# geneInfo

ensembl_gene_id: Marpi_0001
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: Marpi_0002
symbol: msrA
gene_biotype: protein_coding
description:
  methionine-S-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: Marpi_0005
symbol: nfi
gene_biotype: protein_coding
description:
  Deoxyinosine 3'endonuclease (endonuclease V); DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA.


ensembl_gene_id: Marpi_0006
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: Marpi_0007
symbol: AEX84467.1
gene_biotype: protein_coding
description:
  DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]


ensembl_gene_id: Marpi_0011
symbol: AEX84471.1
gene_biotype: protein_coding
description:
  Phosphoglycerate dehydrogenase-like oxidoreductase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain.


ensembl_gene_id: Marpi_0012
symbol: AEX84472.1
gene_biotype: protein_coding
description:
  Phosphate starvation-inducible protein PhoH, predicted ATPase; PFAM: PhoH-like protein; manually curated; non-canonical start codon.


ensembl_gene_id: Marpi_0013
symbol: AEX84473.1
gene_biotype: protein_coding
description:
  Putative domain HDIG-containing protein; PFAM: HD domain; 7TM receptor with intracellular HD hydrolase; TIGRFAM: uncharacterized domain HDIG.


ensembl_gene_id: Marpi_0014
symbol: ybeY
gene_biotype: protein_coding
description:
  Metalloprotein, YbeY/UPF0054 family; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: Marpi_0016
symbol: AEX84476.1
gene_biotype: protein_coding
description:
  PFAM: C4-dicarboxylate transporter/malic acid transport protein; TIGRFAM: C4-dicarboxylate transporter/malic acid transport protein.


ensembl_gene_id: Marpi_0018
symbol: AEX84478.1
gene_biotype: protein_coding
description:
  Putative redox protein, regulator of disulfide bond formation; PFAM: SirA-like protein; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: Marpi_0024
symbol: AEX84484.1
gene_biotype: protein_coding
description:
  Dihydrolipoamide dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase.


ensembl_gene_id: Marpi_0025
symbol: AEX84485.1
gene_biotype: protein_coding
description:
  Putative redox protein, regulator of disulfide bond formation; PFAM: Bacterial regulatory protein, arsR family; SirA-like protein; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: Marpi_0026
symbol: sfsA
gene_biotype: protein_coding
description:
  PFAM: Sugar fermentation stimulation protein; TIGRFAM: sugar fermentation stimulation protein; Belongs to the SfsA family.


ensembl_gene_id: Marpi_0036
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: Marpi_0039
symbol: AEX84499.1
gene_biotype: protein_coding
description:
  PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB.


ensembl_gene_id: Marpi_0041
symbol: AEX84500.1
gene_biotype: protein_coding
description:
  ATP-dependent exonuclase V beta subunit, helicase and exonuclease domain-containing; PFAM: Protein of unknown function (DUF2800).


ensembl_gene_id: Marpi_0042
symbol: AEX84501.1
gene_biotype: protein_coding
description:
  DNA helicase, putative; PFAM: Type II/IV secretion system protein; Viral (Superfamily 1) RNA helicase; TIGRFAM: DNA helicase, putative.


ensembl_gene_id: Marpi_0043
symbol: AEX84502.1
gene_biotype: protein_coding
description:
  Beta-ketoacyl-acyl-carrier-protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: Marpi_0045
symbol: fabZ
gene_biotype: protein_coding
description:
  Beta-hydroxyacyl-(acyl carrier protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: Marpi_0046
symbol: AEX84505.1
gene_biotype: protein_coding
description:
  PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III.


ensembl_gene_id: Marpi_0047
symbol: AEX84506.1
gene_biotype: protein_coding
description:
  2-nitropropane dioxygenase-like enzyme; PFAM: 2-nitropropane dioxygenase; TIGRFAM: putative enoyl-(acyl-carrier-protein) reductase II.


ensembl_gene_id: Marpi_0049
symbol: pcp
gene_biotype: protein_coding
description:
  Pyroglutamyl-peptidase I; Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family.


ensembl_gene_id: Marpi_0050
symbol: AEX84509.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Putative transposase, YhgA-like; TIGRFAM: conserved hypothetical protein (putative transposase or invertase).


ensembl_gene_id: Marpi_0052
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: Marpi_0058
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: Marpi_0060
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: Marpi_0061
symbol: AEX84519.1
gene_biotype: protein_coding
description:
  ABC-type sugar transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein.


ensembl_gene_id: Marpi_0064
symbol: AEX84522.1
gene_biotype: protein_coding
description:
  TIGR00153 family protein; PFAM: Protein of unknown function DUF47; TIGRFAM: TIGR00153 family protein.


ensembl_gene_id: Marpi_0069
symbol: AEX84527.1
gene_biotype: protein_coding
description:
  Putative domain HDIG-containing protein; PFAM: HD domain; GAF domain; TIGRFAM: uncharacterized domain HDIG.


ensembl_gene_id: Marpi_0070
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III, subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: Marpi_0072
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: Marpi_0073
symbol: AEX84531.1
gene_biotype: protein_coding
description:
  Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: Marpi_0075
symbol: alaS
gene_biotype: protein_coding
description:
  alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: Marpi_0077
symbol: gatC
gene_biotype: protein_coding
description:
  glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: Marpi_0078
symbol: AEX84536.1
gene_biotype: protein_coding
description:
  Putative endonuclease related to Holliday junction resolvase; PFAM: Uncharacterised protein family UPF0102; TIGRFAM: TIGR00252 family protein; Belongs to the UPF0102 family.


ensembl_gene_id: Marpi_0079
symbol: AEX84537.1
gene_biotype: protein_coding
description:
  Phosphomannomutase; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I.


ensembl_gene_id: Marpi_0081
symbol: truA
gene_biotype: protein_coding
description:
  Pseudouridylate synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: Marpi_0083
symbol: AEX84541.1
gene_biotype: protein_coding
description:
  ABC-type metal ion transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: Marpi_0084
symbol: metN
gene_biotype: protein_coding
description:
  ABC-type metal ion transport system, ATPase component; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: Marpi_0085
symbol: AEX84543.1
gene_biotype: protein_coding
description:
  ABC-type metal ion transport system, periplasmic component/surface antigen; PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family.


ensembl_gene_id: Marpi_0088
symbol: AEX84545.1
gene_biotype: protein_coding
description:
  PAS domain S-box; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box.


ensembl_gene_id: Marpi_0090
symbol: AEX84547.1
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Marpi_0091
symbol: AEX84548.1
gene_biotype: protein_coding
description:
  (p)ppGpp synthetase, RelA/SpoT family; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: Marpi_0092
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: Marpi_0094
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: Marpi_0096
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: Marpi_0104
symbol: AEX84561.1
gene_biotype: protein_coding
description:
  Iron-only hydrogenase maturation rSAM protein HydG; PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: iron-only hydrogenase maturation rSAM protein HydG; thiazole biosynthesis protein ThiH.


ensembl_gene_id: Marpi_0106
symbol: AEX84563.1
gene_biotype: protein_coding
description:
  PFAM: GTPase of unknown function; TIGRFAM: hydrogenase maturation GTPase HydF; small GTP-binding protein domain.


ensembl_gene_id: Marpi_0110
symbol: AEX84567.1
gene_biotype: protein_coding
description:
  DNA-binding protein, YbaB/EbfC family; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: Marpi_0111
symbol: AEX84568.1
gene_biotype: protein_coding
description:
  PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: Marpi_0112
symbol: pgk
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: Marpi_0118
symbol: AEX84575.1
gene_biotype: protein_coding
description:
  ABC-type polysaccharide/polyol phosphate export systems, permease component; PFAM: ABC-2 type transporter.


ensembl_gene_id: Marpi_0120
symbol: AEX84577.1
gene_biotype: protein_coding
description:
  RNA methyltransferase, RsmE family; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: Marpi_0121
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: Marpi_0129
symbol: AEX84586.1
gene_biotype: protein_coding
description:
  PFAM: tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: Marpi_0130
symbol: AEX84587.1
gene_biotype: protein_coding
description:
  PFAM: Carbohydrate phosphorylase; Protein of unknown function (DUF3417); TIGRFAM: alpha-glucan phosphorylases.


ensembl_gene_id: Marpi_0132
symbol: AEX84589.1
gene_biotype: protein_coding
description:
  SOS response transcriptional repressor, RecA-mediated autopeptidase; PFAM: Helix-turn-helix; Peptidase S24-like.


ensembl_gene_id: Marpi_0134
symbol: AEX84590.1
gene_biotype: protein_coding
description:
  PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: Marpi_0135
symbol: AEX84591.1
gene_biotype: protein_coding
description:
  Putative transcriptional regulator containing the HTH domain; PFAM: Putative transcriptional regulators (Ypuh-like); TIGRFAM: segregation and condensation protein B.


ensembl_gene_id: Marpi_0137
symbol: AEX84593.1
gene_biotype: protein_coding
description:
  PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: Marpi_0140
symbol: gcvPB
gene_biotype: protein_coding
description:
  Glycine cleavage system protein P; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily.


ensembl_gene_id: Marpi_0141
symbol: gcvPA
gene_biotype: protein_coding
description:
  Glycine cleavage system protein P; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.


ensembl_gene_id: Marpi_0142
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: Marpi_0143
symbol: gcvT
gene_biotype: protein_coding
description:
  Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine.


ensembl_gene_id: Marpi_0145
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: Marpi_0146
symbol: AEX84602.1
gene_biotype: protein_coding
description:
  PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; Belongs to the pyruvate kinase family.


ensembl_gene_id: Marpi_0147
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: Marpi_0148
symbol: AEX84604.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF401); TIGRFAM: converved hypothetical integral membrane protein.


ensembl_gene_id: Marpi_0149
symbol: glyA
gene_biotype: protein_coding
description:
  Glycine/serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: Marpi_0150
symbol: AEX84606.1
gene_biotype: protein_coding
description:
  Transcriptional regulator with HTH domain and aminotransferase domain; PFAM: Aminotransferase class I and II.


ensembl_gene_id: Marpi_0152
symbol: AEX84608.1
gene_biotype: protein_coding
description:
  Phosphotransacetylase; PFAM: Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate butyryltransferase.


ensembl_gene_id: Marpi_0157
symbol: AEX84613.1
gene_biotype: protein_coding
description:
  2-oxoacid:ferredoxin oxidoreductase, beta subunit; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain.


ensembl_gene_id: Marpi_0158
symbol: AEX84614.1
gene_biotype: protein_coding
description:
  PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family.


ensembl_gene_id: Marpi_0170
symbol: AEX84626.1
gene_biotype: protein_coding
description:
  ATP-dependent exonuclase V beta subunit, helicase and exonuclease domain-containing; PFAM: Domain of unknown function DUF83; UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily.


ensembl_gene_id: Marpi_0172
symbol: tgt
gene_biotype: protein_coding
description:
  tRNA-guanine transglycosylase, queuosine-34-forming; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of  [...]


ensembl_gene_id: Marpi_0174
symbol: AEX84629.1
gene_biotype: protein_coding
description:
  Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: Marpi_0177
symbol: AEX84632.1
gene_biotype: protein_coding
description:
  Multisubunit Na+/H+ antiporter, MnhF subunit; PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF).


ensembl_gene_id: Marpi_0179
symbol: AEX84634.1
gene_biotype: protein_coding
description:
  Putative subunit of the multisubunit Na+/H+ antiporter; PFAM: Bacterial extracellular solute-binding proteins, family 3.


ensembl_gene_id: Marpi_0181
symbol: AEX84636.1
gene_biotype: protein_coding
description:
  Multisubunit Na+/H+ antiporter, MnhC subunit; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L.


ensembl_gene_id: Marpi_0182
symbol: AEX84637.1
gene_biotype: protein_coding
description:
  Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains.


ensembl_gene_id: Marpi_0185
symbol: AEX84640.1
gene_biotype: protein_coding
description:
  Ferrous iron transporter FeoB; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: Marpi_0191
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: Marpi_0192
symbol: AEX84647.1
gene_biotype: protein_coding
description:
  RNA methyltransferase, RsmD family; PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family.


ensembl_gene_id: Marpi_0195
symbol: AEX84650.1
gene_biotype: protein_coding
description:
  tRNA nucleotidyltransferase/poly(A) polymerase; PFAM: CBS domain; Poly A polymerase head domain; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: Marpi_0200
symbol: AEX84655.1
gene_biotype: protein_coding
description:
  PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: Marpi_0202
symbol: clpX
gene_biotype: protein_coding
description:
  Endopeptidase Clp ATP-binding regulatory subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: Marpi_0203
symbol: tsaD
gene_biotype: protein_coding
description:
  Putative glycoprotease GCP; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: Marpi_0204
symbol: AEX84659.1
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: Marpi_0206
symbol: AEX84661.1
gene_biotype: protein_coding
description:
  Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; PFAM: Response regulator receiver domain.


