# pathwayInfo

id: PF03900
description: Porphobilinogen deaminase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03900
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF03900_Porphobilinogen_deaminase,_C-terminal_domain


id: PF03989
description: DNA gyrase C-terminal domain, beta-propeller
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03989
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF03989_DNA_gyrase_C-terminal_domain,_beta-propeller


id: PF04020
description: Mycobacterial 4 TMS phage holin, superfamily IV
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04020
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF04020_Mycobacterial_4_TMS_phage_holin,_superfamily_IV


id: PF04039
description: Domain related to MnhB subunit of Na+/H+ antiporter
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04039
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF04039_Domain_related_to_MnhB_subunit_of_Na+/H+_antiporter


id: PF04066
description: Multiple resistance and pH regulation protein F (MrpF / PhaF)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04066
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF04066_Multiple_resistance_and_pH_regulation_protein_F_(MrpF_/_PhaF)


id: PF04069
description: Substrate binding domain of ABC-type glycine betaine transport system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04069
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF04069_Substrate_binding_domain_of_ABC-type_glycine_betaine_transport_system


id: PF04079
description: Segregation and condensation complex subunit ScpB
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04079
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF04079_Segregation_and_condensation_complex_subunit_ScpB


id: PF04101
description: Glycosyltransferase family 28 C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04101
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF04101_Glycosyltransferase_family_28_C-terminal_domain


id: PF04127
description: DNA / pantothenate metabolism flavoprotein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04127
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF04127_DNA_/_pantothenate_metabolism_flavoprotein


id: PF04307
description: LexA-binding, inner membrane-associated putative hydrolase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04307
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF04307_LexA-binding,_inner_membrane-associated_putative_hydrolase


id: PF04602
description: Mycobacterial cell wall arabinan synthesis protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04602
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF04602_Mycobacterial_cell_wall_arabinan_synthesis_protein


id: PF04655
description: Aminoglycoside/hydroxyurea antibiotic resistance kinase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04655
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF04655_Aminoglycoside/hydroxyurea_antibiotic_resistance_kinase


id: PF04679
description: ATP dependent DNA ligase C terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04679
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF04679_ATP_dependent_DNA_ligase_C_terminal_region________


id: PF04715
description: Anthranilate synthase component I, N terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04715
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF04715_Anthranilate_synthase_component_I,_N_terminal_region


id: PF04734
description: Neutral/alkaline non-lysosomal ceramidase, N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04734
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF04734_Neutral/alkaline_non-lysosomal_ceramidase,_N-terminal


id: PF04760
description: Translation initiation factor IF-2, N-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04760
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF04760_Translation_initiation_factor_IF-2,_N-terminal_region


id: PF04883
description: Bacteriophage HK97-gp10, putative tail-component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04883
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF04883_Bacteriophage_HK97-gp10,_putative_tail-component


id: PF05108
description: Type VII secretion system ESX-1, transport TM domain B
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05108
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF05108_Type_VII_secretion_system_ESX-1,_transport_TM_domain_B


id: PF05173
description: Dihydrodipicolinate reductase, C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05173
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF05173_Dihydrodipicolinate_reductase,_C-terminus


id: PF05198
description: Translation initiation factor IF-3, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05198
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF05198_Translation_initiation_factor_IF-3,_N-terminal_domain


id: PF05201
description: Glutamyl-tRNAGlu reductase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05201
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF05201_Glutamyl-tRNAGlu_reductase,_N-terminal_domain


id: PF05223
description: NTF2-like N-terminal transpeptidase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05223
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF05223_NTF2-like_N-terminal_transpeptidase_domain


id: PF05362
description: Lon protease (S16) C-terminal proteolytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05362
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF05362_Lon_protease_(S16)_C-terminal_proteolytic_domain


id: PF05378
description: Hydantoinase/oxoprolinase N-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05378
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF05378_Hydantoinase/oxoprolinase_N-terminal_region


id: PF05437
description: Branched-chain amino acid transport protein (AzlD)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05437
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF05437_Branched-chain_amino_acid_transport_protein_(AzlD)


id: PF05698
description: Bacterial trigger factor protein (TF) C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05698
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF05698_Bacterial_trigger_factor_protein_(TF)_C-terminus


id: PF05787
description: Bacterial protein of unknown function (DUF839)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05787
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF05787_Bacterial_protein_of_unknown_function_(DUF839)


id: PF05949
description: Bacterial protein of unknown function (DUF881)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05949
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF05949_Bacterial_protein_of_unknown_function_(DUF881)


id: PF05985
description: Ethanolamine ammonia-lyase light chain (EutC)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05985
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF05985_Ethanolamine_ammonia-lyase_light_chain_(EutC)


id: PF06240
description: Carbon monoxide dehydrogenase subunit G (CoxG)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06240
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF06240_Carbon_monoxide_dehydrogenase_subunit_G_(CoxG)


id: PF06305
description: Lipopolysaccharide assembly protein A domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06305
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF06305_Lipopolysaccharide_assembly_protein_A_domain


id: PF06325
description: Ribosomal protein L11 methyltransferase (PrmA)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06325
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF06325_Ribosomal_protein_L11_methyltransferase_(PrmA)


id: PF06751
description: Ethanolamine ammonia lyase large subunit (EutB)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06751
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF06751_Ethanolamine_ammonia_lyase_large_subunit_(EutB)


id: PF06772
description: Bacterial low temperature requirement A protein (LtrA)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06772
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF06772_Bacterial_low_temperature_requirement_A_protein_(LtrA)


id: PF06779
description: Uncharacterised MFS-type transporter YbfB
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06779
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF06779_Uncharacterised_MFS-type_transporter_YbfB


id: PF06833
description: Malonate decarboxylase gamma subunit (MdcE)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06833
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF06833_Malonate_decarboxylase_gamma_subunit_(MdcE)


id: PF06983
description: 3-demethylubiquinone-9 3-methyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06983
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF06983_3-demethylubiquinone-9_3-methyltransferase


