of ABC transporter, predicted
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4761_Lipoprotein_transport,_and_Membrane_component_of_ABC_transporter,_predicted


id: CL:4773
description: Protein of unknown function DUF3299, and MacB-like periplasmic core domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4773_Protein_of_unknown_function_DUF3299,_and_MacB-like_periplasmic_core_domain


id: CL:478
description: DNA helicase, ATP-dependent, RecQ type, and DNA-directed DNA polymerase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:478_DNA_helicase,_ATP-dependent,_RecQ_type,_and_DNA-directed_DNA_polymerase


id: CL:4783
description: ABC transporter, BtuC-like, and Zinc-uptake complex component A periplasmic
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4783_ABC_transporter,_BtuC-like,_and_Zinc-uptake_complex_component_A_periplasmic


id: CL:4806
description: Mostly uncharacterized, incl. Arginine metabolic process, and Phospholipid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4806_Mostly_uncharacterized,_incl._Arginine_metabolic_process,_and_Phospholipid_transport


id: CL:4808
description: Mixed, incl. Phospholipid transport, and Ornithine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4808_Mixed,_incl._Phospholipid_transport,_and_Ornithine_metabolic_process


id: CL:4809
description: Mixed, incl. Phospholipid transport, and Ornithine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4809_Mixed,_incl._Phospholipid_transport,_and_Ornithine_metabolic_process


id: CL:4811
description: Ornithine metabolic process, and Crp-like helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4811_Ornithine_metabolic_process,_and_Crp-like_helix-turn-helix_domain


id: CL:4830
description: Mixed, incl. STAS domain, and Sulphur transport
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4830_Mixed,_incl._STAS_domain,_and_Sulphur_transport


id: CL:4842
description: Mostly uncharacterized, incl. Alanine racemase activity, and Sodium/calcium exchanger protein
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4842_Mostly_uncharacterized,_incl._Alanine_racemase_activity,_and_Sodium/calcium_exchanger_protein


id: CL:4843
description: Mixed, incl. Sodium/calcium exchanger protein, and UspA
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4843_Mixed,_incl._Sodium/calcium_exchanger_protein,_and_UspA


id: CL:4856
description: Mixed, incl. Alanine racemase activity, and Innate Immune System
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4856_Mixed,_incl._Alanine_racemase_activity,_and_Innate_Immune_System


id: CL:4867
description: Mixed, incl. Tetrapyrrole biosynthetic process, and Carotenoid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4867_Mixed,_incl._Tetrapyrrole_biosynthetic_process,_and_Carotenoid_biosynthesis


id: CL:4869
description: Mixed, incl. Photosynthesis, and Carotenoid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4869_Mixed,_incl._Photosynthesis,_and_Carotenoid_biosynthesis


id: CL:4870
description: Photosynthesis, and Carotenoid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4870_Photosynthesis,_and_Carotenoid_biosynthesis


id: CL:4873
description: Photosynthesis, and Carotenoid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4873_Photosynthesis,_and_Carotenoid_biosynthesis


id: CL:4874
description: Bacteriochlorophyll metabolic process, and Chlorophyll binding
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4874_Bacteriochlorophyll_metabolic_process,_and_Chlorophyll_binding


id: CL:4875
description: Bacteriochlorophyll metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4875_Bacteriochlorophyll_metabolic_process


id: CL:4877
description: Nitrogenase/oxidoreductase, component 1, and NifH/frxC family
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4877_Nitrogenase/oxidoreductase,_component_1,_and_NifH/frxC_family


id: CL:4897
description: Magnesium chelatase activity, and Methyltransferase small domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4897_Magnesium_chelatase_activity,_and_Methyltransferase_small_domain


id: CL:4907
description: Chlorophyll binding, and Bacteriochlorophyll metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4907_Chlorophyll_binding,_and_Bacteriochlorophyll_metabolic_process


id: CL:4920
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4920_Mixed,_incl._Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_one_atom_of_oxygen,_and_Toxin_metabolic_process

description:
  Mixed, incl. Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen, and Toxin metabolic process


id: CL:4952
description: Carotenoid biosynthesis, and ABC-2 type transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4952_Carotenoid_biosynthesis,_and_ABC-2_type_transporter


id: CL:4954
description: Mixed, incl. Fatty acid hydroxylase, and ABC-2 type transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4954_Mixed,_incl._Fatty_acid_hydroxylase,_and_ABC-2_type_transporter


id: CL:4964
description: Squalene/phytoene synthase, and Carotenoid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4964_Squalene/phytoene_synthase,_and_Carotenoid_biosynthesis


id: CL:4974
description: Quinone metabolic process, and Polyprenyl synthetase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4974_Quinone_metabolic_process,_and_Polyprenyl_synthetase


id: CL:4977
description: Ubiquinone biosynthesis, and Ubiquinone biosynthesis hydroxylase UbiH/COQ6
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:4977_Ubiquinone_biosynthesis,_and_Ubiquinone_biosynthesis_hydroxylase_UbiH/COQ6


id: CL:5001
description: Mixed, incl. Cobalamin metabolic process, and Helix_turn_helix ASNC type
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5001_Mixed,_incl._Cobalamin_metabolic_process,_and_Helix_turn_helix_ASNC_type


id: CL:5002
description: Mixed, incl. Cobalamin metabolic process, and Helix_turn_helix ASNC type
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5002_Mixed,_incl._Cobalamin_metabolic_process,_and_Helix_turn_helix_ASNC_type


id: CL:5003
description: Mixed, incl. Cobalamin metabolic process, and Sulfate assimilation
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5003_Mixed,_incl._Cobalamin_metabolic_process,_and_Sulfate_assimilation


id: CL:5004
description: Cobalamin metabolic process, and Sulfate assimilation
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5004_Cobalamin_metabolic_process,_and_Sulfate_assimilation


id: CL:5029
description: Cobalamin transport, and cob(I)yrinic acid a,c-diamide adenosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5029_Cobalamin_transport,_and_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: CL:5047
description: Porphyrin biosynthesis, and Sulfate assimilation
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5047_Porphyrin_biosynthesis,_and_Sulfate_assimilation


id: CL:5049
description: Sulfate assimilation, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5049_Sulfate_assimilation,_and_AAA_domain


id: CL:506
description: DNA helicase complex, and DNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:506_DNA_helicase_complex,_and_DNA_ligase_activity


id: CL:5074
description: Mixed, incl. NYN domain, and HNH nucleases
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5074_Mixed,_incl._NYN_domain,_and_HNH_nucleases


id: CL:5105
description: Mixed, incl. Peptidase C26, and PEP-utilising enzyme, mobile domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5105_Mixed,_incl._Peptidase_C26,_and_PEP-utilising_enzyme,_mobile_domain


id: CL:5115
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5115_Mixed,_incl._Regulation_of_nitrogen_utilization,_and_Na+-dependent_bicarbonate_transporter_superfamily

description:
  Mixed, incl. Regulation of nitrogen utilization, and Na+-dependent bicarbonate transporter superfamily


id: CL:5117
description: Regulation of nitrogen utilization, and Na+-dependent bicarbonate transporter superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5117_Regulation_of_nitrogen_utilization,_and_Na+-dependent_bicarbonate_transporter_superfamily


id: CL:5135
description: Mixed, incl. Carnitine metabolic process, and YjgF/YER057c/UK114 family
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5135_Mixed,_incl._Carnitine_metabolic_process,_and_YjgF/YER057c/UK114_family


id: CL:515
description: DNA replication, and DNA polymerase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:515_DNA_replication,_and_DNA_polymerase_complex


id: CL:5151
description: Mixed, incl. Inositol monophosphatase-like, and PmbA/TldA metallopeptidase domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5151_Mixed,_incl._Inositol_monophosphatase-like,_and_PmbA/TldA_metallopeptidase_domain_1


id: CL:5153
description: Mixed, incl. Inositol monophosphatase-like, and Peptidase M3A/M3B
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5153_Mixed,_incl._Inositol_monophosphatase-like,_and_Peptidase_M3A/M3B


id: CL:5182
description: Mixed, incl. Cellular iron ion homeostasis, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5182_Mixed,_incl._Cellular_iron_ion_homeostasis,_and_Methyltransferase_domain