ensembl_gene_id: Marpi_0207
symbol: AEX84662.1
gene_biotype: protein_coding
description:
  ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter; ABC transporter transmembrane region.


ensembl_gene_id: Marpi_0216
symbol: AEX84668.1
gene_biotype: protein_coding
description:
  Putative ATPase (AAA+ superfamily); PFAM: Archaeal ATPase; Archaea bacterial proteins of unknown function; manually curated; non-canonical start codon.


ensembl_gene_id: Marpi_0218
symbol: AEX84670.1
gene_biotype: protein_coding
description:
  Putative ATPase (AAA+ superfamily); PFAM: Archaeal ATPase; Archaea bacterial proteins of unknown function.


ensembl_gene_id: Marpi_0223
symbol: AEX84675.1
gene_biotype: protein_coding
description:
  Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; PFAM: Response regulator receiver domain; TIGRFAM: intein N-terminal splicing region.


ensembl_gene_id: Marpi_0224
symbol: AEX84676.1
gene_biotype: protein_coding
description:
  PAS domain S-box; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; TIGRFAM: PAS domain S-box.


ensembl_gene_id: Marpi_0228
symbol: AEX84680.1
gene_biotype: protein_coding
description:
  Serine phosphatase RsbU, regulator of sigma subunit; PFAM: Cache domain; Stage II sporulation protein E (SpoIIE).


ensembl_gene_id: Marpi_0231
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase, NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: Marpi_0233
symbol: acpS
gene_biotype: protein_coding
description:
  Holo-(acyl-carrier-protein) synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: Marpi_0235
symbol: mutS2
gene_biotype: protein_coding
description:
  MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: Marpi_0237
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: Marpi_0238
symbol: nusB
gene_biotype: protein_coding
description:
  Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: Marpi_0240
symbol: efp
gene_biotype: protein_coding
description:
  Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: Marpi_0241
symbol: AEX84693.1
gene_biotype: protein_coding
description:
  Xaa-Pro aminopeptidase; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain; Belongs to the peptidase M24B family.


ensembl_gene_id: Marpi_0242
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: Marpi_0243
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: Marpi_0245
symbol: obg
gene_biotype: protein_coding
description:
  Obg family GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: Marpi_0246
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate/nicotinamide nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: Marpi_0247
symbol: AEX84699.1
gene_biotype: protein_coding
description:
  PFAM: Shikimate dehydrogenase substrate binding domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase.


ensembl_gene_id: Marpi_0250
symbol: AEX84702.1
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase/exopolyphosphatase; PFAM: DRTGG domain; DHH family; DHHA2 domain; CBS domain.


ensembl_gene_id: Marpi_0252
symbol: AEX84704.1
gene_biotype: protein_coding
description:
  ABC-type (unclassified) transport system, ATPase component; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter.


ensembl_gene_id: Marpi_0254
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: Marpi_0255
symbol: AEX84707.1
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: Marpi_0259
symbol: murJ
gene_biotype: protein_coding
description:
  Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: Marpi_0260
symbol: AEX84712.1
gene_biotype: protein_coding
description:
  Fructose-1-phosphate kinase/fructose-6-phosphate kinase; PFAM: pfkB family carbohydrate kinase; TIGRFAM: hexose kinase, 1-phosphofructokinase family.


ensembl_gene_id: Marpi_0262
symbol: AEX84714.1
gene_biotype: protein_coding
description:
  MiaB-like tRNA modifying enzyme; PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme; radical SAM methylthiotransferase, MiaB/RimO family.


ensembl_gene_id: Marpi_0263
symbol: AEX84715.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; PFAM: Aminotransferase class IV.


ensembl_gene_id: Marpi_0265
symbol: gyrB
gene_biotype: protein_coding
description:
  Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA stran [...]


ensembl_gene_id: Marpi_0268
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: Marpi_0269
symbol: AEX84721.1
gene_biotype: protein_coding
description:
  Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; PFAM: Type II/IV secretion system protein.


ensembl_gene_id: Marpi_0272
symbol: AEX84724.1
gene_biotype: protein_coding
description:
  CRISPR-associated endoribonuclease Cas6; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA).


ensembl_gene_id: Marpi_0274
symbol: AEX84726.1
gene_biotype: protein_coding
description:
  TIGRFAM: CRISPR-associated autoregulator DevR family; CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP.


ensembl_gene_id: Marpi_0275
symbol: AEX84727.1
gene_biotype: protein_coding
description:
  PFAM: CRISPR-associated protein (Cas_Cas5); TIGRFAM: CRISPR-associated protein Cas5, subtype I-B/TNEAP; CRISPR-associated protein Cas5, N-terminal domain.


ensembl_gene_id: Marpi_0276
symbol: AEX84728.1
gene_biotype: protein_coding
description:
  PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated endonuclease Cas3-HD.


ensembl_gene_id: Marpi_0277
symbol: AEX84729.1
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas4; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.


ensembl_gene_id: Marpi_0278
symbol: cas1
gene_biotype: protein_coding
description:
  CRISPR-associated endonuclease Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: Marpi_0279
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated endoribonuclease Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: Marpi_0287
symbol: AEX84738.1
gene_biotype: protein_coding
description:
  ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter.


ensembl_gene_id: Marpi_0289
symbol: trpB
gene_biotype: protein_coding
description:
  Pyridoxal-phosphate dependent TrpB-like enzyme; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: Marpi_0294
symbol: AEX84745.1
gene_biotype: protein_coding
description:
  Histidine kinase,STAS domain-containing protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; STAS domain.


ensembl_gene_id: Marpi_0303
symbol: AEX84754.1
gene_biotype: protein_coding
description:
  PFAM: Conserved phage C-terminus (Phg_2220_C); TIGRFAM: phage conserved hypothetical protein, C-terminal domain.


ensembl_gene_id: Marpi_0307
symbol: AEX84758.1
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.


ensembl_gene_id: Marpi_0334
symbol: AEX84784.1
gene_biotype: protein_coding
description:
  PFAM: Phage-related minor tail protein; TIGRFAM: phage tail tape measure protein, TP901 family, core region.


ensembl_gene_id: Marpi_0347
symbol: AEX84796.1
gene_biotype: protein_coding
description:
  Glycosyl transferase possibly involved in lipopolysaccharide synthesis; PFAM: Bacterial sugar transferase.


ensembl_gene_id: Marpi_0353
symbol: AEX84802.1
gene_biotype: protein_coding
description:
  PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTPase YqeH; small GTP-binding protein domain.


ensembl_gene_id: Marpi_0354
symbol: AEX84803.1
gene_biotype: protein_coding
description:
  Propanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.


ensembl_gene_id: Marpi_0356
symbol: AEX84804.1
gene_biotype: protein_coding
description:
  Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain; TIGRFAM: methyltransferase, FkbM family.


ensembl_gene_id: Marpi_0359
symbol: leuS
gene_biotype: protein_coding
description:
  PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: Marpi_0360
symbol: rex
gene_biotype: protein_coding
description:
  AT-rich DNA-binding protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: Marpi_0362
symbol: rsmI
gene_biotype: protein_coding
description:
  Putative S-adenosylmethionine-dependent methyltransferase, YraL family; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: Marpi_0363
symbol: AEX84810.1
gene_biotype: protein_coding
description:
  PFAM: Exonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; Belongs to the XseA family.


ensembl_gene_id: Marpi_0369
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: Marpi_0370
symbol: AEX84817.1
gene_biotype: protein_coding
description:
  Orotidine 5''-phosphate decarboxylase, subfamily 2; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP). Belongs to the OMP decarboxylase family. Type 2 subfamily.


ensembl_gene_id: Marpi_0372
symbol: AEX84819.1
gene_biotype: protein_coding
description:
  2-polyprenylphenol hydroxylase-like oxidoreductase; PFAM: Oxidoreductase FAD-binding domain; Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B.


ensembl_gene_id: Marpi_0374
symbol: AEX84821.1
gene_biotype: protein_coding
description:
  PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; Aspartate carbamoyltransferase regulatory chain, metal binding domain; Aspartate carbamoyltransferase regulatory chain, allosteric domain; TIGRFAM: aspartate carbamoyltransferase, regulatory subunit; aspartate carbamoyltransferase.


ensembl_gene_id: Marpi_0378
symbol: purE
gene_biotype: protein_coding
description:
  Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: Marpi_0380
symbol: purS
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase, purS protein; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought [...]


ensembl_gene_id: Marpi_0381
symbol: purQ
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]


ensembl_gene_id: Marpi_0382
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase II; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist  [...]


ensembl_gene_id: Marpi_0383
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: Marpi_0384
symbol: purM
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase.


ensembl_gene_id: Marpi_0385
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: Marpi_0386
symbol: purH
gene_biotype: protein_coding
description:
  PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase.


ensembl_gene_id: Marpi_0387
symbol: purD
gene_biotype: protein_coding
description:
  Phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase; Belongs to the GARS family.


ensembl_gene_id: Marpi_0390
symbol: AEX84834.1
gene_biotype: protein_coding
description:
  SNF family Na+-dependent transporter; PFAM: Sodium:neurotransmitter symporter family; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.


ensembl_gene_id: Marpi_0393
symbol: AEX84837.1
gene_biotype: protein_coding
description:
  PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.


ensembl_gene_id: Marpi_0395
symbol: AEX84839.1
gene_biotype: protein_coding
description:
  Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake.


ensembl_gene_id: Marpi_0396
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: Marpi_0397
symbol: AEX84841.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, permease protein PstA; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA.


ensembl_gene_id: Marpi_0398
symbol: AEX84842.1
gene_biotype: protein_coding
description:
  PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstC.


ensembl_gene_id: Marpi_0400
symbol: hppA
gene_biotype: protein_coding
description:
  Vacuolar-type H(+)-translocating pyrophosphatase; Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily.


ensembl_gene_id: Marpi_0401
symbol: AEX84845.1
gene_biotype: protein_coding
description:
  Uncharacterized protein containing a von Willebrand factor type A (vWA) domain; PFAM: Domain of unknown function (DUF2828).


ensembl_gene_id: Marpi_0406
symbol: AEX84850.1
gene_biotype: protein_coding
description:
  PFAM: Domain of unknown function (DUF1874); CRISPR-associated protein (cas_TM1812); TIGRFAM: CRISPR-associated DxTHG motif protein.


ensembl_gene_id: Marpi_0408
symbol: AEX84852.1
gene_biotype: protein_coding
description:
  CRISPR-associated endoribonuclease Cas6; PFAM: Uncharacterized conserved protein (DUF2276); TIGRFAM: CRISPR-associated endoribonuclease Cas6.


ensembl_gene_id: Marpi_0409
symbol: AEX84853.1
gene_biotype: protein_coding
description:
  Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); PFAM: RAMP superfamily; TIGRFAM: CRISPR type III-B/RAMP module RAMP protein Cmr6.


ensembl_gene_id: Marpi_0410
symbol: AEX84854.1
gene_biotype: protein_coding
description:
  PFAM: CRISPR-associated protein (Cas_Cmr5); TIGRFAM: CRISPR type III-B/RAMP module-associated protein Cmr5.


ensembl_gene_id: Marpi_0412
symbol: AEX84856.1
gene_biotype: protein_coding
description:
  PFAM: CRISPR-associated protein (Cas_Cmr3); TIGRFAM: CRISPR type III-B/RAMP module-associated protein Cmr3.


ensembl_gene_id: Marpi_0426
symbol: AEX84870.1
gene_biotype: protein_coding
description:
  ABC-type Fe3+ transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: Marpi_0427
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: Marpi_0429
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: Marpi_0440
symbol: AEX84883.1
gene_biotype: protein_coding
description:
  Metal-dependent hydrolase, beta-lactamase superfamily III; PFAM: Metallo-beta-lactamase superfamily; TIGRFAM: ribonuclease Z, Thermotoga type.


ensembl_gene_id: Marpi_0442
symbol: rpsR
gene_biotype: protein_coding
description:
  Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: Marpi_0448
symbol: AEX84891.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; HAD superfamily (subfamily IIIA) phosphatase, TIGR01668.


ensembl_gene_id: Marpi_0449
symbol: AEX84892.1
gene_biotype: protein_coding
description:
  PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme.


ensembl_gene_id: Marpi_0450
symbol: AEX84893.1
gene_biotype: protein_coding
description:
  Beta-glucosidase/6-phospho-beta- glucosidase/beta-galactosidase; PFAM: Glycosyl hydrolase family 1; Belongs to the glycosyl hydrolase 1 family.


ensembl_gene_id: Marpi_0456
symbol: AEX84899.1
gene_biotype: protein_coding
description:
  ABC-type transport system involved in Fe-S cluster assembly, permease component; PFAM: Uncharacterized protein family (UPF0051).


