# geneInfo

ensembl_gene_id: SAMN04489760_101128
symbol: acsA
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: SAMN04489760_101130
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: SAMN04489760_101131
symbol: SEL95168.1
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: SAMN04489760_101137
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: SAMN04489760_101146
symbol: SEL95506.1
gene_biotype: protein_coding
description:
  Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: SAMN04489760_101148
symbol: dut
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: SAMN04489760_101149
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: SAMN04489760_101150
symbol: rpsO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: SAMN04489760_101151
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: SAMN04489760_101153
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: SAMN04489760_101155
symbol: infB
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: SAMN04489760_101157
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: SAMN04489760_101159
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: SAMN04489760_101160
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: SAMN04489760_101161
symbol: prmC
gene_biotype: protein_coding
description:
  Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: SAMN04489760_101162
symbol: prfA
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 1 (bRF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: SAMN04489760_101164
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: SAMN04489760_101166
symbol: SEL95869.1
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: SAMN04489760_101167
symbol: selA
gene_biotype: protein_coding
description:
  L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.


ensembl_gene_id: SAMN04489760_101169
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: SAMN04489760_101176
symbol: SEL96045.1
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN04489760_10118
symbol: SEL92900.1
gene_biotype: protein_coding
description:
  23S rRNA pseudouridine1911/1915/1917 synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: SAMN04489760_101180
symbol: bioD
gene_biotype: protein_coding
description:
  Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: SAMN04489760_101183
symbol: SEL96182.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: SAMN04489760_101187
symbol: bioA
gene_biotype: protein_coding
description:
  Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.


ensembl_gene_id: SAMN04489760_10126
symbol: SEL93057.1
gene_biotype: protein_coding
description:
  Nitrite/Sulfite reductase ferredoxin-like half domain-containing protein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: SAMN04489760_10127
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: SAMN04489760_10128
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: SAMN04489760_10129
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: SAMN04489760_10132
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.


ensembl_gene_id: SAMN04489760_10135
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase (homohexameric); Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily.


ensembl_gene_id: SAMN04489760_10136
symbol: hisI
gene_biotype: protein_coding
description:
  phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.


ensembl_gene_id: SAMN04489760_10142
symbol: bamD
gene_biotype: protein_coding
description:
  Beta-barrel assembly machine subunit BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: SAMN04489760_10175
symbol: SEL94132.1
gene_biotype: protein_coding
description:
  Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: SAMN04489760_10187
symbol: SEL94346.1
gene_biotype: protein_coding
description:
  3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).


ensembl_gene_id: SAMN04489760_10188
symbol: SEL94368.1
gene_biotype: protein_coding
description:
  Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN04489760_10192
symbol: SEL94443.1
gene_biotype: protein_coding
description:
  Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: SAMN04489760_10198
symbol: sbcD
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: SAMN04489760_102100
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: SAMN04489760_102101
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: SAMN04489760_102106
symbol: SEM00484.1
gene_biotype: protein_coding
description:
  1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.


ensembl_gene_id: SAMN04489760_102108
symbol: rimO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: SAMN04489760_10211
symbol: SEL98728.1
gene_biotype: protein_coding
description:
  Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family.


ensembl_gene_id: SAMN04489760_102116
symbol: msrB
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: SAMN04489760_102119
symbol: nnrD
gene_biotype: protein_coding
description:
  NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of bot [...]


ensembl_gene_id: SAMN04489760_102136
symbol: SEM01002.1
gene_biotype: protein_coding
description:
  Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: SAMN04489760_102142
symbol: SEM01089.1
gene_biotype: protein_coding
description:
  Na+/H+-dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: SAMN04489760_102156
symbol: SEM01335.1
gene_biotype: protein_coding
description:
  Formate dehydrogenase (quinone-dependent) catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN04489760_102162
symbol: SEM01438.1
gene_biotype: protein_coding
description:
  Kef-type potassium/proton antiporter, CPA2 family; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: SAMN04489760_102167
symbol: gpmA
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.


ensembl_gene_id: SAMN04489760_102169
symbol: SEM01558.1
gene_biotype: protein_coding
description:
  Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.


ensembl_gene_id: SAMN04489760_102179
symbol: kup
gene_biotype: protein_coding
description:
  KUP system potassium uptake protein; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family.


ensembl_gene_id: SAMN04489760_10219
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase subunit II; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to [...]


ensembl_gene_id: SAMN04489760_102190
symbol: SEM01915.1
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: SAMN04489760_102217
symbol: cas1
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Cas1 family; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: SAMN04489760_10229
symbol: SEL99056.1
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphatase; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).


ensembl_gene_id: SAMN04489760_10231
symbol: SEL99091.1
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: SAMN04489760_10232
symbol: recA
gene_biotype: protein_coding
description:
  RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: SAMN04489760_10234
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: SAMN04489760_1024
symbol: SEL98602.1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: SAMN04489760_10246
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: SAMN04489760_10248
symbol: rplM
gene_biotype: protein_coding
description:
  LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: SAMN04489760_10249
symbol: lptD
gene_biotype: protein_coding
description:
  LPS-assembly protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.


ensembl_gene_id: SAMN04489760_10250
symbol: SEL99477.1
gene_biotype: protein_coding
description:
  Dihydrofolate synthase / folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: SAMN04489760_10253
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN04489760_10254
symbol: rpsD
gene_biotype: protein_coding
description:
  SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: SAMN04489760_10255
symbol: rpsM
gene_biotype: protein_coding
description:
  SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: SAMN04489760_10256
symbol: infA
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 1 (bIF-1); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: SAMN04489760_10257
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: SAMN04489760_10258
symbol: secY
gene_biotype: protein_coding
description:
  Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: SAMN04489760_10259
symbol: rplO
gene_biotype: protein_coding
description:
  LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: SAMN04489760_10261
symbol: rpsE
gene_biotype: protein_coding
description:
  SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: SAMN04489760_10262
symbol: rplR
gene_biotype: protein_coding
description:
  LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: SAMN04489760_10263
symbol: rplF
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: SAMN04489760_10264
symbol: rpsH
gene_biotype: protein_coding
description:
  SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: SAMN04489760_10265
symbol: rplE
gene_biotype: protein_coding
description:
  LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: SAMN04489760_10266
symbol: rplX
gene_biotype: protein_coding
description:
  LSU ribosomal protein L24P; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: SAMN04489760_10267
symbol: rplN
gene_biotype: protein_coding
description:
  LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: SAMN04489760_10268
symbol: rpsQ
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: SAMN04489760_10270
symbol: rplP
gene_biotype: protein_coding
description:
  LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: SAMN04489760_10271
symbol: rpsC
gene_biotype: protein_coding
description:
  SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: SAMN04489760_10272
symbol: rplB
gene_biotype: protein_coding
description:
  LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: SAMN04489760_10273
symbol: rplW
gene_biotype: protein_coding
description:
  LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: SAMN04489760_10275
symbol: rplC
gene_biotype: protein_coding
description:
  LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: SAMN04489760_10276
symbol: rpsJ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: SAMN04489760_10277
symbol: tuf
gene_biotype: protein_coding
description:
  Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: SAMN04489760_10278
symbol: rpsG
gene_biotype: protein_coding
description:
  SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: SAMN04489760_10279
symbol: rpsL
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: SAMN04489760_10280
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN04489760_10282
symbol: rplL
gene_biotype: protein_coding
description:
  LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: SAMN04489760_10283
symbol: rplJ
gene_biotype: protein_coding
description:
  LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: SAMN04489760_10284
symbol: rplA
gene_biotype: protein_coding
description:
  LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: SAMN04489760_10285
symbol: rplK
gene_biotype: protein_coding
description:
  LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: SAMN04489760_10286
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: SAMN04489760_10287
symbol: secE
gene_biotype: protein_coding
description:
  Protein translocase subunit secE/sec61 gamma; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: SAMN04489760_10299
symbol: SEM00342.1
gene_biotype: protein_coding
description:
  23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN04489760_10313
symbol: prfC
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 3 (bRF-3); Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: SAMN04489760_103146
symbol: SEM06480.1
gene_biotype: protein_coding
description:
  Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN04489760_103147
symbol: SEM06502.1
gene_biotype: protein_coding
description:
  Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN04489760_103149
symbol: SEM06532.1
gene_biotype: protein_coding
description:
  16S rRNA (cytosine967-C5)-methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: SAMN04489760_103150
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: SAMN04489760_103152
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: SAMN04489760_103154
symbol: minC
gene_biotype: protein_coding
description:
  Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: SAMN04489760_10316
symbol: moaA
gene_biotype: protein_coding
description:
  Cyclic pyranopterin monophosphate synthase subunit MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: SAMN04489760_103163
symbol: SEM06784.1
gene_biotype: protein_coding
description:
  Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN04489760_103175
symbol: SEM06980.1
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: SAMN04489760_103178
symbol: SEM07033.1
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: SAMN04489760_103184
symbol: SEM07137.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: SAMN04489760_103190
symbol: SEM07237.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: SAMN04489760_10321
symbol: SEM04194.1
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: SAMN04489760_10328
symbol: SEM04290.1
gene_biotype: protein_coding
description:
  ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: SAMN04489760_10347
symbol: SEM04614.1
gene_biotype: protein_coding
description:
  Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: SAMN04489760_10371
symbol: SEM05037.1
gene_biotype: protein_coding
description:
  NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.


ensembl_gene_id: SAMN04489760_10380
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: SAMN04489760_10382
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: SAMN04489760_10389
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.


ensembl_gene_id: SAMN04489760_10390
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: SAMN04489760_10391
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: SAMN04489760_10399
symbol: SEM05574.1
gene_biotype: protein_coding
description:
  Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family.


ensembl_gene_id: SAMN04489760_10410
symbol: trmJ
gene_biotype: protein_coding
description:
  tRNA/rRNA methyltransferase; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.


ensembl_gene_id: SAMN04489760_104102
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: SAMN04489760_104130
symbol: SEM11554.1
gene_biotype: protein_coding
description:
  Thiol:disulfide interchange protein DsbC; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.


ensembl_gene_id: SAMN04489760_104131
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: SAMN04489760_104132
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: SAMN04489760_104135
symbol: ubiE
gene_biotype: protein_coding
description:
  Demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).


ensembl_gene_id: SAMN04489760_104142
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease-3; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: SAMN04489760_104144
symbol: SEM11769.1
gene_biotype: protein_coding
description:
  Protein translocase subunit secG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: SAMN04489760_104149
symbol: rnfB
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.


ensembl_gene_id: SAMN04489760_104153
symbol: rnfD
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: SAMN04489760_104154
symbol: rnfC
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.


ensembl_gene_id: SAMN04489760_104158
symbol: SEM11985.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.


ensembl_gene_id: SAMN04489760_104170
symbol: menA
gene_biotype: protein_coding
description:
  1,4-dihydroxy-2-naphthoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.


ensembl_gene_id: SAMN04489760_104171
symbol: SEM12205.1
gene_biotype: protein_coding
description:
  2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase; Catalyzes a proton abstraction reaction that results in 2,5- elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6- hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC).


ensembl_gene_id: SAMN04489760_104182
symbol: nhaA
gene_biotype: protein_coding
description:
  Sodium/proton antiporter, NhaA family; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.


ensembl_gene_id: SAMN04489760_1043
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN04489760_10436
symbol: SEM09688.1
gene_biotype: protein_coding
description:
  Stage II sporulation protein AA (anti-sigma F factor antagonist); Belongs to the anti-sigma-factor antagonist family.


ensembl_gene_id: SAMN04489760_10438
symbol: hldD
gene_biotype: protein_coding
description:
  ADP-glyceromanno-heptose 6-epimerase precursor; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily.


ensembl_gene_id: SAMN04489760_10439
symbol: kdsB
gene_biotype: protein_coding
description:
  3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase); Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: SAMN04489760_1044
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN04489760_1045
symbol: SEM09092.1
gene_biotype: protein_coding
description:
  DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]


ensembl_gene_id: SAMN04489760_1046
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: SAMN04489760_10476
symbol: atpD
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: SAMN04489760_10477
symbol: atpC
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: SAMN04489760_10480
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: SAMN04489760_10481
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN04489760_10482
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: SAMN04489760_10483
symbol: atpA
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: SAMN04489760_10487
symbol: kdpC
gene_biotype: protein_coding
description:
  K+-transporting ATPase ATPase C chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex.


ensembl_gene_id: SAMN04489760_10488
symbol: kdpB
gene_biotype: protein_coding
description:
  K+-transporting ATPase ATPase B chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily.


ensembl_gene_id: SAMN04489760_10489
symbol: kdpA
gene_biotype: protein_coding
description:
  K+-transporting ATPase ATPase A chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane.


ensembl_gene_id: SAMN04489760_1049
symbol: rsmG
gene_biotype: protein_coding
description:
  16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.


ensembl_gene_id: SAMN04489760_10510
symbol: SEM13679.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: SAMN04489760_105100
symbol: argD
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: SAMN04489760_105101
symbol: argB
gene_biotype: protein_coding
description:
  N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: SAMN04489760_105102
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent HslUV protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: SAMN04489760_105103
symbol: hslV
gene_biotype: protein_coding
description:
  ATP dependent peptidase CodWX, CodW component. Threonine peptidase. MEROPS family T01B; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: SAMN04489760_105104
symbol: xerC
gene_biotype: protein_coding
description:
  Integrase/recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: SAMN04489760_105106
symbol: miaB
gene_biotype: protein_coding
description:
  tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: SAMN04489760_105108
symbol: SEM15291.1
gene_biotype: protein_coding
description:
  Fumarate reductase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.


ensembl_gene_id: SAMN04489760_105117
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: SAMN04489760_105118
symbol: trmFO
gene_biotype: protein_coding
description:
  methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.


ensembl_gene_id: SAMN04489760_105124
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: SAMN04489760_105125
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: SAMN04489760_105126
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: SAMN04489760_105127
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: SAMN04489760_105128
symbol: aroD
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family.


ensembl_gene_id: SAMN04489760_105129
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: SAMN04489760_105131
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: SAMN04489760_105132
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: SAMN04489760_105137
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase, component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concent [...]


ensembl_gene_id: SAMN04489760_105138
symbol: dacA
gene_biotype: protein_coding
description:
  TIGR00159 family protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: SAMN04489760_105139
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium transporter; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: SAMN04489760_105149
symbol: mtaD
gene_biotype: protein_coding
description:
  5-methylthioadenosine/S-adenosylhomocysteine deaminase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family.


ensembl_gene_id: SAMN04489760_105159
symbol: trpB-2
gene_biotype: protein_coding
description:
  Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: SAMN04489760_105160
symbol: SEM16221.1
gene_biotype: protein_coding
description:
  Glycerol 3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN04489760_105164
symbol: surE
gene_biotype: protein_coding
description:
  5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: SAMN04489760_105166
symbol: grpE
gene_biotype: protein_coding
description:
  Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...]


ensembl_gene_id: SAMN04489760_105167
symbol: gmhA
gene_biotype: protein_coding
description:
  Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.


ensembl_gene_id: SAMN04489760_10545
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: SAMN04489760_10546
symbol: SEM14285.1
gene_biotype: protein_coding
description:
  Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.


ensembl_gene_id: SAMN04489760_10547
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP-dependent clade 'X' sub-subfamily.


ensembl_gene_id: SAMN04489760_10548
symbol: SEM14313.1
gene_biotype: protein_coding
description:
  Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.


ensembl_gene_id: SAMN04489760_10549
symbol: SEM14331.1
gene_biotype: protein_coding
description:
  Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: SAMN04489760_10555
symbol: recD
gene_biotype: protein_coding
description:
  DNA helicase/exodeoxyribonuclease V, alpha subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recomb [...]


ensembl_gene_id: SAMN04489760_10556
symbol: recB
gene_biotype: protein_coding
description:
  DNA helicase/exodeoxyribonuclease V, beta subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombi [...]


ensembl_gene_id: SAMN04489760_10557
symbol: recC
gene_biotype: protein_coding
description:
  DNA helicase/exodeoxyribonuclease V, gamma subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recomb [...]


ensembl_gene_id: SAMN04489760_10572
symbol: fusA
gene_biotype: protein_coding
description:
  Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...]


ensembl_gene_id: SAMN04489760_10578
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: SAMN04489760_10586
symbol: pepA
gene_biotype: protein_coding
description:
  Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: SAMN04489760_10589
symbol: SEM14975.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN04489760_10590
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: SAMN04489760_10593
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: SAMN04489760_10594
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: SAMN04489760_10595
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: SAMN04489760_10599
symbol: SEM15147.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: SAMN04489760_106115
symbol: SEM20000.1
gene_biotype: protein_coding
description:
  Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: SAMN04489760_106128
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: SAMN04489760_106130
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: SAMN04489760_106134
symbol: moaC
gene_biotype: protein_coding
description:
  Cyclic pyranopterin monophosphate synthase subunit MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: SAMN04489760_106137
symbol: SEM20376.1
gene_biotype: protein_coding
description:
  Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: SAMN04489760_10614
symbol: tatA
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: SAMN04489760_106153
symbol: nfi
gene_biotype: protein_coding
description:
  Endonuclease V; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA.


ensembl_gene_id: SAMN04489760_10618
symbol: lolD
gene_biotype: protein_coding
description:
  Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.


ensembl_gene_id: SAMN04489760_10619
symbol: bamA
gene_biotype: protein_coding
description:
  Beta-barrel assembly machine subunit BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: SAMN04489760_10621
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: SAMN04489760_10622
symbol: lpxA
gene_biotype: protein_coding
description:
  acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: SAMN04489760_10624
symbol: SEM18213.1
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: SAMN04489760_10625
symbol: msbA
gene_biotype: protein_coding
description:
  ATP-binding cassette, subfamily B, MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.


ensembl_gene_id: SAMN04489760_10626
symbol: lpxK
gene_biotype: protein_coding
description:
  lipid-A-disaccharide kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: SAMN04489760_10627
symbol: queC
gene_biotype: protein_coding
description:
  preQ(0) biosynthesis protein QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.


ensembl_gene_id: SAMN04489760_10628
symbol: queE
gene_biotype: protein_coding
description:
  7-carboxy-7-deazaguanine synthase; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: SAMN04489760_10641
symbol: SEM18527.1
gene_biotype: protein_coding
description:
  NAD(P)-dependent nickel-iron dehydrogenase catalytic subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.


ensembl_gene_id: SAMN04489760_10667
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: SAMN04489760_10668
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: SAMN04489760_10669
symbol: pyrR
gene_biotype: protein_coding
description:
  Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.


ensembl_gene_id: SAMN04489760_10674
symbol: secF
gene_biotype: protein_coding
description:
  Protein translocase subunit secF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: SAMN04489760_10675
symbol: secD
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: SAMN04489760_10676
symbol: yajC
gene_biotype: protein_coding
description:
  Protein translocase subunit yajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.


ensembl_gene_id: SAMN04489760_10677
symbol: tgt
gene_biotype: protein_coding
description:
  tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...]


ensembl_gene_id: SAMN04489760_10678
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine--tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: SAMN04489760_10711
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase trmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: SAMN04489760_107119
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: SAMN04489760_107120
symbol: SEM23857.1
gene_biotype: protein_coding
description:
  Isocitrate dehydrogenase (NADP); Belongs to the isocitrate and isopropylmalate dehydrogenases family.


ensembl_gene_id: SAMN04489760_107123
symbol: mtgA
gene_biotype: protein_coding
description:
  Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.


ensembl_gene_id: SAMN04489760_107124
symbol: SEM23909.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, CopG family; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family.


ensembl_gene_id: SAMN04489760_10713
symbol: yidC
gene_biotype: protein_coding
description:
  Protein translocase subunit yidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: SAMN04489760_10714
symbol: SEM22217.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: SAMN04489760_107142
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.


ensembl_gene_id: SAMN04489760_10715
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: SAMN04489760_10722
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: SAMN04489760_10734
symbol: SEM22505.1
gene_biotype: protein_coding
description:
  C-terminal processing peptidase-1. Serine peptidase. MEROPS family S41A; Belongs to the peptidase S41A family.


ensembl_gene_id: SAMN04489760_10757
symbol: SEM22852.1
gene_biotype: protein_coding
description:
  Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP). Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: SAMN04489760_10765
symbol: recD2
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V alpha subunit; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.


ensembl_gene_id: SAMN04489760_10778
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: SAMN04489760_10782
symbol: folD
gene_biotype: protein_coding
description:
  Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: SAMN04489760_10793
symbol: nadE
gene_biotype: protein_coding
description:
  NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: SAMN04489760_10810
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: SAMN04489760_108104
symbol: cheB
gene_biotype: protein_coding
description:
  Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: SAMN04489760_108105
symbol: cheD
gene_biotype: protein_coding
description:
  Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: SAMN04489760_10811
symbol: groS
gene_biotype: protein_coding
description:
  Chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: SAMN04489760_108110
symbol: SEM26679.1
gene_biotype: protein_coding
description:
  Chemotaxis protein methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.


ensembl_gene_id: SAMN04489760_108111
symbol: SEM26690.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains.


ensembl_gene_id: SAMN04489760_108117
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA/Sms; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: SAMN04489760_108118
symbol: SEM26794.1
gene_biotype: protein_coding
description:
  Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.


ensembl_gene_id: SAMN04489760_108119
symbol: SEM26819.1
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: SAMN04489760_108120
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: SAMN04489760_10816
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: SAMN04489760_10818
symbol: SEM25306.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter membrane protein 1, PhoT family; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: SAMN04489760_10864
symbol: SEM25846.1
gene_biotype: protein_coding
description:
  Outer membrane protein TolC; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.


ensembl_gene_id: SAMN04489760_10866
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: SAMN04489760_10867
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: SAMN04489760_10869
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: SAMN04489760_10871
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: SAMN04489760_10875
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: SAMN04489760_10880
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: SAMN04489760_10890
symbol: hpf
gene_biotype: protein_coding
description:
  Putative sigma-54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: SAMN04489760_10891
symbol: SEM26337.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN04489760_10897
symbol: xerD
gene_biotype: protein_coding
description:
  Integrase/recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: SAMN04489760_10921
symbol: mrdB
gene_biotype: protein_coding
description:
  Cell elongation-specific peptidoglycan biosynthesis regulator RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: SAMN04489760_10923
symbol: atpF-2
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: SAMN04489760_10925
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN04489760_10926
symbol: atpA-2
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: SAMN04489760_10927
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: SAMN04489760_10928
symbol: atpD-2
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: SAMN04489760_10929
symbol: atpC-2
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: SAMN04489760_10930
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: SAMN04489760_10939
symbol: SEM28352.1
gene_biotype: protein_coding
description:
  tRNA nucleotidyltransferase (CCA-adding enzyme); Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: SAMN04489760_10942
symbol: rsmI
gene_biotype: protein_coding
description:
  16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: SAMN04489760_10948
symbol: infC
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: SAMN04489760_10950
symbol: rplT
gene_biotype: protein_coding
description:
  LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: SAMN04489760_10951
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: SAMN04489760_10952
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: SAMN04489760_10953
symbol: SEM28606.1
gene_biotype: protein_coding
description:
  Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: SAMN04489760_10958
symbol: SEM28714.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate--protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: SAMN04489760_10960
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: SAMN04489760_10961
symbol: SEM28770.1
gene_biotype: protein_coding
description:
  Putative holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: SAMN04489760_10962
symbol: mltG
gene_biotype: protein_coding
description:
  UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.


