# geneInfo

ensembl_gene_id: Lery_0002
symbol: Lery_0002
gene_biotype: protein_coding
description:
  Ribosomal large subunit (23S rRNA) pseudouridine synthase C; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: Lery_0004
symbol: pgsA
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: Lery_0007
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase (NAD+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: Lery_0008
symbol: secB
gene_biotype: protein_coding
description:
  Protein-export protein SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.


ensembl_gene_id: Lery_0009
symbol: grxC
gene_biotype: protein_coding
description:
  Glutaredoxin; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.


ensembl_gene_id: Lery_0019
symbol: lpxA_1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: Lery_0020
symbol: trmL
gene_biotype: protein_coding
description:
  RNA methyltransferase TrmH family, group 2; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.


ensembl_gene_id: Lery_0022
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: Lery_0029
symbol: rsmJ
gene_biotype: protein_coding
description:
  SAM-dependent methyltransferase; Specifically methylates the guanosine in position 1516 of 16S rRNA.


ensembl_gene_id: Lery_0034
symbol: metN
gene_biotype: protein_coding
description:
  D-methionine transport ATP binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: Lery_0043
symbol: speA
gene_biotype: protein_coding
description:
  Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.


ensembl_gene_id: Lery_0054
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: Lery_0057
symbol: msbA
gene_biotype: protein_coding
description:
  ABC transporter, ATP binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.


ensembl_gene_id: Lery_0058
symbol: lpxK_1
gene_biotype: protein_coding
description:
  Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: Lery_0062
symbol: Lery_0062
gene_biotype: protein_coding
description:
  ABC dipeptide/oligopeptide/nickel transport, ATPase component; Belongs to the ABC transporter superfamily.


ensembl_gene_id: Lery_0064
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacy [...]


ensembl_gene_id: Lery_0067
symbol: ydaO
gene_biotype: protein_coding
description:
  C32 tRNA thiolase; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.


ensembl_gene_id: Lery_0070
symbol: kbl
gene_biotype: protein_coding
description:
  2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.


ensembl_gene_id: Lery_0071
symbol: tdh
gene_biotype: protein_coding
description:
  Threonine(-3-)dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family.


ensembl_gene_id: Lery_0076
symbol: hutG
gene_biotype: protein_coding
description:
  Formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.


ensembl_gene_id: Lery_0088
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: Lery_0090
symbol: acrB
gene_biotype: protein_coding
description:
  Hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: Lery_0091
symbol: acrA
gene_biotype: protein_coding
description:
  RND efflux membrane fusion protein, acriflavin resistance protein E; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Lery_0095
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: Lery_0096
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: Lery_0097
symbol: nusB
gene_biotype: protein_coding
description:
  N utilization substance protein B; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: Lery_0098
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: Lery_0099
symbol: pgpA
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphatase A; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).


ensembl_gene_id: Lery_0105
symbol: Lery_0105
gene_biotype: protein_coding
description:
  Adenylyl transferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB [...]


ensembl_gene_id: Lery_0107
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: Lery_0109
symbol: groES
gene_biotype: protein_coding
description:
  Co-chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: Lery_0110
symbol: htpB
gene_biotype: protein_coding
description:
  Molecular chaperone GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: Lery_0115
symbol: dctA
gene_biotype: protein_coding
description:
  C4-dicarboxylic acid, orotate and citrate transporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: Lery_0121
symbol: parE
gene_biotype: protein_coding
description:
  DNA topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily.


ensembl_gene_id: Lery_0122
symbol: mrp
gene_biotype: protein_coding
description:
  ATPase; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: Lery_0125
symbol: lysAC
gene_biotype: protein_coding
description:
  Bifunctional aspartate kinase/diaminopimelate decarboxylase protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.