ensembl_gene_id: Marpi_0457
symbol: AEX84900.1
gene_biotype: protein_coding
description:
  ABC-type transport system involved in Fe-S cluster assembly, ATPase component; PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC.


ensembl_gene_id: Marpi_0459
symbol: AEX84902.1
gene_biotype: protein_coding
description:
  Putative metal-dependent hydrolase related to alanyl-tRNA synthetase HxxxH domain protein; PFAM: Threonyl and Alanyl tRNA synthetase second additional domain.


ensembl_gene_id: Marpi_0461
symbol: argS
gene_biotype: protein_coding
description:
  arginyl-tRNA synthetase; PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase.


ensembl_gene_id: Marpi_0463
symbol: AEX84906.1
gene_biotype: protein_coding
description:
  PFAM: Radical SAM superfamily; B12 binding domain; TIGRFAM: B12-binding domain/radical SAM domain protein, MJ_1487 family.


ensembl_gene_id: Marpi_0466
symbol: AEX84909.1
gene_biotype: protein_coding
description:
  TIGR00266 family protein; PFAM: Protein of unknown function DUF124; TIGRFAM: TIGR00266 family protein.


ensembl_gene_id: Marpi_0467
symbol: AEX84910.1
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease III; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth).


ensembl_gene_id: Marpi_0469
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: Marpi_0470
symbol: AEX84913.1
gene_biotype: protein_coding
description:
  GTP-binding protein YchF; PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF.


ensembl_gene_id: Marpi_0471
symbol: AEX84914.1
gene_biotype: protein_coding
description:
  ATPase, YjeE family; PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family; manually curated; non-canonical start codon.


ensembl_gene_id: Marpi_0472
symbol: AEX84915.1
gene_biotype: protein_coding
description:
  Glycerol kinase; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase; Belongs to the FGGY kinase family.


ensembl_gene_id: Marpi_0478
symbol: AEX84921.1
gene_biotype: protein_coding
description:
  PFAM: Lysine-2,3-aminomutase; Radical SAM superfamily; TIGRFAM: KamA family protein; lysine-2,3-aminomutase.


ensembl_gene_id: Marpi_0485
symbol: AEX84928.1
gene_biotype: protein_coding
description:
  acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Marpi_0495
symbol: AEX84937.1
gene_biotype: protein_coding
description:
  Putative Zn-dependent hydrolase of beta-lactamase fold protein; PFAM: Metallo-beta-lactamase superfamily; Belongs to the UPF0173 family.


ensembl_gene_id: Marpi_0497
symbol: AEX84939.1
gene_biotype: protein_coding
description:
  PFAM: Cobalamin adenosyltransferase; TIGRFAM: ATP:cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.


ensembl_gene_id: Marpi_0501
symbol: AEX84943.1
gene_biotype: protein_coding
description:
  PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain.


ensembl_gene_id: Marpi_0502
symbol: AEX84944.1
gene_biotype: protein_coding
description:
  ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.


ensembl_gene_id: Marpi_0504
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: Marpi_0508
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: Marpi_0512
symbol: rnfC
gene_biotype: protein_coding
description:
  Electron transport complex, RnfABCDGE type, C subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.


ensembl_gene_id: Marpi_0513
symbol: rnfD
gene_biotype: protein_coding
description:
  Electron transport complex, RnfABCDGE type, D subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: Marpi_0514
symbol: rnfG
gene_biotype: protein_coding
description:
  Electron transport complex, RnfABCDGE type, G subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.


ensembl_gene_id: Marpi_0515
symbol: rnfE
gene_biotype: protein_coding
description:
  Electron transport complex, RnfABCDGE type, E subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: Marpi_0516
symbol: rnfA
gene_biotype: protein_coding
description:
  Electron transport complex, RnfABCDGE type, A subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: Marpi_0517
symbol: AEX84959.1
gene_biotype: protein_coding
description:
  Putative NADH:ubiquinone oxidoreductase, subunit RnfB; PFAM: Putative Fe-S cluster; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit.


ensembl_gene_id: Marpi_0522
symbol: AEX84964.1
gene_biotype: protein_coding
description:
  C-terminal processing peptidase; PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); Belongs to the peptidase S41A family.


ensembl_gene_id: Marpi_0525
symbol: AEX84966.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: Marpi_0526
symbol: AEX84967.1
gene_biotype: protein_coding
description:
  PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.


ensembl_gene_id: Marpi_0527
symbol: AEX84968.1
gene_biotype: protein_coding
description:
  ABC-type Fe3+ transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein.


ensembl_gene_id: Marpi_0529
symbol: potA
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter ATP-binding subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: Marpi_0535
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5''-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: Marpi_0538
symbol: AEX84979.1
gene_biotype: protein_coding
description:
  PFAM: Bacteriocin class IId cyclical uberolysin-like; TIGRFAM: circular bacteriocin, circularin A/uberolysin family.


ensembl_gene_id: Marpi_0548
symbol: AEX84989.1
gene_biotype: protein_coding
description:
  Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase; PFAM: Aminotransferase class-V.


ensembl_gene_id: Marpi_0549
symbol: AEX84990.1
gene_biotype: protein_coding
description:
  Phosphoglycerate dehydrogenase-like oxidoreductase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; TIGRFAM: D-3-phosphoglycerate dehydrogenase.


ensembl_gene_id: Marpi_0555
symbol: AEX84996.1
gene_biotype: protein_coding
description:
  PFAM: GGDEF domain; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.


ensembl_gene_id: Marpi_0556
symbol: AEX84997.1
gene_biotype: protein_coding
description:
  ABC-type branched-chain amino acid transport system, periplasmic component; PFAM: Receptor family ligand binding region.


ensembl_gene_id: Marpi_0560
symbol: atpD
gene_biotype: protein_coding
description:
  H(+)-transporting ATP synthase, vacuolar type, subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: Marpi_0561
symbol: atpB
gene_biotype: protein_coding
description:
  Archaeal/vacuolar-type H+-ATPase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.


ensembl_gene_id: Marpi_0562
symbol: atpA
gene_biotype: protein_coding
description:
  Archaeal/vacuolar-type H+-ATPase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: Marpi_0565
symbol: AEX85006.1
gene_biotype: protein_coding
description:
  F0F1-type ATP synthase, subunit c/archaeal/vacuolar-type H+-ATPase, subunit K; PFAM: ATP synthase subunit C.


ensembl_gene_id: Marpi_0569
symbol: AEX85010.1
gene_biotype: protein_coding
description:
  Phosphoesterase, MJ0936 family; PFAM: Calcineurin-like phosphoesterase; TIGRFAM: phosphoesterase, MJ0936 family.


ensembl_gene_id: Marpi_0573
symbol: AEX85014.1
gene_biotype: protein_coding
description:
  Heavy metal-translocating P-type ATPase, Cd/Co/Hg/Pb/Zn-transporting; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase.


ensembl_gene_id: Marpi_0576
symbol: AEX85017.1
gene_biotype: protein_coding
description:
  Phosphomannomutase; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I.


ensembl_gene_id: Marpi_0578
symbol: AEX85019.1
gene_biotype: protein_coding
description:
  Amidohydrolase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase.


ensembl_gene_id: Marpi_0579
symbol: AEX85020.1
gene_biotype: protein_coding
description:
  PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: Marpi_0580
symbol: AEX85021.1
gene_biotype: protein_coding
description:
  PFAM: Amino acid kinase family; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase; Belongs to the aspartokinase family.


ensembl_gene_id: Marpi_0581
symbol: dapH
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate.


ensembl_gene_id: Marpi_0582
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: Marpi_0583
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: Marpi_0584
symbol: AEX85025.1
gene_biotype: protein_coding
description:
  PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase.


ensembl_gene_id: Marpi_0585
symbol: AEX85026.1
gene_biotype: protein_coding
description:
  PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms); Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: Marpi_0595
symbol: AEX85035.1
gene_biotype: protein_coding
description:
  ABC-type uncharacterized transport system, permease component; PFAM: Protein of unknown function (DUF990).


ensembl_gene_id: Marpi_0596
symbol: AEX85036.1
gene_biotype: protein_coding
description:
  HAD hydrolase, subfamily IA; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; HAD superfamily (subfamily IA) hydrolase, TIGR02254.


ensembl_gene_id: Marpi_0598
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: Marpi_0600
symbol: AEX85040.1
gene_biotype: protein_coding
description:
  PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.


ensembl_gene_id: Marpi_0604
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: Marpi_0605
symbol: ftsH
gene_biotype: protein_coding
description:
  ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: Marpi_0609
symbol: AEX85048.1
gene_biotype: protein_coding
description:
  PFAM: Pyrimidine nucleoside phosphorylase C-terminal domain; Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: pyrimidine-nucleoside phosphorylase.


ensembl_gene_id: Marpi_0611
symbol: AEX85050.1
gene_biotype: protein_coding
description:
  Small GTP-binding protein domain protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain.


ensembl_gene_id: Marpi_0622
symbol: AEX85061.1
gene_biotype: protein_coding
description:
  PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit.


ensembl_gene_id: Marpi_0623
symbol: AEX85062.1
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase 27 kD subunit; PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit.


ensembl_gene_id: Marpi_0624
symbol: AEX85063.1
gene_biotype: protein_coding
description:
  PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: Marpi_0625
symbol: AEX85064.1
gene_biotype: protein_coding
description:
  NADPH-dependent glutamate synthase beta chain-like oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase.


ensembl_gene_id: Marpi_0626
symbol: nnrE
gene_biotype: protein_coding
description:
  yjeF-like protein, hydroxyethylthiazole kinase-related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate d [...]


ensembl_gene_id: Marpi_0627
symbol: AEX85066.1
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase specialized sigma subunit, sigma24; PFAM: Sigma-54 factor, Activator interacting domain (AID); Adenosine deaminase z-alpha domain; Sigma-54, DNA binding domain.


ensembl_gene_id: Marpi_0628
symbol: AEX85067.1
gene_biotype: protein_coding
description:
  PFAM: Thiamin pyrophosphokinase, vitamin B1 binding domain; Thiamin pyrophosphokinase, catalytic domain; TIGRFAM: thiamine pyrophosphokinase.


ensembl_gene_id: Marpi_0640
symbol: AEX85078.1
gene_biotype: protein_coding
description:
  PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: Marpi_0644
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...]


ensembl_gene_id: Marpi_0646
symbol: pfp
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.


ensembl_gene_id: Marpi_0648
symbol: AEX85086.1
gene_biotype: protein_coding
description:
  Phosphate transport regulator related to PhoU; PFAM: Protein of unknown function DUF47; TIGRFAM: TIGR00153 family protein.


ensembl_gene_id: Marpi_0651
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: Marpi_0654
symbol: hisS
gene_biotype: protein_coding
description:
  PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase.


ensembl_gene_id: Marpi_0655
symbol: AEX85093.1
gene_biotype: protein_coding
description:
  Trk-type K+ transport system, membrane component; PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family.


ensembl_gene_id: Marpi_0659
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent protease HslVU, ATPase subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: Marpi_0663
symbol: plsY
gene_biotype: protein_coding
description:
  Acyl-phosphate glycerol 3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: Marpi_0664
symbol: der
gene_biotype: protein_coding
description:
  Ribosome-associated GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: Marpi_0666
symbol: ispH
gene_biotype: protein_coding
description:
  (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: Marpi_0668
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: Marpi_0674
symbol: glgB
gene_biotype: protein_coding
description:
  Alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: Marpi_0675
symbol: rbsK
gene_biotype: protein_coding
description:
  Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.


ensembl_gene_id: Marpi_0677
symbol: AEX85115.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: Marpi_0681
symbol: AEX85119.1
gene_biotype: protein_coding
description:
  ABC-type metal ion transport system, periplasmic component/surface adhesin; PFAM: Periplasmic solute binding protein family.


ensembl_gene_id: Marpi_0688
symbol: AEX85126.1
gene_biotype: protein_coding
description:
  PFAM: Response regulator receiver domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.


ensembl_gene_id: Marpi_0690
symbol: AEX85128.1
gene_biotype: protein_coding
description:
  Uncharacterized membrane protein, possible Na+ channel or pump; PFAM: Protein of unknown function (DUF554).


ensembl_gene_id: Marpi_0691
symbol: AEX85129.1
gene_biotype: protein_coding
description:
  Conserved protein of unknown function BmrU; PFAM: Diacylglycerol kinase catalytic domain; TIGRFAM: lipid kinase, YegS/Rv2252/BmrU family.


ensembl_gene_id: Marpi_0692
symbol: AEX85130.1
gene_biotype: protein_coding
description:
  PFAM: Radical SAM superfamily; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein.


ensembl_gene_id: Marpi_0695
symbol: AEX85133.1
gene_biotype: protein_coding
description:
  PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Marpi_0698
symbol: AEX85136.1
gene_biotype: protein_coding
description:
  Putative ABC-type transport system, periplasmic component/surface lipoprotein; PFAM: Basic membrane protein.