ensembl_gene_id: SAMN04489760_10964
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA (cytosine1402-N4)-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: SAMN04489760_10967
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: SAMN04489760_10968
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: SAMN04489760_10969
symbol: mraY
gene_biotype: protein_coding
description:
  Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: SAMN04489760_10970
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: SAMN04489760_10972
symbol: murG
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: SAMN04489760_10976
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: SAMN04489760_10977
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: SAMN04489760_11010
symbol: SEM30982.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: SAMN04489760_11022
symbol: queF
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.


ensembl_gene_id: SAMN04489760_11024
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: SAMN04489760_11029
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: SAMN04489760_11030
symbol: ftsH
gene_biotype: protein_coding
description:
  Membrane protease FtsH catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: SAMN04489760_11032
symbol: acpS
gene_biotype: protein_coding
description:
  Holo-[acyl-carrier protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: SAMN04489760_11039
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: SAMN04489760_11040
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: SAMN04489760_11041
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: SAMN04489760_11042
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent proteinase. Serine peptidase. MEROPS family S16; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: SAMN04489760_11046
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: SAMN04489760_11047
symbol: prfB
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 2 (bRF-2); Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: SAMN04489760_11049
symbol: ybeY
gene_biotype: protein_coding
description:
  Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: SAMN04489760_11057
symbol: SEM31825.1
gene_biotype: protein_coding
description:
  Phosphopantothenate-cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: SAMN04489760_11062
symbol: SEM31929.1
gene_biotype: protein_coding
description:
  Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like/2,3-diketo-5-methylthio-1-phosphopentane phosphatase.


ensembl_gene_id: SAMN04489760_11065
symbol: SEM31986.1
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen-3 oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: SAMN04489760_11066
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: SAMN04489760_11067
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: SAMN04489760_11073
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: SAMN04489760_11085
symbol: SEM32380.1
gene_biotype: protein_coding
description:
  Pyrophosphate-dependent phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family.


ensembl_gene_id: SAMN04489760_11087
symbol: purN
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: SAMN04489760_11096
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: SAMN04489760_11098
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: SAMN04489760_11110
symbol: panC
gene_biotype: protein_coding
description:
  Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: SAMN04489760_11111
symbol: panD
gene_biotype: protein_coding
description:
  L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: SAMN04489760_11114
symbol: ahcY
gene_biotype: protein_coding
description:
  Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: SAMN04489760_11122
symbol: SEM34314.1
gene_biotype: protein_coding
description:
  SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.


ensembl_gene_id: SAMN04489760_1113
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II Aspartic peptidase. MEROPS family A08; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: SAMN04489760_11130
symbol: priA
gene_biotype: protein_coding
description:
  Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: SAMN04489760_11131
symbol: dksA
gene_biotype: protein_coding
description:
  Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.


ensembl_gene_id: SAMN04489760_11132
symbol: SEM34555.1
gene_biotype: protein_coding
description:
  rfaE bifunctional protein, domain II; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose.


ensembl_gene_id: SAMN04489760_11134
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: SAMN04489760_1114
symbol: ileS
gene_biotype: protein_coding
description:
  Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: SAMN04489760_11143
symbol: thiC
gene_biotype: protein_coding
description:
  Hydroxymethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.


ensembl_gene_id: SAMN04489760_11145
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: SAMN04489760_11153
symbol: nadK
gene_biotype: protein_coding
description:
  NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: SAMN04489760_11157
symbol: SEM34984.1
gene_biotype: protein_coding
description:
  DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: SAMN04489760_11159
symbol: SEM35014.1
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: SAMN04489760_1116
symbol: tsaD
gene_biotype: protein_coding
description:
  O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: SAMN04489760_11168
symbol: pyrK
gene_biotype: protein_coding
description:
  Dihydroorotate oxidase B, electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).


ensembl_gene_id: SAMN04489760_11174
symbol: SEM35283.1
gene_biotype: protein_coding
description:
  Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: SAMN04489760_11178
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: SAMN04489760_11179
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: SAMN04489760_1118
symbol: rsmA
gene_biotype: protein_coding
description:
  Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: SAMN04489760_11180
symbol: SEM35384.1
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: SAMN04489760_11181
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: SAMN04489760_11182
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: SAMN04489760_11186
symbol: SEM35495.1
gene_biotype: protein_coding
description:
  Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: SAMN04489760_11194
symbol: SEM35631.1
gene_biotype: protein_coding
description:
  Flagella basal body P-ring formation protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.


ensembl_gene_id: SAMN04489760_11195
symbol: flgH
gene_biotype: protein_coding
description:
  Flagellar L-ring protein precursor FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: SAMN04489760_11196
symbol: flgI
gene_biotype: protein_coding
description:
  Flagellar P-ring protein precursor FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: SAMN04489760_11224
symbol: metXA
gene_biotype: protein_coding
description:
  Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.


ensembl_gene_id: SAMN04489760_11226
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: SAMN04489760_11228
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: SAMN04489760_11237
symbol: iscS
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.


ensembl_gene_id: SAMN04489760_11238
symbol: fdhD
gene_biotype: protein_coding
description:
  FdhD protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.


ensembl_gene_id: SAMN04489760_11239
symbol: SEM37326.1
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins.


ensembl_gene_id: SAMN04489760_11249
symbol: rlpA
gene_biotype: protein_coding
description:
  Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: SAMN04489760_11261
symbol: proA
gene_biotype: protein_coding
description:
  Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: SAMN04489760_11262
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: SAMN04489760_11270
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: SAMN04489760_11271
symbol: murJ
gene_biotype: protein_coding
description:
  Putative peptidoglycan lipid II flippase; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: SAMN04489760_11274
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: SAMN04489760_11276
symbol: SEM37925.1
gene_biotype: protein_coding
description:
  tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family; Belongs to the SUA5 family.


ensembl_gene_id: SAMN04489760_11316
symbol: birA
gene_biotype: protein_coding
description:
  Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.


ensembl_gene_id: SAMN04489760_11317
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: SAMN04489760_11350
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: SAMN04489760_11358
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: SAMN04489760_11369
symbol: gcvPA
gene_biotype: protein_coding
description:
  Glycine dehydrogenase (decarboxylating) alpha subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.


ensembl_gene_id: SAMN04489760_11371
symbol: lipB
gene_biotype: protein_coding
description:
  Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: SAMN04489760_11372
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: SAMN04489760_11415
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: SAMN04489760_11421
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA-adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN04489760_11425
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III, tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: SAMN04489760_11426
symbol: SEM40970.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: SAMN04489760_11427
symbol: recR
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: SAMN04489760_11444
symbol: tatC
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: SAMN04489760_11447
symbol: gatC
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: SAMN04489760_11448
symbol: gatA
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: SAMN04489760_11449
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: SAMN04489760_11450
symbol: mtnA
gene_biotype: protein_coding
description:
  Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: SAMN04489760_11478
symbol: zupT
gene_biotype: protein_coding
description:
  Zinc transporter, ZIP family; Mediates zinc uptake. May also transport other divalent cations; Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily.


ensembl_gene_id: SAMN04489760_11512
symbol: gmd
gene_biotype: protein_coding
description:
  GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.


ensembl_gene_id: SAMN04489760_11513
symbol: fcl
gene_biotype: protein_coding
description:
  GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.


ensembl_gene_id: SAMN04489760_11514
symbol: SEM42771.1
gene_biotype: protein_coding
description:
  Mannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family.


ensembl_gene_id: SAMN04489760_11521
symbol: lon-2
gene_biotype: protein_coding
description:
  ATP-dependent Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: SAMN04489760_11525
symbol: SEM42951.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN04489760_11526
symbol: SEM42973.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN04489760_11528
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: SAMN04489760_11533
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: SAMN04489760_11536
symbol: rnc
gene_biotype: protein_coding
description:
  RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: SAMN04489760_11543
symbol: SEM43280.1
gene_biotype: protein_coding
description:
  Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family; Belongs to the LDH2/MDH2 oxidoreductase family.


ensembl_gene_id: SAMN04489760_11547
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole-phosphate synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: SAMN04489760_11555
symbol: SEM43452.1
gene_biotype: protein_coding
description:
  acetylornithine/N-succinyldiaminopimelate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN04489760_11559
symbol: SEM43512.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: SAMN04489760_11560
symbol: SEM43527.1
gene_biotype: protein_coding
description:
  Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: SAMN04489760_11573
symbol: SEM43743.1
gene_biotype: protein_coding
description:
  23S rRNA (uracil1939-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: SAMN04489760_11620
symbol: SEM44817.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase-1; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: SAMN04489760_11624
symbol: acpP
gene_biotype: protein_coding
description:
  Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.


ensembl_gene_id: SAMN04489760_11634
symbol: plsY
gene_biotype: protein_coding
description:
  Acyl-phosphate glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: SAMN04489760_11635
symbol: SEM45132.1
gene_biotype: protein_coding
description:
  NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.


ensembl_gene_id: SAMN04489760_11636
symbol: SEM45150.1
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine.


ensembl_gene_id: SAMN04489760_11642
symbol: SEM45277.1
gene_biotype: protein_coding
description:
  Hydrogenase maturation protein, carbamoyltransferase HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide.


ensembl_gene_id: SAMN04489760_11646
symbol: hypA
gene_biotype: protein_coding
description:
  Hydrogenase-3 nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.


ensembl_gene_id: SAMN04489760_11649
symbol: SEM45399.1
gene_biotype: protein_coding
description:
  [NiFe]-hydrogenase I apoprotein, large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.


ensembl_gene_id: SAMN04489760_11654
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: SAMN04489760_11664
symbol: hppA
gene_biotype: protein_coding
description:
  K(+)-stimulated pyrophosphate-energized sodium pump; Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force.


ensembl_gene_id: SAMN04489760_11665
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: SAMN04489760_11666
symbol: rplY
gene_biotype: protein_coding
description:
  LSU ribosomal protein L25P; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: SAMN04489760_11667
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: SAMN04489760_11669
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: SAMN04489760_11672
symbol: clpB
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: SAMN04489760_11673
symbol: SEM45862.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 32 subunit, RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN04489760_11674
symbol: SEM45872.1
gene_biotype: protein_coding
description:
  Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: SAMN04489760_11677
symbol: rpsR
gene_biotype: protein_coding
description:
  SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: SAMN04489760_1168
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: SAMN04489760_11682
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Cas2 family; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: SAMN04489760_11710
symbol: tolB
gene_biotype: protein_coding
description:
  TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: SAMN04489760_11711
symbol: pal
gene_biotype: protein_coding
description:
  Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: SAMN04489760_11712
symbol: cpoB
gene_biotype: protein_coding
description:
  Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.


ensembl_gene_id: SAMN04489760_11722
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: SAMN04489760_11724
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN04489760_11726
symbol: SEM47371.1
gene_biotype: protein_coding
description:
  Molybdopterin molybdochelatase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN04489760_11730
symbol: SEM47428.1
gene_biotype: protein_coding
description:
  Transposase (or an inactivated derivative); Required for the transposition of the insertion element.


ensembl_gene_id: SAMN04489760_11740
symbol: SEM47657.1
gene_biotype: protein_coding
description:
  cob(I)yrinic acid a,c-diamide adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.


ensembl_gene_id: SAMN04489760_1175
symbol: efp
gene_biotype: protein_coding
description:
  Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: SAMN04489760_11753
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the i [...]


ensembl_gene_id: SAMN04489760_11755
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: SAMN04489760_11756
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (Guanine37-N(1)-) methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: SAMN04489760_11758
symbol: rplS
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: SAMN04489760_11823
symbol: nifH
gene_biotype: protein_coding
description:
  Mo-nitrogenase iron protein subunit NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.


ensembl_gene_id: SAMN04489760_11824
symbol: ppnP
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.


ensembl_gene_id: SAMN04489760_11866
symbol: SEM50285.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein, PhoT family; Belongs to the ABC transporter superfamily.


ensembl_gene_id: SAMN04489760_11946
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: SAMN04489760_11947
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: SAMN04489760_11955
symbol: SEM51863.1
gene_biotype: protein_coding
description:
  Type II secretion system protein E (GspE); Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.


ensembl_gene_id: SAMN04489760_1198
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: SAMN04489760_12020
symbol: SEM53015.1
gene_biotype: protein_coding
description:
  Type 4 prepilin peptidase 1 Aspartic peptidase. MEROPS family A24A; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.


ensembl_gene_id: SAMN04489760_12021
symbol: SEM53041.1
gene_biotype: protein_coding
description:
  Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: SAMN04489760_12036
symbol: engB
gene_biotype: protein_coding
description:
  GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: SAMN04489760_12047
symbol: mobA
gene_biotype: protein_coding
description:
  Molybdenum cofactor guanylyltransferase; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.


ensembl_gene_id: SAMN04489760_12057
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: SAMN04489760_12141
symbol: fbp-2
gene_biotype: protein_coding
description:
  Fructose 1,6-bisphosphate aldolase/phosphatase; Catalyzes two subsequent steps in gluconeogenesis: the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3- phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P).


ensembl_gene_id: SAMN04489760_12223
symbol: coaX
gene_biotype: protein_coding
description:
  Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: SAMN04489760_12224
symbol: SEM56033.1
gene_biotype: protein_coding
description:
  BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase.


ensembl_gene_id: SAMN04489760_12226
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: SAMN04489760_12228
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: SAMN04489760_12229
symbol: panB
gene_biotype: protein_coding
description:
  Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: SAMN04489760_12240
symbol: SEM56316.1
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: SAMN04489760_12244
symbol: rplU
gene_biotype: protein_coding
description:
  LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: SAMN04489760_12246
symbol: obg
gene_biotype: protein_coding
description:
  GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: SAMN04489760_12247
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: SAMN04489760_12313
symbol: SEM57116.1
gene_biotype: protein_coding
description:
  Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: SAMN04489760_12314
symbol: SEM57139.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN04489760_12318
symbol: SEM57201.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: SAMN04489760_12324
symbol: hisC-2
gene_biotype: protein_coding
description:
  Histidinol phosphate aminotransferase apoenzyme; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: SAMN04489760_12337
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: SAMN04489760_12338
symbol: ruvC
gene_biotype: protein_coding
description:
  Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: SAMN04489760_12414
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: SAMN04489760_12415
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: SAMN04489760_12416
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: SAMN04489760_12418
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: SAMN04489760_12419
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: SAMN04489760_12420
symbol: nuoI
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: SAMN04489760_12421
symbol: SEM58373.1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: SAMN04489760_12422
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: SAMN04489760_12425
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: SAMN04489760_12430
symbol: mscL
gene_biotype: protein_coding
description:
  Large conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: SAMN04489760_12513
symbol: fur
gene_biotype: protein_coding
description:
  Fur family transcriptional regulator, peroxide stress response regulator; Belongs to the Fur family.


ensembl_gene_id: SAMN04489760_12612
symbol: secA
gene_biotype: protein_coding
description:
  Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: SAMN04489760_12613
symbol: argJ
gene_biotype: protein_coding
description:
  Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: SAMN04489760_12617
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts (EF-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: SAMN04489760_12619
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: SAMN04489760_12620
symbol: SEM60840.1
gene_biotype: protein_coding
description:
  Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: SAMN04489760_12622
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: SAMN04489760_12625
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: SAMN04489760_12626
symbol: SEM60971.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN04489760_12627
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: SAMN04489760_12629
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: SAMN04489760_12631
symbol: SEM61062.1
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: SAMN04489760_12632
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: SAMN04489760_12633
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]


ensembl_gene_id: SAMN04489760_12634
symbol: SEM61127.1
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: SAMN04489760_12636
symbol: rph
gene_biotype: protein_coding
description:
  RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: SAMN04489760_12637
symbol: SEM61176.1
gene_biotype: protein_coding
description:
  XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: SAMN04489760_1266
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: SAMN04489760_12713
symbol: SEM61715.1
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: SAMN04489760_12721
symbol: pdxT
gene_biotype: protein_coding
description:
  5'-phosphate synthase pdxT subunit; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.


ensembl_gene_id: SAMN04489760_12722
symbol: pdxS
gene_biotype: protein_coding
description:
  Pyridoxal phosphate synthase yaaD subunit; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.


ensembl_gene_id: SAMN04489760_12723
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit hisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: SAMN04489760_12724
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit hisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: SAMN04489760_12727
symbol: aat
gene_biotype: protein_coding
description:
  leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: SAMN04489760_12729
symbol: clpS
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: SAMN04489760_12733
symbol: nusB
gene_biotype: protein_coding
description:
  NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: SAMN04489760_12734
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: SAMN04489760_12735
symbol: ribBA
gene_biotype: protein_coding
description:
  GTP cyclohydrolase II /3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: SAMN04489760_12737
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: SAMN04489760_12739
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: SAMN04489760_12741
symbol: SEM62204.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: SAMN04489760_12745
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).


ensembl_gene_id: SAMN04489760_12848
symbol: SEM63565.1
gene_biotype: protein_coding
description:
  Thymidylate synthase, flavin-dependent; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: SAMN04489760_12919
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: SAMN04489760_12926
symbol: metE
gene_biotype: protein_coding
description:
  Methionine synthase (B12-independent); Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.


ensembl_gene_id: SAMN04489760_1298
symbol: menB
gene_biotype: protein_coding
description:
  1,4-Dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.


ensembl_gene_id: SAMN04489760_1299
symbol: menD
gene_biotype: protein_coding
description:
  2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily.


ensembl_gene_id: SAMN04489760_13132
symbol: pcnB
gene_biotype: protein_coding
description:
  poly(A) polymerase; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: SAMN04489760_1315
symbol: SEM65835.1
gene_biotype: protein_coding
description:
  RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN04489760_13215
symbol: pcm
gene_biotype: protein_coding
description:
  protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.


ensembl_gene_id: SAMN04489760_13326
symbol: SEM67594.1
gene_biotype: protein_coding
description:
  Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: SAMN04489760_13327
symbol: SEM67610.1
gene_biotype: protein_coding
description:
  Molybdate transport system ATP-binding protein; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family.


ensembl_gene_id: SAMN04489760_1337
symbol: SEM67215.1
gene_biotype: protein_coding
description:
  Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.


ensembl_gene_id: SAMN04489760_13412
symbol: SEM68293.1
gene_biotype: protein_coding
description:
  methylmalonyl-CoA mutase C-terminal domain-containing protein/methyltransferase cognate corrinoid proteins.


ensembl_gene_id: SAMN04489760_13414
symbol: SEM68335.1
gene_biotype: protein_coding
description:
  [methyl-Co(III) methanol-specific corrinoid protein]:coenzyme M methyltransferase; Belongs to the uroporphyrinogen decarboxylase family.


ensembl_gene_id: SAMN04489760_13512
symbol: ftsH-3
gene_biotype: protein_coding
description:
  Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: SAMN04489760_13513
symbol: SEM69330.1
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase A (cyclophilin A); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: SAMN04489760_13622
symbol: hemC
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.


ensembl_gene_id: SAMN04489760_13623
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: SAMN04489760_13626
symbol: prmA
gene_biotype: protein_coding
description:
  [LSU ribosomal protein L11P]-lysine N-methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: SAMN04489760_13627
symbol: SEM70512.1
gene_biotype: protein_coding
description:
  16S rRNA (uracil1498-N3)-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: SAMN04489760_1365
symbol: SEM70082.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.


ensembl_gene_id: SAMN04489760_1366
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: SAMN04489760_1375
symbol: SEM70908.1
gene_biotype: protein_coding
description:
  ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); Belongs to the helicase family. UvrD subfamily.


ensembl_gene_id: SAMN04489760_1382
symbol: SEM71424.1
gene_biotype: protein_coding
description:
  Thiol peroxidase (atypical 2-Cys peroxiredoxin); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.


ensembl_gene_id: SAMN04489760_13910
symbol: SEM72508.1
gene_biotype: protein_coding
description:
  Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: SAMN04489760_13914
symbol: purE
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: SAMN04489760_13918
symbol: gltX-2
gene_biotype: protein_coding
description:
  Nondiscriminating glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: SAMN04489760_13919
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: SAMN04489760_13920
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: SAMN04489760_1394
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: SAMN04489760_1398
symbol: SEM72473.1
gene_biotype: protein_coding
description:
  Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: SAMN04489760_1413
symbol: SEM74194.1
gene_biotype: protein_coding
description:
  Molybdopterin molybdotransferase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN04489760_14411
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: SAMN04489760_1466
symbol: queH
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).


ensembl_gene_id: SAMN04489760_1467
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: SAMN04489760_14912
symbol: SEM79904.1
gene_biotype: protein_coding
description:
  Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.


ensembl_gene_id: SAMN04489760_1537
symbol: lgt
gene_biotype: protein_coding
description:
  Phosphatidylglycerol:prolipoprotein diacylglycerol transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