ensembl_gene_id: Lery_0131
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: Lery_0135
symbol: recA
gene_biotype: protein_coding
description:
  Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: Lery_0137
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: Lery_0138
symbol: mscL
gene_biotype: protein_coding
description:
  Large conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: Lery_0142
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III subunit tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: Lery_0143
symbol: ybaB
gene_biotype: protein_coding
description:
  Nucleoid-associated protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: Lery_0144
symbol: recR
gene_biotype: protein_coding
description:
  Recombinational DNA repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: Lery_0153
symbol: Lery_0153
gene_biotype: protein_coding
description:
  Integral membrane protein, AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: Lery_0155
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein Ffh; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual comp [...]


ensembl_gene_id: Lery_0157
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: Lery_0158
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: Lery_0159
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: Lery_0205
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: Lery_0207
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: Lery_0208
symbol: tpm
gene_biotype: protein_coding
description:
  Thiopurine S-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family.


ensembl_gene_id: Lery_0220
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N' (replication factor Y); Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: Lery_0224
symbol: Lery_0224
gene_biotype: protein_coding
description:
  Nitrogen regulation protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: Lery_0229
symbol: Lery_0229
gene_biotype: protein_coding
description:
  Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.


ensembl_gene_id: Lery_0250
symbol: efp
gene_biotype: protein_coding
description:
  Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family.


ensembl_gene_id: Lery_0252
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: Lery_0260
symbol: lptD
gene_biotype: protein_coding
description:
  Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.


ensembl_gene_id: Lery_0261
symbol: surA-2
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase D; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation.


ensembl_gene_id: Lery_0262
symbol: pdxA
gene_biotype: protein_coding
description:
  4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).


ensembl_gene_id: Lery_0263
symbol: folA
gene_biotype: protein_coding
description:
  Dihydrofolate reductase FolA; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.


ensembl_gene_id: Lery_0270
symbol: yggX
gene_biotype: protein_coding
description:
  Protein that protects iron-sulfur proteins against oxidative damage; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes.


ensembl_gene_id: Lery_0271
symbol: psuG
gene_biotype: protein_coding
description:
  Indigoidine synthase A-like protein involved in pigment biosynthesis; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family.


ensembl_gene_id: Lery_0290
symbol: hisC-2
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: Lery_0298
symbol: secF
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: Lery_0299
symbol: secD
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: Lery_0300
symbol: yajC
gene_biotype: protein_coding
description:
  SecYEG protein translocase auxillary subunit; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.


ensembl_gene_id: Lery_0302
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: Lery_0304
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: Lery_0307
symbol: lepA-2
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: Lery_0309
symbol: Lery_0309
gene_biotype: protein_coding
description:
  General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.


ensembl_gene_id: Lery_0325
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: Lery_0332
symbol: fliA
gene_biotype: protein_coding
description:
  Sigma factor 28; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.


ensembl_gene_id: Lery_0335
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: Lery_0336
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: Lery_0337
symbol: fliR
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein fliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: Lery_0338
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: Lery_0339
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: Lery_0341
symbol: fliN
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.


ensembl_gene_id: Lery_0342
symbol: Lery_0342
gene_biotype: protein_coding
description:
  Flagellar protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.


ensembl_gene_id: Lery_0347
symbol: Lery_0347
gene_biotype: protein_coding
description:
  Arginine ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: Lery_0361
symbol: selO
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.


ensembl_gene_id: Lery_0364
symbol: gltX
gene_biotype: protein_coding
description:
  Glutamate tRNA synthetase catalytic subunit; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).


ensembl_gene_id: Lery_0366
symbol: pfp
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.


ensembl_gene_id: Lery_0375
symbol: kdsB
gene_biotype: protein_coding
description:
  3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: Lery_0379
symbol: Lery_0379
gene_biotype: protein_coding
description:
  Ferredoxin II (4Fe-4S); Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: Lery_0383
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: Lery_0387
symbol: adc
gene_biotype: protein_coding
description:
  Acetoacetate decarboxylase; Catalyzes the conversion of acetoacetate to acetone and carbon dioxide; Belongs to the ADC family.