ensembl_gene_id: Marpi_0700
symbol: surE
gene_biotype: protein_coding
description:
  5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: Marpi_0701
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: Marpi_0702
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: Marpi_0713
symbol: AEX85147.1
gene_biotype: protein_coding
description:
  Glycogen debranching enzyme GlgX; PFAM: Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); TIGRFAM: glycogen debranching enzyme GlgX; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: Marpi_0714
symbol: AEX85148.1
gene_biotype: protein_coding
description:
  PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-terminal domain; molybdenum cofactor synthesis domain.


ensembl_gene_id: Marpi_0715
symbol: AEX85149.1
gene_biotype: protein_coding
description:
  Chemotaxis protein histidine kinase-like protein; PFAM: CheW-like domain; P2 response regulator binding domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain.


ensembl_gene_id: Marpi_0719
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: Marpi_0720
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: Marpi_0721
symbol: AEX85155.1
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: Marpi_0722
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: Marpi_0723
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: Marpi_0728
symbol: cheD
gene_biotype: protein_coding
description:
  Chemotaxis protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: Marpi_0729
symbol: AEX85163.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor, FliA/WhiG family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: Marpi_0731
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor Mfd; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: Marpi_0742
symbol: panD
gene_biotype: protein_coding
description:
  L-aspartate-alpha-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: Marpi_0743
symbol: tmcAL
gene_biotype: protein_coding
description:
  Putative nucleotidyltransferase; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.


ensembl_gene_id: Marpi_0745
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N'; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: Marpi_0746
symbol: AEX85176.1
gene_biotype: protein_coding
description:
  Flagellin/flagellar hook associated protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: Marpi_0749
symbol: AEX85179.1
gene_biotype: protein_coding
description:
  Periplasmic component of the Tol biopolymer transport system; PFAM: WD40-like Beta Propeller Repeat.


ensembl_gene_id: Marpi_0752
symbol: AEX85182.1
gene_biotype: protein_coding
description:
  2-nitropropane dioxygenase-like enzyme; PFAM: 2-nitropropane dioxygenase; manually curated; non-canonical start codon.


ensembl_gene_id: Marpi_0753
symbol: acpP-2
gene_biotype: protein_coding
description:
  Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.


ensembl_gene_id: Marpi_0757
symbol: AEX85187.1
gene_biotype: protein_coding
description:
  Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor.


ensembl_gene_id: Marpi_0758
symbol: miaB
gene_biotype: protein_coding
description:
  tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: Marpi_0759
symbol: AEX85189.1
gene_biotype: protein_coding
description:
  PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; Belongs to the Orn/Lys/Arg decarboxylase class-II family.


ensembl_gene_id: Marpi_0760
symbol: AEX85190.1
gene_biotype: protein_coding
description:
  tRNA/rRNA cytosine-C5-methylase; PFAM: NOL1/NOP2/sun family; NusB family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB.


ensembl_gene_id: Marpi_0761
symbol: AEX85191.1
gene_biotype: protein_coding
description:
  L-asparaginase/GlutRNAGln amidotransferase subunit D; PFAM: Asparaginase; TIGRFAM: L-asparaginases, type I; L-asparaginases, type II.


ensembl_gene_id: Marpi_0771
symbol: AEX85201.1
gene_biotype: protein_coding
description:
  Cytotoxic translational repressor of toxin-antitoxin stability system; PFAM: Plasmid stabilisation system protein.


ensembl_gene_id: Marpi_0777
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: Marpi_0778
symbol: rpsP
gene_biotype: protein_coding
description:
  PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.


ensembl_gene_id: Marpi_0780
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: Marpi_0781
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: Marpi_0783
symbol: rplS
gene_biotype: protein_coding
description:
  Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: Marpi_0784
symbol: AEX85212.1
gene_biotype: protein_coding
description:
  PFAM: Peptidase S26; Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; Belongs to the peptidase S26 family.


ensembl_gene_id: Marpi_0786
symbol: rsmG
gene_biotype: protein_coding
description:
  16S rRNA (guanine(527)-N(7))-methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: Marpi_0791
symbol: AEX85218.1
gene_biotype: protein_coding
description:
  Permease component of ABC-type sugar transporter; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: Marpi_0792
symbol: AEX85219.1
gene_biotype: protein_coding
description:
  ABC-type sugar transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: Marpi_0797
symbol: AEX85221.1
gene_biotype: protein_coding
description:
  Non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: Marpi_0798
symbol: AEX85222.1
gene_biotype: protein_coding
description:
  PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.


ensembl_gene_id: Marpi_0799
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: Marpi_0801
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA m2A2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: Marpi_0803
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: Marpi_0804
symbol: AEX85228.1
gene_biotype: protein_coding
description:
  PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain.


ensembl_gene_id: Marpi_0810
symbol: yidC
gene_biotype: protein_coding
description:
  Membrane protein insertase, YidC/Oxa1 family, C-terminal domain protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: Marpi_0811
symbol: AEX85235.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: Marpi_0812
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: Marpi_0813
symbol: rpmH
gene_biotype: protein_coding
description:
  PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; Belongs to the bacterial ribosomal protein bL34 family.


ensembl_gene_id: Marpi_0816
symbol: AEX85240.1
gene_biotype: protein_coding
description:
  PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family.


ensembl_gene_id: Marpi_0829
symbol: asnS
gene_biotype: protein_coding
description:
  PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: asparaginyl-tRNA synthetase.


ensembl_gene_id: Marpi_0835
symbol: AEX85252.1
gene_biotype: protein_coding
description:
  ABC-type maltose transport systems, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: Marpi_0843
symbol: AEX85259.1
gene_biotype: protein_coding
description:
  Fused ATPase/permease component of ABC-type transporter involved in cytochrome bd biogenesis; PFAM: ABC transporter.


ensembl_gene_id: Marpi_0845
symbol: AEX85261.1
gene_biotype: protein_coding
description:
  Pyruvate, phosphate dikinase; PFAM: PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: Marpi_0846
symbol: gpsA
gene_biotype: protein_coding
description:
  PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: Marpi_0847
symbol: AEX85263.1
gene_biotype: protein_coding
description:
  Protein with tetrapyrrole methyltransferase and pyrophosphatase domains; PFAM: MazG nucleotide pyrophosphohydrolase domain.


ensembl_gene_id: Marpi_0852
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: Marpi_0853
symbol: rpsD
gene_biotype: protein_coding
description:
  Ribosomal protein S4, bacterial/organelle type; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: Marpi_0854
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: Marpi_0855
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: Marpi_0856
symbol: rpmJ
gene_biotype: protein_coding
description:
  PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type; Belongs to the bacterial ribosomal protein bL36 family.


ensembl_gene_id: Marpi_0857
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: Marpi_0858
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: Marpi_0859
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase family protein; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: Marpi_0860
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: Marpi_0861
symbol: rplO
gene_biotype: protein_coding
description:
  Ribosomal protein L15, bacterial/organelle; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: Marpi_0863
symbol: rpsE
gene_biotype: protein_coding
description:
  Ribosomal protein S5, bacterial/organelle type; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: Marpi_0864
symbol: rplR
gene_biotype: protein_coding
description:
  Ribosomal protein L18, bacterial type; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: Marpi_0865
symbol: rplF
gene_biotype: protein_coding
description:
  Ribosomal protein L6, bacterial type; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: Marpi_0866
symbol: rpsH
gene_biotype: protein_coding
description:
  Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: Marpi_0867
symbol: rpsZ
gene_biotype: protein_coding
description:
  Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.


ensembl_gene_id: Marpi_0868
symbol: rplE
gene_biotype: protein_coding
description:
  Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: Marpi_0869
symbol: rplX
gene_biotype: protein_coding
description:
  Ribosomal protein L24, bacterial/organelle; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: Marpi_0870
symbol: rplN
gene_biotype: protein_coding
description:
  Ribosomal protein L14, bacterial/organelle; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: Marpi_0871
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: Marpi_0872
symbol: rpmC
gene_biotype: protein_coding
description:
  PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.


ensembl_gene_id: Marpi_0873
symbol: rplP
gene_biotype: protein_coding
description:
  Ribosomal protein L16, bacterial/organelle; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: Marpi_0874
symbol: rpsC
gene_biotype: protein_coding
description:
  Ribosomal protein S3, bacterial type; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: Marpi_0875
symbol: rplV
gene_biotype: protein_coding
description:
  Ribosomal protein L22, bacterial type; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: Marpi_0876
symbol: rpsS
gene_biotype: protein_coding
description:
  Ribosomal protein S19, bacterial/organelle; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: Marpi_0877
symbol: rplB
gene_biotype: protein_coding
description:
  Ribosomal protein L2, bacterial/organellar; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: Marpi_0878
symbol: rplW
gene_biotype: protein_coding
description:
  Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: Marpi_0880
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3, bacterial; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: Marpi_0881
symbol: rpsJ
gene_biotype: protein_coding
description:
  Ribosomal protein S10, bacterial/organelle; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: Marpi_0882
symbol: tuf
gene_biotype: protein_coding
description:
  Translation elongation factor TU; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: Marpi_0883
symbol: fusA
gene_biotype: protein_coding
description:
  Translation elongation factor EF-G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF- [...]


ensembl_gene_id: Marpi_0884
symbol: rpsG
gene_biotype: protein_coding
description:
  Ribosomal protein S7, bacterial/organelle; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: Marpi_0885
symbol: rpsL
gene_biotype: protein_coding
description:
  Ribosomal protein S12, bacterial/organelle; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: Marpi_0888
symbol: AEX85304.1
gene_biotype: protein_coding
description:
  Putative enzyme of thiazole biosynthesis; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: Marpi_0889
symbol: AEX85305.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiH-like enzyme; PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: thiazole biosynthesis protein ThiH.


ensembl_gene_id: Marpi_0890
symbol: thiC
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.


ensembl_gene_id: Marpi_0891
symbol: AEX85307.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Phosphomethylpyrimidine kinase; Archaeal phosphomethylpyrimidine kinase.


ensembl_gene_id: Marpi_0895
symbol: AEX85311.1
gene_biotype: protein_coding
description:
  PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; manually curated.


ensembl_gene_id: Marpi_0896
symbol: AEX85312.1
gene_biotype: protein_coding
description:
  Methyl-accepting chemotaxis protein; PFAM: Iron only hydrogenase large subunit, C-terminal domain; Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Marpi_0898
symbol: AEX85314.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial regulatory proteins, tetR family; TIGRFAM: probable dihydroxyacetone kinase regulator.


ensembl_gene_id: Marpi_0905
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: Marpi_0906
symbol: AEX85322.1
gene_biotype: protein_coding
description:
  rRNA methylase, putative, group 3; PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: Marpi_0907
symbol: mrnC
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.


ensembl_gene_id: Marpi_0914
symbol: AEX85329.1
gene_biotype: protein_coding
description:
  ATP-dependent transcriptional regulator; PFAM: Archaeal ATPase; Protein of unknown function (DUF1703).


ensembl_gene_id: Marpi_0918
symbol: AEX85332.1
gene_biotype: protein_coding
description:
  Arylsulfatase regulator (Fe-S oxidoreductase); PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain.


ensembl_gene_id: Marpi_0932
symbol: ribA
gene_biotype: protein_coding
description:
  GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family.  In the N-terminal section; belongs to the DHBP synthase family.


ensembl_gene_id: Marpi_0933
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: Marpi_0934
symbol: AEX85347.1
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: Marpi_0942
symbol: crcB
gene_biotype: protein_coding
description:
  crcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: Marpi_0943
symbol: AEX85356.1
gene_biotype: protein_coding
description:
  Bacterial nucleoid DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: Marpi_0949
symbol: nadK
gene_biotype: protein_coding
description:
  Putative sugar kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: Marpi_0951
symbol: AEX85363.1
gene_biotype: protein_coding
description:
  Pyridoxal phosphate enzyme, YggS family; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: Marpi_0952
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase, RuvB subunit; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: Marpi_0953
symbol: AEX85365.1
gene_biotype: protein_coding
description:
  Putative membrane-associated Zn-dependent protease; PFAM: Peptidase family M50; TIGRFAM: RIP metalloprotease RseP.


ensembl_gene_id: Marpi_0954
symbol: ispG
gene_biotype: protein_coding
description:
  1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: Marpi_0956
symbol: AEX85368.1
gene_biotype: protein_coding
description:
  PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase.


ensembl_gene_id: Marpi_0957
symbol: AEX85369.1
gene_biotype: protein_coding
description:
  Aminoacyl-histidine dipeptidase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: aminoacyl-histidine dipeptidase.


ensembl_gene_id: Marpi_0960
symbol: AEX85372.1
gene_biotype: protein_coding
description:
  Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein; PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain.