id: CL:5202
description: Mixed, incl. Protein lipoylation, and Corrinoid adenosyltransferase PduO/GlcC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5202_Mixed,_incl._Protein_lipoylation,_and_Corrinoid_adenosyltransferase_PduO/GlcC-like


id: CL:5219
description: Mostly uncharacterized, incl. Citrate transporter-like domain, and STAS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5219_Mostly_uncharacterized,_incl._Citrate_transporter-like_domain,_and_STAS_domain


id: CL:5221
description: Citrate transporter-like domain, and Metallo-dependent phosphatase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5221_Citrate_transporter-like_domain,_and_Metallo-dependent_phosphatase-like


id: CL:5237
description: Mixed, incl. NUDIX domain, and HI0933-like insert domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5237_Mixed,_incl._NUDIX_domain,_and_HI0933-like_insert_domain_superfamily


id: CL:5250
description: Mixed, incl. Quorum sensing, and Degradation of aromatic compounds
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5250_Mixed,_incl._Quorum_sensing,_and_Degradation_of_aromatic_compounds


id: CL:5251
description: Mixed, incl. Degradation of aromatic compounds, and Nickel cation binding
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5251_Mixed,_incl._Degradation_of_aromatic_compounds,_and_Nickel_cation_binding


id: CL:5252
description: Mixed, incl. Nickel cation binding, and Degradation of aromatic compounds
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5252_Mixed,_incl._Nickel_cation_binding,_and_Degradation_of_aromatic_compounds


id: CL:5253
description: Mixed, incl. Degradation of aromatic compounds, and Coenzyme A transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5253_Mixed,_incl._Degradation_of_aromatic_compounds,_and_Coenzyme_A_transferase


id: CL:5255
description: Degradation of aromatic compounds, and Coenzyme A transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5255_Degradation_of_aromatic_compounds,_and_Coenzyme_A_transferase


id: CL:5257
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5257_Mixed,_incl._Polycyclic_aromatic_hydrocarbon_degradation,_and_3,4-dihydroxybenzoate_catabolic_process

description:
  Mixed, incl. Polycyclic aromatic hydrocarbon degradation, and 3,4-dihydroxybenzoate catabolic process


id: CL:5281
description: Mixed, incl. Monocarboxylic acid transport, and C4-dicarboxylate anaerobic carrier
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5281_Mixed,_incl._Monocarboxylic_acid_transport,_and_C4-dicarboxylate_anaerobic_carrier


id: CL:5290
description: Mixed, incl. Nickel cation binding, and Tryptophan catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5290_Mixed,_incl._Nickel_cation_binding,_and_Tryptophan_catabolic_process


id: CL:5292
description: Mixed, incl. Nickel cation binding, and Urease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5292_Mixed,_incl._Nickel_cation_binding,_and_Urease_activity


id: CL:5327
description: Mixed, incl. Styrene degradation, and MatE
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5327_Mixed,_incl._Styrene_degradation,_and_MatE


id: CL:5328
description: Mixed, incl. Styrene degradation, and MatE
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5328_Mixed,_incl._Styrene_degradation,_and_MatE


id: CL:5330
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5330_Mixed,_incl._Tyrosine_catabolic_process,_and_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Mixed, incl. Tyrosine catabolic process, and Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen


id: CL:5351
description: Mixed, incl. MnmG, N-terminal domain, and DSBA-like thioredoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5351_Mixed,_incl._MnmG,_N-terminal_domain,_and_DSBA-like_thioredoxin_domain


id: CL:5360
description: Mixed, incl. ABC transporter, permease, and Amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5360_Mixed,_incl._ABC_transporter,_permease,_and_Amino_acid_transport


id: CL:5362
description: Mixed, incl. ABC transporter, permease, and Leucine-binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5362_Mixed,_incl._ABC_transporter,_permease,_and_Leucine-binding_protein_domain


id: CL:5363
description: Mixed, incl. ABC transporter, permease, and Leucine-binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5363_Mixed,_incl._ABC_transporter,_permease,_and_Leucine-binding_protein_domain


id: CL:5364
description: Mixed, incl. ABC transporter, permease, and Leucine-binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5364_Mixed,_incl._ABC_transporter,_permease,_and_Leucine-binding_protein_domain


id: CL:5365
description: Mixed, incl. ABC transporter, permease, and Periplasmic binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5365_Mixed,_incl._ABC_transporter,_permease,_and_Periplasmic_binding_protein_domain


id: CL:5366
description: ABC transporter, permease, and Leucine-binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5366_ABC_transporter,_permease,_and_Leucine-binding_protein_domain


id: CL:5367
description: Mixed, incl. Leucine binding, and Branched-chain amino acid transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5367_Mixed,_incl._Leucine_binding,_and_Branched-chain_amino_acid_transmembrane_transporter_activity


id: CL:5376
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5376_Mixed,_incl._Periplasmic_binding_protein_domain,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter

description:
  Mixed, incl. Periplasmic binding protein domain, and Branched-chain amino acid ATP-binding cassette transporter


id: CL:5385
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5385_Mixed,_incl._Periplasmic_binding_protein_domain,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter

description:
  Mixed, incl. Periplasmic binding protein domain, and Branched-chain amino acid ATP-binding cassette transporter


id: CL:539
description: DNA topoisomerase, type IIA-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:539_DNA_topoisomerase,_type_IIA-like_domain_superfamily


id: CL:5395
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5395_Mixed,_incl._Periplasmic_binding_protein,_and_Branched-chain_amino_acid_transmembrane_transporter_activity

description:
  Mixed, incl. Periplasmic binding protein, and Branched-chain amino acid transmembrane transporter activity


id: CL:5405
description: Mixed, incl. Lipase activity, and CoA-ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5405_Mixed,_incl._Lipase_activity,_and_CoA-ligase_activity


id: CL:5416
description: Mixed, incl. Regulation of signaling, and RimK-like ATP-grasp domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5416_Mixed,_incl._Regulation_of_signaling,_and_RimK-like_ATP-grasp_domain


id: CL:5433
description: Mixed, incl. PUA domain superfamily, and Short-chain fatty acyl coenzyme A regulators, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5433_Mixed,_incl._PUA_domain_superfamily,_and_Short-chain_fatty_acyl_coenzyme_A_regulators,_C-terminal


id: CL:5453
description: Mixed, incl. ABC transporters, and Pentose and glucuronate interconversions
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5453_Mixed,_incl._ABC_transporters,_and_Pentose_and_glucuronate_interconversions


id: CL:5454
description: Mixed, incl. ABC-type transporter activity, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5454_Mixed,_incl._ABC-type_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein


id: CL:5455
description: Mixed, incl. ABC-type transporter activity, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5455_Mixed,_incl._ABC-type_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein


id: CL:5456
description: Mixed, incl. ABC-type transporter activity, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5456_Mixed,_incl._ABC-type_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein


id: CL:5457
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5457_Mixed,_incl._glycerol-3-phosphate_transmembrane_transport,_and_ABC-type_carbohydrate_transporter_activity

description:
  Mixed, incl. glycerol-3-phosphate transmembrane transport, and ABC-type carbohydrate transporter activity


id: CL:5458
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5458_Mixed,_incl._glycerol-3-phosphate_transmembrane_transport,_and_ABC-type_carbohydrate_transporter_activity

description:
  Mixed, incl. glycerol-3-phosphate transmembrane transport, and ABC-type carbohydrate transporter activity


id: CL:5459
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5459_Mixed,_incl._glycerol-3-phosphate_transmembrane_transport,_and_ABC-type_carbohydrate_transporter_activity

description:
  Mixed, incl. glycerol-3-phosphate transmembrane transport, and ABC-type carbohydrate transporter activity


id: CL:5460
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5460_Mixed,_incl._ABC-type_carbohydrate_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein

description:
  Mixed, incl. ABC-type carbohydrate transporter activity, and Bacterial extracellular solute-binding protein


id: CL:5461
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5461_Mixed,_incl._ABC-type_carbohydrate_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein

description:
  Mixed, incl. ABC-type carbohydrate transporter activity, and Bacterial extracellular solute-binding protein


id: CL:5463
description: Mixed, incl. MalK, OB fold domain, and ABC-type carbohydrate transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5463_Mixed,_incl._MalK,_OB_fold_domain,_and_ABC-type_carbohydrate_transporter_activity