id: PF07287
description: Acyclic terpene utilisation family protein AtuA
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07287
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF07287_Acyclic_terpene_utilisation_family_protein_AtuA


id: PF07332
description: Putative Actinobacterial Holin-X, holin superfamily III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07332
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF07332_Putative_Actinobacterial_Holin-X,_holin_superfamily_III


id: PF07479
description: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07479
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF07479_NAD-dependent_glycerol-3-phosphate_dehydrogenase_C-terminus


id: PF07498
description: Rho termination factor, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07498
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF07498_Rho_termination_factor,_N-terminal_domain


id: PF07521
description: Zn-dependent metallo-hydrolase RNA specificity domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07521
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF07521_Zn-dependent_metallo-hydrolase_RNA_specificity_domain


id: PF07669
description: Eco57I restriction-modification methylase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07669
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF07669_Eco57I_restriction-modification_methylase


id: PF07685
description: CobB/CobQ-like glutamine amidotransferase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07685
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF07685_CobB/CobQ-like_glutamine_amidotransferase_domain


id: PF07717
description: Oligonucleotide/oligosaccharide-binding (OB)-fold
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07717
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF07717_Oligonucleotide/oligosaccharide-binding_(OB)-fold


id: PF07733
description: Bacterial DNA polymerase III alpha NTPase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07733
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF07733_Bacterial_DNA_polymerase_III_alpha_NTPase_domain


id: PF07905
description: Purine catabolism regulatory protein-like family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07905
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF07905_Purine_catabolism_regulatory_protein-like_family


id: PF07931
description: Chloramphenicol phosphotransferase-like protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07931
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF07931_Chloramphenicol_phosphotransferase-like_protein


id: PF07992
description: Pyridine nucleotide-disulphide oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07992
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF07992_Pyridine_nucleotide-disulphide_oxidoreductase


id: PF08021
description: Siderophore-interacting FAD-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08021
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF08021_Siderophore-interacting_FAD-binding_domain


id: PF08028
description: Acyl-CoA dehydrogenase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08028
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF08028_Acyl-CoA_dehydrogenase,_C-terminal_domain


id: PF08207
description: Elongation factor P (EF-P) KOW-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08207
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF08207_Elongation_factor_P_(EF-P)_KOW-like_domain


id: PF08267
description: Cobalamin-independent synthase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08267
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF08267_Cobalamin-independent_synthase,_N-terminal_domain


id: PF08275
description: DNA primase catalytic core, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08275
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF08275_DNA_primase_catalytic_core,_N-terminal_domain


id: PF08327
description: Activator of Hsp90 ATPase homolog 1-like protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08327
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF08327_Activator_of_Hsp90_ATPase_homolog_1-like_protein


id: PF08352
description: Oligopeptide/dipeptide transporter, C-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08352
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF08352_Oligopeptide/dipeptide_transporter,_C-terminal_region


id: PF08436
description: 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08436
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF08436_1-deoxy-D-xylulose_5-phosphate_reductoisomerase_C-terminal_domain


id: PF08501
description: Shikimate dehydrogenase substrate binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08501
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF08501_Shikimate_dehydrogenase_substrate_binding_domain


id: PF08541
description: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08541
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF08541_3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III_C_terminal__


id: PF08545
description: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08545
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF08545_3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III


id: PF08669
description: Glycine cleavage T-protein C-terminal barrel domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08669
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF08669_Glycine_cleavage_T-protein_C-terminal_barrel_domain


id: PF08817
description: WXG100 protein secretion system (Wss), protein YukD
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08817
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF08817_WXG100_protein_secretion_system_(Wss),_protein_YukD


id: PF09142
description: tRNA Pseudouridine synthase II, C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09142
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF09142_tRNA_Pseudouridine_synthase_II,_C_terminal


id: PF09290
description: Prokaryotic acetaldehyde dehydrogenase, dimerisation
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09290
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF09290_Prokaryotic_acetaldehyde_dehydrogenase,_dimerisation


id: PF09296
description: NADH pyrophosphatase-like rudimentary NUDIX domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09296
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF09296_NADH_pyrophosphatase-like_rudimentary_NUDIX_domain


id: PF09489
description: Probable cobalt transporter subunit (CbtB)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09489
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF09489_Probable_cobalt_transporter_subunit_(CbtB)


id: PF09490
description: Probable cobalt transporter subunit (CbtA)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09490
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF09490_Probable_cobalt_transporter_subunit_(CbtA)


id: PF09534
description: Tryptophan-associated transmembrane protein (Trp_oprn_chp)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09534
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF09534_Tryptophan-associated_transmembrane_protein_(Trp_oprn_chp)


id: PF09604
description: F subunit of K+-transporting ATPase (Potass_KdpF)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09604
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF09604_F_subunit_of_K+-transporting_ATPase_(Potass_KdpF)


id: PF09678
description: Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09678
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF09678_Cytochrome_c_oxidase_caa3_assembly_factor_(Caa3_CtaG)


id: PF09848
description: Schlafen group 3, DNA/RNA helicase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09848
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF09848_Schlafen_group_3,_DNA/RNA_helicase_domain


id: PF09859
description: Oxygenase, catalysing oxidative methylation of damaged DNA
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09859
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF09859_Oxygenase,_catalysing_oxidative_methylation_of_damaged_DNA


id: PF10009
description: Uncharacterized protein conserved in bacteria (DUF2252)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10009
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF10009_Uncharacterized_protein_conserved_in_bacteria_(DUF2252)


id: PF10017
description: Histidine-specific methyltransferase, SAM-dependent
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10017
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF10017_Histidine-specific_methyltransferase,_SAM-dependent


id: PF10041
description: Uncharacterized conserved protein (DUF2277)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10041
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF10041_Uncharacterized_conserved_protein_(DUF2277)


id: PF10069
description: Sensory domain in DIguanylate Cyclases and Two-component system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10069
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF10069_Sensory_domain_in_DIguanylate_Cyclases_and_Two-component_system