# pathwayInfo

id: CL:1022
description: Pantothenate biosynthesis, and Biotin-protein ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1022_Pantothenate_biosynthesis,_and_Biotin-protein_ligase_activity


id: CL:1040
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1040_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor,_and_Pyrimidine_nucleoside_triphosphate_metabolic_process

description:
  Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor, and Pyrimidine nucleoside triphosphate metabolic process


id: CL:1042
description: Mixed, incl. Cobalamin, and Deoxyribonucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1042_Mixed,_incl._Cobalamin,_and_Deoxyribonucleotide_biosynthetic_process


id: CL:1065
description: Cellular amino acid biosynthetic process, and One-carbon metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1065_Cellular_amino_acid_biosynthetic_process,_and_One-carbon_metabolic_process


id: CL:1067
description: Alpha-amino acid biosynthetic process, and One-carbon metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1067_Alpha-amino_acid_biosynthetic_process,_and_One-carbon_metabolic_process


id: CL:1069
description: Lysine biosynthetic process, and Arginine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1069_Lysine_biosynthetic_process,_and_Arginine_biosynthetic_process


id: CL:1070
description: Lysine biosynthetic process, and Threonine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1070_Lysine_biosynthetic_process,_and_Threonine_metabolic_process


id: CL:1072
description: Lysine biosynthesis, and Amino acid kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1072_Lysine_biosynthesis,_and_Amino_acid_kinase_activity


id: CL:1113
description: Sulfur amino acid biosynthetic process, and One-carbon metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1113_Sulfur_amino_acid_biosynthetic_process,_and_One-carbon_metabolic_process


id: CL:1114
description: Cysteine biosynthetic process from serine, and Cysteine-tRNA ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1114_Cysteine_biosynthetic_process_from_serine,_and_Cysteine-tRNA_ligase


id: CL:1116
description: Cysteine biosynthetic process from serine, and Transsulfuration
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1116_Cysteine_biosynthetic_process_from_serine,_and_Transsulfuration


id: CL:1135
description: S-methyltransferase activity, and One-carbon metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1135_S-methyltransferase_activity,_and_One-carbon_metabolic_process


id: CL:1157
description: Phenylalanine, tyrosine and tryptophan biosynthesis, and Histidine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1157_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis,_and_Histidine_biosynthesis


id: CL:1158
description: Phenylalanine, tyrosine and tryptophan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1158_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis


id: CL:1216
description: Mixed, incl. Glycolytic process, and Import into cell
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1216_Mixed,_incl._Glycolytic_process,_and_Import_into_cell


id: CL:1218
description: Glycolytic process, and Pentose phosphate pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1218_Glycolytic_process,_and_Pentose_phosphate_pathway


id: CL:1220
description: Glycolytic process, and Pentose phosphate pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1220_Glycolytic_process,_and_Pentose_phosphate_pathway


id: CL:1223
description: Glycolysis, and NADPH regeneration
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1223_Glycolysis,_and_NADPH_regeneration


id: CL:1224
description: Glycolysis, and NADPH regeneration
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1224_Glycolysis,_and_NADPH_regeneration


id: CL:1226
description: Glycolysis, and Fructose-bisphosphate aldolase class-II
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1226_Glycolysis,_and_Fructose-bisphosphate_aldolase_class-II


id: CL:1244
description: Sugar-phosphatase activity, and Phosphofructokinase
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1244_Sugar-phosphatase_activity,_and_Phosphofructokinase


id: CL:1258
description: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, and L-serine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1258_2,3-bisphosphoglycerate-independent_phosphoglycerate_mutase,_and_L-serine_biosynthetic_process


id: CL:127
description: Mixed, incl. Translation, and RNA processing
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:127_Mixed,_incl._Translation,_and_RNA_processing


id: CL:1274
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1274_Phosphoglycolate_phosphatase_activity,_and_D-isomer_specific_2-hydroxyacid_dehydrogenase,_catalytic_domain

description:
  Phosphoglycolate phosphatase activity, and D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain


id: CL:128
description: Mixed, incl. Translation, and Protein export
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:128_Mixed,_incl._Translation,_and_Protein_export


id: CL:129
description: Translation, and Proton-transporting ATP synthase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:129_Translation,_and_Proton-transporting_ATP_synthase_complex


id: CL:1290
description: Import into cell, and Ribosomal small subunit binding
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1290_Import_into_cell,_and_Ribosomal_small_subunit_binding


id: CL:131
description: Translation, and Proton-transporting ATP synthase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:131_Translation,_and_Proton-transporting_ATP_synthase_complex


id: CL:1312
description: Mixed, incl. FAD dependent protein, and Ribosome hibernation promotion factor-like
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1312_Mixed,_incl._FAD_dependent_protein,_and_Ribosome_hibernation_promotion_factor-like


id: CL:132
description: Translation, and Proton-transporting ATP synthase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:132_Translation,_and_Proton-transporting_ATP_synthase_complex


id: CL:133
description: Translation, and Proton-transporting ATP synthase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:133_Translation,_and_Proton-transporting_ATP_synthase_complex


id: CL:1330
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and tRNA modification
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1330_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_tRNA_modification


id: CL:1332
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and ELP3/YhcC
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1332_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_ELP3/YhcC


id: CL:1335
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1335_tRNA_threonylcarbamoyladenosine_modification,_and_rRNA_(adenine-N6,N6-)-dimethyltransferase_activity

description:
  tRNA threonylcarbamoyladenosine modification, and rRNA (adenine-N6,N6-)-dimethyltransferase activity


id: CL:135
description: Translation, and Proton-transporting ATP synthase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:135_Translation,_and_Proton-transporting_ATP_synthase_complex


id: CL:1358
description: Mixed, incl. Dihydrouridine synthase (Dus), and Septation
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1358_Mixed,_incl._Dihydrouridine_synthase_(Dus),_and_Septation


id: CL:136
description: Ribosome, and Proton-transporting ATP synthase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:136_Ribosome,_and_Proton-transporting_ATP_synthase_complex


id: CL:1367
description: Mixed, incl. Pyridine nucleotide metabolic process, and Arginine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1367_Mixed,_incl._Pyridine_nucleotide_metabolic_process,_and_Arginine_catabolic_process


id: CL:1368
description: Pyridine nucleotide metabolic process, and Deacetylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1368_Pyridine_nucleotide_metabolic_process,_and_Deacetylase_activity


id: CL:137
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:137_Ribosome,_and_Regulation_of_translation


id: CL:1370
description: Nicotinamide nucleotide metabolic process, and Sir2 family
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1370_Nicotinamide_nucleotide_metabolic_process,_and_Sir2_family


id: CL:1371
description: Pyridine nucleotide metabolic process, and Sir2 family
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1371_Pyridine_nucleotide_metabolic_process,_and_Sir2_family


id: CL:1374
description: Sir2 family, and Pyridine nucleotide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1374_Sir2_family,_and_Pyridine_nucleotide_metabolic_process


id: CL:140
description: Structural constituent of ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:140_Structural_constituent_of_ribosome,_and_Regulation_of_translation


id: CL:1419
description: Arginine catabolic process, and Carbon-nitrogen hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1419_Arginine_catabolic_process,_and_Carbon-nitrogen_hydrolase


id: CL:1428
description: Mixed, incl. Metalloendopeptidase activity, and Band 7 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1428_Mixed,_incl._Metalloendopeptidase_activity,_and_Band_7_domain


id: CL:143
description: Structural constituent of ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:143_Structural_constituent_of_ribosome,_and_Translation_regulator_activity


id: CL:1430
description: Mixed, incl. Band 7 domain, and S-adenosylmethionine cycle
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1430_Mixed,_incl._Band_7_domain,_and_S-adenosylmethionine_cycle


id: CL:144
description: Structural constituent of ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:144_Structural_constituent_of_ribosome,_and_Translation_regulator_activity


id: CL:1451
description: Mixed, incl. HIT-like domain, and Calcineurin-like phosphoesterase superfamily domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1451_Mixed,_incl._HIT-like_domain,_and_Calcineurin-like_phosphoesterase_superfamily_domain


id: CL:1452
description: Mixed, incl. HIT domain, and Nucleotidyltransferase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1452_Mixed,_incl._HIT_domain,_and_Nucleotidyltransferase_superfamily


id: CL:1454
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1454_Mixed,_incl._RNA_adenylyltransferase_activity,_and_Calcineurin-like_phosphoesterase_superfamily_domain

description:
  Mixed, incl. RNA adenylyltransferase activity, and Calcineurin-like phosphoesterase superfamily domain


id: CL:147
description: Structural constituent of ribosome, and Translational elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:147_Structural_constituent_of_ribosome,_and_Translational_elongation


id: CL:1475
description: Mixed, incl. Acylphosphatase, and DisA/LigA, helix-hairpin-helix motif
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1475_Mixed,_incl._Acylphosphatase,_and_DisA/LigA,_helix-hairpin-helix_motif


id: CL:1488
description: Mixed, incl. Peptidoglycan metabolic process, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1488_Mixed,_incl._Peptidoglycan_metabolic_process,_and_Lipopolysaccharide_biosynthesis


id: CL:1489
description: Mixed, incl. Lipopolysaccharide biosynthesis, and Membrane organization
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1489_Mixed,_incl._Lipopolysaccharide_biosynthesis,_and_Membrane_organization


id: CL:1490
description: Mixed, incl. Membrane organization, and TonB/TolA, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1490_Mixed,_incl._Membrane_organization,_and_TonB/TolA,_C-terminal


id: CL:1492
description: Mixed, incl. Membrane organization, and TonB/TolA, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1492_Mixed,_incl._Membrane_organization,_and_TonB/TolA,_C-terminal


id: CL:1494
description: Mixed, incl. TonB/TolA, C-terminal, and Biopolymer transport protein ExbD/TolR
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1494_Mixed,_incl._TonB/TolA,_C-terminal,_and_Biopolymer_transport_protein_ExbD/TolR


id: CL:1495
description: TonB, C-terminal, and Vitamin transport
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1495_TonB,_C-terminal,_and_Vitamin_transport


id: CL:1506
description: Mixed, incl. Periplasm, and Biopolymer transport protein ExbD/TolR
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1506_Mixed,_incl._Periplasm,_and_Biopolymer_transport_protein_ExbD/TolR


id: CL:151
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:151_Structural_constituent_of_ribosome


id: CL:1522
description: Membrane assembly, and Lipoprotein localization
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1522_Membrane_assembly,_and_Lipoprotein_localization


id: CL:1523
description: Protein insertion into membrane, and Lipoprotein localization
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1523_Protein_insertion_into_membrane,_and_Lipoprotein_localization


id: CL:1538
description: Lipopolysaccharide transport, and Lipopolysaccharide binding
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1538_Lipopolysaccharide_transport,_and_Lipopolysaccharide_binding


id: CL:1550
description: Mixed, incl. dUMP metabolic process, and Protein domain specific binding
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1550_Mixed,_incl._dUMP_metabolic_process,_and_Protein_domain_specific_binding


id: CL:1552
description: Mixed, incl. dUMP metabolic process, and Protein domain specific binding
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1552_Mixed,_incl._dUMP_metabolic_process,_and_Protein_domain_specific_binding


id: CL:1569
description: Lipopolysaccharide biosynthesis, and Permease LptG/LptF-related
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1569_Lipopolysaccharide_biosynthesis,_and_Permease_LptG/LptF-related


id: CL:157
description: Mixed, incl. Large ribosomal subunit, and Large ribosomal subunit rRNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:157_Mixed,_incl._Large_ribosomal_subunit,_and_Large_ribosomal_subunit_rRNA_binding


id: CL:1573
description: Lipid A biosynthesis, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1573_Lipid_A_biosynthesis,_and_Lipopolysaccharide_biosynthesis


id: CL:1575
description: Lipid A biosynthesis, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1575_Lipid_A_biosynthesis,_and_Lipopolysaccharide_biosynthesis


id: CL:1602
description: ADP-L-glycero-beta-D-manno-heptose metabolic process, and Carbohydrate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1602_ADP-L-glycero-beta-D-manno-heptose_metabolic_process,_and_Carbohydrate_metabolism


id: CL:1621
description: Mixed, incl. Glycosyl transferase family 2, and Transmembrane protein TMEM64
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1621_Mixed,_incl._Glycosyl_transferase_family_2,_and_Transmembrane_protein_TMEM64


id: CL:1624
description: Mixed, incl. Glycosyl transferases group 1, and Methionine biosynthesis protein MetW
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1624_Mixed,_incl._Glycosyl_transferases_group_1,_and_Methionine_biosynthesis_protein_MetW


id: CL:1643
description: Peptidoglycan metabolic process, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1643_Peptidoglycan_metabolic_process,_and_Cell_division_site


id: CL:1645
description: Peptidoglycan metabolic process, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1645_Peptidoglycan_metabolic_process,_and_Cell_division_site


id: CL:1647
description: Peptidoglycan metabolic process, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1647_Peptidoglycan_metabolic_process,_and_Cell_division_site


id: CL:1650
description: Mixed, incl. Peptidoglycan biosynthesis, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1650_Mixed,_incl._Peptidoglycan_biosynthesis,_and_Cell_division_site


id: CL:1651
description: Cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1651_Cell_shape,_and_Cell_division_site


id: CL:1653
description: Cell cycle, and D-Alanine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1653_Cell_cycle,_and_D-Alanine_metabolism


id: CL:1658
description: Mur ligase, central, and Glycosyl transferase family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1658_Mur_ligase,_central,_and_Glycosyl_transferase_family_4


id: CL:1689
description: Mixed, incl. Cell cycle protein, and Penicillin-binding Protein dimerisation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1689_Mixed,_incl._Cell_cycle_protein,_and_Penicillin-binding_Protein_dimerisation_domain


id: CL:1698
description: Transglycosylase, and Peptidoglycan muralytic activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1698_Transglycosylase,_and_Peptidoglycan_muralytic_activity


id: CL:174
description: Mixed, incl. Large ribosomal subunit, and Initiation factor
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:174_Mixed,_incl._Large_ribosomal_subunit,_and_Initiation_factor


id: CL:1743
description: Peptidoglycan L,D-transpeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1743_Peptidoglycan_L,D-transpeptidase_activity


id: CL:1761
description: Mixed, incl. Chaperone DnaJ, and Tim44-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1761_Mixed,_incl._Chaperone_DnaJ,_and_Tim44-like_domain


id: CL:1778
description: Mixed, incl. Pyruvate metabolism, and Oxidoreductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1778_Mixed,_incl._Pyruvate_metabolism,_and_Oxidoreductase_activity


id: CL:1779
description: Mixed, incl. Pyruvate metabolism, and Oxidative phosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1779_Mixed,_incl._Pyruvate_metabolism,_and_Oxidative_phosphorylation


id: CL:1780
description: Pyruvate metabolism, and 2-Oxocarboxylic acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1780_Pyruvate_metabolism,_and_2-Oxocarboxylic_acid_metabolism


id: CL:1781
description: Pyruvate metabolism, and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1781_Pyruvate_metabolism,_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:1782
description: Pyruvate metabolism, and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1782_Pyruvate_metabolism,_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:1784
description: Citrate cycle (TCA cycle), and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1784_Citrate_cycle_(TCA_cycle),_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:1785
description: Pyruvate metabolism, and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1785_Pyruvate_metabolism,_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:1786
description: Mixed, incl. acyl-CoA biosynthetic process, and Pyruvate kinase-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1786_Mixed,_incl._acyl-CoA_biosynthetic_process,_and_Pyruvate_kinase-like_domain_superfamily


id: CL:1788
description: acetyl-CoA biosynthetic process from pyruvate, and Pyruvate carboxylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1788_acetyl-CoA_biosynthetic_process_from_pyruvate,_and_Pyruvate_carboxylase_activity


id: CL:1789
description: acetyl-CoA biosynthetic process from pyruvate
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1789_acetyl-CoA_biosynthetic_process_from_pyruvate


id: CL:1805
description: Pyruvate ferredoxin/flavodoxin oxidoreductase, and Pyruvate kinase-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1805_Pyruvate_ferredoxin/flavodoxin_oxidoreductase,_and_Pyruvate_kinase-like_domain_superfamily


id: CL:1822
description: Mixed, incl. Acetylation, and Taurine and hypotaurine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1822_Mixed,_incl._Acetylation,_and_Taurine_and_hypotaurine_metabolism


id: CL:1839
description: Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1839_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:1841
description: Valine metabolic process, and TPP-binding enzyme, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1841_Valine_metabolic_process,_and_TPP-binding_enzyme,_conserved_site


id: CL:1864
description: Mixed, incl. Tricarboxylic acid cycle, and Flavocytochrome c
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1864_Mixed,_incl._Tricarboxylic_acid_cycle,_and_Flavocytochrome_c


id: CL:1866
description: Tricarboxylic acid cycle, and Flavocytochrome c
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1866_Tricarboxylic_acid_cycle,_and_Flavocytochrome_c


id: CL:188
description: Small ribosomal subunit, and rRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:188_Small_ribosomal_subunit,_and_rRNA-binding


id: CL:1921
description: Mixed, incl. Glycine catabolic process, and Glutamate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1921_Mixed,_incl._Glycine_catabolic_process,_and_Glutamate_biosynthetic_process


id: CL:1922
description: Mixed, incl. Glycine catabolic process, and Fatty acid beta-oxidation, unsaturated, even number
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1922_Mixed,_incl._Glycine_catabolic_process,_and_Fatty_acid_beta-oxidation,_unsaturated,_even_number


id: CL:1948
description: Glutamate synthase activity, and Iron hydrogenase, subset
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1948_Glutamate_synthase_activity,_and_Iron_hydrogenase,_subset


id: CL:1967
description: Oxidative phosphorylation, and NADH metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1967_Oxidative_phosphorylation,_and_NADH_metabolic_process


id: CL:1968
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1968_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor,_and_Thioredoxin-like_[2Fe-2S]_ferredoxin

description:
  Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor, and Thioredoxin-like [2Fe-2S] ferredoxin


id: CL:1970
description: Quinone binding, and Thioredoxin-like [2Fe-2S] ferredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1970_Quinone_binding,_and_Thioredoxin-like_[2Fe-2S]_ferredoxin


id: CL:1972
description: Quinone binding, and Proton-conducting membrane transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:1972_Quinone_binding,_and_Proton-conducting_membrane_transporter


id: CL:2014
description: Mixed, incl. Respirasome, and NADH metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2014_Mixed,_incl._Respirasome,_and_NADH_metabolic_process


id: CL:2017
description: Respirasome, and Iron hydrogenase, subset
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2017_Respirasome,_and_Iron_hydrogenase,_subset


id: CL:2038
description: Mixed, incl. HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily, and 4Fe-4S domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2038_Mixed,_incl._HPr(Ser)_kinase/phosphorylase-like,_N-terminal_domain_superfamily,_and_4Fe-4S_domain


id: CL:2055
description: Mixed, incl. Valine, leucine and isoleucine degradation, and ClpP/crotonase-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2055_Mixed,_incl._Valine,_leucine_and_isoleucine_degradation,_and_ClpP/crotonase-like_domain_superfamily


id: CL:2057
description: Mixed, incl. Valine, leucine and isoleucine degradation, and ClpP/crotonase-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2057_Mixed,_incl._Valine,_leucine_and_isoleucine_degradation,_and_ClpP/crotonase-like_domain_superfamily


id: CL:2060
description: Mixed, incl. Valine, leucine and isoleucine degradation, and AMP-binding enzyme C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2060_Mixed,_incl._Valine,_leucine_and_isoleucine_degradation,_and_AMP-binding_enzyme_C-terminal_domain


id: CL:2061
description: Mixed, incl. Valine, leucine and isoleucine degradation, and Enoyl-CoA hydratase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2061_Mixed,_incl._Valine,_leucine_and_isoleucine_degradation,_and_Enoyl-CoA_hydratase,_C-terminal


id: CL:2062
description: Valine, leucine and isoleucine degradation, and Enoyl-CoA hydratase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2062_Valine,_leucine_and_isoleucine_degradation,_and_Enoyl-CoA_hydratase,_C-terminal


id: CL:2064
description: Valine, leucine and isoleucine degradation, and 3-hydroxyacyl-CoA dehydrogenase, NAD binding
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2064_Valine,_leucine_and_isoleucine_degradation,_and_3-hydroxyacyl-CoA_dehydrogenase,_NAD_binding


id: CL:2065
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2065_Mixed,_incl._Acyl-CoA_dehydrogenase,_middle_domain,_and_3-hydroxyacyl-CoA_dehydrogenase,_C-terminal_domain

description:
  Mixed, incl. Acyl-CoA dehydrogenase, middle domain, and 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain


id: CL:2067
description: Electron transfer flavoprotein domain, and Acyl-CoA dehydrogenase, middle domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2067_Electron_transfer_flavoprotein_domain,_and_Acyl-CoA_dehydrogenase,_middle_domain


id: CL:208
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:208_Structural_constituent_of_ribosome


id: CL:2081
description: Microbody, and Enoyl-CoA hydratase/isomerase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2081_Microbody,_and_Enoyl-CoA_hydratase/isomerase,_conserved_site


id: CL:2091
description: Lipid oxidation, and Sterol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2091_Lipid_oxidation,_and_Sterol_metabolic_process


id: CL:210
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:210_Structural_constituent_of_ribosome


id: CL:2113
description: CoA carboxylase activity, and Vicinal oxygen chelate (VOC) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2113_CoA_carboxylase_activity,_and_Vicinal_oxygen_chelate_(VOC)_domain


id: CL:212
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:212_Mixed,_incl._Large_ribosomal_subunit_rRNA_binding,_and_Ribosomal_protein_L7/L12,_C-terminal/adaptor_protein_ClpS-like

description:
  Mixed, incl. Large ribosomal subunit rRNA binding, and Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like


id: CL:2127
description: AMP-binding enzyme C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2127_AMP-binding_enzyme_C-terminal_domain


id: CL:2170
description: Mixed, incl. Monocarboxylic acid biosynthetic process, and Glycerolipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2170_Mixed,_incl._Monocarboxylic_acid_biosynthetic_process,_and_Glycerolipid_metabolism


id: CL:2172
description: Mixed, incl. Fatty acid biosynthetic process, and Glycerolipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2172_Mixed,_incl._Fatty_acid_biosynthetic_process,_and_Glycerolipid_metabolism


id: CL:2173
description: Fatty acid biosynthetic process, and KR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2173_Fatty_acid_biosynthetic_process,_and_KR_domain


id: CL:2175
description: Fatty acid synthase activity, and Acyl carrier protein (ACP)
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2175_Fatty_acid_synthase_activity,_and_Acyl_carrier_protein_(ACP)


id: CL:2227
description: Mixed, incl. Fatty acid biosynthetic process, and Methyltransferase, class B
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2227_Mixed,_incl._Fatty_acid_biosynthetic_process,_and_Methyltransferase,_class_B


id: CL:2229
description: Mixed, incl. Terpenoid metabolic process, and O-methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2229_Mixed,_incl._Terpenoid_metabolic_process,_and_O-methyltransferase_domain


id: CL:2251
description: Beta-ketoacyl synthase, active site, and FabA-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2251_Beta-ketoacyl_synthase,_active_site,_and_FabA-like_domain


id: CL:2268
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2268_Mixed,_incl._Biotin_metabolic_process,_and_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity

description:
  Mixed, incl. Biotin metabolic process, and 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity


id: CL:2270
description: Biotin metabolic process, and 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2270_Biotin_metabolic_process,_and_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity


id: CL:2293
description: Mixed, incl. Naphthalene degradation, and Beta-lactamase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2293_Mixed,_incl._Naphthalene_degradation,_and_Beta-lactamase_activity


id: CL:2294
description: Naphthalene degradation, and Zinc-binding dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2294_Naphthalene_degradation,_and_Zinc-binding_dehydrogenase


id: CL:2307
description: Mixed, incl. Beta-lactamase activity, and Lon protease (S16) C-terminal proteolytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2307_Mixed,_incl._Beta-lactamase_activity,_and_Lon_protease_(S16)_C-terminal_proteolytic_domain


id: CL:2317
description: Mixed, incl. Cellular respiration, and Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2317_Mixed,_incl._Cellular_respiration,_and_Prosthetic_group_metabolic_process


id: CL:2318
description: Cellular respiration, and Aldehyde ferredoxin oxidoreductase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2318_Cellular_respiration,_and_Aldehyde_ferredoxin_oxidoreductase,_C-terminal


id: CL:2319
description: Mixed, incl. Methanogenesis, and Aldehyde ferredoxin oxidoreductase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2319_Mixed,_incl._Methanogenesis,_and_Aldehyde_ferredoxin_oxidoreductase,_C-terminal


id: CL:232
description: Mixed, incl. L28p-like, and Large ribosomal subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:232_Mixed,_incl._L28p-like,_and_Large_ribosomal_subunit


id: CL:2320
description: Aldehyde ferredoxin oxidoreductase, C-terminal, and Degradation of aromatic compounds
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2320_Aldehyde_ferredoxin_oxidoreductase,_C-terminal,_and_Degradation_of_aromatic_compounds


id: CL:2322
description: Aldehyde ferredoxin oxidoreductase, C-terminal, and Degradation of aromatic compounds
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2322_Aldehyde_ferredoxin_oxidoreductase,_C-terminal,_and_Degradation_of_aromatic_compounds


id: CL:2324
description: Mixed, incl. Zinc-binding dehydrogenase, and Nucleoside bisphosphate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2324_Mixed,_incl._Zinc-binding_dehydrogenase,_and_Nucleoside_bisphosphate_catabolic_process


id: CL:2353
description: Methanogenesis, and Methyl-viologen-reducing hydrogenase, delta subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2353_Methanogenesis,_and_Methyl-viologen-reducing_hydrogenase,_delta_subunit


id: CL:2355
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2355_H(2):CoB-CoM_heterodisulfide,ferredoxin_reductase_subunit_A-like,_and_Methyl-viologen-reducing_hydrogenase,_delta_subunit

description:
  H(2):CoB-CoM heterodisulfide,ferredoxin reductase subunit A-like, and Methyl-viologen-reducing hydrogenase, delta subunit