id: CL:5477
description: Mixed, incl. Bacterial transcriptional regulator, and MalK, OB fold domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5477_Mixed,_incl._Bacterial_transcriptional_regulator,_and_MalK,_OB_fold_domain


id: CL:5487
description: Mixed, incl. Transport-associated OB, type 2, and ABC-type carbohydrate transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5487_Mixed,_incl._Transport-associated_OB,_type_2,_and_ABC-type_carbohydrate_transporter_activity


id: CL:5498
description: Mixed, incl. Sugar transport, and Sulfatase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5498_Mixed,_incl._Sugar_transport,_and_Sulfatase,_N-terminal


id: CL:5514
description: Mixed, incl. Glycoside hydrolase superfamily, and Hexokinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5514_Mixed,_incl._Glycoside_hydrolase_superfamily,_and_Hexokinase_activity


id: CL:5517
description: Alpha-glucan metabolic process, and glycerol-3-phosphate transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5517_Alpha-glucan_metabolic_process,_and_glycerol-3-phosphate_transmembrane_transport


id: CL:5533
description: Mixed, incl. Ether lipid metabolism, and Response to antibiotic
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5533_Mixed,_incl._Ether_lipid_metabolism,_and_Response_to_antibiotic


id: CL:5546
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5546_Mixed,_incl._SnoaL-like_polyketide_cyclase,_and_ABC_transporter,_maltose/maltodextrin_import,_MalK-like

description:
  Mixed, incl. SnoaL-like polyketide cyclase, and ABC transporter, maltose/maltodextrin import, MalK-like


id: CL:5547
description: Mixed, incl. SnoaL-like polyketide cyclase, and Activator of Hsp90 ATPase homolog 1-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5547_Mixed,_incl._SnoaL-like_polyketide_cyclase,_and_Activator_of_Hsp90_ATPase_homolog_1-like_protein


id: CL:5549
description: Mixed, incl. SnoaL-like polyketide cyclase, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5549_Mixed,_incl._SnoaL-like_polyketide_cyclase,_and_Bacterial_extracellular_solute-binding_protein


id: CL:5560
description: Mixed, incl. Activator of Hsp90 ATPase homolog 1-like protein, and SnoaL-like polyketide cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5560_Mixed,_incl._Activator_of_Hsp90_ATPase_homolog_1-like_protein,_and_SnoaL-like_polyketide_cyclase


id: CL:5570
description: Mixed, incl. Enzyme inhibitor activity, and Phenylacetate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5570_Mixed,_incl._Enzyme_inhibitor_activity,_and_Phenylacetate_catabolic_process


id: CL:5585
description: Mixed, incl. ABC transporter, ferric cation import, FbpC, and DeoR C-terminal sensor domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5585_Mixed,_incl._ABC_transporter,_ferric_cation_import,_FbpC,_and_DeoR_C-terminal_sensor_domain


id: CL:5589
description: ABC transporter, ferric cation import, FbpC, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5589_ABC_transporter,_ferric_cation_import,_FbpC,_and_Bacterial_extracellular_solute-binding_protein


id: CL:5601
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5601_Mixed,_incl._Racemase_activity,_acting_on_amino_acids_and_derivatives,_and_FAD_dependent_oxidoreductase

description:
  Mixed, incl. Racemase activity, acting on amino acids and derivatives, and FAD dependent oxidoreductase


id: CL:561
description: Mixed, incl. Maturation of SSU-rRNA, and Epoxide hydrolase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:561_Mixed,_incl._Maturation_of_SSU-rRNA,_and_Epoxide_hydrolase-like


id: CL:5610
description: Mixed, incl. Pentose and glucuronate interconversions, and Sugar transport
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5610_Mixed,_incl._Pentose_and_glucuronate_interconversions,_and_Sugar_transport


id: CL:5614
description: Mixed, incl. Sugar transport, and Heparinase II/III-like
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5614_Mixed,_incl._Sugar_transport,_and_Heparinase_II/III-like


id: CL:5628
description: Mixed, incl. Uronic acid metabolic process, and Mannitol dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5628_Mixed,_incl._Uronic_acid_metabolic_process,_and_Mannitol_dehydrogenase


id: CL:5642
description: Mixed, incl. Polyamine transport, and Thiamine transport
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5642_Mixed,_incl._Polyamine_transport,_and_Thiamine_transport


id: CL:5643
description: Mixed, incl. Polyamine transport, and ABC-type polyamine transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5643_Mixed,_incl._Polyamine_transport,_and_ABC-type_polyamine_transporter_activity


id: CL:5645
description: Polyamine transport, and Asp/Glu/hydantoin racemase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5645_Polyamine_transport,_and_Asp/Glu/hydantoin_racemase


id: CL:5657
description: Mixed, incl. Polyamine transport, and Iron ion homeostasis
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5657_Mixed,_incl._Polyamine_transport,_and_Iron_ion_homeostasis


id: CL:5670
description: Thiamine transport, and Homocysteine-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5670_Thiamine_transport,_and_Homocysteine-binding_domain


id: CL:5687
description: Mixed, incl. Two-component system, and GntR, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5687_Mixed,_incl._Two-component_system,_and_GntR,_C-terminal


id: CL:5688
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5688_Mixed,_incl._Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor,_and_Receptor

description:
  Mixed, incl. Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, and Receptor


id: CL:5689
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5689_Mixed,_incl._Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor,_and_Tripartite_ATP-independent_periplasmic_transporter_complex

description:
  Mixed, incl. Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, and Tripartite ATP-independent periplasmic transporter complex


id: CL:5691
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5691_Mostly_uncharacterized,_incl._3-hydroxyisobutyrate_dehydrogenase-related,_and_Threonine_catabolic_process

description:
  Mostly uncharacterized, incl. 3-hydroxyisobutyrate dehydrogenase-related, and Threonine catabolic process


id: CL:5692
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5692_Mixed,_incl._Shikimate_metabolic_process,_and_3-hydroxyisobutyrate_dehydrogenase-related,_conserved_site

description:
  Mixed, incl. Shikimate metabolic process, and 3-hydroxyisobutyrate dehydrogenase-related, conserved site


id: CL:5695
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5695_Mixed,_incl._Shikimate_metabolic_process,_and_3-hydroxyisobutyrate_dehydrogenase-related,_conserved_site

description:
  Mixed, incl. Shikimate metabolic process, and 3-hydroxyisobutyrate dehydrogenase-related, conserved site


id: CL:5711
description: Mixed, incl. Threonine catabolic process, and Xylose isomerase-like TIM barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5711_Mixed,_incl._Threonine_catabolic_process,_and_Xylose_isomerase-like_TIM_barrel


id: CL:572
description: Mixed, incl. glycyl-tRNA aminoacylation, and Trypsin-like peptidase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:572_Mixed,_incl._glycyl-tRNA_aminoacylation,_and_Trypsin-like_peptidase_domain


id: CL:5729
description: Mixed, incl. Solute binding protein, TakP-like, and C4-dicarboxylate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5729_Mixed,_incl._Solute_binding_protein,_TakP-like,_and_C4-dicarboxylate_transport


id: CL:573
description: Mixed, incl. Calcium ion binding, and DHHA1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:573_Mixed,_incl._Calcium_ion_binding,_and_DHHA1_domain


id: CL:5731
description: Mixed, incl. Lactonohydrolase activity, and 3-isopropylmalate dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5731_Mixed,_incl._Lactonohydrolase_activity,_and_3-isopropylmalate_dehydrogenase_activity


id: CL:5745
description: Mixed, incl. Solute binding protein, TakP-like, and Response to antibiotic
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5745_Mixed,_incl._Solute_binding_protein,_TakP-like,_and_Response_to_antibiotic


id: CL:5756
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5756_Mixed,_incl._Bordetella_uptake_gene,_domain_1,_and_Tripartite_tricarboxylate_transporter_TctA_family

description:
  Mixed, incl. Bordetella uptake gene, domain 1, and Tripartite tricarboxylate transporter TctA family


id: CL:5757
description: Mixed, incl. Bordetella uptake gene, and Protein of unknown function DUF1468
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5757_Mixed,_incl._Bordetella_uptake_gene,_and_Protein_of_unknown_function_DUF1468