ensembl_gene_id: Lery_0401
symbol: sufS
gene_biotype: protein_coding
description:
  Selenocysteine lyase, PLP-dependent; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.


ensembl_gene_id: Lery_0407
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: Lery_0416
symbol: pepA
gene_biotype: protein_coding
description:
  Aminopeptidase A/I; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: Lery_0421
symbol: murJ
gene_biotype: protein_coding
description:
  Integral membrane protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: Lery_0433
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: Lery_0437
symbol: bioC
gene_biotype: protein_coding
description:
  Biotin synthase; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway.


ensembl_gene_id: Lery_0441
symbol: hemA-2
gene_biotype: protein_coding
description:
  Glutamyl tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: Lery_0442
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: Lery_0443
symbol: hemK
gene_biotype: protein_coding
description:
  Protein methyltransferase HemK; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: Lery_0444
symbol: dksA
gene_biotype: protein_coding
description:
  DnaK suppressor protein; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression.


ensembl_gene_id: Lery_0445
symbol: kdtA
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-oct-2-ulosonic acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: Lery_0446
symbol: djlA
gene_biotype: protein_coding
description:
  DNA binding protein DnaJ, heat shock protein; Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB/RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host.


ensembl_gene_id: Lery_0452
symbol: deaD
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.


ensembl_gene_id: Lery_0456
symbol: sodC
gene_biotype: protein_coding
description:
  Superoxide dismutase, Cu, Zn; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.


ensembl_gene_id: Lery_0462
symbol: ahpD
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: Lery_0498
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: Lery_0499
symbol: yqgF
gene_biotype: protein_coding
description:
  Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: Lery_0504
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: Lery_0511
symbol: cyoE
gene_biotype: protein_coding
description:
  Polyprenyltransferase (cytochrome oxidase assembly factor); Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.


ensembl_gene_id: Lery_0523
symbol: katG
gene_biotype: protein_coding
description:
  Catalase/(hydro)peroxidase KatG; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.


ensembl_gene_id: Lery_0530
symbol: Lery_0530
gene_biotype: protein_coding
description:
  Hypothetical protein; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.


ensembl_gene_id: Lery_0534
symbol: purE
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: Lery_0535
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: Lery_0537
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: Lery_0539
symbol: purQ
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase I (FGAM synthase I); Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is t [...]


ensembl_gene_id: Lery_0541
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase II (FGAM synthase II); Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is [...]


ensembl_gene_id: Lery_0563
symbol: ykoV
gene_biotype: protein_coding
description:
  Putative DNA repair protein YkoV; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.


ensembl_gene_id: Lery_0594
symbol: Lery_0594
gene_biotype: protein_coding
description:
  LysR family transporter transcriptional regulator; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: Lery_0599
symbol: eno
gene_biotype: protein_coding
description:
  Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.


ensembl_gene_id: Lery_0606
symbol: rpoH
gene_biotype: protein_coding
description:
  RNA polymerase sigma-32 factor RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.


ensembl_gene_id: Lery_0607
symbol: ftsX
gene_biotype: protein_coding
description:
  Cell division ATP transporter FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: Lery_0608
symbol: ftsE
gene_biotype: protein_coding
description:
  Cell division ATP transporter FtsE; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: Lery_0609
symbol: ftsY
gene_biotype: protein_coding
description:
  Cell division membrane protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.


ensembl_gene_id: Lery_0612
symbol: yhhF
gene_biotype: protein_coding
description:
  Methyltransferase; Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle; Belongs to the methyltransferase superfamily. RsmD family.


ensembl_gene_id: Lery_0622
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: Lery_0623
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: Lery_0626
symbol: yjeF
gene_biotype: protein_coding
description:
  Carbohydrate kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...]


ensembl_gene_id: Lery_0630
symbol: petB
gene_biotype: protein_coding
description:
  Ubiquinol-cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: Lery_0631
symbol: petA
gene_biotype: protein_coding
description:
  Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: Lery_0658
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: Lery_0665
symbol: rep
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase Rep; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction.