id: PF10096
description: Uncharacterized protein conserved in bacteria (DUF2334)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10096
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF10096_Uncharacterized_protein_conserved_in_bacteria_(DUF2334)


id: PF10117
description: McrBC 5-methylcytosine restriction system component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10117
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF10117_McrBC_5-methylcytosine_restriction_system_component


id: PF10128
description: Glucose-6-phosphate dehydrogenase subunit N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10128
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF10128_Glucose-6-phosphate_dehydrogenase_subunit_N-terminal_domain


id: PF10385
description: RNA polymerase beta subunit external 1 domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10385
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF10385_RNA_polymerase_beta_subunit_external_1_domain


id: PF10418
description: Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10418
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF10418_Iron-sulfur_cluster_binding_domain_of_dihydroorotate_dehydrogenase_B


id: PF10509
description: Galactokinase galactose-binding signature
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10509
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF10509_Galactokinase_galactose-binding_signature


id: PF10555
description: Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10555
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF10555_Phospho-N-acetylmuramoyl-pentapeptide-transferase_signature_1_


id: PF10590
description: Pyridoxine 5-phosphate oxidase C-terminal dimerisation region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10590
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF10590_Pyridoxine_5-phosphate_oxidase_C-terminal_dimerisation_region


id: PF10604
description: Polyketide cyclase / dehydrase and lipid transport
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10604
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF10604_Polyketide_cyclase_/_dehydrase_and_lipid_transport


id: PF10635
description: DisA bacterial checkpoint controller linker region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10635
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF10635_DisA_bacterial_checkpoint_controller_linker_region_


id: PF10722
description: Putative bacterial sensory transduction regulator
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10722
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF10722_Putative_bacterial_sensory_transduction_regulator


id: PF10824
description: Excreted virulence factor EspC, type VII ESX diderm
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10824
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF10824_Excreted_virulence_factor_EspC,_type_VII_ESX_diderm


id: PF11203
description: Putative type VII ESX secretion system translocon, EccE
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11203
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF11203_Putative_type_VII_ESX_secretion_system_translocon,_EccE


id: PF11382
description: Copper transport outer membrane protein, MctB
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11382
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF11382_Copper_transport_outer_membrane_protein,_MctB


id: PF11512
description: Agrobacterium tumefaciens protein Atu4866
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11512
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF11512_Agrobacterium_tumefaciens_protein_Atu4866


id: PF11716
description: Mycothiol maleylpyruvate isomerase N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11716
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF11716_Mycothiol_maleylpyruvate_isomerase_N-terminal_domain


id: PF11887
description: Cholesterol uptake porter CUP1 of Mce4, putative
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11887
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF11887_Cholesterol_uptake_porter_CUP1_of_Mce4,_putative


id: PF12089
description: Transmembrane domain of unknown function (DUF3566)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12089
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF12089_Transmembrane_domain_of_unknown_function_(DUF3566)


id: PF12169
description: DNA polymerase III subunits gamma and tau domain III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12169
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF12169_DNA_polymerase_III_subunits_gamma_and_tau_domain_III


id: PF12172
description: Rubredoxin-like zinc ribbon domain (DUF35_N)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12172
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF12172_Rubredoxin-like_zinc_ribbon_domain_(DUF35_N)


id: PF12391
description: Protocatechuate 3,4-dioxygenase beta subunit N terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12391
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF12391_Protocatechuate_3,4-dioxygenase_beta_subunit_N_terminal


id: PF12399
description: Branched-chain amino acid ATP-binding cassette transporter
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12399
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF12399_Branched-chain_amino_acid_ATP-binding_cassette_transporter


id: PF12625
description: Arabinose-binding domain of AraC transcription regulator, N-term
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12625
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF12625_Arabinose-binding_domain_of_AraC_transcription_regulator,_N-term


id: PF12627
description: Probable RNA and SrmB- binding site of polymerase A
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12627
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF12627_Probable_RNA_and_SrmB-_binding_site_of_polymerase_A


id: PF12769
description: 4TM region of pyridine nucleotide transhydrogenase, mitoch
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12769
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF12769_4TM_region_of_pyridine_nucleotide_transhydrogenase,_mitoch


id: PF12850
description: Calcineurin-like phosphoesterase superfamily domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12850
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF12850_Calcineurin-like_phosphoesterase_superfamily_domain


id: PF12911
description: N-terminal TM domain of oligopeptide transport permease C
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12911
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF12911_N-terminal_TM_domain_of_oligopeptide_transport_permease_C


id: PF12974
description: ABC transporter, phosphonate, periplasmic substrate-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12974
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF12974_ABC_transporter,_phosphonate,_periplasmic_substrate-binding_protein_


id: PF13085
description: 2Fe-2S iron-sulfur cluster binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13085
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF13085_2Fe-2S_iron-sulfur_cluster_binding_domain


id: PF13231
description: Dolichyl-phosphate-mannose-protein mannosyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13231
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF13231_Dolichyl-phosphate-mannose-protein_mannosyltransferase


id: PF13304
description: AAA domain, putative AbiEii toxin, Type IV TA system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13304
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF13304_AAA_domain,_putative_AbiEii_toxin,_Type_IV_TA_system


id: PF13335
description: Magnesium chelatase, subunit ChlI C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13335
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF13335_Magnesium_chelatase,_subunit_ChlI_C-terminal


id: PF13336
description: Acetyl-CoA hydrolase/transferase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13336
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF13336_Acetyl-CoA_hydrolase/transferase_C-terminal_domain


id: PF13340
description: Putative transposase of IS4/5 family (DUF4096)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13340
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF13340_Putative_transposase_of_IS4/5_family_(DUF4096)


id: PF13376
description: Bacteriocin-protection, YdeI or OmpD-Associated
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13376
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF13376_Bacteriocin-protection,_YdeI_or_OmpD-Associated


id: PF13399
description: LytR cell envelope-related transcriptional attenuator
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13399
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF13399_LytR_cell_envelope-related_transcriptional_attenuator