id: CL:5759
description: Mixed, incl. HIT-like superfamily, and Bordetella uptake gene
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5759_Mixed,_incl._HIT-like_superfamily,_and_Bordetella_uptake_gene


id: CL:5771
description: Mixed, incl. Bordetella uptake gene, and Protein of unknown function DUF1468
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5771_Mixed,_incl._Bordetella_uptake_gene,_and_Protein_of_unknown_function_DUF1468


id: CL:5784
description: Mixed, incl. Propionate metabolic process, and Bordetella uptake gene, domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5784_Mixed,_incl._Propionate_metabolic_process,_and_Bordetella_uptake_gene,_domain_1


id: CL:5799
description: Mixed, incl. Carbohydrate binding, and TRAP C4-dicarboxylate transport system permease DctM subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5799_Mixed,_incl._Carbohydrate_binding,_and_TRAP_C4-dicarboxylate_transport_system_permease_DctM_subunit


id: CL:5800
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5800_Mixed,_incl._TRAP_C4-dicarboxylate_transport_system_permease_DctM_subunit,_and_TRAP_transporter_solute_receptor_DctP

description:
  Mixed, incl. TRAP C4-dicarboxylate transport system permease DctM subunit, and TRAP transporter solute receptor DctP


id: CL:5801
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5801_Mixed,_incl._TRAP_C4-dicarboxylate_transport_system_permease_DctM_subunit,_and_TRAP_transporter_solute_receptor_DctP

description:
  Mixed, incl. TRAP C4-dicarboxylate transport system permease DctM subunit, and TRAP transporter solute receptor DctP


id: CL:5802
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5802_Mixed,_incl._TRAP_transporter_solute_receptor,_DctP_family,_and_TRAP_C4-dicarboxylate_transport_system_permease_DctM_subunit

description:
  Mixed, incl. TRAP transporter solute receptor, DctP family, and TRAP C4-dicarboxylate transport system permease DctM subunit


id: CL:5803
description: Mixed, incl. TRAP transporter solute receptor, DctP family, and Enolase C-terminal domain-like
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5803_Mixed,_incl._TRAP_transporter_solute_receptor,_DctP_family,_and_Enolase_C-terminal_domain-like


id: CL:5816
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5816_Mixed,_incl._Periplasmic_sensor-like_domain_superfamily,_and_TRAP_transporter_solute_receptor,_DctP_family

description:
  Mixed, incl. Periplasmic sensor-like domain superfamily, and TRAP transporter solute receptor, DctP family


id: CL:5826
description: Mixed, incl. GntR, C-terminal, and beta-Alanine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5826_Mixed,_incl._GntR,_C-terminal,_and_beta-Alanine_metabolism


id: CL:5844
description: Mixed, incl. Glycoside hydrolase-type carbohydrate-binding, and Phenylacetate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5844_Mixed,_incl._Glycoside_hydrolase-type_carbohydrate-binding,_and_Phenylacetate_catabolic_process


id: CL:5855
description: Mixed, incl. Oxoprolinase family, and tRNA 3-trailer cleavage
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5855_Mixed,_incl._Oxoprolinase_family,_and_tRNA_3-trailer_cleavage


id: CL:5856
description: Mixed, incl. tRNA 3-trailer cleavage, and Phenol-containing compound metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5856_Mixed,_incl._tRNA_3-trailer_cleavage,_and_Phenol-containing_compound_metabolic_process


id: CL:5859
description: Mixed, incl. Phenol-containing compound metabolic process, and Nitroreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5859_Mixed,_incl._Phenol-containing_compound_metabolic_process,_and_Nitroreductase


id: CL:586
description: glycyl-tRNA aminoacylation, and Trypsin-like peptidase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:586_glycyl-tRNA_aminoacylation,_and_Trypsin-like_peptidase_domain


id: CL:5882
description: Oxoprolinase family, and Cyclophilin-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5882_Oxoprolinase_family,_and_Cyclophilin-like_domain_superfamily


id: CL:5894
description: Mixed, incl. Latent infection - Other responses of Mtb to phagocytosis, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5894_Mixed,_incl._Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis,_and_Peptide_transport


id: CL:5895
description: Mixed, incl. Latent infection - Other responses of Mtb to phagocytosis, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5895_Mixed,_incl._Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis,_and_Peptide_transport


id: CL:5896
description: Mixed, incl. Peptide transport, and Nickel cation transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5896_Mixed,_incl._Peptide_transport,_and_Nickel_cation_transmembrane_transporter_activity


id: CL:5897
description: Mixed, incl. Peptide transport, and Nickel cation transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5897_Mixed,_incl._Peptide_transport,_and_Nickel_cation_transmembrane_transporter_activity


id: CL:5898
description: Nickel cation transmembrane transporter activity, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5898_Nickel_cation_transmembrane_transporter_activity,_and_Peptide_transport


id: CL:5899
description: Nickel cation transmembrane transporter activity, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5899_Nickel_cation_transmembrane_transporter_activity,_and_Peptide_transport


id: CL:5901
description: Peptide transport, and Nickel cation transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5901_Peptide_transport,_and_Nickel_cation_transmembrane_transporter_activity


id: CL:5919
description: Peptide transport, and Nickel cation transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5919_Peptide_transport,_and_Nickel_cation_transmembrane_transporter_activity


id: CL:5933
description: Peptide transport, and Nickel cation transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5933_Peptide_transport,_and_Nickel_cation_transmembrane_transporter_activity


id: CL:5946
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5946_Mixed,_incl._Peptide_transmembrane_transporter_activity,_and_Oligopeptide_transport_permease_C-like,_N-terminal_domain

description:
  Mixed, incl. Peptide transmembrane transporter activity, and Oligopeptide transport permease C-like, N-terminal domain


id: CL:595
description: Mixed, incl. Nucleobase-containing compound kinase activity, and Cobalamin
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:595_Mixed,_incl._Nucleobase-containing_compound_kinase_activity,_and_Cobalamin


id: CL:5956
description: Mixed, incl. Cyanoamino acid metabolism, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5956_Mixed,_incl._Cyanoamino_acid_metabolism,_and_Peptide_transport


id: CL:5958
description: Cyanoamino acid metabolism, and Auxin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5958_Cyanoamino_acid_metabolism,_and_Auxin_metabolic_process


id: CL:596
description: Mixed, incl. Nucleobase-containing compound kinase activity, and Cobalamin
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:596_Mixed,_incl._Nucleobase-containing_compound_kinase_activity,_and_Cobalamin


id: CL:5968
description: Peptide transport, and Nickel cation transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5968_Peptide_transport,_and_Nickel_cation_transmembrane_transporter_activity


id: CL:5977
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5977_Mixed,_incl._Glycine_betaine_transport,_and_ABC-type_glycine_betaine_transport_system,_substrate-binding_domain

description:
  Mixed, incl. Glycine betaine transport, and ABC-type glycine betaine transport system, substrate-binding domain


id: CL:5979
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5979_ABC-type_glycine_betaine_transport_system,_substrate-binding_domain,_and_Amine_transmembrane_transporter_activity

description:
  ABC-type glycine betaine transport system, substrate-binding domain, and Amine transmembrane transporter activity


id: CL:598
description: Cobalamin, and Nucleobase-containing compound kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:598_Cobalamin,_and_Nucleobase-containing_compound_kinase_activity


id: CL:5999
description: Mixed, incl. Conserved hypothetical protein CHP02058, and Choline metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:5999_Mixed,_incl._Conserved_hypothetical_protein_CHP02058,_and_Choline_metabolic_process


id: CL:6001
description: Mixed, incl. GMC oxidoreductase, and Sulfatase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6001_Mixed,_incl._GMC_oxidoreductase,_and_Sulfatase,_N-terminal


id: CL:6019
description: Mixed, incl. Pseudouridine synthase, RsuA/RluB/E/F, and Cytolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6019_Mixed,_incl._Pseudouridine_synthase,_RsuA/RluB/E/F,_and_Cytolysis


id: CL:6035
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6035_Mostly_uncharacterized,_incl._Glutathione_S-transferase,_C-terminal_domain,_and_SNARE_associated_Golgi_protein

description:
  Mostly uncharacterized, incl. Glutathione S-transferase, C-terminal domain, and SNARE associated Golgi protein