ensembl_gene_id: Lery_0666
symbol: Lery_0666
gene_biotype: protein_coding
description:
  Heat shock protein 33, redox regulated chaperonin; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress; Belongs to the HSP33 family.


ensembl_gene_id: Lery_0676
symbol: yacG
gene_biotype: protein_coding
description:
  DNA gyrase inhibitor YacG; Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C- terminal domain of GyrB, which probably disrupts DNA binding by the gyrase.


ensembl_gene_id: Lery_0678
symbol: ppnK
gene_biotype: protein_coding
description:
  Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: Lery_0685
symbol: folB
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase FolB; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: Lery_0688
symbol: hemE_1
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: Lery_0691
symbol: grpE
gene_biotype: protein_coding
description:
  Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- [...]


ensembl_gene_id: Lery_0693
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: Lery_0695
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: Lery_0696
symbol: sahH
gene_biotype: protein_coding
description:
  S-adenosyl-L-homocysteine hydrolase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: Lery_0698
symbol: Lery_0698
gene_biotype: protein_coding
description:
  Multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: Lery_0703
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: Lery_0704
symbol: Lery_0704
gene_biotype: protein_coding
description:
  Pyridoxal-5'-phosphate dependent enzyme family transporter protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: Lery_0706
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: Lery_0709
symbol: rpoZ
gene_biotype: protein_coding
description:
  RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: Lery_0710
symbol: spoT
gene_biotype: protein_coding
description:
  Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: Lery_0722
symbol: pntB
gene_biotype: protein_coding
description:
  NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.


ensembl_gene_id: Lery_0732
symbol: Lery_0732
gene_biotype: protein_coding
description:
  Membrane protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: Lery_0740
symbol: msrA
gene_biotype: protein_coding
description:
  Bifunctional methionine sulfoxide reductase B/A protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: Lery_0745
symbol: tatA
gene_biotype: protein_coding
description:
  TatA protein(twin arginine translocation); Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: Lery_0746
symbol: ubiB
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis protein; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis.


ensembl_gene_id: Lery_0748
symbol: ubiE
gene_biotype: protein_coding
description:
  Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).


ensembl_gene_id: Lery_0759
symbol: coxB
gene_biotype: protein_coding
description:
  Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).


ensembl_gene_id: Lery_0760
symbol: coxA
gene_biotype: protein_coding
description:
  Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.


ensembl_gene_id: Lery_0767
symbol: gidB
gene_biotype: protein_coding
description:
  Glucose inhibited division protein B GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.


ensembl_gene_id: Lery_0768
symbol: gidA
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: Lery_0770
symbol: rfbA
gene_biotype: protein_coding
description:
  Phosphomannose isomerase GDP mannose pyrophosphorylase; Belongs to the mannose-6-phosphate isomerase type 2 family.


ensembl_gene_id: Lery_0771
symbol: queC
gene_biotype: protein_coding
description:
  ExsB protein; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.


ensembl_gene_id: Lery_0773
symbol: metG
gene_biotype: protein_coding
description:
  Methionyl tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: Lery_0774
symbol: rnfB
gene_biotype: protein_coding
description:
  Electron transport complex protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.


ensembl_gene_id: Lery_0775
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: Lery_0777
symbol: corA_2
gene_biotype: protein_coding
description:
  Cobalt/magnesium uptake transporter; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: Lery_0780
symbol: glmU
gene_biotype: protein_coding
description:
  Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: Lery_0784
symbol: rppH
gene_biotype: protein_coding
description:
  Dinucleoside polyphosphate hydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.


ensembl_gene_id: Lery_0787
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: Lery_0788
symbol: thyA
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: Lery_0793
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: Lery_0794
symbol: lpxD_1
gene_biotype: protein_coding
description:
  UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: Lery_0795
symbol: fabF_1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: Lery_0799
symbol: msrA-2
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: Lery_0808
symbol: gcvPB
gene_biotype: protein_coding
description:
  Putative glycine dehydrogenase [decarboxylating] subunit 2; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily.