ensembl_gene_id: Marpi_0968
symbol: AEX85380.1
gene_biotype: protein_coding
description:
  Fe2+/Zn2+ uptake regulation protein; PFAM: Ferric uptake regulator family; Belongs to the Fur family.


ensembl_gene_id: Marpi_0969
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription termination factor NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: Marpi_0970
symbol: rimP
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: Marpi_0973
symbol: AEX85385.1
gene_biotype: protein_coding
description:
  Putative RNA-binding protein, snRNP like protein; PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA).


ensembl_gene_id: Marpi_0974
symbol: AEX85386.1
gene_biotype: protein_coding
description:
  PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH:flavin oxidoreductase / NADH oxidase family.


ensembl_gene_id: Marpi_0979
symbol: AEX85391.1
gene_biotype: protein_coding
description:
  P-loop ATPase, MinD superfamily; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; 4Fe-4S binding domain.


ensembl_gene_id: Marpi_0982
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: Marpi_0983
symbol: rsmA
gene_biotype: protein_coding
description:
  Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: Marpi_0985
symbol: AEX85397.1
gene_biotype: protein_coding
description:
  RNAse H-fold protein YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: Marpi_0989
symbol: AEX85401.1
gene_biotype: protein_coding
description:
  ATPase with chaperone activity, ATP-binding subunit; PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); Belongs to the ClpA/ClpB family.


ensembl_gene_id: Marpi_0991
symbol: AEX85403.1
gene_biotype: protein_coding
description:
  Flagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: Marpi_0992
symbol: flgI
gene_biotype: protein_coding
description:
  Flagellar basal-body P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: Marpi_0995
symbol: AEX85407.1
gene_biotype: protein_coding
description:
  PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.


ensembl_gene_id: Marpi_0998
symbol: AEX85410.1
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgF; PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body proteins.


ensembl_gene_id: Marpi_0999
symbol: AEX85411.1
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgG; PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body proteins; flagellar basal-body rod protein FlgG, Gram-negative bacteria.


ensembl_gene_id: Marpi_1001
symbol: AEX85413.1
gene_biotype: protein_coding
description:
  Adenosylhomocysteinase; PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase.


ensembl_gene_id: Marpi_1004
symbol: AEX85416.1
gene_biotype: protein_coding
description:
  ABC-type Fe3+-siderophore transport system, permease component; PFAM: FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: Marpi_1005
symbol: AEX85417.1
gene_biotype: protein_coding
description:
  ABC-type Fe3+-hydroxamate transport system, periplasmic component; PFAM: Periplasmic binding protein.


ensembl_gene_id: Marpi_1009
symbol: AEX85421.1
gene_biotype: protein_coding
description:
  Response regulator of the LytR/AlgR family; PFAM: Response regulator receiver domain; LytTr DNA-binding domain.


ensembl_gene_id: Marpi_1010
symbol: AEX85422.1
gene_biotype: protein_coding
description:
  Putative regulator of cell autolysis; PFAM: Histidine kinase; 5TMR of 5TMR-LYT; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.


ensembl_gene_id: Marpi_1013
symbol: AEX85425.1
gene_biotype: protein_coding
description:
  Hydrogenase, Fe-only; PFAM: Iron only hydrogenase large subunit, C-terminal domain; 2Fe-2S iron-sulfur cluster binding domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Iron hydrogenase small subunit; TIGRFAM: hydrogenase, Fe-only.


ensembl_gene_id: Marpi_1014
symbol: AEX85426.1
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit.


ensembl_gene_id: Marpi_1015
symbol: AEX85427.1
gene_biotype: protein_coding
description:
  PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit.


ensembl_gene_id: Marpi_1022
symbol: AEX85434.1
gene_biotype: protein_coding
description:
  Transcriptional regulator/sugar kinase; PFAM: Bacterial regulatory protein, arsR family; ROK family.


ensembl_gene_id: Marpi_1025
symbol: AEX85437.1
gene_biotype: protein_coding
description:
  ABC-type dipeptide transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle.


ensembl_gene_id: Marpi_1026
symbol: AEX85438.1
gene_biotype: protein_coding
description:
  ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: Marpi_1028
symbol: AEX85440.1
gene_biotype: protein_coding
description:
  PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; Belongs to the ABC transporter superfamily.


ensembl_gene_id: Marpi_1036
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: Marpi_1037
symbol: AEX85449.1
gene_biotype: protein_coding
description:
  Glycosyl/glycerophosphate transferase, teichoic acid biosynthesis; PFAM: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase; Glycosyl transferases group 1.


ensembl_gene_id: Marpi_1038
symbol: AEX85450.1
gene_biotype: protein_coding
description:
  PFAM: Cytidylyltransferase; TIGRFAM: cytidyltransferase-related domain; glycerol-3-phosphate cytidylyltransferase.


ensembl_gene_id: Marpi_1049
symbol: AEX85461.1
gene_biotype: protein_coding
description:
  Putative ATP-dependent protease; PFAM: Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: lon-related putative ATP-dependent protease.


ensembl_gene_id: Marpi_1050
symbol: AEX85462.1
gene_biotype: protein_coding
description:
  Site-specific recombinase XerD; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; Belongs to the 'phage' integrase family.


ensembl_gene_id: Marpi_1051
symbol: AEX85463.1
gene_biotype: protein_coding
description:
  PFAM: HD domain; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: uncharacterized domain HDIG.


ensembl_gene_id: Marpi_1053
symbol: AEX85465.1
gene_biotype: protein_coding
description:
  PFAM: Nucleotidyl transferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.


ensembl_gene_id: Marpi_1056
symbol: AEX85468.1
gene_biotype: protein_coding
description:
  TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like.


ensembl_gene_id: Marpi_1058
symbol: AEX85470.1
gene_biotype: protein_coding
description:
  PFAM: Uncharacterized protein family UPF0029; Domain of unknown function (DUF1949); TIGRFAM: uncharacterized protein, YigZ family.


ensembl_gene_id: Marpi_1059
symbol: AEX85471.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: Marpi_1060
symbol: AEX85472.1
gene_biotype: protein_coding
description:
  Putative domain HDIG-containing protein; PFAM: HD domain; OB-fold nucleic acid binding domain; TIGRFAM: uncharacterized domain HDIG.


ensembl_gene_id: Marpi_1061
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I, bacterial; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removi [...]


ensembl_gene_id: Marpi_1062
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: Marpi_1066
symbol: AEX85478.1
gene_biotype: protein_coding
description:
  Phosphosulfolactate phosphohydrolase-like enzyme; PFAM: 2-phosphosulpholactate phosphatase; Belongs to the ComB family.


ensembl_gene_id: Marpi_1067
symbol: AEX85479.1
gene_biotype: protein_coding
description:
  Parvulin-like peptidyl-prolyl isomerase; PFAM: Fibronectin-binding protein (FBP); PPIC-type PPIASE domain.


ensembl_gene_id: Marpi_1073
symbol: rlmH
gene_biotype: protein_coding
description:
  Hypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: Marpi_1076
symbol: AEX85488.1
gene_biotype: protein_coding
description:
  Periplasmic component of amino acid ABC-type transporter/signal transduction system; PFAM: Bacterial extracellular solute-binding proteins, family 3.


ensembl_gene_id: Marpi_1078
symbol: panB
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: Marpi_1079
symbol: AEX85491.1
gene_biotype: protein_coding
description:
  PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region; manually curated; non-canonical start codon.


ensembl_gene_id: Marpi_1080
symbol: AEX85492.1
gene_biotype: protein_coding
description:
  PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: Marpi_1083
symbol: AEX85495.1
gene_biotype: protein_coding
description:
  Flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: Marpi_1086
symbol: AEX85498.1
gene_biotype: protein_coding
description:
  Flagellar protein export ATPase FliI; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family; flagellar protein export ATPase FliI.


ensembl_gene_id: Marpi_1090
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA isopentenyltransferase MiaA; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: Marpi_1091
symbol: hfq
gene_biotype: protein_coding
description:
  RNA chaperone Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: Marpi_1092
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: Marpi_1094
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: Marpi_1096
symbol: AEX85508.1
gene_biotype: protein_coding
description:
  PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain.


ensembl_gene_id: Marpi_1100
symbol: pdxT
gene_biotype: protein_coding
description:
  Pyridoxal 5''-phosphate synthase, glutaminase subunit Pdx2; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.


ensembl_gene_id: Marpi_1101
symbol: pdxS
gene_biotype: protein_coding
description:
  Pyridoxal 5''-phosphate synthase, synthase subunit Pdx1; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.


ensembl_gene_id: Marpi_1103
symbol: AEX85515.1
gene_biotype: protein_coding
description:
  PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase.


ensembl_gene_id: Marpi_1111
symbol: AEX85523.1
gene_biotype: protein_coding
description:
  NAD(FAD)-dependent dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain.


ensembl_gene_id: Marpi_1117
symbol: AEX85529.1
gene_biotype: protein_coding
description:
  PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase (subfamily 1) family protein.


ensembl_gene_id: Marpi_1121
symbol: AEX85533.1
gene_biotype: protein_coding
description:
  Putative esterase of the alpha-beta hydrolase superfamily; PFAM: Patatin-like phospholipase; manually curated; non-canonical start codon.


ensembl_gene_id: Marpi_1126
symbol: AEX85538.1
gene_biotype: protein_coding
description:
  PFAM: Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, beta subunit.


ensembl_gene_id: Marpi_1127
symbol: AEX85539.1
gene_biotype: protein_coding
description:
  PFAM: Serine dehydratase alpha chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, alpha subunit.


ensembl_gene_id: Marpi_1128
symbol: AEX85540.1
gene_biotype: protein_coding
description:
  Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.


ensembl_gene_id: Marpi_1135
symbol: AEX85546.1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; PFAM: Glycosyltransferase family 28 C-terminal domain; Glycosyltransferase family 28 N-terminal domain.


ensembl_gene_id: Marpi_1137
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: Marpi_1138
symbol: AEX85549.1
gene_biotype: protein_coding
description:
  UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; PFAM: Bacterial transferase hexapeptide (three repeats).


ensembl_gene_id: Marpi_1140
symbol: AEX85551.1
gene_biotype: protein_coding
description:
  PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3.


ensembl_gene_id: Marpi_1142
symbol: AEX85553.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor synthesis domain protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: Marpi_1143
symbol: AEX85554.1
gene_biotype: protein_coding
description:
  Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.


ensembl_gene_id: Marpi_1144
symbol: AEX85555.1
gene_biotype: protein_coding
description:
  Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain.


ensembl_gene_id: Marpi_1145
symbol: AEX85556.1
gene_biotype: protein_coding
description:
  Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein; PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain.


ensembl_gene_id: Marpi_1152
symbol: AEX85562.1
gene_biotype: protein_coding
description:
  PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family; Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: Marpi_1158
symbol: smc
gene_biotype: protein_coding
description:
  Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: Marpi_1160
symbol: AEX85570.1
gene_biotype: protein_coding
description:
  Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain.


ensembl_gene_id: Marpi_1174
symbol: AEX85584.1
gene_biotype: protein_coding
description:
  Membrane protein involved in the export of O-antigen and teichoic acid; PFAM: Polysaccharide biosynthesis protein.


ensembl_gene_id: Marpi_1177
symbol: AEX85587.1
gene_biotype: protein_coding
description:
  Putative Fe-S oxidoreductase; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain.


ensembl_gene_id: Marpi_1185
symbol: fcl
gene_biotype: protein_coding
description:
  Nucleoside-diphosphate-sugar epimerase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.


ensembl_gene_id: Marpi_1186
symbol: gmd
gene_biotype: protein_coding
description:
  GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.


ensembl_gene_id: Marpi_1196
symbol: AEX85601.1
gene_biotype: protein_coding
description:
  Isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase; PFAM: Bacterial transferase hexapeptide (three repeats).


ensembl_gene_id: Marpi_1198
symbol: AEX85603.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; Undecaprenyl-phosphate galactose phosphotransferase, WbaP; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.


ensembl_gene_id: Marpi_1199
symbol: cysS
gene_biotype: protein_coding
description:
  PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: Marpi_1202
symbol: AEX85607.1
gene_biotype: protein_coding
description:
  Serine phosphatase RsbU, regulator of sigma subunit; PFAM: Response regulator receiver domain; Stage II sporulation protein E (SpoIIE).


ensembl_gene_id: Marpi_1203
symbol: AEX85608.1
gene_biotype: protein_coding
description:
  Cytidine deaminase, homotetrameric; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: Marpi_1204
symbol: AEX85609.1
gene_biotype: protein_coding
description:
  CBS domain-containing protein; PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain.


ensembl_gene_id: Marpi_1205
symbol: AEX85610.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Uncharacterized BCR, YitT family COG1284; Uncharacterized protein conserved in bacteria (DUF2179).