id: CL:6037
description: Mixed, incl. SNARE associated Golgi protein, and Phosphonate and phosphinate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6037_Mixed,_incl._SNARE_associated_Golgi_protein,_and_Phosphonate_and_phosphinate_metabolism


id: CL:6056
description: Mixed, incl. Nitrogen metabolism, and Alkanesulfonate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6056_Mixed,_incl._Nitrogen_metabolism,_and_Alkanesulfonate_transport


id: CL:6057
description: Mixed, incl. Nitrogen metabolism, and Alkanesulfonate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6057_Mixed,_incl._Nitrogen_metabolism,_and_Alkanesulfonate_transport


id: CL:6059
description: Mixed, incl. Nitrogen metabolism, and Alkanesulfonate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6059_Mixed,_incl._Nitrogen_metabolism,_and_Alkanesulfonate_transport


id: CL:6060
description: Mixed, incl. Nitrogen metabolism, and Alkanesulfonate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6060_Mixed,_incl._Nitrogen_metabolism,_and_Alkanesulfonate_transport


id: CL:6061
description: Nitrogen metabolism, and Alkanesulfonate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6061_Nitrogen_metabolism,_and_Alkanesulfonate_transport


id: CL:6062
description: Mixed, incl. Nitrogen metabolism, and SsuA/THI5-like
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6062_Mixed,_incl._Nitrogen_metabolism,_and_SsuA/THI5-like


id: CL:6064
description: Mixed, incl. NMT1/THI5 family, and Alkanesulfonate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6064_Mixed,_incl._NMT1/THI5_family,_and_Alkanesulfonate_transport


id: CL:6083
description: Mixed, incl. BFD-like [2Fe-2S] binding domain, and Nitrate transport ATP-binding subunit C/D
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6083_Mixed,_incl._BFD-like_[2Fe-2S]_binding_domain,_and_Nitrate_transport_ATP-binding_subunit_C/D


id: CL:6099
description: Mixed, incl. Nitrate transport ATP-binding subunit C/D, and NMT1-like family
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6099_Mixed,_incl._Nitrate_transport_ATP-binding_subunit_C/D,_and_NMT1-like_family


id: CL:6110
description: Mixed, incl. Agmatinase activity, and NMT1/THI5 like
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6110_Mixed,_incl._Agmatinase_activity,_and_NMT1/THI5_like


id: CL:612
description: Mixed, incl. Aerobic electron transport chain, and dUTPase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:612_Mixed,_incl._Aerobic_electron_transport_chain,_and_dUTPase


id: CL:6122
description: Mixed, incl. NMT1/THI5 family, and Amidohydrolase family
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6122_Mixed,_incl._NMT1/THI5_family,_and_Amidohydrolase_family


id: CL:6146
description: Mixed, incl. Vicinal oxygen chelate (VOC) domain, and MerR transcriptional regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6146_Mixed,_incl._Vicinal_oxygen_chelate_(VOC)_domain,_and_MerR_transcriptional_regulator


id: CL:6148
description: Mixed, incl. Primosome complex, and Response to heat
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6148_Mixed,_incl._Primosome_complex,_and_Response_to_heat


id: CL:6162
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6162_Mixed,_incl._Exodeoxyribonuclease_III_activity,_and_Glyoxalase/Bleomycin_resistance_protein/Dioxygenase_superfamily

description:
  Mixed, incl. Exodeoxyribonuclease III activity, and Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily


id: CL:6174
description: Mostly uncharacterized, incl. Protease binding, and Cell wall
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6174_Mostly_uncharacterized,_incl._Protease_binding,_and_Cell_wall


id: CL:6175
description: Mostly uncharacterized, incl. Domain of unknown function DUF4178, and Protease binding
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6175_Mostly_uncharacterized,_incl._Domain_of_unknown_function_DUF4178,_and_Protease_binding


id: CL:6176
description: Mostly uncharacterized, incl. Domain of unknown function DUF4178, and Protease binding
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6176_Mostly_uncharacterized,_incl._Domain_of_unknown_function_DUF4178,_and_Protease_binding


id: CL:6178
description: Mixed, incl. Domain of unknown function DUF4178, and Protease binding
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6178_Mixed,_incl._Domain_of_unknown_function_DUF4178,_and_Protease_binding


id: CL:6180
description: Mixed, incl. Protease binding, and Tetracyclin repressor-like, C-terminal domain (WHG)
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6180_Mixed,_incl._Protease_binding,_and_Tetracyclin_repressor-like,_C-terminal_domain_(WHG)


id: CL:6196
description: Domain of unknown function DUF4178, and Spermidine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6196_Domain_of_unknown_function_DUF4178,_and_Spermidine_biosynthesis


id: CL:6208
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6208_Mostly_uncharacterized,_incl._Polysaccharide_transmembrane_transporter_activity,_and_Carbon-oxygen_lyase_activity,_acting_on_phosphates

description:
  Mostly uncharacterized, incl. Polysaccharide transmembrane transporter activity, and Carbon-oxygen lyase activity, acting on phosphates


id: CL:6209
description: Mixed, incl. Polysaccharide transmembrane transporter activity, and Lipid binding
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6209_Mixed,_incl._Polysaccharide_transmembrane_transporter_activity,_and_Lipid_binding


id: CL:6220
description: Mixed, incl. Carbon-oxygen lyase activity, acting on phosphates, and Repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6220_Mixed,_incl._Carbon-oxygen_lyase_activity,_acting_on_phosphates,_and_Repressor


id: CL:623
description: Mixed, incl. Nucleoside monophosphate kinase activity, and Toluene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:623_Mixed,_incl._Nucleoside_monophosphate_kinase_activity,_and_Toluene_degradation


id: CL:6230
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6230_Mixed,_incl._Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_one_atom_of_oxygen,_and_NAD(P)-binding_domain

description:
  Mixed, incl. Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen, and NAD(P)-binding domain


id: CL:6251
description: Mixed, incl. Protein localization to cell periphery, and Peptidase M41-like
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6251_Mixed,_incl._Protein_localization_to_cell_periphery,_and_Peptidase_M41-like


id: CL:6268
description: Mixed, incl. EamA domain, and Amino sugar metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6268_Mixed,_incl._EamA_domain,_and_Amino_sugar_metabolic_process


id: CL:6270
description: Mixed, incl. EamA domain, and UDP-N-acetylglucosamine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6270_Mixed,_incl._EamA_domain,_and_UDP-N-acetylglucosamine_metabolic_process


id: CL:6272
description: Mixed, incl. EamA domain, and Ferric-uptake regulator, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6272_Mixed,_incl._EamA_domain,_and_Ferric-uptake_regulator,_C-terminal_domain


id: CL:6274
description: Mixed, incl. Ferric-uptake regulator, C-terminal domain, and Lipoic acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6274_Mixed,_incl._Ferric-uptake_regulator,_C-terminal_domain,_and_Lipoic_acid_metabolism


id: CL:6308
description: Mixed, incl. LysE type translocator, and Cupin
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6308_Mixed,_incl._LysE_type_translocator,_and_Cupin


id: CL:6310
description: Mixed, incl. YebC-like, and L-amino acid transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6310_Mixed,_incl._YebC-like,_and_L-amino_acid_transmembrane_transporter_activity


id: CL:6330
description: Mixed, incl. Purine nucleobase metabolic process, and [2Fe-2S]-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6330_Mixed,_incl._Purine_nucleobase_metabolic_process,_and_[2Fe-2S]-binding


id: CL:6331
description: Mixed, incl. Purine nucleobase metabolic process, and [2Fe-2S]-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6331_Mixed,_incl._Purine_nucleobase_metabolic_process,_and_[2Fe-2S]-binding


id: CL:6332
description: Mixed, incl. Purine nucleobase metabolic process, and [2Fe-2S]-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6332_Mixed,_incl._Purine_nucleobase_metabolic_process,_and_[2Fe-2S]-binding


id: CL:6333
description: Mixed, incl. Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead, and [2Fe-2S]-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6333_Mixed,_incl._Aldehyde_oxidase/xanthine_dehydrogenase,_a/b_hammerhead,_and_[2Fe-2S]-binding


id: CL:6335
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6335_Mixed,_incl._Aldehyde_oxidase/xanthine_dehydrogenase,_a/b_hammerhead_superfamily,_and_Furfural_degradation