id: CL:2378
description: Formate dehydrogenase complex, and Anaerobic respiration
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2378_Formate_dehydrogenase_complex,_and_Anaerobic_respiration


id: CL:2379
description: Formate dehydrogenase complex, and Ferric iron binding
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2379_Formate_dehydrogenase_complex,_and_Ferric_iron_binding


id: CL:2381
description: Formate dehydrogenase (NAD+) activity, and Ferric iron binding
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2381_Formate_dehydrogenase_(NAD+)_activity,_and_Ferric_iron_binding


id: CL:2382
description: Formate dehydrogenase (NAD+) activity, and Ferric iron binding
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2382_Formate_dehydrogenase_(NAD+)_activity,_and_Ferric_iron_binding


id: CL:2391
description: Formate dehydrogenase (NAD+) activity, and Ferric iron binding
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2391_Formate_dehydrogenase_(NAD+)_activity,_and_Ferric_iron_binding


id: CL:2408
description: Mixed, incl. Molydopterin dinucleotide binding domain, and Peptide binding
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2408_Mixed,_incl._Molydopterin_dinucleotide_binding_domain,_and_Peptide_binding


id: CL:2419
description: Mixed, incl. Prosthetic group metabolic process, and Molybdate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2419_Mixed,_incl._Prosthetic_group_metabolic_process,_and_Molybdate_ion_transport


id: CL:2420
description: Prosthetic group metabolic process, and PBP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2420_Prosthetic_group_metabolic_process,_and_PBP_domain


id: CL:2421
description: Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2421_Prosthetic_group_metabolic_process


id: CL:2422
description: Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2422_Prosthetic_group_metabolic_process


id: CL:2426
description: MoaB/Mog domain, and Molybdenum cofactor biosynthesis protein A
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2426_MoaB/Mog_domain,_and_Molybdenum_cofactor_biosynthesis_protein_A


id: CL:2453
description: FdhD/NarQ family, and Acetylene hydratase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2453_FdhD/NarQ_family,_and_Acetylene_hydratase_activity


id: CL:2463
description: Mixed, incl. PBP domain, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2463_Mixed,_incl._PBP_domain,_and_4Fe-4S_binding_domain


id: CL:2496
description: Mixed, incl. Rubredoxin-like domain, and Ferric uptake regulator family
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2496_Mixed,_incl._Rubredoxin-like_domain,_and_Ferric_uptake_regulator_family


id: CL:2498
description: Mixed, incl. Rubredoxin-like domain, and Rubredoxin-oxygen oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2498_Mixed,_incl._Rubredoxin-like_domain,_and_Rubredoxin-oxygen_oxidoreductase


id: CL:2500
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2500_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors,_and_Rubredoxin-like_domain

description:
  Oxidoreductase activity, acting on other nitrogenous compounds as donors, and Rubredoxin-like domain


id: CL:2538
description: Mixed, incl. Antioxidant activity, and Metallo-beta-lactamase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2538_Mixed,_incl._Antioxidant_activity,_and_Metallo-beta-lactamase_superfamily


id: CL:2539
description: Mixed, incl. Metallo-beta-lactamase superfamily, and Antioxidant activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2539_Mixed,_incl._Metallo-beta-lactamase_superfamily,_and_Antioxidant_activity


id: CL:2540
description: Mixed, incl. Metallo-beta-lactamase superfamily, and Reactive oxygen species metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2540_Mixed,_incl._Metallo-beta-lactamase_superfamily,_and_Reactive_oxygen_species_metabolic_process


id: CL:2543
description: Mixed, incl. Lactate metabolic process, and Reactive oxygen species metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2543_Mixed,_incl._Lactate_metabolic_process,_and_Reactive_oxygen_species_metabolic_process


id: CL:2544
description: Lactate metabolic process, and Catalase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2544_Lactate_metabolic_process,_and_Catalase_activity


id: CL:2546
description: Lactate metabolic process, and Rhodanese Homology Domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2546_Lactate_metabolic_process,_and_Rhodanese_Homology_Domain


id: CL:2563
description: Superoxide dismutase activity, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2563_Superoxide_dismutase_activity,_and_4Fe-4S_dicluster_domain


id: CL:2578
description: Sulphur transport, and Domain of unknown function (DUF362)
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2578_Sulphur_transport,_and_Domain_of_unknown_function_(DUF362)


id: CL:2601
description: Mixed, incl. Thiosulfate sulfurtransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2601_Mixed,_incl._Thiosulfate_sulfurtransferase_activity


id: CL:263
description: Transcription termination, and K Homology domain, type 1
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:263_Transcription_termination,_and_K_Homology_domain,_type_1


id: CL:2633
description: Signaling, and Protein serine/threonine phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2633_Signaling,_and_Protein_serine/threonine_phosphatase_activity


id: CL:2634
description: Signaling, and Protein serine/threonine phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2634_Signaling,_and_Protein_serine/threonine_phosphatase_activity


id: CL:2636
description: Signaling, and Protein serine/threonine phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2636_Signaling,_and_Protein_serine/threonine_phosphatase_activity


id: CL:2657
description: PAS domain, and cheY-homologous receiver domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2657_PAS_domain,_and_cheY-homologous_receiver_domain


id: CL:2660
description: PAS domain, and cheY-homologous receiver domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2660_PAS_domain,_and_cheY-homologous_receiver_domain


id: CL:2663
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2663_Motif_C-terminal_to_PAS_motifs_(likely_to_contribute_to_PAS_structural_domain),_and_cheY-homologous_receiver_domain

description:
  Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain), and cheY-homologous receiver domain


id: CL:2667
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2667_Motif_C-terminal_to_PAS_motifs_(likely_to_contribute_to_PAS_structural_domain),_and_cheY-homologous_receiver_domain

description:
  Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain), and cheY-homologous receiver domain


id: CL:2670
description: Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain), and HAMP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2670_Motif_C-terminal_to_PAS_motifs_(likely_to_contribute_to_PAS_structural_domain),_and_HAMP_domain


id: CL:2675
description: Signal transduction histidine kinase, dimerisation/phosphoacceptor domain, and PocR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2675_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain,_and_PocR_domain


id: CL:2679
description: Signal transduction histidine kinase, dimerisation/phosphoacceptor domain, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2679_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain,_and_Diguanylate_cyclase


id: CL:2681
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2681_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain,_and_HPT_domain_superfamily

description:
  Signal transduction histidine kinase, dimerisation/phosphoacceptor domain, and HPT domain superfamily


id: CL:2683
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2683_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain,_and_HPT_domain_superfamily

description:
  Signal transduction histidine kinase, dimerisation/phosphoacceptor domain, and HPT domain superfamily


id: CL:2686
description: Signal transduction histidine kinase, dimerisation/phosphoacceptor domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2686_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain


id: CL:2742
description: Mixed, incl. Periplasmic sensor domain, and HPT domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2742_Mixed,_incl._Periplasmic_sensor_domain,_and_HPT_domain_superfamily


id: CL:2757
description: CheW-like domain, and Cache domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2757_CheW-like_domain,_and_Cache_domain


id: CL:2843
description: Protein-glutamine glutaminase activity, and CheW-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2843_Protein-glutamine_glutaminase_activity,_and_CheW-like_domain


id: CL:2845
description: Protein-glutamine glutaminase activity, and Chemotaxis receptor methyltransferase CheR, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2845_Protein-glutamine_glutaminase_activity,_and_Chemotaxis_receptor_methyltransferase_CheR,_N-terminal


id: CL:2857
description: Chemotaxis protein CheW, and Demethylation
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2857_Chemotaxis_protein_CheW,_and_Demethylation


id: CL:2880
description: Sigma-54 interaction domain, ATP-binding site 2, and Periplasmic sensor-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2880_Sigma-54_interaction_domain,_ATP-binding_site_2,_and_Periplasmic_sensor-like_domain_superfamily


id: CL:291
description: Proton-transporting ATP synthase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:291_Proton-transporting_ATP_synthase_complex


id: CL:2910
description: STAS domain, and PPM-type phosphatase-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2910_STAS_domain,_and_PPM-type_phosphatase-like_domain


id: CL:2926
description: Mixed, incl. Protein kinase domain, and Tetratricopeptide repeat 1
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2926_Mixed,_incl._Protein_kinase_domain,_and_Tetratricopeptide_repeat_1


id: CL:2955
description: Chemotaxis phosphatase CheX-like domain, and cyclic-di-GMP binding
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2955_Chemotaxis_phosphatase_CheX-like_domain,_and_cyclic-di-GMP_binding


id: CL:2969
description: Cilium, and Motility protein A-like
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2969_Cilium,_and_Motility_protein_A-like


id: CL:2976
description: Bacterial flagellum, and Bacterial flagellum biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2976_Bacterial_flagellum,_and_Bacterial_flagellum_biogenesis


id: CL:2992
description: Bacterial-type flagellum basal body, distal rod, and Flagella basal body rod protein
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:2992_Bacterial-type_flagellum_basal_body,_distal_rod,_and_Flagella_basal_body_rod_protein


id: CL:3003
description: Bacterial flagellum protein export, and Bacterial-type flagellum assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3003_Bacterial_flagellum_protein_export,_and_Bacterial-type_flagellum_assembly


id: CL:3016
description: Mixed, incl. Bacterial-type flagellum hook, and Protein secretion by the type III secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3016_Mixed,_incl._Bacterial-type_flagellum_hook,_and_Protein_secretion_by_the_type_III_secretion_system


id: CL:3069
description: Mixed, incl. cyclic-di-GMP binding, and CheY-P phosphatase CheX-like
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3069_Mixed,_incl._cyclic-di-GMP_binding,_and_CheY-P_phosphatase_CheX-like


id: CL:3095
description: Mixed, incl. FlhB HrpN YscU SpaS Family, and Peptidyl-histidine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3095_Mixed,_incl._FlhB_HrpN_YscU_SpaS_Family,_and_Peptidyl-histidine_modification


id: CL:3106
description: Mixed, incl. FecR protein, and Outer membrane protein, bacterial
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3106_Mixed,_incl._FecR_protein,_and_Outer_membrane_protein,_bacterial


id: CL:311
description: Proton-transporting ATP synthase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:311_Proton-transporting_ATP_synthase_complex


id: CL:3110
description: FecR protein, and Outer membrane protein, bacterial
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3110_FecR_protein,_and_Outer_membrane_protein,_bacterial


id: CL:3129
description: Mixed, incl. Purine nucleobase metabolic process, and Protein serine kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3129_Mixed,_incl._Purine_nucleobase_metabolic_process,_and_Protein_serine_kinase_activity


id: CL:3131
description: Hypoxanthine metabolic process, and MobA-like NTP transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3131_Hypoxanthine_metabolic_process,_and_MobA-like_NTP_transferase


id: CL:3141
description: Protein serine kinase activity, and Aminotransferase class-V
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3141_Protein_serine_kinase_activity,_and_Aminotransferase_class-V


id: CL:3155
description: Amino acid transport, and NMT1/THI5 family
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3155_Amino_acid_transport,_and_NMT1/THI5_family


id: CL:3158
description: ABC transporter, permease, and Branched-chain amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3158_ABC_transporter,_permease,_and_Branched-chain_amino_acid_transport


id: CL:3169
description: Mixed, incl. NMT1/THI5 family, and Leucine binding
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3169_Mixed,_incl._NMT1/THI5_family,_and_Leucine_binding


id: CL:3178
description: Mostly uncharacterized, incl. Alpha/Beta hydrolase fold, and AI-2E family transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3178_Mostly_uncharacterized,_incl._Alpha/Beta_hydrolase_fold,_and_AI-2E_family_transporter


id: CL:3180
description: Mixed, incl. Ion channel, and Alpha/Beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3180_Mixed,_incl._Ion_channel,_and_Alpha/Beta_hydrolase_fold


id: CL:3182
description: Mixed, incl. ABC-type transport auxiliary lipoprotein component, and Mce/MlaD
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3182_Mixed,_incl._ABC-type_transport_auxiliary_lipoprotein_component,_and_Mce/MlaD


id: CL:3184
description: Mixed, incl. ABC-type transport auxiliary lipoprotein component, and Mce/MlaD
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3184_Mixed,_incl._ABC-type_transport_auxiliary_lipoprotein_component,_and_Mce/MlaD


id: CL:3204
description: Mixed, incl. AI-2E family transporter, and Dienelactone hydrolase family
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3204_Mixed,_incl._AI-2E_family_transporter,_and_Dienelactone_hydrolase_family


id: CL:3220
description: Mixed, incl. Single Cache domain 2, and Dienelactone hydrolase family
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3220_Mixed,_incl._Single_Cache_domain_2,_and_Dienelactone_hydrolase_family


id: CL:3231
description: Mixed, incl. Sister chromatid cohesion, and Heme binding
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3231_Mixed,_incl._Sister_chromatid_cohesion,_and_Heme_binding


id: CL:3240
description: Mixed, incl. Potassium ion transport, and Aerobic electron transport chain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3240_Mixed,_incl._Potassium_ion_transport,_and_Aerobic_electron_transport_chain


id: CL:3241
description: Mixed, incl. Potassium ion transport, and Aerobic electron transport chain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3241_Mixed,_incl._Potassium_ion_transport,_and_Aerobic_electron_transport_chain


id: CL:3243
description: Mixed, incl. Potassium ion transport, and Aerobic electron transport chain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3243_Mixed,_incl._Potassium_ion_transport,_and_Aerobic_electron_transport_chain


id: CL:3245
description: Potassium ion transport, and PTS EIIA type-2 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3245_Potassium_ion_transport,_and_PTS_EIIA_type-2_domain


id: CL:325
description: Mixed, incl. RNA helicase activity, and Exoribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:325_Mixed,_incl._RNA_helicase_activity,_and_Exoribonuclease_activity


id: CL:3267
description: Mixed, incl. Ion channel, and Aerobic electron transport chain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3267_Mixed,_incl._Ion_channel,_and_Aerobic_electron_transport_chain


id: CL:327
description: Mixed, incl. Exoribonuclease activity, and mRNA processing
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:327_Mixed,_incl._Exoribonuclease_activity,_and_mRNA_processing


id: CL:3289
description: Mixed, incl. ER-Phagosome pathway, and Bacterial-type flagellum organization
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3289_Mixed,_incl._ER-Phagosome_pathway,_and_Bacterial-type_flagellum_organization


id: CL:3301
description: Mixed, incl. Iron-sulfur cluster assembly, and Degradation of aromatic compounds
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3301_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Degradation_of_aromatic_compounds


id: CL:3303
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3303_Mixed,_incl._Degradation_of_aromatic_compounds,_and_Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond

description:
  Mixed, incl. Degradation of aromatic compounds, and Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond


id: CL:3304
description: Mixed, incl. FldB/FldC dehydratase alpha/beta subunit, and CoA enzyme activase
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3304_Mixed,_incl._FldB/FldC_dehydratase_alpha/beta_subunit,_and_CoA_enzyme_activase


id: CL:3305
description: FldB/FldC dehydratase alpha/beta subunit, and CoA enzyme activase
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3305_FldB/FldC_dehydratase_alpha/beta_subunit,_and_CoA_enzyme_activase


id: CL:3307
description: FldB/FldC dehydratase alpha/beta subunit, and CoA enzyme activase
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3307_FldB/FldC_dehydratase_alpha/beta_subunit,_and_CoA_enzyme_activase


id: CL:3317
description: Mixed, incl. FldB/FldC dehydratase alpha/beta subunit, and NMT1-like family
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3317_Mixed,_incl._FldB/FldC_dehydratase_alpha/beta_subunit,_and_NMT1-like_family


id: CL:3328
description: Mixed, incl. Uroporphyrinogen decarboxylase (URO-D), and B12 binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3328_Mixed,_incl._Uroporphyrinogen_decarboxylase_(URO-D),_and_B12_binding_domain


id: CL:3344
description: Mixed, incl. Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, and Selenium
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3344_Mixed,_incl._Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond,_and_Selenium


id: CL:3346
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3346_Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond,_and_Glycine_reductase_complex_selenoprotein_A

description:
  Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, and Glycine reductase complex selenoprotein A


id: CL:3369
description: Mixed, incl. Iron-sulfur cluster assembly, and Iron ion homeostasis
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3369_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Iron_ion_homeostasis


id: CL:3370
description: Iron-sulfur cluster assembly, and Aminotransferase class V domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3370_Iron-sulfur_cluster_assembly,_and_Aminotransferase_class_V_domain


id: CL:3373
description: Iron-sulfur cluster assembly, and Cysteine desulfurase-related, unknown function
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3373_Iron-sulfur_cluster_assembly,_and_Cysteine_desulfurase-related,_unknown_function


id: CL:3375
description: Nitrogen fixation, NifU, and [2Fe-2S] cluster assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3375_Nitrogen_fixation,_NifU,_and_[2Fe-2S]_cluster_assembly


id: CL:3385
description: Iron-sulfur cluster assembly complex, and Cysteine desulfurase-related, unknown function
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3385_Iron-sulfur_cluster_assembly_complex,_and_Cysteine_desulfurase-related,_unknown_function


id: CL:3405
description: Mixed, incl. Iron ion homeostasis, and Heavy-metal-associated, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3405_Mixed,_incl._Iron_ion_homeostasis,_and_Heavy-metal-associated,_conserved_site


id: CL:3408
description: Heavy-metal-associated, conserved site, and MerR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3408_Heavy-metal-associated,_conserved_site,_and_MerR-type_HTH_domain


id: CL:3422
description: Iron ion homeostasis, and Pore complex
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3422_Iron_ion_homeostasis,_and_Pore_complex


id: CL:3436
description: Mixed, incl. Anaerobic coproporphyrinogen-III oxidase, and RNA methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3436_Mixed,_incl._Anaerobic_coproporphyrinogen-III_oxidase,_and_RNA_methylation


id: CL:3438
description: Mixed, incl. Anaerobic coproporphyrinogen-III oxidase, and Regulation of pH
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3438_Mixed,_incl._Anaerobic_coproporphyrinogen-III_oxidase,_and_Regulation_of_pH


id: CL:3459
description: Mixed, incl. tRNA methylation, and PUA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3459_Mixed,_incl._tRNA_methylation,_and_PUA_domain


id: CL:3477
description: Mixed, incl. Carbohydrate metabolic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3477_Mixed,_incl._Carbohydrate_metabolic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:3478
description: Mixed, incl. Carbohydrate metabolic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3478_Mixed,_incl._Carbohydrate_metabolic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:3479
description: Mixed, incl. Carbohydrate metabolic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3479_Mixed,_incl._Carbohydrate_metabolic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:3481
description: Mixed, incl. Carbohydrate metabolic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3481_Mixed,_incl._Carbohydrate_metabolic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:3482
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3482_Mixed,_incl._Amino_sugar_and_nucleotide_sugar_metabolism,_and_Cellular_polysaccharide_biosynthetic_process

description:
  Mixed, incl. Amino sugar and nucleotide sugar metabolism, and Cellular polysaccharide biosynthetic process


id: CL:3483
description: Mixed, incl. Amino sugar and nucleotide sugar metabolism, and Glycosyltransferase 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3483_Mixed,_incl._Amino_sugar_and_nucleotide_sugar_metabolism,_and_Glycosyltransferase_2-like


id: CL:3484
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3484_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Cellular_polysaccharide_biosynthetic_process

description:
  Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Cellular polysaccharide biosynthetic process


id: CL:3485
description: Amino sugar and nucleotide sugar metabolism, and Cellular polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3485_Amino_sugar_and_nucleotide_sugar_metabolism,_and_Cellular_polysaccharide_biosynthetic_process


id: CL:3486
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3486_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyltransferase_subfamily_4-like,_N-terminal_domain

description:
  Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyltransferase subfamily 4-like, N-terminal domain


id: CL:3487
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3487_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyltransferase_subfamily_4-like,_N-terminal_domain

description:
  Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyltransferase subfamily 4-like, N-terminal domain


id: CL:3488
description: O-Antigen nucleotide sugar biosynthesis, and Amino sugar biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3488_O-Antigen_nucleotide_sugar_biosynthesis,_and_Amino_sugar_biosynthetic_process


id: CL:3489
description: Nucleotide-sugar biosynthetic process, and DegT/DnrJ/EryC1/StrS aminotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3489_Nucleotide-sugar_biosynthetic_process,_and_DegT/DnrJ/EryC1/StrS_aminotransferase


id: CL:3491
description: Amino sugar biosynthetic process, and UDP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3491_Amino_sugar_biosynthetic_process,_and_UDP_binding_domain


id: CL:3512
description: Mannose-6-phosphate isomerase, type II, C-terminal, and Alpha-D-phosphohexomutase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3512_Mannose-6-phosphate_isomerase,_type_II,_C-terminal,_and_Alpha-D-phosphohexomutase_superfamily


id: CL:3527
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3527_Mixed,_incl._Glycosyltransferase_subfamily_4-like,_N-terminal_domain,_and_Polysaccharide_pyruvyl_transferase

description:
  Mixed, incl. Glycosyltransferase subfamily 4-like, N-terminal domain, and Polysaccharide pyruvyl transferase


id: CL:3528
description: Mixed, incl. Glycosyl transferase 4-like, and Glycosyl transferase 4-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3528_Mixed,_incl._Glycosyl_transferase_4-like,_and_Glycosyl_transferase_4-like_domain


id: CL:3541
description: Mixed, incl. Polysaccharide biosynthesis C-terminal domain, and Polysaccharide pyruvyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3541_Mixed,_incl._Polysaccharide_biosynthesis_C-terminal_domain,_and_Polysaccharide_pyruvyl_transferase


id: CL:3550
description: Mixed, incl. Alanine transport, and Domain of unknown function DUF4372
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3550_Mixed,_incl._Alanine_transport,_and_Domain_of_unknown_function_DUF4372


id: CL:3559
description: Mixed, incl. Iron-sulfur cluster-binding domain, and Pentose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3559_Mixed,_incl._Iron-sulfur_cluster-binding_domain,_and_Pentose_metabolic_process


id: CL:3561
description: Mixed, incl. Ubiquinone metabolic process, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3561_Mixed,_incl._Ubiquinone_metabolic_process,_and_Glycosyl_transferases_group_1


id: CL:3577
description: Mixed, incl. Iron-sulfur cluster-binding domain, and KdsC family
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3577_Mixed,_incl._Iron-sulfur_cluster-binding_domain,_and_KdsC_family


id: CL:3591
description: Mixed, incl. ABC-2 type transporter, and Methyltransferase FkbM
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3591_Mixed,_incl._ABC-2_type_transporter,_and_Methyltransferase_FkbM


id: CL:3607
description: Mixed, incl. Glycosyltransferase 2-like, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3607_Mixed,_incl._Glycosyltransferase_2-like,_and_Glycosyl_transferases_group_1


id: CL:3610
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3610_Mixed,_incl._Acylneuraminate_cytidylyltransferase,_and_D-isomer_specific_2-hydroxyacid_dehydrogenase,_NAD-binding_domain_conserved_site

description:
  Mixed, incl. Acylneuraminate cytidylyltransferase, and D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site


id: CL:3623
description: Glycosyl transferases group 1, and Protein N-linked glycosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3623_Glycosyl_transferases_group_1,_and_Protein_N-linked_glycosylation


id: CL:3638
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3638_Mixed,_incl._Polysaccharide_export_protein,_and_TonB-dependent_receptor-like,_beta-barrel_domain_superfamily

description:
  Mixed, incl. Polysaccharide export protein, and TonB-dependent receptor-like, beta-barrel domain superfamily