ensembl_gene_id: Lery_0810
symbol: gcsA
gene_biotype: protein_coding
description:
  Glycine dehydrogenase subunit 1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.


ensembl_gene_id: Lery_0811
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: Lery_0812
symbol: gcvT
gene_biotype: protein_coding
description:
  Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine.


ensembl_gene_id: Lery_0827
symbol: engB
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTP-binding protein YsxC; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: Lery_0828
symbol: acsB
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.


ensembl_gene_id: Lery_0833
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: Lery_0835
symbol: Lery_0835
gene_biotype: protein_coding
description:
  ProQ; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family.


ensembl_gene_id: Lery_0840
symbol: gap
gene_biotype: protein_coding
description:
  Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: Lery_0841
symbol: Lery_0841
gene_biotype: protein_coding
description:
  Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.


ensembl_gene_id: Lery_0849
symbol: lvrC
gene_biotype: protein_coding
description:
  Vir region protein; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s).


ensembl_gene_id: Lery_0879
symbol: Lery_0879
gene_biotype: protein_coding
description:
  Short chain dehydrogenase/reductase family oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Lery_0893
symbol: Lery_0893
gene_biotype: protein_coding
description:
  MFS transporter DHA2 family multidrug resistance protein B; Belongs to the major facilitator superfamily.


ensembl_gene_id: Lery_0960
symbol: thiDE
gene_biotype: protein_coding
description:
  Bifunctional phosphomethylpyrimidine kinase ThiD/thiamin- phosphate pyrophosphorylase ThiE; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: Lery_0961
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: Lery_0983
symbol: ribD
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: Lery_0985
symbol: ribA
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: Lery_0986
symbol: ribH
gene_biotype: protein_coding
description:
  Riboflavin synthase beta chain (6,7-dimethyl-8-ribityllumazine synthase); Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family.


ensembl_gene_id: Lery_0987
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: Lery_0989
symbol: bamD
gene_biotype: protein_coding
description:
  Competence lipoprotein ComL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: Lery_0995
symbol: hisI
gene_biotype: protein_coding
description:
  phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphatase; In the N-terminal section; belongs to the PRA-CH family.


ensembl_gene_id: Lery_0996
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: Lery_0998
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: Lery_0999
symbol: hisB
gene_biotype: protein_coding
description:
  Histidinol-phosphatase/imisazoleglycerol- phosphat e dehydratase; In the N-terminal section; belongs to the histidinol- phosphatase family.


ensembl_gene_id: Lery_1001
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: Lery_1002
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase HisG; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily.


ensembl_gene_id: Lery_1010
symbol: flgA
gene_biotype: protein_coding
description:
  Flagellar basal body P-ring biosynthesis protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.


ensembl_gene_id: Lery_1013
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: Lery_1014
symbol: gatA
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: Lery_1015
symbol: gatC
gene_biotype: protein_coding
description:
  glutamyl/tRNA (Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: Lery_1019
symbol: ugpE
gene_biotype: protein_coding
description:
  Sn-glycerol-3-phosphate transmembrane ABC transporter; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.


ensembl_gene_id: Lery_1024
symbol: minE
gene_biotype: protein_coding
description:
  Septum formation topological specificity factor; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: Lery_1026
symbol: panD
gene_biotype: protein_coding
description:
  Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: Lery_1030
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: Lery_1032
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: Lery_1033
symbol: glnD
gene_biotype: protein_coding
description:
  protein-PII uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.


ensembl_gene_id: Lery_1034
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: Lery_1037
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts (EF-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: Lery_1039
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: Lery_1042
symbol: astB
gene_biotype: protein_coding
description:
  Succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2).


ensembl_gene_id: Lery_1043
symbol: astD
gene_biotype: protein_coding
description:
  Succinylglutamic-5-semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.


ensembl_gene_id: Lery_1048
symbol: ubiG
gene_biotype: protein_coding
description:
  3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.