description:
  Mixed, incl. Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily, and Furfural degradation


id: CL:6337
description: Mixed, incl. XdhC- CoxI, and Molybdopterin dehydrogenase, FAD-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6337_Mixed,_incl._XdhC-_CoxI,_and_Molybdopterin_dehydrogenase,_FAD-binding


id: CL:634
description: Structural constituent of chromatin, and Cold shock, CspA
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:634_Structural_constituent_of_chromatin,_and_Cold_shock,_CspA


id: CL:6363
description: Mixed, incl. Phytanoyl-CoA dioxygenase-like, and Multiheme cytochrome superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6363_Mixed,_incl._Phytanoyl-CoA_dioxygenase-like,_and_Multiheme_cytochrome_superfamily


id: CL:6372
description: Purine nucleobase metabolic process, and Aldehyde oxidase/xanthine dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6372_Purine_nucleobase_metabolic_process,_and_Aldehyde_oxidase/xanthine_dehydrogenase


id: CL:6374
description: Purine nucleobase metabolic process, and Aldehyde oxidase/xanthine dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6374_Purine_nucleobase_metabolic_process,_and_Aldehyde_oxidase/xanthine_dehydrogenase


id: CL:6397
description: Mixed, incl. ATPase, dynein-related, AAA domain, and Von Willebrand factor, type A
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6397_Mixed,_incl._ATPase,_dynein-related,_AAA_domain,_and_Von_Willebrand_factor,_type_A


id: CL:6412
description: Mixed, incl. ABC transporter, permease, and ABC transporter substrate-binding protein PnrA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6412_Mixed,_incl._ABC_transporter,_permease,_and_ABC_transporter_substrate-binding_protein_PnrA-like


id: CL:6414
description: ABC transporter substrate-binding protein PnrA-like, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6414_ABC_transporter_substrate-binding_protein_PnrA-like,_and_ABC_transporter,_permease


id: CL:6434
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6434_Mixed,_incl._Fe-S_cluster_assembly_domain_superfamily,_and_N-terminal_protein_amino_acid_acetylation

description:
  Mixed, incl. Fe-S cluster assembly domain superfamily, and N-terminal protein amino acid acetylation


id: CL:6454
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6454_Mixed,_incl._DNA-binding_transcription_factor_activity,_and_DNA_breaking-rejoining_enzyme,_catalytic_core

description:
  Mixed, incl. DNA-binding transcription factor activity, and DNA breaking-rejoining enzyme, catalytic core


id: CL:6455
description: Mixed, incl. LysR, substrate-binding, and Homeobox-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6455_Mixed,_incl._LysR,_substrate-binding,_and_Homeobox-like_domain_superfamily


id: CL:6456
description: Mixed, incl. LysR, substrate-binding, and DNA binding HTH domain, AraC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6456_Mixed,_incl._LysR,_substrate-binding,_and_DNA_binding_HTH_domain,_AraC-type


id: CL:6457
description: Mixed, incl. LysR, substrate-binding, and DNA binding HTH domain, AraC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6457_Mixed,_incl._LysR,_substrate-binding,_and_DNA_binding_HTH_domain,_AraC-type


id: CL:6458
description: LysR, substrate-binding, and aspartate-tRNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6458_LysR,_substrate-binding,_and_aspartate-tRNA_ligase_activity


id: CL:6493
description: Mixed, incl. DNA binding HTH domain, AraC-type, and DNA-binding HTH domain, TetR-type
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6493_Mixed,_incl._DNA_binding_HTH_domain,_AraC-type,_and_DNA-binding_HTH_domain,_TetR-type


id: CL:6496
description: DNA binding HTH domain, AraC-type, and Sphingolipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6496_DNA_binding_HTH_domain,_AraC-type,_and_Sphingolipid_metabolism


id: CL:650
description: Mixed, incl. Regulation of cell shape, and Penicillin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:650_Mixed,_incl._Regulation_of_cell_shape,_and_Penicillin_binding


id: CL:651
description: Mixed, incl. Regulation of cell shape, and Penicillin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:651_Mixed,_incl._Regulation_of_cell_shape,_and_Penicillin_binding


id: CL:6516
description: Mixed, incl. HTH ArsR-type DNA-binding domain, and FAS1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6516_Mixed,_incl._HTH_ArsR-type_DNA-binding_domain,_and_FAS1_domain


id: CL:6518
description: HTH ArsR-type DNA-binding domain, and L,D-transpeptidase catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6518_HTH_ArsR-type_DNA-binding_domain,_and_L,D-transpeptidase_catalytic_domain


id: CL:652
description: Mixed, incl. Regulation of cell shape, and Penicillin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:652_Mixed,_incl._Regulation_of_cell_shape,_and_Penicillin_binding


id: CL:654
description: Regulation of cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:654_Regulation_of_cell_shape,_and_Cell_division_site


id: CL:6540
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6540_Mixed,_incl._Acetyltransferase_(GNAT)_domain,_and_Oxidoreductase_activity,_acting_on_NAD(P)H,_NAD(P)_as_acceptor

description:
  Mixed, incl. Acetyltransferase (GNAT) domain, and Oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor


id: CL:655
description: Cell cycle, and D-alanine-D-alanine ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:655_Cell_cycle,_and_D-alanine-D-alanine_ligase_activity


id: CL:6562
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6562_Mostly_uncharacterized,_incl._DNA_breaking-rejoining_enzyme,_catalytic_core,_and_RmlC-like_cupin_domain_superfamily

description:
  Mostly uncharacterized, incl. DNA breaking-rejoining enzyme, catalytic core, and RmlC-like cupin domain superfamily


id: CL:6563
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6563_Mostly_uncharacterized,_incl._RmlC-like_cupin_domain_superfamily,_and_Universal_stress_protein_A_family

description:
  Mostly uncharacterized, incl. RmlC-like cupin domain superfamily, and Universal stress protein A family


id: CL:6564
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6564_Mostly_uncharacterized,_incl._Universal_stress_protein_A_family,_and_Dimethylpropiothetin_dethiomethylase_activity

description:
  Mostly uncharacterized, incl. Universal stress protein A family, and Dimethylpropiothetin dethiomethylase activity


id: CL:6566
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6566_Mixed,_incl._Dimethylpropiothetin_dethiomethylase_activity,_and_Ferric_reductase_like_transmembrane_component

description:
  Mixed, incl. Dimethylpropiothetin dethiomethylase activity, and Ferric reductase like transmembrane component


id: CL:6578
description: Mixed, incl. Universal stress protein A family, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6578_Mixed,_incl._Universal_stress_protein_A_family,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:658
description: Cell shape, and Cell cycle protein
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:658_Cell_shape,_and_Cell_cycle_protein


id: CL:6587
description: Mixed, incl. DJ-1/PfpI, and AsnC-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6587_Mixed,_incl._DJ-1/PfpI,_and_AsnC-type_HTH_domain


id: CL:659
description: Cell shape, and Cell cycle protein
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:659_Cell_shape,_and_Cell_cycle_protein


id: CL:6600
description: Mixed, incl. DNA breaking-rejoining enzyme, catalytic core, and Vacuole
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6600_Mixed,_incl._DNA_breaking-rejoining_enzyme,_catalytic_core,_and_Vacuole


id: CL:6601
description: Mixed, incl. DNA breaking-rejoining enzyme, catalytic core, and Vacuole
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6601_Mixed,_incl._DNA_breaking-rejoining_enzyme,_catalytic_core,_and_Vacuole


id: CL:6614
description: Mixed, incl. PIN domain, and YefM-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6614_Mixed,_incl._PIN_domain,_and_YefM-like_superfamily


id: CL:6627
description: Mixed, incl. DNA alkylation, and GIY-YIG endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6627_Mixed,_incl._DNA_alkylation,_and_GIY-YIG_endonuclease


id: CL:6629
description: Mixed, incl. Purine nucleosidase activity, and Quorum sensing
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6629_Mixed,_incl._Purine_nucleosidase_activity,_and_Quorum_sensing


id: CL:6645
description: Mixed, incl. DNA methylation on adenine, and Calcineurin-like phosphoesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6645_Mixed,_incl._DNA_methylation_on_adenine,_and_Calcineurin-like_phosphoesterase