id: PF13409
description: Glutathione S-transferase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13409
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF13409_Glutathione_S-transferase,_N-terminal_domain


id: PF13410
description: Glutathione S-transferase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13410
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF13410_Glutathione_S-transferase,_C-terminal_domain


id: PF13442
description: Cytochrome C oxidase, cbb3-type, subunit III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13442
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF13442_Cytochrome_C_oxidase,_cbb3-type,_subunit_III_


id: PF13531
description: Bacterial extracellular solute-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13531
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF13531_Bacterial_extracellular_solute-binding_protein


id: PF13607
description: Succinyl-CoA ligase like flavodoxin domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13607
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF13607_Succinyl-CoA_ligase_like_flavodoxin_domain


id: PF13653
description: Glycerophosphoryl diester phosphodiesterase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13653
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF13653_Glycerophosphoryl_diester_phosphodiesterase_family


id: PF13669
description: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13669
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF13669_Glyoxalase/Bleomycin_resistance_protein/Dioxygenase_superfamily


id: PF13738
description: Pyridine nucleotide-disulphide oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13738
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF13738_Pyridine_nucleotide-disulphide_oxidoreductase


id: PF13794
description: tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)-like
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13794
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF13794_tRNA-(MS[2]IO[6]A)-hydroxylase_(MiaE)-like


id: PF13977
description: BetI-type transcriptional repressor, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13977
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF13977_BetI-type_transcriptional_repressor,_C-terminal


id: PF14226
description: Non-haem dioxygenase in morphine synthesis N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14226
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF14226_Non-haem_dioxygenase_in_morphine_synthesis_N-terminal


id: PF14572
description: Phosphoribosyl synthetase-associated domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14572
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF14572_Phosphoribosyl_synthetase-associated_domain


id: PF14602
description: Hexapeptide repeat of succinyl-transferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14602
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF14602_Hexapeptide_repeat_of_succinyl-transferase


id: PF14691
description: Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14691
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF14691_Dihydroprymidine_dehydrogenase_domain_II,_4Fe-4S_cluster


id: PF14711
description: Respiratory nitrate reductase beta C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14711
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF14711_Respiratory_nitrate_reductase_beta_C-terminal


id: PF14720
description: NiFe/NiFeSe hydrogenase small subunit C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14720
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF14720_NiFe/NiFeSe_hydrogenase_small_subunit_C-terminal


id: PF14748
description: Pyrroline-5-carboxylate reductase dimerisation
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14748
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF14748_Pyrroline-5-carboxylate_reductase_dimerisation


id: PF14789
description: Tetrahydrodipicolinate N-succinyltransferase middle
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14789
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF14789_Tetrahydrodipicolinate_N-succinyltransferase_middle


id: PF14801
description: tRNA methyltransferase complex GCD14 subunit N-term
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14801
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF14801_tRNA_methyltransferase_complex_GCD14_subunit_N-term


id: PF14833
description: NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14833
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF14833_NAD-binding_of_NADP-dependent_3-hydroxyisobutyrate_dehydrogenase


id: PF16192
description: C-terminal four TMM region of protein-O-mannosyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16192
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF16192_C-terminal_four_TMM_region_of_protein-O-mannosyltransferase_


id: PF16198
description: tRNA pseudouridylate synthase B C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16198
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF16198_tRNA_pseudouridylate_synthase_B_C-terminal_domain


id: PF16320
description: Ribosomal protein L7/L12 dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16320
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF16320_Ribosomal_protein_L7/L12_dimerisation_domain


id: PF16321
description: Sigma 54 modulation/S30EA ribosomal protein C terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16321
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF16321_Sigma_54_modulation/S30EA_ribosomal_protein_C_terminus


id: PF16658
description: Class II release factor RF3, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16658
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF16658_Class_II_release_factor_RF3,_C-terminal_domain


id: PF16670
description: Phosphoinositide phospholipase C, Ca2+-dependent
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16670
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF16670_Phosphoinositide_phospholipase_C,_Ca2+-dependent


id: PF16751
description: Anti-sigma-D factor RsdA to sigma factor binding region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16751
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF16751_Anti-sigma-D_factor_RsdA_to_sigma_factor_binding_region


id: PF16859
description: Tetracyclin repressor-like, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16859
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF16859_Tetracyclin_repressor-like,_C-terminal_domain


id: PF16881
description: N-terminal domain of lipoyl synthase of Radical_SAM family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16881
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF16881_N-terminal_domain_of_lipoyl_synthase_of_Radical_SAM_family


id: PF16901
description: C-terminal domain of alpha-glycerophosphate oxidase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16901
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF16901_C-terminal_domain_of_alpha-glycerophosphate_oxidase


id: PF16918
description: Protein kinase G tetratricopeptide repeat
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16918
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF16918_Protein_kinase_G_tetratricopeptide_repeat


id: PF16995
description: Transmembrane region of lysyl-tRNA synthetase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16995
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF16995_Transmembrane_region_of_lysyl-tRNA_synthetase


id: PF17048
description: Neutral/alkaline non-lysosomal ceramidase, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17048
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF17048_Neutral/alkaline_non-lysosomal_ceramidase,_C-terminal


id: PF17136
description: Ribosomal proteins 50S L24/mitochondrial 39S L24
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17136
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF17136_Ribosomal_proteins_50S_L24/mitochondrial_39S_L24


id: PF17147
description: Pyruvate:ferredoxin oxidoreductase core domain II
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17147
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF17147_Pyruvate:ferredoxin_oxidoreductase_core_domain_II


id: PF17297
description: Phosphoenolpyruvate carboxykinase N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17297
name:
  Protein Domains (Pfam).STRING_v12.0_43767_STRINGid_PF17297_Phosphoenolpyruvate_carboxykinase_N-terminal_domain


id: SM00044
description: Adenylyl- / guanylyl cyclase, catalytic domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00044
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00044_Adenylyl-_/_guanylyl_cyclase,_catalytic_domain


id: SM00046
description: Diacylglycerol kinase catalytic domain (presumed)
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00046
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00046_Diacylglycerol_kinase_catalytic_domain_(presumed)


id: SM00062
description: Bacterial periplasmic substrate-binding proteins
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00062
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00062_Bacterial_periplasmic_substrate-binding_proteins


id: SM00065
description: Domain present in phytochromes and cGMP-specific phosphodiesterases.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00065
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00065_Domain_present_in_phytochromes_and_cGMP-specific_phosphodiesterases.