ensembl_gene_id: Marpi_1206
symbol: dnaJ
gene_biotype: protein_coding
description:
  Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]


ensembl_gene_id: Marpi_1207
symbol: grpE
gene_biotype: protein_coding
description:
  Molecular chaperone GrpE (heat shock protein); Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle.  [...]


ensembl_gene_id: Marpi_1208
symbol: hrcA
gene_biotype: protein_coding
description:
  Transcriptional regulator of heat shock gene; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: Marpi_1209
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramyl-tripeptide synthetase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.


ensembl_gene_id: Marpi_1210
symbol: AEX85615.1
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; PFAM: Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase.


ensembl_gene_id: Marpi_1211
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: Marpi_1213
symbol: AEX85618.1
gene_biotype: protein_coding
description:
  Addiction module toxin, RelE/StbE family; PFAM: Plasmid maintenance system killer protein; TIGRFAM: addiction module toxin, RelE/StbE family.


ensembl_gene_id: Marpi_1216
symbol: AEX85621.1
gene_biotype: protein_coding
description:
  Fructose-1,6-bisphosphatase, class II; PFAM: Bacterial fructose-1,6-bisphosphatase, glpX-encoded; TIGRFAM: fructose-1,6-bisphosphatase, class II.


ensembl_gene_id: Marpi_1220
symbol: AEX85625.1
gene_biotype: protein_coding
description:
  Capsular exopolysaccharide biosynthesis protein; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family.


ensembl_gene_id: Marpi_1222
symbol: AEX85627.1
gene_biotype: protein_coding
description:
  Uncharacterized protein involved in exopolysaccharide biosynthesis; PFAM: Chain length determinant protein.


ensembl_gene_id: Marpi_1232
symbol: AEX85636.1
gene_biotype: protein_coding
description:
  Putative kinase, galactokinase/mevalonate kinase; PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain.


ensembl_gene_id: Marpi_1233
symbol: gmhA
gene_biotype: protein_coding
description:
  Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate; Belongs to the SIS family. GmhA subfamily.


ensembl_gene_id: Marpi_1234
symbol: AEX85638.1
gene_biotype: protein_coding
description:
  PFAM: Polynucleotide kinase 3 phosphatase; Nucleotidyl transferase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family domain.


ensembl_gene_id: Marpi_1242
symbol: AEX85646.1
gene_biotype: protein_coding
description:
  Undecaprenyl-phosphate galactose phosphotransferase; PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Undecaprenyl-phosphate galactose phosphotransferase, WbaP.


ensembl_gene_id: Marpi_1256
symbol: AEX85660.1
gene_biotype: protein_coding
description:
  dTDP-D-glucose 4,6-dehydratase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: GDP-mannose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase.


ensembl_gene_id: Marpi_1257
symbol: AEX85661.1
gene_biotype: protein_coding
description:
  Putative PLP-dependent enzyme possibly involved in cell wall biogenesis; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: Marpi_1258
symbol: AEX85662.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.


ensembl_gene_id: Marpi_1263
symbol: AEX85667.1
gene_biotype: protein_coding
description:
  UDP-glucose-4-epimerase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.


ensembl_gene_id: Marpi_1264
symbol: AEX85668.1
gene_biotype: protein_coding
description:
  PFAM: Prokaryotic N-terminal methylation motif; Bacterial type II secretion system protein G; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.


ensembl_gene_id: Marpi_1268
symbol: gatB
gene_biotype: protein_coding
description:
  glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: Marpi_1269
symbol: gatA
gene_biotype: protein_coding
description:
  glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: Marpi_1270
symbol: AEX85673.1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis/type III secretory pathway protein; PFAM: Putative transposase, YhgA-like; TIGRFAM: conserved hypothetical protein (putative transposase or invertase).


ensembl_gene_id: Marpi_1273
symbol: AEX85676.1
gene_biotype: protein_coding
description:
  Transcriptional regulator/sugar kinase; PFAM: ROK family; TIGRFAM: ROK family protein (putative glucokinase).


ensembl_gene_id: Marpi_1274
symbol: AEX85677.1
gene_biotype: protein_coding
description:
  PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase.


ensembl_gene_id: Marpi_1275
symbol: nfo
gene_biotype: protein_coding
description:
  Apurinic endonuclease APN1; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.


ensembl_gene_id: Marpi_1280
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: Marpi_1292
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: Marpi_1295
symbol: AEX85698.1
gene_biotype: protein_coding
description:
  DNA polymerase elongation subunit (family B); PFAM: DNA polymerase family B; DNA polymerase family B, exonuclease domain.


ensembl_gene_id: Marpi_1296
symbol: AEX85699.1
gene_biotype: protein_coding
description:
  PFAM: Homoserine dehydrogenase, NAD binding domain; Domain of unknown function DUF108; TIGRFAM: aspartate dehydrogenase.


ensembl_gene_id: Marpi_1297
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: Marpi_1298
symbol: AEX85701.1
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family.


ensembl_gene_id: Marpi_1300
symbol: AEX85703.1
gene_biotype: protein_coding
description:
  FeS assembly protein SufB; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB.


ensembl_gene_id: Marpi_1302
symbol: AEX85705.1
gene_biotype: protein_coding
description:
  Cysteine desulfurase-like protein, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.


ensembl_gene_id: Marpi_1306
symbol: AEX85709.1
gene_biotype: protein_coding
description:
  5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase; PFAM: Calcineurin-like phosphoesterase; 5'-nucleotidase, C-terminal domain; Belongs to the 5'-nucleotidase family.


ensembl_gene_id: Marpi_1311
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: Marpi_1314
symbol: AEX85717.1
gene_biotype: protein_coding
description:
  DNA repair protein radc; PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; Belongs to the UPF0758 family.


ensembl_gene_id: Marpi_1315
symbol: AEX85718.1
gene_biotype: protein_coding
description:
  MAF protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: Marpi_1318
symbol: AEX85721.1
gene_biotype: protein_coding
description:
  Membrane-associated lipoprotein involved in thiamine biosynthesis; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: Marpi_1321
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine 55 synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: Marpi_1322
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: Marpi_1326
symbol: AEX85729.1
gene_biotype: protein_coding
description:
  Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component; PFAM: Pyridine nucleotide-disulphide oxidoreductase.


ensembl_gene_id: Marpi_1330
symbol: AEX85733.1
gene_biotype: protein_coding
description:
  Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain.


ensembl_gene_id: Marpi_1333
symbol: AEX85736.1
gene_biotype: protein_coding
description:
  PFAM: Phosphorylase superfamily; TIGRFAM: purine-nucleoside phosphorylase, family 1 (deoD); uridine phosphorylase.


ensembl_gene_id: Marpi_1342
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: Marpi_1345
symbol: AEX85748.1
gene_biotype: protein_coding
description:
  Putative nucleoside-diphosphate sugar epimerase; PFAM: CoA binding domain; Polysaccharide biosynthesis protein.


ensembl_gene_id: Marpi_1346
symbol: AEX85749.1
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; PFAM: Glycosyl transferase family 4.


ensembl_gene_id: Marpi_1350
symbol: AEX85753.1
gene_biotype: protein_coding
description:
  PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: Marpi_1351
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: Marpi_1365
symbol: recA
gene_biotype: protein_coding
description:
  Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: Marpi_1366
symbol: AEX85766.1
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: Marpi_1367
symbol: AEX85767.1
gene_biotype: protein_coding
description:
  PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: Marpi_1368
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: Marpi_1371
symbol: AEX85771.1
gene_biotype: protein_coding
description:
  PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: Marpi_1374
symbol: AEX85774.1
gene_biotype: protein_coding
description:
  Type II secretory pathway, component PulF; PFAM: Bacterial type II secretion system protein F domain.


ensembl_gene_id: Marpi_1379
symbol: AEX85779.1
gene_biotype: protein_coding
description:
  Type II secretory pathway, component PulD; PFAM: Bacterial type II and III secretion system protein; Belongs to the bacterial secretin family.


ensembl_gene_id: Marpi_1383
symbol: glyQ
gene_biotype: protein_coding
description:
  PFAM: Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, alpha subunit.


ensembl_gene_id: Marpi_1384
symbol: glyS
gene_biotype: protein_coding
description:
  PFAM: Glycyl-tRNA synthetase beta subunit; DALR anticodon binding domain; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, beta subunit.


ensembl_gene_id: Marpi_1386
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: Marpi_1395
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: Marpi_1396
symbol: AEX85796.1
gene_biotype: protein_coding
description:
  PP-loop superfamily ATP-utilizing enzyme; PFAM: NAD synthase; manually curated; non-canonical start codon.


ensembl_gene_id: Marpi_1400
symbol: AEX85799.1
gene_biotype: protein_coding
description:
  PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.


ensembl_gene_id: Marpi_1402
symbol: AEX85801.1
gene_biotype: protein_coding
description:
  Cell division protein FtsI/penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2.


ensembl_gene_id: Marpi_1406
symbol: ruvC
gene_biotype: protein_coding
description:
  Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: Marpi_1410
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.


ensembl_gene_id: Marpi_1411
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: Marpi_1413
symbol: AEX85812.1
gene_biotype: protein_coding
description:
  Uncharacterized protein, YfiH family; PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: uncharacterized protein, YfiH family; Belongs to the multicopper oxidase YfiH/RL5 family.


ensembl_gene_id: Marpi_1414
symbol: nadE
gene_biotype: protein_coding
description:
  NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: Marpi_1426
symbol: AEX85821.1
gene_biotype: protein_coding
description:
  PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain.


ensembl_gene_id: Marpi_1429
symbol: AEX85824.1
gene_biotype: protein_coding
description:
  PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist.


ensembl_gene_id: Marpi_1430
symbol: AEX85825.1
gene_biotype: protein_coding
description:
  Signal transduction histidine kinase, nitrogen specific; PFAM: Protein of unknown function (DUF3214).


ensembl_gene_id: Marpi_1432
symbol: coaX
gene_biotype: protein_coding
description:
  Pantothenate kinase, type III; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: Marpi_1433
symbol: AEX85828.1
gene_biotype: protein_coding
description:
  Sua5/YciO/YrdC/YwlC family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: Marpi_1437
symbol: AEX85832.1
gene_biotype: protein_coding
description:
  Hypothetical protein, contains double-stranded beta-helix domain; PFAM: Cupin domain; Helix-turn-helix.


ensembl_gene_id: Marpi_1438
symbol: speH
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.


ensembl_gene_id: Marpi_1439
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine; Belongs to the spermidine/spermine synthase family.


ensembl_gene_id: Marpi_1446
symbol: AEX85841.1
gene_biotype: protein_coding
description:
  Molecular chaperone (small heat shock protein); PFAM: Hsp20/alpha crystallin family; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: Marpi_1453
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: Marpi_1454
symbol: AEX85849.1
gene_biotype: protein_coding
description:
  Putative Zn-dependent peptidase; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16).


ensembl_gene_id: Marpi_1463
symbol: AEX85858.1
gene_biotype: protein_coding
description:
  Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: Marpi_1464
symbol: AEX85859.1
gene_biotype: protein_coding
description:
  Putative dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain.


ensembl_gene_id: Marpi_1465
symbol: hpf
gene_biotype: protein_coding
description:
  Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: Marpi_1469
symbol: ade
gene_biotype: protein_coding
description:
  Adenine deaminase; PFAM: Amidohydrolase family; TIGRFAM: adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.


ensembl_gene_id: Marpi_1476
symbol: AEX85871.1
gene_biotype: protein_coding
description:
  Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities; PFAM: Aminotransferase class I and II.


ensembl_gene_id: Marpi_1478
symbol: AEX85873.1
gene_biotype: protein_coding
description:
  PFAM: Galactose-1-phosphate uridyl transferase, N-terminal domain; TIGRFAM: galactose-1-phosphate uridylyltransferase, family 1.


ensembl_gene_id: Marpi_1490
symbol: AEX85885.1
gene_biotype: protein_coding
description:
  Alpha-amylase/alpha-mannosidase; PFAM: Starch binding domain; Glycosyl hydrolase family 57; Domain of unknown function (DUF2223).


ensembl_gene_id: Marpi_1491
symbol: panC
gene_biotype: protein_coding
description:
  Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: Marpi_1495
symbol: AEX85890.1
gene_biotype: protein_coding
description:
  ABC-type molybdate transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: tungstate ABC transporter binding protein WtpA.


ensembl_gene_id: Marpi_1497
symbol: AEX85892.1
gene_biotype: protein_coding
description:
  ABC-type sulfate transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: Marpi_1498
symbol: AEX85893.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: Marpi_1499
symbol: moaC
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: Marpi_1503
symbol: aroK
gene_biotype: protein_coding
description:
  3-dehydroquinate synthetase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: Marpi_1504
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: Marpi_1516
symbol: AEX85910.1
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: Marpi_1518
symbol: AEX85912.1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis pathway, component FlhB; PFAM: Ribose 5-phosphate isomerase A (phosphoriboisomerase A); FlhB HrpN YscU SpaS Family; TIGRFAM: flhB C-terminus-related protein.