id: CL:6657
description: Mostly uncharacterized, incl. Asp/Glu racemase, and HIT-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6657_Mostly_uncharacterized,_incl._Asp/Glu_racemase,_and_HIT-like_superfamily


id: CL:6660
description: Mixed, incl. MAPEG family, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6660_Mixed,_incl._MAPEG_family,_and_Signal


id: CL:6693
description: Mostly uncharacterized, incl. DNA recombination, and Secretion by the type IV secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6693_Mostly_uncharacterized,_incl._DNA_recombination,_and_Secretion_by_the_type_IV_secretion_system


id: CL:6694
description: Mixed, incl. Transposase activity, and DNA modification
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6694_Mixed,_incl._Transposase_activity,_and_DNA_modification


id: CL:6695
description: Mixed, incl. Transposase activity, and Toxin-antitoxin complex
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6695_Mixed,_incl._Transposase_activity,_and_Toxin-antitoxin_complex


id: CL:6696
description: Mixed, incl. Transposase activity, and Toxin-antitoxin complex
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6696_Mixed,_incl._Transposase_activity,_and_Toxin-antitoxin_complex


id: CL:6698
description: Transposase activity, and HupE / UreJ protein
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6698_Transposase_activity,_and_HupE_/_UreJ_protein


id: CL:6699
description: Mixed, incl. HupE / UreJ protein
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6699_Mixed,_incl._HupE_/_UreJ_protein


id: CL:670
description: Mur ligase, central, and Penicillin-binding Protein dimerisation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:670_Mur_ligase,_central,_and_Penicillin-binding_Protein_dimerisation_domain


id: CL:6719
description: Toxin-antitoxin complex, and Toxin sequestering activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6719_Toxin-antitoxin_complex,_and_Toxin_sequestering_activity


id: CL:6733
description: Mixed, incl. Transposase activity, and Pfam phage integrase family
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6733_Mixed,_incl._Transposase_activity,_and_Pfam_phage_integrase_family


id: CL:6746
description: Mixed, incl. DNA modification, and Helicase/UvrB, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6746_Mixed,_incl._DNA_modification,_and_Helicase/UvrB,_N-terminal


id: CL:6747
description: Mixed, incl. DNA modification, and Helicase/UvrB, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6747_Mixed,_incl._DNA_modification,_and_Helicase/UvrB,_N-terminal


id: CL:6750
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6750_Mixed,_incl._N4/N6-methyltransferase,_Type_III_restriction-modification_enzyme_EcoPI_Mod_subunit-like,_and_Helicase/UvrB,_N-terminal

description:
  Mixed, incl. N4/N6-methyltransferase, Type III restriction-modification enzyme EcoPI Mod subunit-like, and Helicase/UvrB, N-terminal


id: CL:6775
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6775_Mixed,_incl._Sequence-specific_double-stranded_DNA_binding,_and_tRNA_endonuclease-like_domain_superfamily

description:
  Mixed, incl. Sequence-specific double-stranded DNA binding, and tRNA endonuclease-like domain superfamily


id: CL:6786
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6786_Mostly_uncharacterized,_incl._Secretion_by_the_type_IV_secretion_system,_and_Domain_of_unknown_function_DUF2285

description:
  Mostly uncharacterized, incl. Secretion by the type IV secretion system, and Domain of unknown function DUF2285


id: CL:6787
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6787_Mostly_uncharacterized,_incl._Secretion_by_the_type_IV_secretion_system,_and_Domain_of_unknown_function_DUF2285

description:
  Mostly uncharacterized, incl. Secretion by the type IV secretion system, and Domain of unknown function DUF2285


id: CL:6790
description: Mixed, incl. Secretion by the type IV secretion system, and Domain of unknown function DUF2285
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6790_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_Domain_of_unknown_function_DUF2285


id: CL:6791
description: Mixed, incl. Secretion by the type IV secretion system, and Domain of unknown function DUF2285
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6791_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_Domain_of_unknown_function_DUF2285


id: CL:6793
description: Mixed, incl. Secretion by the type IV secretion system, and Side of membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6793_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_Side_of_membrane


id: CL:6796
description: Mixed, incl. Protein secretion by the type IV secretion system, and Defense response
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6796_Mixed,_incl._Protein_secretion_by_the_type_IV_secretion_system,_and_Defense_response


id: CL:6818
description: Mixed, incl. Domain of unknown function DUF2285, and Peptidase S26
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6818_Mixed,_incl._Domain_of_unknown_function_DUF2285,_and_Peptidase_S26


id: CL:6830
description: Mixed, incl. ParB-like nuclease domain, and TOPRIM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6830_Mixed,_incl._ParB-like_nuclease_domain,_and_TOPRIM_domain


id: CL:6850
description: Mixed, incl. Arm DNA-binding domain, and DUS-like, FMN-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:6850_Mixed,_incl._Arm_DNA-binding_domain,_and_DUS-like,_FMN-binding_domain


id: CL:691
description: Mixed, incl. MreB/Mbl protein, and Cell cycle protein
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:691_Mixed,_incl._MreB/Mbl_protein,_and_Cell_cycle_protein


id: CL:70
description: Translation, and RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:70_Translation,_and_RNA_metabolic_process


id: CL:71
description: Translation, and RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:71_Translation,_and_RNA_metabolic_process


id: CL:715
description: Mixed, incl. 4Fe-4S dicluster domain, and Transglycosylase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:715_Mixed,_incl._4Fe-4S_dicluster_domain,_and_Transglycosylase


id: CL:72
description: Translation, and RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:72_Translation,_and_RNA_metabolic_process


id: CL:725
description: Alanine metabolic process, and Recombinational repair
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:725_Alanine_metabolic_process,_and_Recombinational_repair


id: CL:735
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and PD-(D/E)XK nuclease superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:735_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_PD-(D/E)XK_nuclease_superfamily


id: CL:737
description: Mixed, incl. PD-(D/E)XK nuclease superfamily, and Nucleotidyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:737_Mixed,_incl._PD-(D/E)XK_nuclease_superfamily,_and_Nucleotidyl_transferase


id: CL:759
description: Mixed, incl. PDZ domain 6, and NUDIX hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:759_Mixed,_incl._PDZ_domain_6,_and_NUDIX_hydrolase


id: CL:774
description: Mixed, incl. Heme biosynthetic process, and Chromosome segregation
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:774_Mixed,_incl._Heme_biosynthetic_process,_and_Chromosome_segregation


id: CL:775
description: Mixed, incl. Protoporphyrinogen IX metabolic process, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:775_Mixed,_incl._Protoporphyrinogen_IX_metabolic_process,_and_AAA_domain


id: CL:777
description: Mixed, incl. MnmG, N-terminal domain, and RNA (guanine-N7)-methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:777_Mixed,_incl._MnmG,_N-terminal_domain,_and_RNA_(guanine-N7)-methylation


id: CL:78
description: Mixed, incl. Ribonucleoprotein, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:78_Mixed,_incl._Ribonucleoprotein,_and_Regulation_of_translation


id: CL:787
description: Protoporphyrinogen IX metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:787_Protoporphyrinogen_IX_metabolic_process


id: CL:796
description: Mixed, incl. Radical SAM, and Invasion protein B
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:796_Mixed,_incl._Radical_SAM,_and_Invasion_protein_B


id: CL:80
description: Ribosomal protein, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:80_Ribosomal_protein,_and_Regulation_of_translation


id: CL:809
description: Mixed, incl. Lipopolysaccharide biosynthesis, and Membrane organization
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:809_Mixed,_incl._Lipopolysaccharide_biosynthesis,_and_Membrane_organization


id: CL:810
description: Mixed, incl. Lipopolysaccharide biosynthesis, and Membrane organization
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:810_Mixed,_incl._Lipopolysaccharide_biosynthesis,_and_Membrane_organization


id: CL:811
description: Lipopolysaccharide biosynthesis, and Membrane organization
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:811_Lipopolysaccharide_biosynthesis,_and_Membrane_organization


id: CL:812
description: Mixed, incl. Lipopolysaccharide biosynthesis, and Lipopolysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:812_Mixed,_incl._Lipopolysaccharide_biosynthesis,_and_Lipopolysaccharide_transport


id: CL:83
description: Ribosomal protein, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:83_Ribosomal_protein,_and_Regulation_of_translation