id: SM00089
description: Repeats in polycystic kidney disease 1 (PKD1) and other proteins
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00089
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00089_Repeats_in_polycystic_kidney_disease_1_(PKD1)_and_other_proteins


id: SM00100
description: Cyclic nucleotide-monophosphate binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00100
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00100_Cyclic_nucleotide-monophosphate_binding_domain


id: SM00116
description: Domain in cystathionine beta-synthase and other proteins.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00116
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00116_Domain_in_cystathionine_beta-synthase_and_other_proteins.


id: SM00220
description: Serine/Threonine protein kinases, catalytic domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00220
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00220_Serine/Threonine_protein_kinases,_catalytic_domain


id: SM00228
description: Domain present in PSD-95, Dlg, and ZO-1/2.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00228
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00228_Domain_present_in_PSD-95,_Dlg,_and_ZO-1/2.


id: SM00271
description: DnaJ molecular chaperone homology domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00271
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00271_DnaJ_molecular_chaperone_homology_domain


id: SM00278
description: Helix-hairpin-helix DNA-binding motif class 1
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00278
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00278_Helix-hairpin-helix_DNA-binding_motif_class_1


id: SM00279
description: Helix-hairpin-helix class 2 (Pol1 family) motifs
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00279
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00279_Helix-hairpin-helix_class_2_(Pol1_family)_motifs


id: SM00283
description: Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00283
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00283_Methyl-accepting_chemotaxis-like_domains_(chemotaxis_sensory_transducer).


id: SM00304
description: HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00304
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00304_HAMP_(Histidine_kinases,_Adenylyl_cyclases,_Methyl_binding_proteins,_Phosphatases)_domain


id: SM00316
description: Ribosomal protein S1-like RNA-binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00316
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00316_Ribosomal_protein_S1-like_RNA-binding_domain


id: SM00327
description: Von Willebrand factor (vWF) type A domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00327
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00327_Von_Willebrand_factor_(vWF)_type_A_domain


id: SM00342
description: Helix_turn_helix, arabinose operon control protein
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00342
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00342_Helix_turn_helix,_arabinose_operon_control_protein


id: SM00345
description: Helix_turn_helix gluconate operon transcriptional repressor
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00345
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00345_Helix_turn_helix_gluconate_operon_transcriptional_repressor


id: SM00346
description: Helix_turn_helix isocitrate lyase regulation
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00346
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00346_Helix_turn_helix_isocitrate_lyase_regulation


id: SM00347
description: Helix_turn_helix multiple antibiotic resistance protein
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00347
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00347_Helix_turn_helix_multiple_antibiotic_resistance_protein


id: SM00354
description: Helix_turn _helix lactose operon repressor
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00354
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00354_Helix_turn__helix_lactose_operon_repressor


id: SM00359
description: Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00359
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00359_Putative_RNA-binding_Domain_in_PseudoUridine_synthase_and_Archaeosine_transglycosylase


id: SM00382
description: ATPases associated with a variety of cellular activities
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00382
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00382_ATPases_associated_with_a_variety_of_cellular_activities


id: SM00384
description: DNA binding domain with preference for A/T rich regions
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00384
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00384_DNA_binding_domain_with_preference_for_A/T_rich_regions


id: SM00393
description: Putative single-stranded nucleic acids-binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00393
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00393_Putative_single-stranded_nucleic_acids-binding_domain


id: SM00411
description: Bacterial (prokaryotic) histone like domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00411
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00411_Bacterial_(prokaryotic)_histone_like_domain


id: SM00418
description: Helix_turn_helix, Arsenical Resistance Operon Repressor
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00418
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00418_Helix_turn_helix,_Arsenical_Resistance_Operon_Repressor


id: SM00419
description: Helix_turn_helix, cAMP Regulatory protein
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00419
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00419_Helix_turn_helix,_cAMP_Regulatory_protein


id: SM00420
description: Helix_turn_helix, Deoxyribose operon repressor
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00420
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00420_Helix_turn_helix,_Deoxyribose_operon_repressor


id: SM00436
description: Bacterial DNA topoisomeraes I ATP-binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00436
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00436_Bacterial_DNA_topoisomeraes_I_ATP-binding_domain


id: SM00437
description: Bacterial DNA topoisomerase I DNA-binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00437
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00437_Bacterial_DNA_topoisomerase_I_DNA-binding_domain


id: SM00471
description: Metal dependent phosphohydrolases with conserved HD motif.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00471
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00471_Metal_dependent_phosphohydrolases_with_conserved_HD_motif.


id: SM00479
description: Exonuclease domain in DNA-polymerase alpha and epsilon chain, ribonuclease T and other exonucleases
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00479
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00479_Exonuclease_domain_in_DNA-polymerase_alpha_and_epsilon_chain,_ribonuclease_T_and_other_exonucleases


id: SM00493
description: Topoisomerases, DnaG-type primases, OLD family nucleases and RecR proteins
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00493
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00493_Topoisomerases,_DnaG-type_primases,_OLD_family_nucleases_and_RecR_proteins


id: SM00525
description: Iron-sulpphur binding domain in DNA-(apurinic or apyrimidinic site) lyase (subfamily of ENDO3)
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00525
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00525_Iron-sulpphur_binding_domain_in_DNA-(apurinic_or_apyrimidinic_site)_lyase_(subfamily_of_ENDO3)


id: SM00529
description: Helix-turn-helix diphteria tox regulatory element
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00529
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00529_Helix-turn-helix_diphteria_tox_regulatory_element


id: SM00530
description: Helix-turn-helix XRE-family like proteins
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00530
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00530_Helix-turn-helix_XRE-family_like_proteins


id: SM00554
description: Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00554
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00554_Four_repeated_domains_in_the_Fasciclin_I_family_of_proteins,_present_in_many_other_contexts.