id: CL:3639
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3639_Mixed,_incl._Polysaccharide_export_protein,_and_TonB-dependent_receptor-like,_beta-barrel_domain_superfamily

description:
  Mixed, incl. Polysaccharide export protein, and TonB-dependent receptor-like, beta-barrel domain superfamily


id: CL:3641
description: Mixed, incl. Protein tyrosine kinase activity, and Polysaccharide export protein
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3641_Mixed,_incl._Protein_tyrosine_kinase_activity,_and_Polysaccharide_export_protein


id: CL:3642
description: Mixed, incl. Protein tyrosine kinase activity, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3642_Mixed,_incl._Protein_tyrosine_kinase_activity,_and_Tetratricopeptide_repeat


id: CL:3653
description: Mixed, incl. Vacuole, and Protein tyrosine kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3653_Mixed,_incl._Vacuole,_and_Protein_tyrosine_kinase_activity


id: CL:3673
description: Glutathione metabolism, and Protein N-linked glycosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3673_Glutathione_metabolism,_and_Protein_N-linked_glycosylation


id: CL:3687
description: Starch and sucrose metabolism, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3687_Starch_and_sucrose_metabolism,_and_Glycosyl_transferases_group_1


id: CL:3688
description: Starch and sucrose metabolism, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3688_Starch_and_sucrose_metabolism,_and_Glycosyl_transferases_group_1


id: CL:369
description: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:369_Aminoacyl-tRNA_synthetase,_class_Ia,_anticodon-binding


id: CL:3690
description: Starch and sucrose metabolism, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3690_Starch_and_sucrose_metabolism,_and_Glycosyl_transferases_group_1


id: CL:3691
description: Starch and sucrose metabolism, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3691_Starch_and_sucrose_metabolism,_and_Glycosyl_transferases_group_1


id: CL:3692
description: Glycogen phosphorylase activity, and Alpha amylase, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3692_Glycogen_phosphorylase_activity,_and_Alpha_amylase,_catalytic_domain


id: CL:3696
description: Glycogen metabolic process, and Starch synthase, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3696_Glycogen_metabolic_process,_and_Starch_synthase,_catalytic_domain


id: CL:3699
description: Glycogen metabolic process, and Starch synthase, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3699_Glycogen_metabolic_process,_and_Starch_synthase,_catalytic_domain


id: CL:3721
description: Glycosyl transferases group 1, and Hexapeptide repeat of succinyl-transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3721_Glycosyl_transferases_group_1,_and_Hexapeptide_repeat_of_succinyl-transferase


id: CL:3732
description: Trehalose metabolic process, and Cation transport ATPase (P-type)
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3732_Trehalose_metabolic_process,_and_Cation_transport_ATPase_(P-type)


id: CL:3753
description: Glycosyl transferase 4-like domain, and Acyl-CoA N-acyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3753_Glycosyl_transferase_4-like_domain,_and_Acyl-CoA_N-acyltransferase


id: CL:3769
description: Mixed, incl. NADPH-dependent FMN reductase-like, and Ferrous iron binding
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3769_Mixed,_incl._NADPH-dependent_FMN_reductase-like,_and_Ferrous_iron_binding


id: CL:3771
description: Mixed, incl. Aminoglycoside phosphotransferase, and HIT-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3771_Mixed,_incl._Aminoglycoside_phosphotransferase,_and_HIT-like_superfamily


id: CL:3783
description: Mixed, incl. Ferrous iron binding, and Epoxyqueuosine reductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3783_Mixed,_incl._Ferrous_iron_binding,_and_Epoxyqueuosine_reductase_activity


id: CL:3792
description: Mixed, incl. Queuosine metabolic process, and Membrane-bounded organelle
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3792_Mixed,_incl._Queuosine_metabolic_process,_and_Membrane-bounded_organelle


id: CL:3793
description: Queuosine metabolic process, and Parallel beta-helix repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3793_Queuosine_metabolic_process,_and_Parallel_beta-helix_repeats


id: CL:3805
description: Mixed, incl. Parallel beta-helix repeats, and Domain of unknown function (DUF4372)
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3805_Mixed,_incl._Parallel_beta-helix_repeats,_and_Domain_of_unknown_function_(DUF4372)


id: CL:3815
description: Mixed, incl. Glutaredoxin, and Photosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3815_Mixed,_incl._Glutaredoxin,_and_Photosynthesis


id: CL:382
description: Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm, and tRNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:382_Class_I_and_II_aminoacyl-tRNA_synthetase,_tRNA-binding_arm,_and_tRNA-binding_domain


id: CL:3834
description: Mixed, incl. FAD dependent protein, and Glycosyltransferase RgtA/B/C/D-like
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3834_Mixed,_incl._FAD_dependent_protein,_and_Glycosyltransferase_RgtA/B/C/D-like


id: CL:3853
description: Mixed, incl. Bacterial secretion system, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3853_Mixed,_incl._Bacterial_secretion_system,_and_Response_to_virus


id: CL:3854
description: Mixed, incl. Bacterial secretion system, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3854_Mixed,_incl._Bacterial_secretion_system,_and_Response_to_virus


id: CL:3856
description: Mixed, incl. Bacterial secretion system, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3856_Mixed,_incl._Bacterial_secretion_system,_and_Response_to_virus


id: CL:3857
description: Mostly uncharacterized, incl. Response to virus, and Cellular metal ion homeostasis
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3857_Mostly_uncharacterized,_incl._Response_to_virus,_and_Cellular_metal_ion_homeostasis


id: CL:3858
description: Mixed, incl. Response to virus, and Cellular metal ion homeostasis
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3858_Mixed,_incl._Response_to_virus,_and_Cellular_metal_ion_homeostasis


id: CL:3859
description: Mostly uncharacterized, incl. Cellular metal ion homeostasis, and LTXXQ motif family protein
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3859_Mostly_uncharacterized,_incl._Cellular_metal_ion_homeostasis,_and_LTXXQ_motif_family_protein


id: CL:3861
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3861_Mostly_uncharacterized,_incl._LTXXQ_motif_family_protein,_and_PD-(D/E)XK_endonuclease-like_domain_superfamily

description:
  Mostly uncharacterized, incl. LTXXQ motif family protein, and PD-(D/E)XK endonuclease-like domain superfamily


id: CL:3862
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3862_Mostly_uncharacterized,_incl._LTXXQ_motif_family_protein,_and_PD-(D/E)XK_endonuclease-like_domain_superfamily

description:
  Mostly uncharacterized, incl. LTXXQ motif family protein, and PD-(D/E)XK endonuclease-like domain superfamily


id: CL:3864
description: Mixed, incl. PD-(D/E)XK endonuclease-like domain superfamily, and PilZ domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3864_Mixed,_incl._PD-(D/E)XK_endonuclease-like_domain_superfamily,_and_PilZ_domain


id: CL:3866
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3866_Mixed,_incl._PD-(D/E)XK_endonuclease-like_domain_superfamily,_and_Endonuclease/exonuclease/phosphatase

description:
  Mixed, incl. PD-(D/E)XK endonuclease-like domain superfamily, and Endonuclease/exonuclease/phosphatase


id: CL:3871
description: PD-(D/E)XK endonuclease-like domain superfamily, and Outer membrane lipoprotein BamD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3871_PD-(D/E)XK_endonuclease-like_domain_superfamily,_and_Outer_membrane_lipoprotein_BamD-like


id: CL:3898
description: Mixed, incl. LTXXQ motif family protein, and Single-species biofilm formation
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3898_Mixed,_incl._LTXXQ_motif_family_protein,_and_Single-species_biofilm_formation


id: CL:3902
description: Mixed, incl. TolB, N-terminal, and SPOR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3902_Mixed,_incl._TolB,_N-terminal,_and_SPOR_domain


id: CL:3921
description: Mixed, incl. Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter, and NlpC/P60 family
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3921_Mixed,_incl._Putative_F0F1-ATPase_subunit_Ca2+/Mg2+_transporter,_and_NlpC/P60_family


id: CL:3937
description: Mixed, incl. Dinitrogenase iron-molybdenum cofactor, and Response to starvation
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3937_Mixed,_incl._Dinitrogenase_iron-molybdenum_cofactor,_and_Response_to_starvation


id: CL:3938
description: Mixed, incl. Response to starvation, and Putative regulatory protein
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3938_Mixed,_incl._Response_to_starvation,_and_Putative_regulatory_protein


id: CL:3949
description: Mixed, incl. Alpha/beta hydrolase fold, and Negative regulation of molecular function
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3949_Mixed,_incl._Alpha/beta_hydrolase_fold,_and_Negative_regulation_of_molecular_function


id: CL:3960
description: Response to virus, and Homeobox-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3960_Response_to_virus,_and_Homeobox-like_domain_superfamily


id: CL:3962
description: Response to virus, and Phosphorelay signal transduction system
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3962_Response_to_virus,_and_Phosphorelay_signal_transduction_system


id: CL:3966
description: RAMP superfamily, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3966_RAMP_superfamily,_and_Response_to_virus


id: CL:3991
description: Mostly uncharacterized, incl. SIS domain, and Virulence factor BrkB
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3991_Mostly_uncharacterized,_incl._SIS_domain,_and_Virulence_factor_BrkB


id: CL:3993
description: Mostly uncharacterized, incl. SIS domain, and Coenzyme F420 binding
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3993_Mostly_uncharacterized,_incl._SIS_domain,_and_Coenzyme_F420_binding


id: CL:3996
description: Mixed, incl. SIS domain, and Uridylyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:3996_Mixed,_incl._SIS_domain,_and_Uridylyltransferase_activity


id: CL:4026
description: Bacterial secretion system, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4026_Bacterial_secretion_system,_and_Pilus_organization


id: CL:4027
description: Protein secretion by the type II secretion system, and Bacterial secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4027_Protein_secretion_by_the_type_II_secretion_system,_and_Bacterial_secretion_system


id: CL:4030
description: Protein secretion by the type II secretion system, and NolW-like
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4030_Protein_secretion_by_the_type_II_secretion_system,_and_NolW-like


id: CL:4033
description: Protein secretion by the type II secretion system, and GspK, central domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4033_Protein_secretion_by_the_type_II_secretion_system,_and_GspK,_central_domain_superfamily


id: CL:4055
description: Mixed, incl. Prokaryotic N-terminal methylation site, and NolW-like
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4055_Mixed,_incl._Prokaryotic_N-terminal_methylation_site,_and_NolW-like


id: CL:4060
description: Mixed, incl. Prokaryotic N-terminal methylation site, and NolW-like
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4060_Mixed,_incl._Prokaryotic_N-terminal_methylation_site,_and_NolW-like


id: CL:4078
description: Mixed, incl. Pilus organization, and Prokaryotic N-terminal methylation site
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4078_Mixed,_incl._Pilus_organization,_and_Prokaryotic_N-terminal_methylation_site


id: CL:4079
description: Mixed, incl. Pilus organization, and Cell division protein FtsA
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4079_Mixed,_incl._Pilus_organization,_and_Cell_division_protein_FtsA


id: CL:4082
description: Type II/IV secretion system protein, and T2SS_GspF/T4SS_PilC conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4082_Type_II/IV_secretion_system_protein,_and_T2SS_GspF/T4SS_PilC_conserved_site


id: CL:4111
description: Prokaryotic N-terminal methylation site, and PilX N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4111_Prokaryotic_N-terminal_methylation_site,_and_PilX_N-terminal


id: CL:4131
description: Mixed, incl. Tetratricopeptide repeat, and EamA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4131_Mixed,_incl._Tetratricopeptide_repeat,_and_EamA_domain


id: CL:4143
description: Mixed, incl. Cytidylate kinase-like family, and PrkA AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4143_Mixed,_incl._Cytidylate_kinase-like_family,_and_PrkA_AAA_domain


id: CL:4145
description: Mixed, incl. Cytidylate kinase-like family, and PrkA AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4145_Mixed,_incl._Cytidylate_kinase-like_family,_and_PrkA_AAA_domain


id: CL:4147
description: Mixed, incl. PrkA AAA domain, and Phosphatidylserine decarboxylase
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4147_Mixed,_incl._PrkA_AAA_domain,_and_Phosphatidylserine_decarboxylase


id: CL:4149
description: PrkA AAA domain, and Von Willebrand factor A-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4149_PrkA_AAA_domain,_and_Von_Willebrand_factor_A-like_domain_superfamily


id: CL:4161
description: Mixed, incl. Phosphatidylserine decarboxylase, and DksA, N-terminal domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4161_Mixed,_incl._Phosphatidylserine_decarboxylase,_and_DksA,_N-terminal_domain_superfamily


id: CL:4173
description: Cytidylate kinase-like family, and Response to pH
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4173_Cytidylate_kinase-like_family,_and_Response_to_pH


id: CL:4191
description: Mixed, incl. Aspartic-type peptidase activity, and Putative Se/S carrier protein-like
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4191_Mixed,_incl._Aspartic-type_peptidase_activity,_and_Putative_Se/S_carrier_protein-like


id: CL:4202
description: Mostly uncharacterized, incl. Secondary metabolic process, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4202_Mostly_uncharacterized,_incl._Secondary_metabolic_process,_and_Periplasmic_binding_protein


id: CL:4203
description: Mostly uncharacterized, incl. Secondary metabolic process, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4203_Mostly_uncharacterized,_incl._Secondary_metabolic_process,_and_Periplasmic_binding_protein


id: CL:4204
description: Mostly uncharacterized, incl. Amidohydrolase, and HesB-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4204_Mostly_uncharacterized,_incl._Amidohydrolase,_and_HesB-like_domain_superfamily


id: CL:4205
description: Mixed, incl. Amidohydrolase, and HesB-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4205_Mixed,_incl._Amidohydrolase,_and_HesB-like_domain_superfamily


id: CL:4208
description: Amidohydrolase, and 4Fe-4S single cluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4208_Amidohydrolase,_and_4Fe-4S_single_cluster_domain


id: CL:4223
description: Mixed, incl. HesB-like domain superfamily, and Class I glutamine amidotransferase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4223_Mixed,_incl._HesB-like_domain_superfamily,_and_Class_I_glutamine_amidotransferase-like


id: CL:4236
description: Mixed, incl. Caspase domain, and Tetratricopeptide repeat 1
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4236_Mixed,_incl._Caspase_domain,_and_Tetratricopeptide_repeat_1


id: CL:4245
description: Mixed, incl. Periplasmic binding protein, and Esterase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4245_Mixed,_incl._Periplasmic_binding_protein,_and_Esterase-like


id: CL:4246
description: Mixed, incl. Periplasmic binding protein, and ABC transporter, permease protein, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4246_Mixed,_incl._Periplasmic_binding_protein,_and_ABC_transporter,_permease_protein,_BtuC-like


id: CL:425
description: Mixed, incl. GTP binding domain, and RNA pseudouridylate synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:425_Mixed,_incl._GTP_binding_domain,_and_RNA_pseudouridylate_synthase


id: CL:4250
description: Periplasmic binding protein, and ABC transporter, permease protein, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4250_Periplasmic_binding_protein,_and_ABC_transporter,_permease_protein,_BtuC-like


id: CL:4269
description: Esterase-like, and Siderophore metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4269_Esterase-like,_and_Siderophore_metabolic_process


id: CL:427
description: Mixed, incl. 50S ribosomal protein L30e-like, and Pseudouridine synthase, RluC/RluD
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:427_Mixed,_incl._50S_ribosomal_protein_L30e-like,_and_Pseudouridine_synthase,_RluC/RluD


id: CL:4278
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4278_Mostly_uncharacterized,_incl._Sulfur_compound_transmembrane_transporter_activity,_and_Tim44-like_domain

description:
  Mostly uncharacterized, incl. Sulfur compound transmembrane transporter activity, and Tim44-like domain


id: CL:4279
description: Mixed, incl. Sulfur compound transmembrane transporter activity, and Tim44-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4279_Mixed,_incl._Sulfur_compound_transmembrane_transporter_activity,_and_Tim44-like_domain


id: CL:4280
description: Mixed, incl. Sulfur compound transmembrane transporter activity, and Tim44-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4280_Mixed,_incl._Sulfur_compound_transmembrane_transporter_activity,_and_Tim44-like_domain


id: CL:4291
description: Mixed, incl. Lipid degradation, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4291_Mixed,_incl._Lipid_degradation,_and_Tetratricopeptide_repeat


id: CL:4300
description: Mixed, incl. Coenzyme F420 binding, and Vitamin catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4300_Mixed,_incl._Coenzyme_F420_binding,_and_Vitamin_catabolic_process


id: CL:4314
description: Mixed, incl. RuvA domain 2-like, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4314_Mixed,_incl._RuvA_domain_2-like,_and_Signal


id: CL:4332
description: Mixed, incl. Carboxymuconolactone decarboxylase-like, and Sugar transporter, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4332_Mixed,_incl._Carboxymuconolactone_decarboxylase-like,_and_Sugar_transporter,_conserved_site


id: CL:4334
description: Mixed, incl. Histone deacetylase domain, and Carboxymuconolactone decarboxylase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4334_Mixed,_incl._Histone_deacetylase_domain,_and_Carboxymuconolactone_decarboxylase-like


id: CL:4348
description: Mixed, incl. Sugar transporter, conserved site, and Nucleobase transport
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4348_Mixed,_incl._Sugar_transporter,_conserved_site,_and_Nucleobase_transport


id: CL:4358
description: Mixed, incl. Heme metabolic process, and Tricarboxylic acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4358_Mixed,_incl._Heme_metabolic_process,_and_Tricarboxylic_acid_biosynthetic_process


id: CL:4360
description: Mixed, incl. Heme metabolic process, and Tricarboxylic acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4360_Mixed,_incl._Heme_metabolic_process,_and_Tricarboxylic_acid_biosynthetic_process


id: CL:4361
description: Mixed, incl. Porphyrin biosynthesis, and Cytochrome complex assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4361_Mixed,_incl._Porphyrin_biosynthesis,_and_Cytochrome_complex_assembly


id: CL:4363
description: Mixed, incl. Porphyrin biosynthesis, and Cytochrome c assembly protein
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4363_Mixed,_incl._Porphyrin_biosynthesis,_and_Cytochrome_c_assembly_protein


id: CL:4389
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4389_Mixed,_incl._Pyridoxamine-phosphate_oxidase_activity,_and_HicB-like_antitoxin_of_toxin-antitoxin_system

description:
  Mixed, incl. Pyridoxamine-phosphate oxidase activity, and HicB-like antitoxin of toxin-antitoxin system


id: CL:4399
description: Coenzyme PQQ synthesis protein E-like, and Siroheme decarboxylase , AsnC-like ligand binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4399_Coenzyme_PQQ_synthesis_protein_E-like,_and_Siroheme_decarboxylase_,_AsnC-like_ligand_binding_domain


id: CL:4417
description: Mixed, incl. Choline catabolic process, and Copper ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4417_Mixed,_incl._Choline_catabolic_process,_and_Copper_ion_binding


id: CL:4419
description: Choline catabolic process, and Protein of unknown function DUF6765
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4419_Choline_catabolic_process,_and_Protein_of_unknown_function_DUF6765


id: CL:4442
description: Mixed, incl. Deaminase MtaD/DadD, and Amino acid salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4442_Mixed,_incl._Deaminase_MtaD/DadD,_and_Amino_acid_salvage


id: CL:4443
description: Mostly uncharacterized, incl. Tetrapyrrole methylase, and DEDD transposase family
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4443_Mostly_uncharacterized,_incl._Tetrapyrrole_methylase,_and_DEDD_transposase_family


id: CL:4445
description: Mixed, incl. GIY-YIG endonuclease superfamily, and impB/mucB/samB family C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4445_Mixed,_incl._GIY-YIG_endonuclease_superfamily,_and_impB/mucB/samB_family_C-terminal_domain


id: CL:4466
description: Deaminase MtaD/DadD, and Amino acid salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4466_Deaminase_MtaD/DadD,_and_Amino_acid_salvage


id: CL:447
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:447_Mixed,_incl._Protein_carrier_chaperone,_and_GTP-binding_protein_TrmE/Aminomethyltransferase_GcvT,_domain_1

description:
  Mixed, incl. Protein carrier chaperone, and GTP-binding protein TrmE/Aminomethyltransferase GcvT, domain 1


id: CL:4481
description: Mixed, incl. Menaquinone biosynthesis, and Ubiquinone and other terpenoid-quinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4481_Mixed,_incl._Menaquinone_biosynthesis,_and_Ubiquinone_and_other_terpenoid-quinone_biosynthesis


id: CL:4482
description: Mixed, incl. Menaquinone biosynthesis, and Methyltransferase type 11
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4482_Mixed,_incl._Menaquinone_biosynthesis,_and_Methyltransferase_type_11


id: CL:4483
description: Mixed, incl. Menaquinone biosynthesis, and Methyltransferase type 11
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4483_Mixed,_incl._Menaquinone_biosynthesis,_and_Methyltransferase_type_11


id: CL:4484
description: Mixed, incl. Menaquinone biosynthesis, and Methyltransferase type 11
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4484_Mixed,_incl._Menaquinone_biosynthesis,_and_Methyltransferase_type_11


id: CL:4487
description: Menaquinone biosynthesis, and Enolase-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4487_Menaquinone_biosynthesis,_and_Enolase-like,_N-terminal


id: CL:4507
description: Mixed, incl. Tryptophanase activity, and Capsule synthesis protein, CapA
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4507_Mixed,_incl._Tryptophanase_activity,_and_Capsule_synthesis_protein,_CapA


id: CL:4523
description: Mixed, incl. O-methyltransferase domain, and Peptidase M48, protease HtpX, putative
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4523_Mixed,_incl._O-methyltransferase_domain,_and_Peptidase_M48,_protease_HtpX,_putative


id: CL:4532
description: Mostly uncharacterized, incl. Amine oxidase, and SnoaL-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4532_Mostly_uncharacterized,_incl._Amine_oxidase,_and_SnoaL-like_domain


id: CL:4534
description: Mixed, incl. Amine oxidase, and SnoaL-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4534_Mixed,_incl._Amine_oxidase,_and_SnoaL-like_domain


id: CL:4548
description: Mixed, incl. Flavodoxin-like fold, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4548_Mixed,_incl._Flavodoxin-like_fold,_and_Methyltransferase_domain


id: CL:4560
description: Mixed, incl. Peptidyl-serine modification, and Lipid degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4560_Mixed,_incl._Peptidyl-serine_modification,_and_Lipid_degradation


id: CL:4577
description: Mixed, incl. Peptidase M48, protease HtpX, putative, and Recombinational repair
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4577_Mixed,_incl._Peptidase_M48,_protease_HtpX,_putative,_and_Recombinational_repair


id: CL:4591
description: Mixed, incl. Organic hydroxy compound biosynthetic process, and TatD related DNase
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4591_Mixed,_incl._Organic_hydroxy_compound_biosynthetic_process,_and_TatD_related_DNase


id: CL:4592
description: Mixed, incl. Organic hydroxy compound biosynthetic process, and TatD related DNase
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4592_Mixed,_incl._Organic_hydroxy_compound_biosynthetic_process,_and_TatD_related_DNase


id: CL:4593
description: Thiamine biosynthetic process, and Aldehyde biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4593_Thiamine_biosynthetic_process,_and_Aldehyde_biosynthetic_process


id: CL:4594
description: Thiamine biosynthetic process, and Biotin synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4594_Thiamine_biosynthetic_process,_and_Biotin_synthase_activity