id: CL:834
description: Mixed, incl. Lipopolysaccharide transport, and Permease LptG/LptF-related
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:834_Mixed,_incl._Lipopolysaccharide_transport,_and_Permease_LptG/LptF-related


id: CL:836
description: Permease LptG/LptF-related, and Lipopolysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:836_Permease_LptG/LptF-related,_and_Lipopolysaccharide_transport


id: CL:855
description: Protein insertion into membrane, and Outer membrane protein beta-barrel domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:855_Protein_insertion_into_membrane,_and_Outer_membrane_protein_beta-barrel_domain


id: CL:86
description: Ribosomal protein, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:86_Ribosomal_protein,_and_Translation_regulator_activity


id: CL:871
description: Mixed, incl. Periplasm, and PP-loop family
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:871_Mixed,_incl._Periplasm,_and_PP-loop_family


id: CL:873
description: Mixed, incl. Periplasm, and MotA/TolQ/ExbB proton channel
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:873_Mixed,_incl._Periplasm,_and_MotA/TolQ/ExbB_proton_channel


id: CL:898
description: Mixed, incl. Import into cell, and Ribonuclease E/G
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:898_Mixed,_incl._Import_into_cell,_and_Ribonuclease_E/G


id: CL:910
description: Mixed, incl. Mtb iron assimilation by chelation, and Rhodanese-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:910_Mixed,_incl._Mtb_iron_assimilation_by_chelation,_and_Rhodanese-like_domain_superfamily


id: CL:911
description: Mixed, incl. Mtb iron assimilation by chelation, and Rhodanese-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:911_Mixed,_incl._Mtb_iron_assimilation_by_chelation,_and_Rhodanese-like_domain_superfamily


id: CL:913
description: Mixed, incl. Response to superoxide, and DNA photolyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:913_Mixed,_incl._Response_to_superoxide,_and_DNA_photolyase_activity


id: CL:931
description: Mixed, incl. Lipoprotein metabolic process, and Transporter associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:931_Mixed,_incl._Lipoprotein_metabolic_process,_and_Transporter_associated_domain


id: CL:945
description: Mixed, incl. Mtb iron assimilation by chelation, and RNA 3-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:945_Mixed,_incl._Mtb_iron_assimilation_by_chelation,_and_RNA_3-end_processing


id: CL:960
description: Mostly uncharacterized, incl. Stress response, and Cell wall organization
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:960_Mostly_uncharacterized,_incl._Stress_response,_and_Cell_wall_organization


id: CL:961
description: Mostly uncharacterized, incl. Cell wall organization, and Cobaltochelatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:961_Mostly_uncharacterized,_incl._Cell_wall_organization,_and_Cobaltochelatase_activity


id: CL:963
description: Mostly uncharacterized, incl. Cobaltochelatase activity, and HAD-hyrolase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:963_Mostly_uncharacterized,_incl._Cobaltochelatase_activity,_and_HAD-hyrolase-like


id: CL:965
description: Mostly uncharacterized, incl. Cobaltochelatase activity, and HAD-hyrolase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:965_Mostly_uncharacterized,_incl._Cobaltochelatase_activity,_and_HAD-hyrolase-like


id: CL:967
description: Mostly uncharacterized, incl. HAD-hyrolase-like, and dephospho-CoA kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:967_Mostly_uncharacterized,_incl._HAD-hyrolase-like,_and_dephospho-CoA_kinase_activity


id: CL:969
description: Mixed, incl. dephospho-CoA kinase activity, and Protein of unknown function DUF1058
name:
  Local Network Cluster (STRING).STRING_v12.0_420998_STRINGid_CL:969_Mixed,_incl._dephospho-CoA_kinase_activity,_and_Protein_of_unknown_function_DUF1058


id: GO:0000462
description: Maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
memo: https://amigo.geneontology.org/amigo/term/GO:0000462
golevel: 11
name:
  GOBP.STRING_v12.0_420998_STRINGid_GO:0000462_Maturation_of_SSU-rRNA_from_tricistronic_rRNA_transcript_(SSU-rRNA,_5.8S_rRNA,_LSU-rRNA)


id: GO:0000701
description: Purine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0000701
golevel: 7
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0000701_Purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 10
name:
  GOBP.STRING_v12.0_420998_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0000724
description: Double-strand break repair via homologous recombination
memo: https://amigo.geneontology.org/amigo/term/GO:0000724
golevel: 9
name:
  GOBP.STRING_v12.0_420998_STRINGid_GO:0000724_Double-strand_break_repair_via_homologous_recombination


id: GO:0000820
description: Regulation of glutamine family amino acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0000820
golevel: 9
name:
  GOBP.STRING_v12.0_420998_STRINGid_GO:0000820_Regulation_of_glutamine_family_amino_acid_metabolic_process


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0003825
description: Alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003825
golevel: 7
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0003825_Alpha,alpha-trehalose-phosphate_synthase_(UDP-forming)_activity


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003871
description: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003871
golevel: 6
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0003871_5-methyltetrahydropteroyltriglutamate-homocysteine_S-methyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 4
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 6
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 5
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0003961
description: O-acetylhomoserine aminocarboxypropyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003961
golevel: 4
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0003961_O-acetylhomoserine_aminocarboxypropyltransferase_activity


id: GO:0003992
description: N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003992
golevel: 5
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0003992_N2-acetyl-L-ornithine:2-oxoglutarate_5-aminotransferase_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004174
description: Electron-transferring-flavoprotein dehydrogenase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004174
golevel: 5
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0004174_Electron-transferring-flavoprotein_dehydrogenase_activity


id: GO:0004316
description: 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004316
golevel: 6
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0004316_3-oxoacyl-[acyl-carrier-protein]_reductase_(NADPH)_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
golevel: 6
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
golevel: 5
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 6
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004591
description: Oxoglutarate dehydrogenase (succinyl-transferring) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004591
golevel: 5
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0004591_Oxoglutarate_dehydrogenase_(succinyl-transferring)_activity


id: GO:0004604
description: Phosphoadenylyl-sulfate reductase (thioredoxin) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004604
golevel: 5
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0004604_Phosphoadenylyl-sulfate_reductase_(thioredoxin)_activity


id: GO:0004616
description: Phosphogluconate dehydrogenase (decarboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004616
golevel: 5
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0004616_Phosphogluconate_dehydrogenase_(decarboxylating)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004648
description: O-phospho-L-serine:2-oxoglutarate aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004648
golevel: 5
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0004648_O-phospho-L-serine:2-oxoglutarate_aminotransferase_activity


id: GO:0004719
description: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004719
golevel: 8
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0004719_protein-L-isoaspartate_(D-aspartate)_O-methyltransferase_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_420998_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 11
name:
  GOBP.STRING_v12.0_420998_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0008124
description: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008124
golevel: 5
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0008124_4-alpha-hydroxytetrahydrobiopterin_dehydratase_activity


id: GO:0008271
description: Secondary active sulfate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008271
golevel: 6
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0008271_Secondary_active_sulfate_transmembrane_transporter_activity


id: GO:0008425
description: 2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008425
golevel: 7
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0008425_2-polyprenyl-6-methoxy-1,4-benzoquinone_methyltransferase_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 7
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008657
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008657
golevel: 4
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0008657_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_inhibitor_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
golevel: 5
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008666
description: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008666
golevel: 7
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0008666_2,3,4,5-tetrahydropyridine-2,6-dicarboxylate_N-succinyltransferase_activity


id: GO:0008674
description: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008674
golevel: 5
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0008674_2-dehydro-3-deoxy-6-phosphogalactonate_aldolase_activity


id: GO:0008685
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008685
golevel: 4
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0008685_2-C-methyl-D-erythritol_2,4-cyclodiphosphate_synthase_activity


id: GO:0008690
description: 3-deoxy-manno-octulosonate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008690
golevel: 6
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0008690_3-deoxy-manno-octulosonate_cytidylyltransferase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
golevel: 6
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008697
description: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008697
golevel: 5
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0008697_4-deoxy-L-threo-5-hexosulose-uronate_ketol-isomerase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008759
description: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008759
golevel: 5
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0008759_UDP-3-O-[3-hydroxymyristoyl]_N-acetylglucosamine_deacetylase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_420998_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