id: SM00559
description: Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00559
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00559_Ku70_and_Ku80_are_70kDa_and_80kDa_subunits_of_the_Lupus_Ku_autoantigen


id: SM00562
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00562
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00562_These_are_enzymes_that_catalyze_nonsubstrate_specific_conversions_of_nucleoside_diphosphates_to_nucleoside_triphosphates._These_enzymes_play_important_roles_in_bacterial_growth,_signal_transduction_and_pathogenicity.

description:
  These are enzymes that catalyze nonsubstrate specific conversions of nucleoside diphosphates to nucleoside triphosphates. These enzymes play important roles in bacterial growth, signal transduction and pathogenicity.


id: SM00670
description: Large family of predicted nucleotide-binding domains
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00670
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00670_Large_family_of_predicted_nucleotide-binding_domains


id: SM00701
description: Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00701
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00701_Animal_peptidoglycan_recognition_proteins_homologous_to_Bacteriophage_T3_lysozyme.


id: SM00729
description: Elongator protein 3, MiaB family, Radical SAM
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00729
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00729_Elongator_protein_3,_MiaB_family,_Radical_SAM


id: SM00738
description: In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00738
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00738_In_Spt5p,_this_domain_may_confer_affinity_for_Spt4p._It_possesses_a_RNP-like_fold.


id: SM00760
description: Bacterial dnaA protein helix-turn-helix domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00760
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00760_Bacterial_dnaA_protein_helix-turn-helix_domain


id: SM00827
description: Acyl transferase domain in polyketide synthase (PKS) enzymes.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00827
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00827_Acyl_transferase_domain_in_polyketide_synthase_(PKS)_enzymes.


id: SM00833
description: Cobalamin synthesis protein cobW C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00833
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00833_Cobalamin_synthesis_protein_cobW_C-terminal_domain


id: SM00839
description: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00839
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00839_Glutamate/Leucine/Phenylalanine/Valine_dehydrogenase


id: SM00840
description: This DALR domain is found in cysteinyl-tRNA-synthetases.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00840
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00840_This_DALR_domain_is_found_in_cysteinyl-tRNA-synthetases.


id: SM00843
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00843
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00843_This_domain_directs_oriented_DNA_translocation_and_forms_a_winged_helix_structure._Mutated_proteins_with_substitutions_in_the_FtsK_gamma_DNA-recognition_helix_are_impaired_in_DNA_binding.

description:
  This domain directs oriented DNA translocation and forms a winged helix structure. Mutated proteins with substitutions in the FtsK gamma DNA-recognition helix are impaired in DNA binding.


id: SM00846
description: Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00846
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00846_Glyceraldehyde_3-phosphate_dehydrogenase,_NAD_binding_domain


id: SM00847
description: Helicase associated domain (HA2) Add an annotation
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00847
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00847_Helicase_associated_domain_(HA2)__Add_an_annotation


id: SM00858
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00858
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00858_This_domain_family_includes_a_range_of_different_proteins._Such_as_antifreeze_proteins_and_flagellar_FlgA_proteins,_and_CpaB_pilus_proteins.

description:
  This domain family includes a range of different proteins. Such as antifreeze proteins and flagellar FlgA proteins, and CpaB pilus proteins.


id: SM00859
description: Semialdehyde dehydrogenase, NAD binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00859
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00859_Semialdehyde_dehydrogenase,_NAD_binding_domain


id: SM00861
description: Transketolase, pyrimidine binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00861
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00861_Transketolase,_pyrimidine_binding_domain


id: SM00862
description: Transcriptional regulatory protein, C terminal
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00862
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00862_Transcriptional_regulatory_protein,_C_terminal


id: SM00863
description: Threonyl and Alanyl tRNA synthetase second additional domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00863
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00863_Threonyl_and_Alanyl_tRNA_synthetase_second_additional_domain


id: SM00866
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00866
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00866_The_UbiC_transcription_regulator-associated_(UTRA)_domain_is_a_conserved_ligand-binding_domain_that_has_a_similar_fold_to_PUBMED:12757941._It_is_believed_to_modulate_activity_of_bacterial_transcription_factors_in_response_to_binding_small_molecules.

description:
  The UbiC transcription regulator-associated (UTRA) domain is a conserved ligand-binding domain that has a similar fold to PUBMED:12757941. It is believed to modulate activity of bacterial transcription factors in response to binding small molecules.


id: SM00870
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00870
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00870_Asparaginase,_which_is_found_in_various_plant,_animal_and_bacterial_cells,_catalyses_the_deamination_of_asparagine_to_yield_aspartic_acid_and_an_ammonium_ion,_resulting_in_a_depletion_of_free_circulatory_asparagine_in_plasma_PUBMED:3026924._The_...

description:
  Asparaginase, which is found in various plant, animal and bacterial cells, catalyses the deamination of asparagine to yield aspartic acid and an ammonium ion, resulting in a depletion of free circulatory asparagine in plasma PUBMED:3026924. The ...


id: SM00871
description: Bacterial transcription activator, effector binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00871
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00871_Bacterial_transcription_activator,_effector_binding_domain


id: SM00876
description: Biotin and Thiamin Synthesis associated domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00876
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00876_Biotin_and_Thiamin_Synthesis_associated_domain


id: SM00880
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00880
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00880_The_CHAD_domain_is_an_alpha-helical_domain_functionally_associated_with_some_members_of_the_adenylate_cyclase_family_._It_has_conserved_histidines_that_may_chelate_metals.

description:
  The CHAD domain is an alpha-helical domain functionally associated with some members of the adenylate cyclase family . It has conserved histidines that may chelate metals.