id: CL:4596
description: Thiamine diphosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4596_Thiamine_diphosphate_metabolic_process


id: CL:460
description: Protein export, and Queuosine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:460_Protein_export,_and_Queuosine_biosynthesis


id: CL:4626
description: Mixed, incl. TatD related DNase, and Cache domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4626_Mixed,_incl._TatD_related_DNase,_and_Cache_domain


id: CL:4639
description: Mixed, incl. Outer membrane lipoprotein Slp, and SagB-type dehydrogenase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4639_Mixed,_incl._Outer_membrane_lipoprotein_Slp,_and_SagB-type_dehydrogenase_domain


id: CL:4650
description: Mixed, incl. PDZ domain, and Transposase, IS4-like
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4650_Mixed,_incl._PDZ_domain,_and_Transposase,_IS4-like


id: CL:4651
description: Mixed, incl. Transposase, IS4-like, and Tail specific protease
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4651_Mixed,_incl._Transposase,_IS4-like,_and_Tail_specific_protease


id: CL:4653
description: Mixed, incl. Tail specific protease, and Glycogen debranching enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4653_Mixed,_incl._Tail_specific_protease,_and_Glycogen_debranching_enzyme


id: CL:466
description: SRP54-type protein, helical bundle domain, and Protein-transporting ATPase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:466_SRP54-type_protein,_helical_bundle_domain,_and_Protein-transporting_ATPase_activity


id: CL:4668
description: Mixed, incl. Transposase, IS4-like, and N-6 DNA Methylase
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4668_Mixed,_incl._Transposase,_IS4-like,_and_N-6_DNA_Methylase


id: CL:4680
description: Mixed, incl. PDZ domain, and acyl-CoA hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4680_Mixed,_incl._PDZ_domain,_and_acyl-CoA_hydrolase_activity


id: CL:4682
description: Mixed, incl. Peptidase S1C, Do, and acyl-CoA hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4682_Mixed,_incl._Peptidase_S1C,_Do,_and_acyl-CoA_hydrolase_activity


id: CL:4696
description: Mixed, incl. Tail specific protease, and SPOR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4696_Mixed,_incl._Tail_specific_protease,_and_SPOR_domain


id: CL:4707
description: Mixed, incl. DGC domain, and Predicted permease
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4707_Mixed,_incl._DGC_domain,_and_Predicted_permease


id: CL:4709
description: Mixed, incl. DGC domain, and Protein lipoylation
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4709_Mixed,_incl._DGC_domain,_and_Protein_lipoylation


id: CL:4711
description: Mixed, incl. DGC domain, and Protein lipoylation
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4711_Mixed,_incl._DGC_domain,_and_Protein_lipoylation


id: CL:4744
description: Mixed, incl. ABC transporters, and beta-Lactam resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4744_Mixed,_incl._ABC_transporters,_and_beta-Lactam_resistance


id: CL:4745
description: Mixed, incl. ABC transporters, and beta-Lactam resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4745_Mixed,_incl._ABC_transporters,_and_beta-Lactam_resistance


id: CL:4746
description: Mixed, incl. Lipid transport, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4746_Mixed,_incl._Lipid_transport,_and_ABC-2_family_transporter_protein


id: CL:4747
description: Mixed, incl. Lipid transport, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4747_Mixed,_incl._Lipid_transport,_and_ABC-2_family_transporter_protein


id: CL:4748
description: Mixed, incl. Mtb iron assimilation by chelation, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4748_Mixed,_incl._Mtb_iron_assimilation_by_chelation,_and_ABC-2_family_transporter_protein


id: CL:4749
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4749_Mixed,_incl._Mtb_iron_assimilation_by_chelation,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal

description:
  Mixed, incl. Mtb iron assimilation by chelation, and Oligopeptide/dipeptide ABC transporter, C-terminal


id: CL:4750
description: Mtb iron assimilation by chelation, and Histone deacetylase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4750_Mtb_iron_assimilation_by_chelation,_and_Histone_deacetylase_domain


id: CL:4761
description: Oligopeptide/dipeptide ABC transporter, C-terminal, and MetI-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4761_Oligopeptide/dipeptide_ABC_transporter,_C-terminal,_and_MetI-like_superfamily


id: CL:4772
description: ABC-2 family transporter protein, and Cation efflux system protein CusB, domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4772_ABC-2_family_transporter_protein,_and_Cation_efflux_system_protein_CusB,_domain_1


id: CL:4787
description: Mixed, incl. Phospholipid transport, and ER-Phagosome pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4787_Mixed,_incl._Phospholipid_transport,_and_ER-Phagosome_pathway


id: CL:4789
description: Phospholipid transport, and ER-Phagosome pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4789_Phospholipid_transport,_and_ER-Phagosome_pathway


id: CL:4818
description: Mixed, incl. NqrDE/RnfAE, and Electron transport
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4818_Mixed,_incl._NqrDE/RnfAE,_and_Electron_transport


id: CL:4819
description: Mixed, incl. Protein MJ0674-like, and WD40/YVTN repeat-like-containing domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4819_Mixed,_incl._Protein_MJ0674-like,_and_WD40/YVTN_repeat-like-containing_domain_superfamily


id: CL:4836
description: NqrDE/RnfAE, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4836_NqrDE/RnfAE,_and_4Fe-4S_dicluster_domain


id: CL:4847
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4847_Mixed,_incl._Efflux_transmembrane_transporter_activity,_and_RND_efflux_pump,_membrane_fusion_protein

description:
  Mixed, incl. Efflux transmembrane transporter activity, and RND efflux pump, membrane fusion protein


id: CL:4849
description: Efflux transmembrane transporter activity, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4849_Efflux_transmembrane_transporter_activity,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:4850
description: Efflux transmembrane transporter activity, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4850_Efflux_transmembrane_transporter_activity,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:4852
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4852_Efflux_transmembrane_transporter_activity,_and_Barrel-sandwich_domain_of_CusB_or_HlyD_membrane-fusion

description:
  Efflux transmembrane transporter activity, and Barrel-sandwich domain of CusB or HlyD membrane-fusion


id: CL:4854
description: Palmitate, and Hydrophobe/amphiphile efflux-1 HAE1
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4854_Palmitate,_and_Hydrophobe/amphiphile_efflux-1_HAE1


id: CL:4879
description: Mixed, incl. Palmitate, and HlyD family secretion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4879_Mixed,_incl._Palmitate,_and_HlyD_family_secretion_protein


id: CL:4894
description: ABC3 transporter permease protein domain, and Transposase IS200 like
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4894_ABC3_transporter_permease_protein_domain,_and_Transposase_IS200_like


id: CL:4914
description: Mixed, incl. NosL, and Cobalt ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4914_Mixed,_incl._NosL,_and_Cobalt_ion_binding


id: CL:4916
description: Mixed, incl. NosL, and ABC transporter, lipoprotein release, LolD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4916_Mixed,_incl._NosL,_and_ABC_transporter,_lipoprotein_release,_LolD-like


id: CL:494
description: Queuosine biosynthesis, and LexA/Signal peptidase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:494_Queuosine_biosynthesis,_and_LexA/Signal_peptidase-like_superfamily


id: CL:4942
description: Mixed, incl. VWA domain containing CoxE-like protein, and ATPase, AAA-type, core
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4942_Mixed,_incl._VWA_domain_containing_CoxE-like_protein,_and_ATPase,_AAA-type,_core


id: CL:4943
description: Mostly uncharacterized, incl. Cation efflux family, and Lipoprotein localization to membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4943_Mostly_uncharacterized,_incl._Cation_efflux_family,_and_Lipoprotein_localization_to_membrane


id: CL:4945
description: Mixed, incl. Lipoprotein localization to membrane, and ABC-2 type transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4945_Mixed,_incl._Lipoprotein_localization_to_membrane,_and_ABC-2_type_transporter


id: CL:4965
description: VWA domain containing CoxE-like protein, and ATPase, AAA-type, core
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4965_VWA_domain_containing_CoxE-like_protein,_and_ATPase,_AAA-type,_core


id: CL:4983
description: Mixed, incl. Nickel cation binding, and Transition metal ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4983_Mixed,_incl._Nickel_cation_binding,_and_Transition_metal_ion_transport


id: CL:4984
description: Mixed, incl. Protein maturation, and Rare lipoprotein A
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4984_Mixed,_incl._Protein_maturation,_and_Rare_lipoprotein_A


id: CL:4986
description: Protein maturation, and Ferredoxin hydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4986_Protein_maturation,_and_Ferredoxin_hydrogenase_activity


id: CL:4988
description: ATPase complex, and Protein maturation
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:4988_ATPase_complex,_and_Protein_maturation


id: CL:5015
description: Mixed, incl. Cobalt ion transport, and Nickel cation binding
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5015_Mixed,_incl._Cobalt_ion_transport,_and_Nickel_cation_binding


id: CL:5017
description: Cobalt ion transport, and Long-chain fatty acid transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5017_Cobalt_ion_transport,_and_Long-chain_fatty_acid_transporter_activity


id: CL:503
description: Mixed, incl. DNA topoisomerase, type IIA-like domain superfamily, and RNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:503_Mixed,_incl._DNA_topoisomerase,_type_IIA-like_domain_superfamily,_and_RNA_ligase_activity


id: CL:5033
description: Mixed, incl. Response to nickel cation, and 3-oxoacyl-[acyl-carrier-protein] synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5033_Mixed,_incl._Response_to_nickel_cation,_and_3-oxoacyl-[acyl-carrier-protein]_synthase_activity


id: CL:5044
description: Mostly uncharacterized, incl. CobQ/CobB/MinD/ParA nucleotide binding domain, and Nitrogen fixation
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5044_Mostly_uncharacterized,_incl._CobQ/CobB/MinD/ParA_nucleotide_binding_domain,_and_Nitrogen_fixation


id: CL:5045
description: Mixed, incl. CobQ/CobB/MinD/ParA nucleotide binding domain, and Nitrogen fixation
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5045_Mixed,_incl._CobQ/CobB/MinD/ParA_nucleotide_binding_domain,_and_Nitrogen_fixation


id: CL:5048
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5048_Mixed,_incl._CobQ/CobB/MinD/ParA_nucleotide_binding_domain,_and_Damage-control_phosphatase_PH1575-like

description:
  Mixed, incl. CobQ/CobB/MinD/ParA nucleotide binding domain, and Damage-control phosphatase PH1575-like


id: CL:5050
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5050_Mixed,_incl._CobQ/CobB/MinD/ParA_nucleotide_binding_domain,_and_Dinitrogenase_iron-molybdenum_cofactor

description:
  Mixed, incl. CobQ/CobB/MinD/ParA nucleotide binding domain, and Dinitrogenase iron-molybdenum cofactor


id: CL:5053
description: CobQ/CobB/MinD/ParA nucleotide binding domain, and Dinitrogenase iron-molybdenum cofactor
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5053_CobQ/CobB/MinD/ParA_nucleotide_binding_domain,_and_Dinitrogenase_iron-molybdenum_cofactor


id: CL:5072
description: Mixed, incl. Dimerisation domain of Zinc Transporter, and YaeB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5072_Mixed,_incl._Dimerisation_domain_of_Zinc_Transporter,_and_YaeB-like


id: CL:5095
description: Mixed, incl. Flavodoxin/nitric oxide synthase, and Peptidase M20
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5095_Mixed,_incl._Flavodoxin/nitric_oxide_synthase,_and_Peptidase_M20


id: CL:5097
description: Mixed, incl. FecCD transport family, and Transition metal ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5097_Mixed,_incl._FecCD_transport_family,_and_Transition_metal_ion_transport


id: CL:5113
description: Flavodoxin/nitric oxide synthase, and SNARE associated Golgi protein
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5113_Flavodoxin/nitric_oxide_synthase,_and_SNARE_associated_Golgi_protein


id: CL:5124
description: Mixed, incl. Integrase, catalytic domain, and ApbE-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5124_Mixed,_incl._Integrase,_catalytic_domain,_and_ApbE-like_superfamily


id: CL:5126
description: Mixed, incl. ApbE-like superfamily, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5126_Mixed,_incl._ApbE-like_superfamily,_and_4Fe-4S_binding_domain


id: CL:514
description: Mixed, incl. Transcription, DNA-templated, and Cyclic nucleotide-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:514_Mixed,_incl._Transcription,_DNA-templated,_and_Cyclic_nucleotide-binding_domain


id: CL:5142
description: Mixed, incl. Integrase, catalytic domain, and protein-DNA covalent cross-linking
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5142_Mixed,_incl._Integrase,_catalytic_domain,_and_protein-DNA_covalent_cross-linking


id: CL:515
description: Mixed, incl. Transcription, DNA-templated, and Cyclic nucleotide-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:515_Mixed,_incl._Transcription,_DNA-templated,_and_Cyclic_nucleotide-binding_domain


id: CL:5155
description: Mixed, incl. Nitrogen fixation, and Nitrogen regulatory protein PII
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5155_Mixed,_incl._Nitrogen_fixation,_and_Nitrogen_regulatory_protein_PII


id: CL:5156
description: Mixed, incl. Nitrogen fixation, and Nitrogen regulatory protein PII
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5156_Mixed,_incl._Nitrogen_fixation,_and_Nitrogen_regulatory_protein_PII


id: CL:5157
description: Mixed, incl. Nitrogen fixation, and Nitrogen regulatory protein PII
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5157_Mixed,_incl._Nitrogen_fixation,_and_Nitrogen_regulatory_protein_PII


id: CL:5158
description: Nitrogen fixation, and Nitrogen regulatory protein PII
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5158_Nitrogen_fixation,_and_Nitrogen_regulatory_protein_PII


id: CL:5161
description: Nitrogen fixation, and Nitrogen regulatory protein PII
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5161_Nitrogen_fixation,_and_Nitrogen_regulatory_protein_PII


id: CL:518
description: RNA polymerase, and SNF2, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:518_RNA_polymerase,_and_SNF2,_N-terminal


id: CL:5188
description: Mixed, incl. 4Fe-4S dicluster domain, and Transmembrane protein TMEM64
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5188_Mixed,_incl._4Fe-4S_dicluster_domain,_and_Transmembrane_protein_TMEM64


id: CL:5197
description: Mixed, incl. Nucleotidyl transferase AbiEii toxin, Type IV TA system
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5197_Mixed,_incl._Nucleotidyl_transferase_AbiEii_toxin,_Type_IV_TA_system


id: CL:5206
description: Mixed, incl. Spermidine metabolic process, and Purine-nucleoside phosphorylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5206_Mixed,_incl._Spermidine_metabolic_process,_and_Purine-nucleoside_phosphorylase_activity


id: CL:5216
description: Mixed, incl. Putative glucoamylase, and Galactose-binding-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5216_Mixed,_incl._Putative_glucoamylase,_and_Galactose-binding-like_domain_superfamily


id: CL:5232
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5232_Mostly_uncharacterized,_incl._Methylaspartate_mutase_activity,_and_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity

description:
  Mostly uncharacterized, incl. Methylaspartate mutase activity, and cob(I)yrinic acid a,c-diamide adenosyltransferase activity


id: CL:5234
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5234_Mixed,_incl._Methylaspartate_mutase_activity,_and_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity

description:
  Mixed, incl. Methylaspartate mutase activity, and cob(I)yrinic acid a,c-diamide adenosyltransferase activity


id: CL:5236
description: Methylaspartate mutase activity, and Flavin reductase like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5236_Methylaspartate_mutase_activity,_and_Flavin_reductase_like_domain


id: CL:5262
description: Mostly uncharacterized, incl. Sulfur compound catabolic process, and Calcium
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5262_Mostly_uncharacterized,_incl._Sulfur_compound_catabolic_process,_and_Calcium


id: CL:5264
description: Mixed, incl. Sulfur compound catabolic process, and Calcium
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5264_Mixed,_incl._Sulfur_compound_catabolic_process,_and_Calcium


id: CL:5283
description: Mixed, incl. RNA methyltransferase activity, and TraB/PrgY/GumN family
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5283_Mixed,_incl._RNA_methyltransferase_activity,_and_TraB/PrgY/GumN_family


id: CL:5285
description: Mixed, incl. TraB/PrgY/GumN family, and Lipoprotein Flpp3-like
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5285_Mixed,_incl._TraB/PrgY/GumN_family,_and_Lipoprotein_Flpp3-like


id: CL:5297
description: Mixed, incl. Phenazine biosynthesis, and Flavin reductase like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5297_Mixed,_incl._Phenazine_biosynthesis,_and_Flavin_reductase_like_domain


id: CL:5306
description: Mixed, incl. Winged helix DNA-binding domain superfamily, and Secondary metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5306_Mixed,_incl._Winged_helix_DNA-binding_domain_superfamily,_and_Secondary_metabolic_process


id: CL:5307
description: Mixed, incl. Secondary metabolic process, and Winged helix DNA-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5307_Mixed,_incl._Secondary_metabolic_process,_and_Winged_helix_DNA-binding_domain_superfamily


id: CL:5309
description: Mixed, incl. Secondary metabolic process, and Nitrotoluene catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5309_Mixed,_incl._Secondary_metabolic_process,_and_Nitrotoluene_catabolic_process


id: CL:5311
description: Mixed, incl. Nitrotoluene catabolic process, and HAD-hyrolase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5311_Mixed,_incl._Nitrotoluene_catabolic_process,_and_HAD-hyrolase-like


id: CL:5341
description: Mixed, incl. GntR, C-terminal, and Bacterial transcriptional regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5341_Mixed,_incl._GntR,_C-terminal,_and_Bacterial_transcriptional_regulator


id: CL:5343
description: Mixed, incl. GntR, C-terminal, and LysE type translocator
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5343_Mixed,_incl._GntR,_C-terminal,_and_LysE_type_translocator


id: CL:5357
description: YsiA-like protein, C-terminal region, and Solute carrier family 13
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5357_YsiA-like_protein,_C-terminal_region,_and_Solute_carrier_family_13


id: CL:5369
description: Major Facilitator Superfamily, and Rubrerythrin
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5369_Major_Facilitator_Superfamily,_and_Rubrerythrin


id: CL:5384
description: Mixed, incl. Formate metabolic process, and Tryptophanase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5384_Mixed,_incl._Formate_metabolic_process,_and_Tryptophanase_activity


id: CL:5385
description: Mixed, incl. Formate metabolic process, and SpoVT / AbrB like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5385_Mixed,_incl._Formate_metabolic_process,_and_SpoVT_/_AbrB_like_domain


id: CL:5387
description: Mixed, incl. SpoVT / AbrB like domain, and PIN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5387_Mixed,_incl._SpoVT_/_AbrB_like_domain,_and_PIN_domain


id: CL:5399
description: Formate metabolic process, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5399_Formate_metabolic_process,_and_Signal


id: CL:5410
description: Mixed, incl. Tryptophanase activity, and Pyridoxal-phosphate binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5410_Mixed,_incl._Tryptophanase_activity,_and_Pyridoxal-phosphate_binding_site


id: CL:542
description: RNA polymerase sigma-70, and CarD-like/TRCF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:542_RNA_polymerase_sigma-70,_and_CarD-like/TRCF_domain


id: CL:5420
description: Mixed, incl. Flavoprotein-like superfamily, and Butanol dehydrogenase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5420_Mixed,_incl._Flavoprotein-like_superfamily,_and_Butanol_dehydrogenase-like


id: CL:5421
description: Mixed, incl. Butanol dehydrogenase-like, and Aldo/keto reductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5421_Mixed,_incl._Butanol_dehydrogenase-like,_and_Aldo/keto_reductase_family


id: CL:5422
description: Mixed, incl. Butanol dehydrogenase-like, and Aldo/keto reductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5422_Mixed,_incl._Butanol_dehydrogenase-like,_and_Aldo/keto_reductase_family


id: CL:5423
description: Mixed, incl. Butanol dehydrogenase-like, and Aldo/keto reductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5423_Mixed,_incl._Butanol_dehydrogenase-like,_and_Aldo/keto_reductase_family


id: CL:5425
description: Mixed, incl. Aldo/keto reductase family, and Butanol dehydrogenase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5425_Mixed,_incl._Aldo/keto_reductase_family,_and_Butanol_dehydrogenase-like


id: CL:5439
description: Mixed, incl. Multi antimicrobial extrusion protein, and Butanol dehydrogenase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5439_Mixed,_incl._Multi_antimicrobial_extrusion_protein,_and_Butanol_dehydrogenase-like


id: CL:5448
description: Mixed, incl. MORN repeat, and Iron-containing alcohol dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5448_Mixed,_incl._MORN_repeat,_and_Iron-containing_alcohol_dehydrogenase


id: CL:5460
description: Mixed, incl. Serine aminopeptidase, S33, and DnaJ domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5460_Mixed,_incl._Serine_aminopeptidase,_S33,_and_DnaJ_domain


id: CL:5475
description: Mixed, incl. acyl-CoA hydrolase activity, and Response to starvation
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5475_Mixed,_incl._acyl-CoA_hydrolase_activity,_and_Response_to_starvation


id: CL:5491
description: Mostly uncharacterized, incl. RTX calcium-binding nonapeptide repeat, and Export from cell
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5491_Mostly_uncharacterized,_incl._RTX_calcium-binding_nonapeptide_repeat,_and_Export_from_cell


id: CL:5492
description: Mixed, incl. RTX calcium-binding nonapeptide repeat, and Export from cell
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5492_Mixed,_incl._RTX_calcium-binding_nonapeptide_repeat,_and_Export_from_cell


id: CL:5493
description: Mixed, incl. RTX calcium-binding nonapeptide repeat, and Export from cell
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5493_Mixed,_incl._RTX_calcium-binding_nonapeptide_repeat,_and_Export_from_cell


id: CL:5494
description: Mostly uncharacterized, incl. Protein transmembrane transport, and Heme binding
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5494_Mostly_uncharacterized,_incl._Protein_transmembrane_transport,_and_Heme_binding


id: CL:5495
description: Mixed, incl. Protein transmembrane transport, and Heme binding
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5495_Mixed,_incl._Protein_transmembrane_transport,_and_Heme_binding


id: CL:5497
description: Mostly uncharacterized, incl. Domain of unknown function (DUF4157), and Catalase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5497_Mostly_uncharacterized,_incl._Domain_of_unknown_function_(DUF4157),_and_Catalase_superfamily


id: CL:5500
description: Mixed, incl. Domain of unknown function (DUF4157), and IraD/Gp25-like
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5500_Mixed,_incl._Domain_of_unknown_function_(DUF4157),_and_IraD/Gp25-like


id: CL:5504
description: Mixed, incl. IraD/Gp25-like, and Baseplate protein J-like
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5504_Mixed,_incl._IraD/Gp25-like,_and_Baseplate_protein_J-like


id: CL:5507
description: Mixed, incl. IraD/Gp25-like, and LysM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5507_Mixed,_incl._IraD/Gp25-like,_and_LysM_domain


id: CL:5535
description: Catalase superfamily, and Heme binding
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5535_Catalase_superfamily,_and_Heme_binding


id: CL:5550
description: Protein transmembrane transport, and Clp, repeat (R) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5550_Protein_transmembrane_transport,_and_Clp,_repeat_(R)_domain


id: CL:557
description: Mixed, incl. Protein ubiquitination, and TPR repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:557_Mixed,_incl._Protein_ubiquitination,_and_TPR_repeat