ensembl_gene_id: Lery_1049
symbol: Lery_1049
gene_biotype: protein_coding
description:
  ProQ-like, activator of ProP osmoprotectant transporter; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family.


ensembl_gene_id: Lery_1051
symbol: Lery_1051
gene_biotype: protein_coding
description:
  Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: Lery_1065
symbol: mltA_1
gene_biotype: protein_coding
description:
  Membrane-bound lytic murein transglycosylase; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division.


ensembl_gene_id: Lery_1068
symbol: Lery_1068
gene_biotype: protein_coding
description:
  HlyD family transporter secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Lery_1072
symbol: pdhA
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase e1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).


ensembl_gene_id: Lery_1076
symbol: minC
gene_biotype: protein_coding
description:
  Septum site determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: Lery_1077
symbol: lpxH
gene_biotype: protein_coding
description:
  UDP-2,3-diacylglucosamine hydrolase; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: Lery_1081
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: Lery_1082
symbol: yfgB
gene_biotype: protein_coding
description:
  Fe-S containing enzyme; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: Lery_1087
symbol: bamB
gene_biotype: protein_coding
description:
  PQQ (pyrrolo-quinoline quinone) enzyme repeat protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: Lery_1088
symbol: engA
gene_biotype: protein_coding
description:
  GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: Lery_1093
symbol: pcnB
gene_biotype: protein_coding
description:
  poly(A) polymerase; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: Lery_1098
symbol: ackA_1
gene_biotype: protein_coding
description:
  Acetate kinase (Acetokinase); Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: Lery_1099
symbol: Lery_1099
gene_biotype: protein_coding
description:
  Phosphate acetyl/butaryl transferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.


ensembl_gene_id: Lery_1101
symbol: mnmC_3
gene_biotype: protein_coding
description:
  tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.


ensembl_gene_id: Lery_1104
symbol: prpB
gene_biotype: protein_coding
description:
  2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.


ensembl_gene_id: Lery_1107
symbol: Lery_1107
gene_biotype: protein_coding
description:
  Putative phosphotransferase; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: Lery_1110
symbol: Lery_1110
gene_biotype: protein_coding
description:
  Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.


ensembl_gene_id: Lery_1121
symbol: lipB
gene_biotype: protein_coding
description:
  Lipoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: Lery_1125
symbol: rlpA
gene_biotype: protein_coding
description:
  Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: Lery_1128
symbol: fliD
gene_biotype: protein_coding
description:
  Flagellar hook associated protein 2 FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: Lery_1130
symbol: flaA
gene_biotype: protein_coding
description:
  Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: Lery_1131
symbol: accD
gene_biotype: protein_coding
description:
  Acetyl CoA carboxylase carboxyltransferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: Lery_1135
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: Lery_1137
symbol: rlpB
gene_biotype: protein_coding
description:
  Rare lipoprotein B; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane.


ensembl_gene_id: Lery_1139
symbol: cutE
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: Lery_1142
symbol: fadB
gene_biotype: protein_coding
description:
  3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Lery_1167
symbol: lpxB_1
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: Lery_1170
symbol: rodA
gene_biotype: protein_coding
description:
  Rod shape-determining protein rodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: Lery_1171
symbol: mrdA
gene_biotype: protein_coding
description:
  Penicillin binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.


ensembl_gene_id: Lery_1172
symbol: rlmH
gene_biotype: protein_coding
description:
  rRNA large subunit methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: Lery_1173
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: Lery_1180
symbol: dnaQ
gene_biotype: protein_coding
description:
  DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.


ensembl_gene_id: Lery_1183
symbol: erpA
gene_biotype: protein_coding
description:
  Iron-sulfur cluster insertion protein ErpA; Required for insertion of 4Fe-4S clusters for at least IspG.