id: SM00895
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00895
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00895_This_entry_represents_the_C-terminal_ligand_binding_domain_of_many_members_of_the_GntR_family._This_domain_probably_binds_to_a_range_of_effector_molecules_that_regulate_the_transcription_of_genes_through_the_action_of_the_N-terminal_DNA-binding_...

description:
  This entry represents the C-terminal ligand binding domain of many members of the GntR family. This domain probably binds to a range of effector molecules that regulate the transcription of genes through the action of the N-terminal DNA-binding ...


id: SM00896
description: Ferredoxin-fold anticodon binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00896
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00896_Ferredoxin-fold_anticodon_binding_domain


id: SM00898
description: Formamidopyrimidine-DNA glycosylase N-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00898
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00898_Formamidopyrimidine-DNA_glycosylase_N-terminal_domain


id: SM00899
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00899
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00899_This_entry_represents_the_core_domain_of_the_ferrous_iron_(Fe2+)_transport_protein_FeoA_found_in_bacteria._This_domain_also_occurs_at_the_C-terminus_in_related_proteins._The_transporter_Feo_is_composed_of_three_proteins:_FeoA_a_small,_soluble_...

description:
  This entry represents the core domain of the ferrous iron (Fe2+) transport protein FeoA found in bacteria. This domain also occurs at the C-terminus in related proteins. The transporter Feo is composed of three proteins: FeoA a small, soluble ...


id: SM00922
description: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00922
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00922_Mandelate_racemase_/_muconate_lactonizing_enzyme,_C-terminal_domain


id: SM00926
description: Molybdopterin oxidoreductase Fe4S4 domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00926
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00926_Molybdopterin_oxidoreductase_Fe4S4_domain


id: SM00928
description: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00928
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00928_NADH-ubiquinone_oxidoreductase-F_iron-sulfur_binding_region


id: SM00929
description: NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00929
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00929_NADH-ubiquinone_oxidoreductase-G_iron-sulfur_binding_region


id: SM00934
description: Orotidine 5-phosphate decarboxylase / HUMPS family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00934
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00934_Orotidine_5-phosphate_decarboxylase_/_HUMPS_family


id: SM00937
description: This domain is found in peptide chain release factors.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00937
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00937_This_domain_is_found_in_peptide_chain_release_factors.


id: SM00939
description: X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00939
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00939_X-Pro_dipeptidyl-peptidase_C-terminal_non-catalytic_domain


id: SM00953
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00953
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00953_This_presumed_protein_contains_3_highly_conserved_polar_groups_that_could_form_an_active_site._These_are_an_arginine,_glutamate_and_serine,_hence_the_RES_domain._RES_is_found_widely_distributed_in_bacteria,_it_has_about_150_residues_in_length.

description:
  This presumed protein contains 3 highly conserved polar groups that could form an active site. These are an arginine, glutamate and serine, hence the RES domain. RES is found widely distributed in bacteria, it has about 150 residues in length.


id: SM00959
description: Rho termination factor, N-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00959
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00959_Rho_termination_factor,_N-terminal_domain


id: SM00963
description: SRP54-type protein, helical bundle domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00963
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00963_SRP54-type_protein,_helical_bundle_domain


id: SM00967
description: RNA 2-O ribose methyltransferase substrate binding
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00967
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00967_RNA_2-O_ribose_methyltransferase_substrate_binding


id: SM00982
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00982
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00982_This_domain_is_found_in_proteins_necessary_for_strand-specific_repair_in_DNA_such_as_TRCF_in_Escherichia_coli._A_lesion_in_the_template_strand_blocks_the_RNA_polymerase_complex_(RNAP)._The_RNAP-DNA-RNA_complex_is_specifically_recognised_by_the_...

description:
  This domain is found in proteins necessary for strand-specific repair in DNA such as TRCF in Escherichia coli. A lesion in the template strand blocks the RNA polymerase complex (RNAP). The RNAP-DNA-RNA complex is specifically recognised by the ...


id: SM00987
description: UreE urease accessory protein, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00987
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00987_UreE_urease_accessory_protein,_C-terminal_domain


id: SM00997
description: S-adenosyl-L-homocysteine hydrolase, NAD binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00997
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM00997_S-adenosyl-L-homocysteine_hydrolase,_NAD_binding_domain


id: SM01002
description: Alanine dehydrogenase/PNT, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01002
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM01002_Alanine_dehydrogenase/PNT,_C-terminal_domain


id: SM01003
description: Alanine dehydrogenase/PNT, N-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01003
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM01003_Alanine_dehydrogenase/PNT,_N-terminal_domain


id: SM01007
description: Class II Aldolase and Adducin N-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01007
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM01007_Class_II_Aldolase_and_Adducin_N-terminal_domain


id: SM01008
description: Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01008
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM01008_Aldehyde_oxidase_and_xanthine_dehydrogenase,_a/b_hammerhead_domain


id: SM01012
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01012
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM01012_ANTAR_(AmiR_and_NasR_transcription_antitermination_regulators)_is_an_RNA-binding_domain_found_in_bacterial_transcription_antitermination_regulatory_proteins._The_majority_of_the_domain_consists_of_a_coiled-coil.

description:
  ANTAR (AmiR and NasR transcription antitermination regulators) is an RNA-binding domain found in bacterial transcription antitermination regulatory proteins. The majority of the domain consists of a coiled-coil.


id: SM01043
description: Bacterial transcriptional activator domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01043
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM01043_Bacterial_transcriptional_activator_domain


id: SM01060
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01060
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM01060_Catalases_are_antioxidant_enzymes_that_catalyse_the_conversion_of_hydrogen_peroxide_to_water_and_molecular_oxygen,_serving_to_protect_cells_from_its_toxic_effects_PUBMED:11351128._Hydrogen_peroxide_is_produced_as_a_consequence_of_oxidative_cellular_...

description:
  Catalases are antioxidant enzymes that catalyse the conversion of hydrogen peroxide to water and molecular oxygen, serving to protect cells from its toxic effects PUBMED:11351128. Hydrogen peroxide is produced as a consequence of oxidative cellular ...