ensembl_gene_id: Marpi_1524
symbol: AEX85918.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: Marpi_1530
symbol: AEX85924.1
gene_biotype: protein_coding
description:
  PFAM: Glycosyl transferase WecB/TagA/CpsF family; TIGRFAM: bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family; Belongs to the glycosyltransferase 26 family.


ensembl_gene_id: Marpi_1531
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: Marpi_1532
symbol: engB
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTP-binding protein YsxC/EngB; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: Marpi_1537
symbol: AEX85931.1
gene_biotype: protein_coding
description:
  Putative cobalamin binding protein; PFAM: D-Lysine 5,6-aminomutase alpha subunit; B12 binding domain.


ensembl_gene_id: Marpi_1546
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: Marpi_1548
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: Marpi_1550
symbol: hslV
gene_biotype: protein_coding
description:
  ATP-dependent protease HslVU, peptidase subunit; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: Marpi_1554
symbol: AEX85944.1
gene_biotype: protein_coding
description:
  TIGR00255 family protein; PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: TIGR00255 family protein.


ensembl_gene_id: Marpi_1557
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, subunit K/omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: Marpi_1561
symbol: AEX85951.1
gene_biotype: protein_coding
description:
  Putative amidophosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein.


ensembl_gene_id: Marpi_1563
symbol: AEX85953.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Domain of unknown function (DUF1957); Glycosyl hydrolase family 57; Belongs to the glycosyl hydrolase 57 family.


ensembl_gene_id: Marpi_1565
symbol: AEX85955.1
gene_biotype: protein_coding
description:
  PFAM: 4Fe-4S binding domain; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family.


ensembl_gene_id: Marpi_1569
symbol: AEX85959.1
gene_biotype: protein_coding
description:
  PFAM: Pterin binding enzyme; B12 binding domain; Homocysteine S-methyltransferase; TIGRFAM: methylmalonyl-CoA mutase C-terminal domain.


ensembl_gene_id: Marpi_1574
symbol: cheB
gene_biotype: protein_coding
description:
  Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: Marpi_1576
symbol: AEX85966.1
gene_biotype: protein_coding
description:
  2-oxoacid:ferredoxin oxidoreductase, gamma subunit; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase.


ensembl_gene_id: Marpi_1579
symbol: AEX85969.1
gene_biotype: protein_coding
description:
  Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: Marpi_1581
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: Marpi_1582
symbol: AEX85972.1
gene_biotype: protein_coding
description:
  Periplasmic protease; PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc).


ensembl_gene_id: Marpi_1584
symbol: AEX85974.1
gene_biotype: protein_coding
description:
  PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; Belongs to the ribF family.


ensembl_gene_id: Marpi_1585
symbol: pfp-2
gene_biotype: protein_coding
description:
  Phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.


ensembl_gene_id: Marpi_1589
symbol: atpB-2
gene_biotype: protein_coding
description:
  F0F1-type ATP synthase, alpha subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.


ensembl_gene_id: Marpi_1590
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase, F0 subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: Marpi_1591
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase, F0 subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: Marpi_1592
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase, F1 delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family.


ensembl_gene_id: Marpi_1593
symbol: atpA-2
gene_biotype: protein_coding
description:
  Proton translocating ATP synthase, F1 alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: Marpi_1594
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase, F1 gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: Marpi_1595
symbol: atpD-2
gene_biotype: protein_coding
description:
  ATP synthase, F1 beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: Marpi_1596
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase, F1 epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: Marpi_1597
symbol: AEX85987.1
gene_biotype: protein_coding
description:
  PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.


ensembl_gene_id: Marpi_1600
symbol: AEX85990.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial trigger factor protein (TF) C-terminus; Bacterial trigger factor protein (TF); TIGRFAM: trigger factor.


ensembl_gene_id: Marpi_1601
symbol: AEX85991.1
gene_biotype: protein_coding
description:
  Transcriptional accessory protein; PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region.


ensembl_gene_id: Marpi_1603
symbol: fliE
gene_biotype: protein_coding
description:
  PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE.


ensembl_gene_id: Marpi_1604
symbol: AEX85994.1
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgC; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; flagellar basal-body rod protein FlgB; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: Marpi_1605
symbol: AEX85995.1
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: Marpi_1606
symbol: AEX85996.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Polysaccharide pyruvyl transferase; TIGRFAM: polysaccharide pyruvyl transferase CsaB.


ensembl_gene_id: Marpi_1609
symbol: AEX85999.1
gene_biotype: protein_coding
description:
  ATPase involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: Marpi_1611
symbol: mtnA
gene_biotype: protein_coding
description:
  S-methyl-5-thioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: Marpi_1624
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: Marpi_1626
symbol: AEX86015.1
gene_biotype: protein_coding
description:
  8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.


ensembl_gene_id: Marpi_1627
symbol: AEX86016.1
gene_biotype: protein_coding
description:
  Theronine dehydrogenase-like Zn-dependent dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: L-threonine 3-dehydrogenase; 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.


ensembl_gene_id: Marpi_1630
symbol: AEX86019.1
gene_biotype: protein_coding
description:
  Membrane carboxypeptidase (penicillin-binding protein); PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase.


ensembl_gene_id: Marpi_1631
symbol: AEX86020.1
gene_biotype: protein_coding
description:
  Radical SAM-linked protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2344); TIGRFAM: radical SAM-linked protein.


ensembl_gene_id: Marpi_1636
symbol: AEX86025.1
gene_biotype: protein_coding
description:
  Methylase of chemotaxis methyl-accepting protein; PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain.


ensembl_gene_id: Marpi_1637
symbol: lspA
gene_biotype: protein_coding
description:
  Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: Marpi_1638
symbol: AEX86027.1
gene_biotype: protein_coding
description:
  Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: Marpi_1639
symbol: AEX86028.1
gene_biotype: protein_coding
description:
  Putative metal-binding protein, possibly nucleic-acid binding protein; PFAM: Uncharacterized ACR, COG1399.


ensembl_gene_id: Marpi_1640
symbol: rpmF
gene_biotype: protein_coding
description:
  PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.


ensembl_gene_id: Marpi_1641
symbol: plsX
gene_biotype: protein_coding
description:
  Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: Marpi_1642
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: Marpi_1643
symbol: rsfS
gene_biotype: protein_coding
description:
  Iojap-like ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: Marpi_1644
symbol: rpsB
gene_biotype: protein_coding
description:
  PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; Belongs to the universal ribosomal protein uS2 family.


ensembl_gene_id: Marpi_1646
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin 5''-phosphate synthase/cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: Marpi_1647
symbol: AEX86036.1
gene_biotype: protein_coding
description:
  Alpha-ribazole phosphatase; PFAM: Phosphoglycerate mutase family; TIGRFAM: alpha-ribazole phosphatase.


ensembl_gene_id: Marpi_1664
symbol: AEX86053.1
gene_biotype: protein_coding
description:
  ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component; PFAM: Uncharacterized conserved protein (DUF2249); Domain of unknown function (DUF1858).


ensembl_gene_id: Marpi_1665
symbol: rplU
gene_biotype: protein_coding
description:
  Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: Marpi_1667
symbol: rpmA
gene_biotype: protein_coding
description:
  PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.


ensembl_gene_id: Marpi_1668
symbol: AEX86057.1
gene_biotype: protein_coding
description:
  Putative membrane protein; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family.


ensembl_gene_id: Marpi_1669
symbol: rplM
gene_biotype: protein_coding
description:
  Ribosomal protein L13, bacterial type; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: Marpi_1671
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase, catalytic core; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: Marpi_1672
symbol: sigA
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor, sigma-70 family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: Marpi_1674
symbol: AEX86063.1
gene_biotype: protein_coding
description:
  PFAM: Amino acid permease; TIGRFAM: transporter, basic amino acid/polyamine antiporter (APA) family.


ensembl_gene_id: Marpi_1689
symbol: AEX86078.1
gene_biotype: protein_coding
description:
  PFAM: HD domain; PAS fold; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: PAS domain S-box.


ensembl_gene_id: Marpi_1694
symbol: pepT
gene_biotype: protein_coding
description:
  Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.


ensembl_gene_id: Marpi_1701
symbol: rpsO
gene_biotype: protein_coding
description:
  Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: Marpi_1702
symbol: AEX86091.1
gene_biotype: protein_coding
description:
  Cytosine deaminase-like metal-dependent hydrolase; PFAM: Amidohydrolase family; TIGRFAM: putative selenium metabolism protein SsnA.


ensembl_gene_id: Marpi_1703
symbol: AEX86092.1
gene_biotype: protein_coding
description:
  Dihydroorotase-like cyclic amidohydrolase; PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type.


ensembl_gene_id: Marpi_1704
symbol: AEX86093.1
gene_biotype: protein_coding
description:
  PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase; probable carbamoyltransferase YgeW; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.


ensembl_gene_id: Marpi_1705
symbol: AEX86094.1
gene_biotype: protein_coding
description:
  PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: putative selenium metabolism hydrolase; M20/DapE family protein YgeY.


ensembl_gene_id: Marpi_1709
symbol: AEX86097.1
gene_biotype: protein_coding
description:
  DNA/RNA helicase, superfamily II, SNF2 family; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain.


ensembl_gene_id: Marpi_1712
symbol: rpmG
gene_biotype: protein_coding
description:
  PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type; Belongs to the bacterial ribosomal protein bL33 family.


ensembl_gene_id: Marpi_1713
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: Marpi_1714
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antiterminator; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: Marpi_1715
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: Marpi_1716
symbol: rplA
gene_biotype: protein_coding
description:
  Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: Marpi_1717
symbol: rplJ
gene_biotype: protein_coding
description:
  Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: Marpi_1718
symbol: rplL
gene_biotype: protein_coding
description:
  Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: Marpi_1719
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: Marpi_1720
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, beta' subunit/160 kD subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: Marpi_1721
symbol: AEX86107.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: ABC transporter periplasmic binding protein, thiB subfamily.


ensembl_gene_id: Marpi_1729
symbol: AEX86115.1
gene_biotype: protein_coding
description:
  Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis; PFAM: MoeZ/MoeB domain; ThiF family.


ensembl_gene_id: Marpi_1732
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.


ensembl_gene_id: Marpi_1733
symbol: AEX86119.1
gene_biotype: protein_coding
description:
  Protein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: Marpi_1742
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: Marpi_1743
symbol: AEX86129.1
gene_biotype: protein_coding
description:
  Putative nucleic-acid-binding protein (contains the HHH domain); PFAM: DisA bacterial checkpoint controller nucleotide-binding; DisA bacterial checkpoint controller linker region; Helix-hairpin-helix motif; Belongs to the DisA family.


ensembl_gene_id: Marpi_1744
symbol: AEX86130.1
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: Marpi_1750
symbol: polC
gene_biotype: protein_coding
description:
  DNA polymerase III, alpha chain; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: Marpi_1754
symbol: AEX86140.1
gene_biotype: protein_coding
description:
  Enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase; PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain.


ensembl_gene_id: Marpi_1758
symbol: AEX86144.1
gene_biotype: protein_coding
description:
  PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I.


ensembl_gene_id: Marpi_1767
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: Marpi_1768
symbol: AEX86150.1
gene_biotype: protein_coding
description:
  PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.


ensembl_gene_id: Marpi_1769
symbol: rplT
gene_biotype: protein_coding
description:
  Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: Marpi_1771
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: Marpi_1772
symbol: AEX86153.1
gene_biotype: protein_coding
description:
  Folylpolyglutamate synthase/dihydrofolate synthase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: Marpi_1773
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction resolvasome, DNA-binding subunit; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: Marpi_1774
symbol: glmU
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: Marpi_1775
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: Marpi_1776
symbol: rplY
gene_biotype: protein_coding
description:
  Ribosomal protein L25, Ctc-form; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: Marpi_1777
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: Marpi_1781
symbol: AEX86162.1
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family.


ensembl_gene_id: Marpi_1784
symbol: AEX86165.1
gene_biotype: protein_coding
description:
  Glycosidase; PFAM: Alpha amylase, N-terminal ig-like domain; Alpha amylase, catalytic domain; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: Marpi_1790
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator (could also regulate swarming and quorum sensing); A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.


ensembl_gene_id: Marpi_1791
symbol: fliW
gene_biotype: protein_coding
description:
  Hypothetical protein; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.


ensembl_gene_id: Marpi_1792
symbol: AEX86173.1
gene_biotype: protein_coding
description:
  Flagellar hook-associated protein 3; PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; TIGRFAM: flagellar hook-associated protein 3.


ensembl_gene_id: Marpi_1793
symbol: AEX86174.1
gene_biotype: protein_coding
description:
  Flagellar hook-associated protein FlgK; PFAM: Domain of unknown function (DUF1078); TIGRFAM: flagellar hook-associated protein FlgK.