id: CL:5584
description: Mostly uncharacterized, incl. PAAR motif, and Baseplate protein J-like
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5584_Mostly_uncharacterized,_incl._PAAR_motif,_and_Baseplate_protein_J-like


id: CL:5586
description: Mostly uncharacterized, incl. PAAR motif, and Baseplate protein J-like
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5586_Mostly_uncharacterized,_incl._PAAR_motif,_and_Baseplate_protein_J-like


id: CL:5588
description: Mixed, incl. PAAR motif, and Baseplate protein J-like
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5588_Mixed,_incl._PAAR_motif,_and_Baseplate_protein_J-like


id: CL:559
description: Mixed, incl. Caspase domain, and Threonyl/alanyl tRNA synthetase, SAD
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:559_Mixed,_incl._Caspase_domain,_and_Threonyl/alanyl_tRNA_synthetase,_SAD


id: CL:5603
description: Mixed, incl. Structural constituent of ribosome, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5603_Mixed,_incl._Structural_constituent_of_ribosome,_and_Coiled_coil


id: CL:5624
description: Mixed, incl. RTX calcium-binding nonapeptide repeat, and FG-GAP repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5624_Mixed,_incl._RTX_calcium-binding_nonapeptide_repeat,_and_FG-GAP_repeat


id: CL:5625
description: Mixed, incl. RTX calcium-binding nonapeptide repeat, and FG-GAP repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5625_Mixed,_incl._RTX_calcium-binding_nonapeptide_repeat,_and_FG-GAP_repeat


id: CL:5628
description: Mixed, incl. RTX calcium-binding nonapeptide repeat, and FG-GAP repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5628_Mixed,_incl._RTX_calcium-binding_nonapeptide_repeat,_and_FG-GAP_repeat


id: CL:5629
description: RTX calcium-binding nonapeptide repeat, and FG-GAP repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5629_RTX_calcium-binding_nonapeptide_repeat,_and_FG-GAP_repeat


id: CL:5630
description: RTX calcium-binding nonapeptide repeat, and Integrin alpha, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5630_RTX_calcium-binding_nonapeptide_repeat,_and_Integrin_alpha,_N-terminal


id: CL:5632
description: RTX calcium-binding nonapeptide repeat, and Integrin alpha, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5632_RTX_calcium-binding_nonapeptide_repeat,_and_Integrin_alpha,_N-terminal


id: CL:5636
description: RTX calcium-binding nonapeptide repeat, and Protein of unknown function DUF3300
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5636_RTX_calcium-binding_nonapeptide_repeat,_and_Protein_of_unknown_function_DUF3300


id: CL:5637
description: RTX calcium-binding nonapeptide repeat, and ABC transporter transmembrane region
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5637_RTX_calcium-binding_nonapeptide_repeat,_and_ABC_transporter_transmembrane_region


id: CL:5648
description: Peptidase M10 serralysin, C-terminal, and Protein of unknown function DUF3300
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5648_Peptidase_M10_serralysin,_C-terminal,_and_Protein_of_unknown_function_DUF3300


id: CL:5674
description: Haemagglutination activity domain, and Surface antigen variable number repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5674_Haemagglutination_activity_domain,_and_Surface_antigen_variable_number_repeat


id: CL:5686
description: Mixed, incl. NodB homology domain, and Putative glucoamylase
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5686_Mixed,_incl._NodB_homology_domain,_and_Putative_glucoamylase


id: CL:5708
description: Mixed, incl. Glycine zipper, and Protein MJ0674-like
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5708_Mixed,_incl._Glycine_zipper,_and_Protein_MJ0674-like


id: CL:5720
description: Mixed, incl. Protein of unknown function DUF1566, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5720_Mixed,_incl._Protein_of_unknown_function_DUF1566,_and_Tetratricopeptide_repeat


id: CL:5722
description: Mixed, incl. Fibronectin type 3 domain, and Peroxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5722_Mixed,_incl._Fibronectin_type_3_domain,_and_Peroxidase


id: CL:5739
description: Mostly uncharacterized, incl. Metalloendopeptidase activity, and Copper ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5739_Mostly_uncharacterized,_incl._Metalloendopeptidase_activity,_and_Copper_ion_binding


id: CL:5740
description: Mixed, incl. Metalloendopeptidase activity, and Copper ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5740_Mixed,_incl._Metalloendopeptidase_activity,_and_Copper_ion_binding


id: CL:5742
description: Mixed, incl. Virulence factor BrkB, and Lipopolysaccharide assembly protein A domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5742_Mixed,_incl._Virulence_factor_BrkB,_and_Lipopolysaccharide_assembly_protein_A_domain


id: CL:5758
description: Mixed, incl. Copper ion binding, and Peptidase family M50
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5758_Mixed,_incl._Copper_ion_binding,_and_Peptidase_family_M50


id: CL:5768
description: Mixed, incl. Integrase, DNA-binding domain, and Single-species biofilm formation
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5768_Mixed,_incl._Integrase,_DNA-binding_domain,_and_Single-species_biofilm_formation


id: CL:5778
description: DNA-binding HTH domain, TetR-type
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5778_DNA-binding_HTH_domain,_TetR-type


id: CL:5788
description: Mixed, incl. Phosphate ion transport, and Inorganic phosphate transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5788_Mixed,_incl._Phosphate_ion_transport,_and_Inorganic_phosphate_transmembrane_transporter_activity


id: CL:5790
description: Mixed, incl. Inorganic phosphate transmembrane transporter activity, and Cell adhesion
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5790_Mixed,_incl._Inorganic_phosphate_transmembrane_transporter_activity,_and_Cell_adhesion


id: CL:5792
description: Inorganic phosphate transmembrane transporter activity, and Cell adhesion
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5792_Inorganic_phosphate_transmembrane_transporter_activity,_and_Cell_adhesion


id: CL:5793
description: Inorganic phosphate transmembrane transporter activity, and Phosphate ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5793_Inorganic_phosphate_transmembrane_transporter_activity,_and_Phosphate_ion_binding


id: CL:5795
description: Phosphate transport, and Phosphate ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5795_Phosphate_transport,_and_Phosphate_ion_binding


id: CL:5812
description: Laminin IV, and Alkaline phosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5812_Laminin_IV,_and_Alkaline_phosphatase


id: CL:5846
description: Mixed, incl. DNA metabolic process, and Toxin-antitoxin complex
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5846_Mixed,_incl._DNA_metabolic_process,_and_Toxin-antitoxin_complex


id: CL:5847
description: Mixed, incl. DNA metabolic process, and Toxin-antitoxin complex
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5847_Mixed,_incl._DNA_metabolic_process,_and_Toxin-antitoxin_complex


id: CL:5848
description: Mixed, incl. Toxin-antitoxin complex, and DNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5848_Mixed,_incl._Toxin-antitoxin_complex,_and_DNA_metabolic_process


id: CL:5849
description: Mixed, incl. Toxin-antitoxin complex, and Catalytic activity, acting on DNA
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5849_Mixed,_incl._Toxin-antitoxin_complex,_and_Catalytic_activity,_acting_on_DNA


id: CL:5850
description: Mixed, incl. Toxin-antitoxin complex, and Catalytic activity, acting on DNA
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5850_Mixed,_incl._Toxin-antitoxin_complex,_and_Catalytic_activity,_acting_on_DNA


id: CL:5851
description: Mixed, incl. Catalytic activity, acting on DNA, and Toxin-antitoxin complex
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5851_Mixed,_incl._Catalytic_activity,_acting_on_DNA,_and_Toxin-antitoxin_complex


id: CL:5852
description: Mixed, incl. DNA modification, and Toxin-antitoxin complex
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5852_Mixed,_incl._DNA_modification,_and_Toxin-antitoxin_complex


id: CL:5853
description: Mixed, incl. DNA modification, and Toxin-antitoxin complex
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5853_Mixed,_incl._DNA_modification,_and_Toxin-antitoxin_complex


id: CL:5854
description: Mixed, incl. DNA modification, and AAA domain, group 14
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5854_Mixed,_incl._DNA_modification,_and_AAA_domain,_group_14


id: CL:5855
description: Mixed, incl. DNA modification, and AAA domain, group 15
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5855_Mixed,_incl._DNA_modification,_and_AAA_domain,_group_15


id: CL:5857
description: DNA modification, and Peptidyl-serine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5857_DNA_modification,_and_Peptidyl-serine_modification


id: CL:586
description: Mixed, incl. Protein folding, and Oxidoreductase activity, acting on a sulfur group of donors
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:586_Mixed,_incl._Protein_folding,_and_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: CL:5860
description: Mixed, incl. Peptidyl-serine modification, and Putative RNA methylase family UPF0020
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5860_Mixed,_incl._Peptidyl-serine_modification,_and_Putative_RNA_methylase_family_UPF0020


id: CL:5874
description: DNA restriction-modification system, and N-6 DNA Methylase
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5874_DNA_restriction-modification_system,_and_N-6_DNA_Methylase


id: CL:588
description: Unfolded protein binding, and Proteolysis involved in protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:588_Unfolded_protein_binding,_and_Proteolysis_involved_in_protein_catabolic_process


id: CL:589
description: Unfolded protein binding, and Lon protease, bacterial
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:589_Unfolded_protein_binding,_and_Lon_protease,_bacterial


id: CL:5896
description: Mixed, incl. AAA domain, group 14, and RecG, C-terminal domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5896_Mixed,_incl._AAA_domain,_group_14,_and_RecG,_C-terminal_domain_superfamily


id: CL:5897
description: AAA domain, group 14, and RecG, C-terminal domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5897_AAA_domain,_group_14,_and_RecG,_C-terminal_domain_superfamily


id: CL:5899
description: Domain of unknown function DUF4143, and Domain of unknown function DUF4062
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5899_Domain_of_unknown_function_DUF4143,_and_Domain_of_unknown_function_DUF4062


id: CL:5919
description: DNA methylation on adenine, and Nucleotide excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5919_DNA_methylation_on_adenine,_and_Nucleotide_excision_repair


id: CL:592
description: Protein folding chaperone, and Chaperone DnaJ, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:592_Protein_folding_chaperone,_and_Chaperone_DnaJ,_C-terminal


id: CL:5934
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5934_Toxin-antitoxin_system,_RelE/ParE_toxin_family,_and_Type_II_toxin-antitoxin_system,_antitoxin_Phd/YefM

description:
  Toxin-antitoxin system, RelE/ParE toxin family, and Type II toxin-antitoxin system, antitoxin Phd/YefM


id: CL:5936
description: Arc-type ribbon-helix-helix, and Toxin-antitoxin system, RelE/ParE toxin family
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5936_Arc-type_ribbon-helix-helix,_and_Toxin-antitoxin_system,_RelE/ParE_toxin_family


id: CL:594
description: DnaJ C terminal domain, and ATPase regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:594_DnaJ_C_terminal_domain,_and_ATPase_regulator_activity


id: CL:5958
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5958_Mixed,_incl._GTP_cyclohydrolase_activity,_and_OB-fold_nucleic_acid_binding_domain,_AA-tRNA_synthetase-type

description:
  Mixed, incl. GTP cyclohydrolase activity, and OB-fold nucleic acid binding domain, AA-tRNA synthetase-type


id: CL:5972
description: Mixed, incl. Transposase activity, and Transposase
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5972_Mixed,_incl._Transposase_activity,_and_Transposase


id: CL:5976
description: Transposase, and DDE transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5976_Transposase,_and_DDE_transposase_sub-family


id: CL:5993
description: Mixed, incl. DEDD transposase family, and protein-DNA covalent cross-linking
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:5993_Mixed,_incl._DEDD_transposase_family,_and_protein-DNA_covalent_cross-linking


id: CL:6014
description: Mixed, incl. Toxin-antitoxin complex, and Polymerase beta, nucleotidyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6014_Mixed,_incl._Toxin-antitoxin_complex,_and_Polymerase_beta,_nucleotidyltransferase


id: CL:6016
description: Mixed, incl. TTHA1013/TTHA0281-like, and Ribosomal RNA adenine dimethylase
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6016_Mixed,_incl._TTHA1013/TTHA0281-like,_and_Ribosomal_RNA_adenine_dimethylase


id: CL:6017
description: Mixed, incl. Ribosomal RNA adenine dimethylase, and Polymerase beta, nucleotidyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6017_Mixed,_incl._Ribosomal_RNA_adenine_dimethylase,_and_Polymerase_beta,_nucleotidyltransferase


id: CL:6020
description: Mixed, incl. Ribosomal RNA adenine dimethylase, and Polymerase beta, nucleotidyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6020_Mixed,_incl._Ribosomal_RNA_adenine_dimethylase,_and_Polymerase_beta,_nucleotidyltransferase


id: CL:6054
description: Regulation of growth, and Methylthiotransferase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6054_Regulation_of_growth,_and_Methylthiotransferase,_conserved_site


id: CL:6069
description: Mixed, incl. Flavodoxin domain, and Response to organic substance
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6069_Mixed,_incl._Flavodoxin_domain,_and_Response_to_organic_substance


id: CL:6081
description: Mixed, incl. Fibronectin type 3 domain, and Lectin
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6081_Mixed,_incl._Fibronectin_type_3_domain,_and_Lectin


id: CL:6091
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6091_Mostly_uncharacterized,_incl._Pyridoxal-phosphate_binding_site,_and_Phenylacetic_acid_degradation-related_domain

description:
  Mostly uncharacterized, incl. Pyridoxal-phosphate binding site, and Phenylacetic acid degradation-related domain


id: CL:6094
description: Mixed, incl. Pyridoxal-phosphate binding site, and Phenylacetic acid degradation-related domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6094_Mixed,_incl._Pyridoxal-phosphate_binding_site,_and_Phenylacetic_acid_degradation-related_domain


id: CL:6105
description: Mixed, incl. Transposase IS200 like, and Ribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6105_Mixed,_incl._Transposase_IS200_like,_and_Ribonuclease_activity


id: CL:6117
description: Mixed, incl. Protein of unknown function (DUF5132), and Ammonia ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6117_Mixed,_incl._Protein_of_unknown_function_(DUF5132),_and_Ammonia_ligase_activity


id: CL:6120
description: Mixed, incl. Protein of unknown function (DUF5132), and Heavy-metal-associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6120_Mixed,_incl._Protein_of_unknown_function_(DUF5132),_and_Heavy-metal-associated_domain


id: CL:6135
description: Mixed, incl. Ammonia ligase activity, and Putative regulatory protein
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6135_Mixed,_incl._Ammonia_ligase_activity,_and_Putative_regulatory_protein


id: CL:6144
description: Mixed, incl. YjbQ-like superfamily, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6144_Mixed,_incl._YjbQ-like_superfamily,_and_Sporulation


id: CL:6147
description: Mixed, incl. Sporulation, and RNA capping
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6147_Mixed,_incl._Sporulation,_and_RNA_capping


id: CL:6150
description: Mixed, incl. Sporulation, and Carboxypeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6150_Mixed,_incl._Sporulation,_and_Carboxypeptidase


id: CL:6177
description: Mostly uncharacterized, incl. ATP hydrolysis activity, and Proteolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6177_Mostly_uncharacterized,_incl._ATP_hydrolysis_activity,_and_Proteolysis


id: CL:6178
description: Mostly uncharacterized, incl. Phage terminase large subunit GpA, ATPase domain, and gpW
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6178_Mostly_uncharacterized,_incl._Phage_terminase_large_subunit_GpA,_ATPase_domain,_and_gpW


id: CL:6180
description: Mostly uncharacterized, incl. Phage terminase large subunit GpA, ATPase domain, and gpW
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6180_Mostly_uncharacterized,_incl._Phage_terminase_large_subunit_GpA,_ATPase_domain,_and_gpW


id: CL:6182
description: Mostly uncharacterized, incl. Phage terminase large subunit GpA, ATPase domain, and gpW
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6182_Mostly_uncharacterized,_incl._Phage_terminase_large_subunit_GpA,_ATPase_domain,_and_gpW


id: CL:6183
description: Mostly uncharacterized, incl. Phage terminase large subunit GpA, ATPase domain, and gpW
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6183_Mostly_uncharacterized,_incl._Phage_terminase_large_subunit_GpA,_ATPase_domain,_and_gpW


id: CL:6184
description: Mostly uncharacterized, incl. Phage terminase large subunit GpA, ATPase domain, and Virion assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6184_Mostly_uncharacterized,_incl._Phage_terminase_large_subunit_GpA,_ATPase_domain,_and_Virion_assembly


id: CL:6187
description: Mostly uncharacterized, incl. Glycosyl hydrolase 108, and Regulation of secondary metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6187_Mostly_uncharacterized,_incl._Glycosyl_hydrolase_108,_and_Regulation_of_secondary_metabolic_process


id: CL:6190
description: Mixed, incl. Glycosyl hydrolase 108, and Regulation of secondary metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6190_Mixed,_incl._Glycosyl_hydrolase_108,_and_Regulation_of_secondary_metabolic_process


id: CL:6212
description: Mixed, incl. Phage terminase large subunit GpA, ATPase domain, and Virion assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6212_Mixed,_incl._Phage_terminase_large_subunit_GpA,_ATPase_domain,_and_Virion_assembly


id: CL:6213
description: Mixed, incl. Phage terminase large subunit GpA, ATPase domain, and Virion assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6213_Mixed,_incl._Phage_terminase_large_subunit_GpA,_ATPase_domain,_and_Virion_assembly


id: CL:6226
description: Mixed, incl. Virion assembly, and Peptidase family S49
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6226_Mixed,_incl._Virion_assembly,_and_Peptidase_family_S49


id: CL:6239
description: Mostly uncharacterized, incl. Glycosyl hydrolase 108, and Regulation of secondary metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6239_Mostly_uncharacterized,_incl._Glycosyl_hydrolase_108,_and_Regulation_of_secondary_metabolic_process


id: CL:6242
description: Mixed, incl. Glycosyl hydrolase 108, and Regulation of secondary metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6242_Mixed,_incl._Glycosyl_hydrolase_108,_and_Regulation_of_secondary_metabolic_process


id: CL:626
description: Proteasome complex, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:626_Proteasome_complex,_and_DNA_integration


id: CL:6278
description: Helix-turn-helix domain, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6278_Helix-turn-helix_domain,_and_Coiled_coil


id: CL:6300
description: Mostly uncharacterized, incl. Macro domain-like, and RuvB-like P-loop domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6300_Mostly_uncharacterized,_incl._Macro_domain-like,_and_RuvB-like_P-loop_domain


id: CL:6302
description: Mixed, incl. Macro domain-like, and RuvB-like P-loop domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6302_Mixed,_incl._Macro_domain-like,_and_RuvB-like_P-loop_domain


id: CL:6324
description: Mixed, incl. Primosome complex, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6324_Mixed,_incl._Primosome_complex,_and_Response_to_virus


id: CL:6325
description: Mixed, incl. IstB-like ATP-binding protein, and Universal stress protein A family
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6325_Mixed,_incl._IstB-like_ATP-binding_protein,_and_Universal_stress_protein_A_family


id: CL:6328
description: IstB-like ATP-binding protein, and DNA strand exchange activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6328_IstB-like_ATP-binding_protein,_and_DNA_strand_exchange_activity


id: CL:6330
description: IstB-like ATP-binding protein, and Helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6330_IstB-like_ATP-binding_protein,_and_Helix-turn-helix_domain


id: CL:6353
description: Mixed, incl. Universal stress protein A family, and Von Willebrand factor, type A
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6353_Mixed,_incl._Universal_stress_protein_A_family,_and_Von_Willebrand_factor,_type_A


id: CL:6355
description: Universal stress protein A family, and Von Willebrand factor, type A
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6355_Universal_stress_protein_A_family,_and_Von_Willebrand_factor,_type_A


id: CL:6375
description: CRISPR-cas system, and DNA primase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6375_CRISPR-cas_system,_and_DNA_primase_activity


id: CL:6379
description: CRISPR-cas system, and Maintenance of DNA repeat elements
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6379_CRISPR-cas_system,_and_Maintenance_of_DNA_repeat_elements


id: CL:6399
description: Mostly uncharacterized, incl. ELP3/YhcC, and CHC2 zinc finger
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6399_Mostly_uncharacterized,_incl._ELP3/YhcC,_and_CHC2_zinc_finger


id: CL:640
description: Protein-disulfide reductase activity, and Thioredoxin-like fold
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:640_Protein-disulfide_reductase_activity,_and_Thioredoxin-like_fold


id: CL:6401
description: Mixed, incl. ATPase regulator activity, and Redoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6401_Mixed,_incl._ATPase_regulator_activity,_and_Redoxin


id: CL:6415
description: Mixed, incl. CHC2 zinc finger, and VKOR domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6415_Mixed,_incl._CHC2_zinc_finger,_and_VKOR_domain_superfamily


id: CL:642
description: Thioredoxin-like domain, and Protein-disulfide reductase (NAD(P)) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:642_Thioredoxin-like_domain,_and_Protein-disulfide_reductase_(NAD(P))_activity


id: CL:6426
description: Mixed, incl. Regulation of cell cycle, and ATP binding protein MinD/FleN
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6426_Mixed,_incl._Regulation_of_cell_cycle,_and_ATP_binding_protein_MinD/FleN


id: CL:6428
description: Mixed, incl. Ribonuclease H superfamily, and Homeobox-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6428_Mixed,_incl._Ribonuclease_H_superfamily,_and_Homeobox-like_domain_superfamily


id: CL:6443
description: Regulation of cell cycle, and ATP binding protein MinD/FleN
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6443_Regulation_of_cell_cycle,_and_ATP_binding_protein_MinD/FleN


id: CL:6473
description: Mixed, incl. YaeB-like, and Fido domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6473_Mixed,_incl._YaeB-like,_and_Fido_domain


id: CL:6483
description: YaeB-like, and Formylmethanofuran dehydrogenase, subunit E domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6483_YaeB-like,_and_Formylmethanofuran_dehydrogenase,_subunit_E_domain


id: CL:6500
description: Mixed, incl. Transposase IS66, C-terminal, and IS66 Orf2 like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6500_Mixed,_incl._Transposase_IS66,_C-terminal,_and_IS66_Orf2_like_protein


id: CL:6502
description: Transposase IS66, C-terminal, and IS66 Orf2 like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6502_Transposase_IS66,_C-terminal,_and_IS66_Orf2_like_protein


id: CL:6552
description: Mixed, incl. Transposase IS200 like, and Histidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:6552_Mixed,_incl._Transposase_IS200_like,_and_Histidine_metabolism


id: CL:658
description: Disulfide bond, and VKOR domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:658_Disulfide_bond,_and_VKOR_domain_superfamily


id: CL:673
description: DNA repair, and DNA repair complex
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:673_DNA_repair,_and_DNA_repair_complex


id: CL:674
description: DNA repair complex, and Damaged DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:674_DNA_repair_complex,_and_Damaged_DNA_binding


id: CL:675
description: Mixed, incl. SOS response, and Mismatch repair
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:675_Mixed,_incl._SOS_response,_and_Mismatch_repair


id: CL:677
description: Mixed, incl. Mismatch repair, and DExx box DNA helicase domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:677_Mixed,_incl._Mismatch_repair,_and_DExx_box_DNA_helicase_domain_superfamily


id: CL:701
description: DNA repair complex, and HRDC domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:701_DNA_repair_complex,_and_HRDC_domain


id: CL:716
description: DNA-(apurinic or apyrimidinic site) endonuclease activity, and 3-5 exonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:716_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity,_and_3-5_exonuclease