id: SM01072
description: Cell division protein 48 (CDC48) domain 2
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01072
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM01072_Cell_division_protein_48_(CDC48)_domain_2


id: SM01073
description: Cell division protein 48 (CDC48) N-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01073
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM01073_Cell_division_protein_48_(CDC48)_N-terminal_domain


id: SM01086
description: C-terminal, D2-small domain, of ClpB protein
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01086
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM01086_C-terminal,_D2-small_domain,_of_ClpB_protein


id: SM01092
description: CO dehydrogenase flavoprotein C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01092
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM01092_CO_dehydrogenase_flavoprotein_C-terminal_domain


id: SM01096
description: Carbamoyl-phosphate synthetase large chain, oligomerisation domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01096
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM01096_Carbamoyl-phosphate_synthetase_large_chain,_oligomerisation_domain


id: SM01097
description: Carbamoyl-phosphate synthase small chain, CPSase domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01097
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM01097_Carbamoyl-phosphate_synthase_small_chain,_CPSase_domain


id: SM01110
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01110
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM01110_This_enzyme_belongs_to_the_family_of_hydrolases,_specifically_those_acting_on_carboxylic_ester_bonds._The_systematic_name_of_this_enzyme_class_is_cutin_hydrolase._Aerial_plant_organs_are_protected_by_a_cuticle_composed_of_an_insoluble_polymeric_...

description:
  This enzyme belongs to the family of hydrolases, specifically those acting on carboxylic ester bonds. The systematic name of this enzyme class is cutin hydrolase. Aerial plant organs are protected by a cuticle composed of an insoluble polymeric ...


id: SM01116
description: Cyanate lyase C-terminal domain, Cyanate hydratase
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01116
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM01116_Cyanate_lyase_C-terminal_domain,_Cyanate_hydratase


id: SM01120
description: This domain is the predicted phosphatase domain of the dihydroxyacetone kinase family.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01120
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM01120_This_domain_is_the_predicted_phosphatase_domain_of_the_dihydroxyacetone_kinase_family.


id: SM01121
description: This is the kinase domain of the dihydroxyacetone kinase family.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01121
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM01121_This_is_the_kinase_domain_of_the_dihydroxyacetone_kinase_family.


id: SM01142
description: This C terminal domain is found in DOB1/SK12/helY-like DEAD box helicases [PUBMED:15112237].
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01142
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM01142_This_C_terminal_domain_is_found_in_DOB1/SK12/helY-like_DEAD_box_helicases_[PUBMED:15112237].


id: SM01150
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01150
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM01150_This_domain_is_found_in_a_variety_of_bacterial_and_fungal_hypothetical_proteins_of_unknown_function._The_structure_of_this_domain_has_been_solved_by_structural_genomics._The_structure_implies_a_zinc-binding_function,_so_it_is_a_putative_metal_...

description:
  This domain is found in a variety of bacterial and fungal hypothetical proteins of unknown function. The structure of this domain has been solved by structural genomics. The structure implies a zinc-binding function, so it is a putative metal ...


id: SM01208
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01208
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM01208_This_domain_is_found_in_a_wide_range_of_extracellular_proteins._It_is_found_tandemly_repeated_in_up_to_8_copies._It_is_found_in_the_N-terminus_of_peptidases_belonging_to_the_M26_family_which_cleave_human_IgA._The_domain_is_also_found_in_proteins_...

description:
  This domain is found in a wide range of extracellular proteins. It is found tandemly repeated in up to 8 copies. It is found in the N-terminus of peptidases belonging to the M26 family which cleave human IgA. The domain is also found in proteins ...


id: SM01209
description: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01209
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM01209_Phosphoribosylglycinamide_synthetase,_ATP-grasp_(A)_domain


id: SM01210
description: Phosphoribosylglycinamide synthetase, C domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01210
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM01210_Phosphoribosylglycinamide_synthetase,_C_domain


id: SM01211
description: CobB/CobQ-like glutamine amidotransferase domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01211
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM01211_CobB/CobQ-like_glutamine_amidotransferase_domain


id: SM01232
description: Formamidopyrimidine-DNA glycosylase H2TH domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01232
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM01232_Formamidopyrimidine-DNA_glycosylase_H2TH_domain


id: SM01234
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01234
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM01234_This_domain_has_haemolytic_activity_(PMID:19306042)._It_is_found_in_short_(73-103_amino_acid)_proteins_and_contains_three_conserved_cysteine_residues.

description:
  This domain has haemolytic activity (PMID:19306042). It is found in short (73-103 amino acid) proteins and contains three conserved cysteine residues.


id: SM01240
description: IMP dehydrogenase / GMP reductase domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01240
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM01240_IMP_dehydrogenase_/_GMP_reductase_domain


id: SM01329
description: Isocitrate/isopropylmalate dehydrogenase
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01329
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM01329_Isocitrate/isopropylmalate_dehydrogenase


id: SM01350
description: 6-phosphogluconate dehydrogenase, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01350
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM01350_6-phosphogluconate_dehydrogenase,_C-terminal_domain


id: SM01382
description: Ribosomal Proteins L2, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01382
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM01382_Ribosomal_Proteins_L2,_C-terminal_domain


id: SM01383
description: Ribosomal Proteins L2, RNA binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01383
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM01383_Ribosomal_Proteins_L2,_RNA_binding_domain


id: SM01390
description: Ribosomal protein S4/S9 N-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01390
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM01390_Ribosomal_protein_S4/S9_N-terminal_domain


id: SM01400
description: N-terminal domain of ribose phosphate pyrophosphokinase
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01400
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM01400_N-terminal_domain_of_ribose_phosphate_pyrophosphokinase


id: SM01477
description: DDE transposase retroviral integrase sub-family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01477
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM01477_DDE_transposase_retroviral_integrase_sub-family


id: SM01488
description: DDE transposase retroviral integrase sub-family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01488
name:
  Protein Domains (SMART).STRING_v12.0_43767_STRINGid_SM01488_DDE_transposase_retroviral_integrase_sub-family