ensembl_gene_id: Marpi_1796
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: Marpi_1797
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase alpha subunit; PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: Marpi_1801
symbol: tal
gene_biotype: protein_coding
description:
  Fructose-6-phosphate aldolase, TalC/MipB family; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: Marpi_1808
symbol: secF
gene_biotype: protein_coding
description:
  Protein-export membrane protein, SecD/SecF family; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: Marpi_1816
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional regulator NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: Marpi_1817
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: Marpi_1818
symbol: lysS
gene_biotype: protein_coding
description:
  lysyl-tRNA synthetase (class II); PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: Marpi_1819
symbol: rpmB
gene_biotype: protein_coding
description:
  PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.


ensembl_gene_id: Marpi_1827
symbol: AEX86208.1
gene_biotype: protein_coding
description:
  5,10-methenyltetrahydrofolate synthetase; PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase.


ensembl_gene_id: Marpi_1829
symbol: AEX86210.1
gene_biotype: protein_coding
description:
  Glycoside hydrolase, end-alpha-1,4-polygalactosaminidase; PFAM: TM1410 hypothetical-related protein; TIGRFAM: possible cysteinyl-tRNA synthetase, Methanococcus type.


ensembl_gene_id: Marpi_1831
symbol: uppP
gene_biotype: protein_coding
description:
  Putative bacitracin resistance protein; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: Marpi_1838
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: Marpi_1839
symbol: AEX86220.1
gene_biotype: protein_coding
description:
  DNA/RNA helicase, superfamily II; PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase; Belongs to the DEAD box helicase family.


ensembl_gene_id: Marpi_1842
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: Marpi_1844
symbol: AEX86225.1
gene_biotype: protein_coding
description:
  3D domain-containing protein,LysM domain-containing protein; PFAM: 3D domain; Peptidase family M23; LysM domain.


ensembl_gene_id: Marpi_1846
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: Marpi_1847
symbol: coaD
gene_biotype: protein_coding
description:
  Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: Marpi_1848
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: Marpi_1850
symbol: eno
gene_biotype: protein_coding
description:
  Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: Marpi_1855
symbol: minC
gene_biotype: protein_coding
description:
  Septum formation inhibitor; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: Marpi_1859
symbol: AEX86240.1
gene_biotype: protein_coding
description:
  methylmalonyl-CoA epimerase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: methylmalonyl-CoA epimerase.


ensembl_gene_id: Marpi_1860
symbol: AEX86241.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta); PFAM: Carboxyl transferase domain.


ensembl_gene_id: Marpi_1864
symbol: AEX86245.1
gene_biotype: protein_coding
description:
  Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein; PFAM: short chain dehydrogenase.


ensembl_gene_id: Marpi_1865
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: Marpi_1867
symbol: AEX86248.1
gene_biotype: protein_coding
description:
  PAS domain S-box; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box.


ensembl_gene_id: Marpi_1869
symbol: thiI
gene_biotype: protein_coding
description:
  Thiazole biosynthesis/tRNA modification protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.


ensembl_gene_id: Marpi_1870
symbol: AEX86251.1
gene_biotype: protein_coding
description:
  PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.


ensembl_gene_id: Marpi_1872
symbol: AEX86253.1
gene_biotype: protein_coding
description:
  Geranylgeranyl pyrophosphate synthase; PFAM: Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: Marpi_1876
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: Marpi_1890
symbol: AEX86270.1
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: Marpi_1891
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: Marpi_1894
symbol: AEX86274.1
gene_biotype: protein_coding
description:
  Hydrogenase, Fe-only; PFAM: Iron only hydrogenase large subunit, C-terminal domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Iron hydrogenase small subunit; TIGRFAM: hydrogenase, Fe-only.


ensembl_gene_id: Marpi_1895
symbol: AEX86275.1
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; 4Fe-4S binding domain; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain.


ensembl_gene_id: Marpi_1899
symbol: groS
gene_biotype: protein_coding
description:
  Co-chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: Marpi_1900
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: Marpi_1905
symbol: AEX86285.1
gene_biotype: protein_coding
description:
  Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.


ensembl_gene_id: Marpi_1906
symbol: AEX86286.1
gene_biotype: protein_coding
description:
  PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); Flagellar basal body protein FlaE; TIGRFAM: fagellar hook-basal body proteins.


ensembl_gene_id: Marpi_1910
symbol: AEX86290.1
gene_biotype: protein_coding
description:
  Flagellar basal body-associated protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: Marpi_1911
symbol: AEX86291.1
gene_biotype: protein_coding
description:
  PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM.


ensembl_gene_id: Marpi_1912
symbol: AEX86292.1
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliN; PFAM: Surface presentation of antigens (SPOA); CheC-like family; TIGRFAM: flagellar motor switch protein FliN.


ensembl_gene_id: Marpi_1915
symbol: AEX86295.1
gene_biotype: protein_coding
description:
  ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter; manually curated.


ensembl_gene_id: Marpi_1931
symbol: AEX86311.1
gene_biotype: protein_coding
description:
  MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein.


ensembl_gene_id: Marpi_1934
symbol: AEX86314.1
gene_biotype: protein_coding
description:
  PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glutamine-N5) methyltransferase, release factor-specific.


ensembl_gene_id: Marpi_1940
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase, family II; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and i [...]


ensembl_gene_id: Marpi_1941
symbol: metG
gene_biotype: protein_coding
description:
  Protein containing C-terminal region/beta chain of methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: Marpi_1942
symbol: AEX86320.1
gene_biotype: protein_coding
description:
  PFAM: DNA gyrase C-terminal domain, beta-propeller; DNA gyrase/topoisomerase IV, subunit A; TIGRFAM: DNA gyrase, A subunit.


ensembl_gene_id: Marpi_1945
symbol: AEX86323.1
gene_biotype: protein_coding
description:
  PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerases, RpiB/LacA/LacB family.


ensembl_gene_id: Marpi_1949
symbol: AEX86327.1
gene_biotype: protein_coding
description:
  PFAM: Helix-hairpin-helix motif; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; comEA protein.


ensembl_gene_id: Marpi_1950
symbol: queH
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).


ensembl_gene_id: Marpi_1951
symbol: AEX86329.1
gene_biotype: protein_coding
description:
  Anti-sigma regulatory factor (Ser/Thr protein kinase); PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.


ensembl_gene_id: Marpi_1952
symbol: AEX86330.1
gene_biotype: protein_coding
description:
  Putative polymerase with PALM domain, HD hydrolase domain and Zn ribbon; PFAM: Protein of unknown function (DUF342).


ensembl_gene_id: Marpi_1954
symbol: thyX
gene_biotype: protein_coding
description:
  Thymidylate synthase, flavin-dependent; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: Marpi_1956
symbol: AEX86334.1
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, contains C-terminal CBS domains; PFAM: CBS domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.


ensembl_gene_id: Marpi_1962
symbol: AEX86340.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4); PFAM: D-Ala-D-Ala carboxypeptidase 3 (S13) family; TIGRFAM: D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family.


ensembl_gene_id: Marpi_1963
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: Marpi_1971
symbol: AEX86349.1
gene_biotype: protein_coding
description:
  PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, prokaryotic type.


ensembl_gene_id: Marpi_1972
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: Marpi_1973
symbol: proA
gene_biotype: protein_coding
description:
  Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: Marpi_1974
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: Marpi_1975
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.


ensembl_gene_id: Marpi_1976
symbol: leuC
gene_biotype: protein_coding
description:
  Homoaconitate hydratase family protein/3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: Marpi_1977
symbol: AEX86355.1
gene_biotype: protein_coding
description:
  PFAM: Citrate synthase; TIGRFAM: 2-methylcitrate synthase/citrate synthase II; Belongs to the citrate synthase family.


ensembl_gene_id: Marpi_1988
symbol: AEX86364.1
gene_biotype: protein_coding
description:
  PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family.


ensembl_gene_id: Marpi_1992
symbol: AEX86368.1
gene_biotype: protein_coding
description:
  Periplasmic serine protease, Do/DeqQ family; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family.


ensembl_gene_id: Marpi_1993
symbol: AEX86369.1
gene_biotype: protein_coding
description:
  ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; PFAM: ABC transporter; Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: Marpi_1994
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: Marpi_1997
symbol: AEX86373.1
gene_biotype: protein_coding
description:
  PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase.


ensembl_gene_id: Marpi_2000
symbol: mnmG
gene_biotype: protein_coding
description:
  Glucose-inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: Marpi_2004
symbol: AEX86380.1
gene_biotype: protein_coding
description:
  Pullulanase, type I; PFAM: Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Bacterial pullanase-associated domain; TIGRFAM: pullulanase, type I; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: Marpi_2005
symbol: rsmH
gene_biotype: protein_coding
description:
  S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: Marpi_2007
symbol: AEX86383.1
gene_biotype: protein_coding
description:
  Cell division protein FtsI/penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain; PASTA domain.


ensembl_gene_id: Marpi_2013
symbol: AEX86389.1
gene_biotype: protein_coding
description:
  Flagellar capping protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: Marpi_2014
symbol: AEX86390.1
gene_biotype: protein_coding
description:
  Zn-dependent carboxypeptidase; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.


ensembl_gene_id: Marpi_2015
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: Marpi_2017
symbol: AEX86393.1
gene_biotype: protein_coding
description:
  Chemotaxis protein histidine kinase-like protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.


ensembl_gene_id: Marpi_2020
symbol: folD
gene_biotype: protein_coding
description:
  5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: Marpi_2021
symbol: fhs
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate synthetase; PFAM: Formate--tetrahydrofolate ligase; Belongs to the formate--tetrahydrofolate ligase family.


ensembl_gene_id: Marpi_2024
symbol: AEX86400.1
gene_biotype: protein_coding
description:
  Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; PFAM: CheB methylesterase; manually curated; non-canonical start codon.


ensembl_gene_id: Marpi_2025
symbol: AEX86401.1
gene_biotype: protein_coding
description:
  Chemotaxis protein histidine kinase-like protein; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hpt domain.


ensembl_gene_id: Marpi_2042
symbol: AEX86418.1
gene_biotype: protein_coding
description:
  Lactate dehydrogenase-like oxidoreductase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; TIGRFAM: D-3-phosphoglycerate dehydrogenase.


ensembl_gene_id: Marpi_2052
symbol: AEX86427.1
gene_biotype: protein_coding
description:
  PFAM: Galactokinase galactose-binding signature; GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: galactokinase; Belongs to the GHMP kinase family. GalK subfamily.


ensembl_gene_id: Marpi_2053
symbol: AEX86428.1
gene_biotype: protein_coding
description:
  PFAM: Galactose-1-phosphate uridyl transferase, C-terminal domain; Galactose-1-phosphate uridyl transferase, N-terminal domain; TIGRFAM: galactose-1-phosphate uridylyltransferase, family 1.


ensembl_gene_id: Marpi_2059
symbol: AEX86434.1
gene_biotype: protein_coding
description:
  Putative branched-chain amino acid permease (azaleucine resistance); PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC.


ensembl_gene_id: Marpi_2070
symbol: psuG
gene_biotype: protein_coding
description:
  Putative enzyme involved in pigment biosynthesis; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family.


ensembl_gene_id: Marpi_2077
symbol: AEX86452.1
gene_biotype: protein_coding
description:
  PFAM: Chorismate mutase type I; TIGRFAM: monofunctional chorismate mutase, gram positive type, clade 1.


ensembl_gene_id: Marpi_2078
symbol: hcp
gene_biotype: protein_coding
description:
  6Fe-6S prismane cluster-containing protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.


ensembl_gene_id: Marpi_2086
symbol: AEX86461.1
gene_biotype: protein_coding
description:
  ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region.


ensembl_gene_id: Marpi_2094
symbol: AEX86469.1
gene_biotype: protein_coding
description:
  Zn-dependent dipeptidase, microsomal dipeptidase; PFAM: Membrane dipeptidase (Peptidase family M19).


ensembl_gene_id: Marpi_2103
symbol: AEX86478.1
gene_biotype: protein_coding
description:
  Putative ATPase with chaperone activity; PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein.


ensembl_gene_id: Marpi_2104
symbol: AEX86479.1
gene_biotype: protein_coding
description:
  ABC-type metal ion transport system, periplasmic component/surface adhesin; PFAM: Periplasmic solute binding protein family; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: Marpi_2114
symbol: AEX86489.1
gene_biotype: protein_coding
description:
  Putative membrane metal-binding protein; PFAM: Competence protein; TIGRFAM: ComEC/Rec2-related protein.


ensembl_gene_id: Marpi_2115
symbol: apgM
gene_biotype: protein_coding
description:
  2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: Marpi_2116
symbol: AEX86491.1
gene_biotype: protein_coding
description:
  Putative HAD superfamily hydrolase; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase; 2-haloalkanoic acid dehalogenase, type II.