id: CL:735
description: DNA replication, and 5-3 exonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:735_DNA_replication,_and_5-3_exonuclease_activity


id: CL:737
description: RNA-DNA hybrid ribonuclease activity, and 5-3 exonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:737_RNA-DNA_hybrid_ribonuclease_activity,_and_5-3_exonuclease_activity


id: CL:755
description: DNA polymerase complex, and DNA-directed DNA polymerase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:755_DNA_polymerase_complex,_and_DNA-directed_DNA_polymerase_activity


id: CL:768
description: Mixed, incl. Horizontal gene transfer, and MPN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:768_Mixed,_incl._Horizontal_gene_transfer,_and_MPN_domain


id: CL:779
description: Exodeoxyribonuclease V complex, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:779_Exodeoxyribonuclease_V_complex,_and_AAA_domain


id: CL:790
description: Mixed, incl. RecF/RecN/SMC, N-terminal, and tRNA synthetases class I (W and Y)
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:790_Mixed,_incl._RecF/RecN/SMC,_N-terminal,_and_tRNA_synthetases_class_I_(W_and_Y)


id: CL:804
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:804_Mixed,_incl._Phospholipid_metabolic_process,_and_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Mixed, incl. Phospholipid metabolic process, and Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: CL:805
description: Mixed, incl. Isoprenoid metabolic process, and Glycerophospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:805_Mixed,_incl._Isoprenoid_metabolic_process,_and_Glycerophospholipid_metabolism


id: CL:806
description: Mixed, incl. Glycerophospholipid metabolism, and NodB homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:806_Mixed,_incl._Glycerophospholipid_metabolism,_and_NodB_homology_domain


id: CL:809
description: Mixed, incl. PDZ domain 6, and CTP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:809_Mixed,_incl._PDZ_domain_6,_and_CTP_metabolic_process


id: CL:826
description: CDP-alcohol phosphatidyltransferase, and Glycerolipid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:826_CDP-alcohol_phosphatidyltransferase,_and_Glycerolipid_biosynthetic_process


id: CL:839
description: Isoprene biosynthesis, and DNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:839_Isoprene_biosynthesis,_and_DNA_catabolic_process


id: CL:864
description: Mixed, incl. rRNA catabolic process, and Peptidyl-aspartic acid modification
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:864_Mixed,_incl._rRNA_catabolic_process,_and_Peptidyl-aspartic_acid_modification


id: CL:875
description: Histone-like DNA-binding protein, and Cold shock, CspA
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:875_Histone-like_DNA-binding_protein,_and_Cold_shock,_CspA


id: CL:895
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:895_Mixed,_incl._Cellular_amino_acid_biosynthetic_process,_and_Nucleoside_monophosphate_biosynthetic_process

description:
  Mixed, incl. Cellular amino acid biosynthetic process, and Nucleoside monophosphate biosynthetic process


id: CL:896
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:896_Mixed,_incl._Nucleoside_monophosphate_biosynthetic_process,_and_Cellular_modified_amino_acid_metabolic_process

description:
  Mixed, incl. Nucleoside monophosphate biosynthetic process, and Cellular modified amino acid metabolic process


id: CL:897
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:897_Mixed,_incl._Ribonucleoside_monophosphate_metabolic_process,_and_Cellular_modified_amino_acid_metabolic_process

description:
  Mixed, incl. Ribonucleoside monophosphate metabolic process, and Cellular modified amino acid metabolic process


id: CL:898
description: Ribonucleoside monophosphate metabolic process, and One-carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:898_Ribonucleoside_monophosphate_metabolic_process,_and_One-carbon_metabolism


id: CL:899
description: Ribonucleoside monophosphate biosynthetic process, and One-carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:899_Ribonucleoside_monophosphate_biosynthetic_process,_and_One-carbon_metabolism


id: CL:900
description: De novo IMP biosynthetic process, and One-carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:900_De_novo_IMP_biosynthetic_process,_and_One-carbon_metabolism


id: CL:908
description: Phosphoribosylformylglycinamidine synthase activity, and Formyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:908_Phosphoribosylformylglycinamidine_synthase_activity,_and_Formyl_transferase


id: CL:930
description: Mixed, incl. One-carbon metabolism, and NusB family
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:930_Mixed,_incl._One-carbon_metabolism,_and_NusB_family


id: CL:948
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity, and Amidohydrolase family
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:948_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity,_and_Amidohydrolase_family


id: CL:968
description: Mixed, incl. Purine nucleotide salvage, and CBS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:968_Mixed,_incl._Purine_nucleotide_salvage,_and_CBS_domain


id: CL:972
description: Mixed, incl. GMP biosynthesis, and Nucleotidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:972_Mixed,_incl._GMP_biosynthesis,_and_Nucleotidase_activity


id: CL:974
description: GMP biosynthesis, and PP-loop family
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:974_GMP_biosynthesis,_and_PP-loop_family


id: CL:997
description: Mixed, incl. Riboflavin metabolic process, and Cellular modified amino acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:997_Mixed,_incl._Riboflavin_metabolic_process,_and_Cellular_modified_amino_acid_biosynthetic_process


id: CL:998
description: Riboflavin metabolic process, and Folic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_43775_STRINGid_CL:998_Riboflavin_metabolic_process,_and_Folic_acid_metabolic_process


id: GO:0000462
description: Maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
memo: https://amigo.geneontology.org/amigo/term/GO:0000462
golevel: 11
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0000462_Maturation_of_SSU-rRNA_from_tricistronic_rRNA_transcript_(SSU-rRNA,_5.8S_rRNA,_LSU-rRNA)


id: GO:0000701
description: Purine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0000701
golevel: 7
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0000701_Purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 10
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0002926
description: tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation
memo: https://amigo.geneontology.org/amigo/term/GO:0002926
golevel: 13
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0002926_tRNA_wobble_base_5-methoxycarbonylmethyl-2-thiouridinylation


id: GO:0003825
description: Alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003825
golevel: 7
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0003825_Alpha,alpha-trehalose-phosphate_synthase_(UDP-forming)_activity


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003864
description: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003864
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0003864_3-methyl-2-oxobutanoate_hydroxymethyltransferase_activity


id: GO:0003871
description: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003871
golevel: 6
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0003871_5-methyltetrahydropteroyltriglutamate-homocysteine_S-methyltransferase_activity


id: GO:0003882
description: CDP-diacylglycerol-serine O-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003882
golevel: 6
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0003882_CDP-diacylglycerol-serine_O-phosphatidyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 6
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0004015
description: adenosylmethionine-8-amino-7-oxononanoate transaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004015
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0004015_adenosylmethionine-8-amino-7-oxononanoate_transaminase_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004316
description: 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004316
golevel: 6
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0004316_3-oxoacyl-[acyl-carrier-protein]_reductase_(NADPH)_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
golevel: 6
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 6
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004648
description: O-phospho-L-serine:2-oxoglutarate aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004648
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0004648_O-phospho-L-serine:2-oxoglutarate_aminotransferase_activity


id: GO:0004719
description: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004719
golevel: 8
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0004719_protein-L-isoaspartate_(D-aspartate)_O-methyltransferase_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0005477
description: Pyruvate secondary active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005477
golevel: 7
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0005477_Pyruvate_secondary_active_transmembrane_transporter_activity


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 11
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0007156
description: Homophilic cell adhesion via plasma membrane adhesion molecules
memo: https://amigo.geneontology.org/amigo/term/GO:0007156
golevel: 5
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0007156_Homophilic_cell_adhesion_via_plasma_membrane_adhesion_molecules


id: GO:0008271
description: Secondary active sulfate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008271
golevel: 6
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0008271_Secondary_active_sulfate_transmembrane_transporter_activity


id: GO:0008425
description: 2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008425
golevel: 7
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0008425_2-polyprenyl-6-methoxy-1,4-benzoquinone_methyltransferase_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 7
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008657
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008657
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0008657_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_inhibitor_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008685
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008685
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0008685_2-C-methyl-D-erythritol_2,4-cyclodiphosphate_synthase_activity


id: GO:0008690
description: 3-deoxy-manno-octulosonate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008690
golevel: 6
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0008690_3-deoxy-manno-octulosonate_cytidylyltransferase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
golevel: 6
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008759
description: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008759
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0008759_UDP-3-O-[3-hydroxymyristoyl]_N-acetylglucosamine_deacetylase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008780
description: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008780
golevel: 6
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0008780_acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine_O-acyltransferase_activity


id: GO:0008817
description: cob(I)yrinic acid a,c-diamide adenosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008817
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0008817_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0008982
description: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008982
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0008982_protein-N(PI)-phosphohistidine-sugar_phosphotransferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 6
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 9
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 9
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 10
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 9
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 10
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009175
description: Pyrimidine ribonucleoside monophosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009175
golevel: 10
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0009175_Pyrimidine_ribonucleoside_monophosphate_catabolic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 9
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 10
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009196
description: Pyrimidine deoxyribonucleoside diphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009196
golevel: 9
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0009196_Pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process


id: GO:0009197
description: Pyrimidine deoxyribonucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009197
golevel: 10
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0009197_Pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 9
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 10
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009210
description: Pyrimidine ribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009210
golevel: 10
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0009210_Pyrimidine_ribonucleoside_triphosphate_catabolic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 9
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 10
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 10
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 9
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 10
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009401
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system
memo: https://amigo.geneontology.org/amigo/term/GO:0009401
golevel: 8
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0009401_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 6
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 6
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 6
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
golevel: 3
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015355
description: Secondary active monocarboxylate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015355
golevel: 6
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0015355_Secondary_active_monocarboxylate_transmembrane_transporter_activity


id: GO:0015415
description: ATPase-coupled phosphate ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015415
golevel: 7
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0015415_ATPase-coupled_phosphate_ion_transmembrane_transporter_activity


id: GO:0015451
description: Decarboxylation-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015451
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0015451_Decarboxylation-driven_active_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015658
description: Branched-chain amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015658
golevel: 6
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0015658_Branched-chain_amino_acid_transmembrane_transporter_activity


id: GO:0015975
description: Energy derivation by oxidation of reduced inorganic compounds
memo: https://amigo.geneontology.org/amigo/term/GO:0015975
golevel: 4
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0015975_Energy_derivation_by_oxidation_of_reduced_inorganic_compounds


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016622
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, cytochrome as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016622
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016622_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_cytochrome_as_acceptor


id: GO:0016625
memo: https://amigo.geneontology.org/amigo/term/GO:0016625
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016625_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_iron-sulfur_protein_as_acceptor

description:
  Oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016641
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016641
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016641_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_oxygen_as_acceptor


id: GO:0016642
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016642
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016642_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_disulfide_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016657
description: Oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016657
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016657_Oxidoreductase_activity,_acting_on_NAD(P)H,_nitrogenous_group_as_acceptor


id: GO:0016661
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016661
golevel: 3
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016661_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors


id: GO:0016662
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016662
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016662_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors,_cytochrome_as_acceptor


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016671
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016671
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016671_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: GO:0016672
memo: https://amigo.geneontology.org/amigo/term/GO:0016672
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016672_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor


id: GO:0016673
description: Oxidoreductase activity, acting on a sulfur group of donors, iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016673
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016673_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_iron-sulfur_protein_as_acceptor


id: GO:0016699
description: Oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016699
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016699_Oxidoreductase_activity,_acting_on_hydrogen_as_donor,_iron-sulfur_protein_as_acceptor


id: GO:0016701
description: Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
memo: https://amigo.geneontology.org/amigo/term/GO:0016701
golevel: 3
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016701_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen


id: GO:0016702
memo: https://amigo.geneontology.org/amigo/term/GO:0016702
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016702_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_two_atoms_of_oxygen

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen


id: GO:0016705
memo: https://amigo.geneontology.org/amigo/term/GO:0016705
golevel: 3
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016705_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: GO:0016709
memo: https://amigo.geneontology.org/amigo/term/GO:0016709
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016709_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen


id: GO:0016712
memo: https://amigo.geneontology.org/amigo/term/GO:0016712
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016712_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_reduced_flavin_or_flavoprotein_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen


id: GO:0016716
memo: https://amigo.geneontology.org/amigo/term/GO:0016716
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016716_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_another_compound_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen


id: GO:0016721
description: Oxidoreductase activity, acting on superoxide radicals as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016721
golevel: 3
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016721_Oxidoreductase_activity,_acting_on_superoxide_radicals_as_acceptor


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016730
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016730
golevel: 3
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016730_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors


id: GO:0016731
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016731
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016731_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_NAD_or_NADP_as_acceptor


id: GO:0016732
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors, dinitrogen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016732
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016732_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_dinitrogen_as_acceptor


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
golevel: 6
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016823
description: Hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances
memo: https://amigo.geneontology.org/amigo/term/GO:0016823
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016823_Hydrolase_activity,_acting_on_acid_carbon-carbon_bonds,_in_ketonic_substances


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016856
description: Racemase and epimerase activity, acting on hydroxy acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016856
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016856_Racemase_and_epimerase_activity,_acting_on_hydroxy_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016863
description: Intramolecular oxidoreductase activity, transposing C=C bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016863
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016863_Intramolecular_oxidoreductase_activity,_transposing_C=C_bonds


id: GO:0016868
description: Intramolecular transferase activity, phosphotransferases
memo: https://amigo.geneontology.org/amigo/term/GO:0016868
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016868_Intramolecular_transferase_activity,_phosphotransferases


id: GO:0016869
description: Intramolecular transferase activity, transferring amino groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016869
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016869_Intramolecular_transferase_activity,_transferring_amino_groups


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016888
description: Endodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016888
golevel: 7
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016888_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016889
description: Endodeoxyribonuclease activity, producing 3-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016889
golevel: 7
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016889_Endodeoxyribonuclease_activity,_producing_3-phosphomonoesters


id: GO:0016891
description: Endoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016891
golevel: 7
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016891_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
golevel: 6
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016894
memo: https://amigo.geneontology.org/amigo/term/GO:0016894
golevel: 6
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016894_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_3-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3-phosphomonoesters


id: GO:0016895
description: Exodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016895
golevel: 7
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016895_Exodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016903
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016903
golevel: 3
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0016903_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors


id: GO:0018315
description: Molybdenum incorporation into molybdenum-molybdopterin complex
memo: https://amigo.geneontology.org/amigo/term/GO:0018315
golevel: 7
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0018315_Molybdenum_incorporation_into_molybdenum-molybdopterin_complex


id: GO:0018339
description: peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid
memo: https://amigo.geneontology.org/amigo/term/GO:0018339
golevel: 8
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0018339_peptidyl-L-beta-methylthioaspartic_acid_biosynthetic_process_from_peptidyl-aspartic_acid


id: GO:0018807
description: 6-hydroxycyclohex-1-ene-1-carboxyl-CoA hydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0018807
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0018807_6-hydroxycyclohex-1-ene-1-carboxyl-CoA_hydratase_activity


id: GO:0019171
description: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019171
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0019171_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0019219
description: Regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019219
golevel: 5
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0019219_Regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0019243
description: Methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
memo: https://amigo.geneontology.org/amigo/term/GO:0019243
golevel: 9
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0019243_Methylglyoxal_catabolic_process_to_D-lactate_via_S-lactoyl-glutathione


id: GO:0019288
description: Isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0019288
golevel: 8
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0019288_Isopentenyl_diphosphate_biosynthetic_process,_methylerythritol_4-phosphate_pathway


id: GO:0019294
description: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019294
golevel: 8
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0019294_keto-3-deoxy-D-manno-octulosonic_acid_biosynthetic_process


id: GO:0019829
description: ATPase-coupled cation transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019829
golevel: 6
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0019829_ATPase-coupled_cation_transmembrane_transporter_activity


id: GO:0030604
description: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0030604
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0030604_1-deoxy-D-xylulose-5-phosphate_reductoisomerase_activity


id: GO:0030698
description: 5,10-methylenetetrahydrofolate-dependent tRNA (m5U54) methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0030698
golevel: 9
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0030698_5,10-methylenetetrahydrofolate-dependent_tRNA_(m5U54)_methyltransferase_activity


id: GO:0031234
description: Extrinsic component of cytoplasmic side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031234
golevel: 6
name:
  GOCC.STRING_v12.0_43775_STRINGid_GO:0031234_Extrinsic_component_of_cytoplasmic_side_of_plasma_membrane


id: GO:0032414
description: Positive regulation of ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0032414
golevel: 8
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0032414_Positive_regulation_of_ion_transmembrane_transporter_activity


id: GO:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
golevel: 3
name:
  GOCC.STRING_v12.0_43775_STRINGid_GO:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GO:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
golevel: 3
name:
  GOCC.STRING_v12.0_43775_STRINGid_GO:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GO:0033283
description: ATPase-coupled organic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033283
golevel: 6
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0033283_ATPase-coupled_organic_acid_transmembrane_transporter_activity


id: GO:0033284
description: ATPase-coupled carboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033284
golevel: 7
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0033284_ATPase-coupled_carboxylic_acid_transmembrane_transporter_activity


id: GO:0033362
description: Lysine biosynthetic process via diaminopimelate, diaminopimelate-aminotransferase pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0033362
golevel: 12
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0033362_Lysine_biosynthetic_process_via_diaminopimelate,_diaminopimelate-aminotransferase_pathway


id: GO:0033467
description: CMP-keto-3-deoxy-D-manno-octulosonic acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033467
golevel: 7
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0033467_CMP-keto-3-deoxy-D-manno-octulosonic_acid_metabolic_process


id: GO:0033468
description: CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033468
golevel: 8
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0033468_CMP-keto-3-deoxy-D-manno-octulosonic_acid_biosynthetic_process


id: GO:0033744
description: L-methionine:thioredoxin-disulfide S-oxidoreductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033744
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0033744_L-methionine:thioredoxin-disulfide_S-oxidoreductase_activity


id: GO:0033818
description: Beta-ketoacyl-acyl-carrier-protein synthase III activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033818
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0033818_Beta-ketoacyl-acyl-carrier-protein_synthase_III_activity


id: GO:0034017
description: trans-2-decenoyl-acyl-carrier-protein isomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034017
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0034017_trans-2-decenoyl-acyl-carrier-protein_isomerase_activity


id: GO:0034023
description: 5-(carboxyamino)imidazole ribonucleotide mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034023
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0034023_5-(carboxyamino)imidazole_ribonucleotide_mutase_activity


id: GO:0034404
description: Nucleobase-containing small molecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034404
golevel: 6
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0034404_Nucleobase-containing_small_molecule_biosynthetic_process


id: GO:0035592
description: Establishment of protein localization to extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0035592
golevel: 6
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0035592_Establishment_of_protein_localization_to_extracellular_region


id: GO:0035998
description: 7,8-dihydroneopterin 3-triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0035998
golevel: 6
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0035998_7,8-dihydroneopterin_3-triphosphate_biosynthetic_process


id: GO:0036361
description: Racemase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0036361
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0036361_Racemase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0036381
description: Pyridoxal 5-phosphate synthase (glutamine hydrolysing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0036381
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0036381_Pyridoxal_5-phosphate_synthase_(glutamine_hydrolysing)_activity


id: GO:0042083
description: 5,10-methylenetetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042083
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0042083_5,10-methylenetetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042084
description: 5-methyltetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042084
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0042084_5-methyltetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042085
description: 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042085
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0042085_5-methyltetrahydropteroyltri-L-glutamate-dependent_methyltransferase_activity


id: GO:0042279
description: Nitrite reductase (cytochrome, ammonia-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042279
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0042279_Nitrite_reductase_(cytochrome,_ammonia-forming)_activity


id: GO:0042777
description: Proton motive force-driven plasma membrane ATP synthesis
memo: https://amigo.geneontology.org/amigo/term/GO:0042777
golevel: 13
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0042777_Proton_motive_force-driven_plasma_membrane_ATP_synthesis


id: GO:0043161
description: Proteasome-mediated ubiquitin-dependent protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0043161
golevel: 9
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0043161_Proteasome-mediated_ubiquitin-dependent_protein_catabolic_process


id: GO:0043165
description: Gram-negative-bacterium-type cell outer membrane assembly
memo: https://amigo.geneontology.org/amigo/term/GO:0043165
golevel: 6
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0043165_Gram-negative-bacterium-type_cell_outer_membrane_assembly


id: GO:0043225
description: ATPase-coupled inorganic anion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043225
golevel: 6
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0043225_ATPase-coupled_inorganic_anion_transmembrane_transporter_activity


id: GO:0043333
description: 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043333
golevel: 8
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0043333_2-octaprenyl-6-methoxy-1,4-benzoquinone_methylase_activity


id: GO:0043709
description: Cell adhesion involved in single-species biofilm formation
memo: https://amigo.geneontology.org/amigo/term/GO:0043709
golevel: 7
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0043709_Cell_adhesion_involved_in_single-species_biofilm_formation


id: GO:0043716
description: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043716
golevel: 6
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0043716_2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate_phosphatase_activity


id: GO:0043772
description: Acyl-phosphate glycerol-3-phosphate acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043772
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0043772_Acyl-phosphate_glycerol-3-phosphate_acyltransferase_activity


id: GO:0044419
description: Biological process involved in interspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0044419
golevel: 1
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0044419_Biological_process_involved_in_interspecies_interaction_between_organisms


id: GO:0044769
description: ATPase activity, coupled to transmembrane movement of ions, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0044769
golevel: 7
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0044769_ATPase_activity,_coupled_to_transmembrane_movement_of_ions,_rotational_mechanism


id: GO:0045261
description: Proton-transporting ATP synthase complex, catalytic core F(1)
memo: https://amigo.geneontology.org/amigo/term/GO:0045261
golevel: 6
name:
  GOCC.STRING_v12.0_43775_STRINGid_GO:0045261_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: GO:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
golevel: 6
name:
  GOCC.STRING_v12.0_43775_STRINGid_GO:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GO:0045934
description: Negative regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045934
golevel: 6
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0045934_Negative_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0045935
description: Positive regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045935
golevel: 6
name:
  GOBP.STRING_v12.0_43775_STRINGid_GO:0045935_Positive_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0046428
description: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046428
golevel: 6
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0046428_1,4-dihydroxy-2-naphthoate_octaprenyltransferase_activity


id: GO:0046429
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046429
golevel: 5
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0046429_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_synthase_activity


id: GO:0046537
description: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046537
golevel: 6
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0046537_2,3-bisphosphoglycerate-independent_phosphoglycerate_mutase_activity


id: GO:0046538
description: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046538
golevel: 6
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0046538_2,3-bisphosphoglycerate-dependent_phosphoglycerate_mutase_activity


id: GO:0046857
memo: https://amigo.geneontology.org/amigo/term/GO:0046857
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0046857_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors,_with_NAD_or_NADP_as_acceptor

description:
  Oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor


id: GO:0046912
description: Acyltransferase activity, acyl groups converted into alkyl on transfer
memo: https://amigo.geneontology.org/amigo/term/GO:0046912
golevel: 4
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0046912_Acyltransferase_activity,_acyl_groups_converted_into_alkyl_on_transfer


id: GO:0046933
description: Proton-transporting ATP synthase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046933
golevel: 8
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0046933_Proton-transporting_ATP_synthase_activity,_rotational_mechanism


id: GO:0046961
description: Proton-transporting ATPase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046961
golevel: 8
name:
  GOMF.STRING_v12.0_43775_STRINGid_GO:0046961_Proton-transporting_ATPase_activity,_rotational_mechanism