ensembl_gene_id: Lery_1184
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA-specific 2-thiouridylase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: Lery_1187
symbol: plsX
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate acyltransferase PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: Lery_1188
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: Lery_1190
symbol: fabG_1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Lery_1192
symbol: fabF_2
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: Lery_1193
symbol: mltG
gene_biotype: protein_coding
description:
  Periplasmic solute-binding protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: Lery_1194
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: Lery_1208
symbol: anmK
gene_biotype: protein_coding
description:
  anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.


ensembl_gene_id: Lery_1233
symbol: ydfG
gene_biotype: protein_coding
description:
  NADP-dependent L-serine/L-allo-threonine dehydrogenase ydfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Lery_1238
symbol: mutH
gene_biotype: protein_coding
description:
  DNA mismatch repair protein mutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences. It is involved in DNA mismatch repair. Belongs to the MutH family.


ensembl_gene_id: Lery_1240
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: Lery_1243
symbol: bioD
gene_biotype: protein_coding
description:
  Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: Lery_1246
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: Lery_1247
symbol: bioA
gene_biotype: protein_coding
description:
  Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: Lery_1250
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: Lery_1251
symbol: zapD
gene_biotype: protein_coding
description:
  Cell division protein ZapD; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity.


ensembl_gene_id: Lery_1278
symbol: csrA-2
gene_biotype: protein_coding
description:
  Carbon storage regulator; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s).


ensembl_gene_id: Lery_1288
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: Lery_1290
symbol: crcB
gene_biotype: protein_coding
description:
  Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: Lery_1292
symbol: fabZ
gene_biotype: protein_coding
description:
  (3R)-hydroxymyristoyl-ACP dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: Lery_1295
symbol: bamA
gene_biotype: protein_coding
description:
  Outer membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: Lery_1298
symbol: uppS_1
gene_biotype: protein_coding
description:
  UDP pyrophosphate synthetase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di- trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide.


ensembl_gene_id: Lery_1311
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: Lery_1317
symbol: yggH
gene_biotype: protein_coding
description:
  tRNA (m7G46) methyltransferase, SAM-dependent; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: Lery_1322
symbol: rpoN
gene_biotype: protein_coding
description:
  RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: Lery_1326
symbol: Lery_1326
gene_biotype: protein_coding
description:
  CDP-diacylglycerol-serine-O- phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: Lery_1334
symbol: Lery_1334
gene_biotype: protein_coding
description:
  Translation initiation protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: Lery_1336
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: Lery_1337
symbol: accB
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: Lery_1338
symbol: Lery_1338
gene_biotype: protein_coding
description:
  Acetyl CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: Lery_1339
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: Lery_1346
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.


ensembl_gene_id: Lery_1348
symbol: hemN
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: Lery_1349
symbol: plsY
gene_biotype: protein_coding
description:
  Transmembrane protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: Lery_1350
symbol: gcp
gene_biotype: protein_coding
description:
  DNA-binding/iron metalloprotein/AP endonuclease; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: Lery_1353
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: Lery_1354
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase sigma 70 factor (RpoD); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: Lery_1355
symbol: Lery_1355
gene_biotype: protein_coding
description:
  Zinc binding dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.


ensembl_gene_id: Lery_1361
symbol: surE
gene_biotype: protein_coding
description:
  Stationary phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: Lery_1364
symbol: rpoS
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response.


ensembl_gene_id: Lery_1367
symbol: ruvC
gene_biotype: protein_coding
description:
  Crossover junction endodeoxyribonuclease ruvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: Lery_1368
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: Lery_1371
symbol: Lery_1371
gene_biotype: protein_coding
description:
  Intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.


ensembl_gene_id: Lery_1375
symbol: gloB
gene_biotype: protein_coding
description:
  Hydroxyacylglutathione hydrolase (glyoxalase II); Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.


ensembl_gene_id: Lery_1376
symbol: rlmJ
gene_biotype: protein_coding
description:
  Protein involved in catabolism of external DNA; Specifically methylates the adenine in position 2030 of 23S rRNA.


ensembl_gene_id: Lery_1382
symbol: folD
gene_biotype: protein_coding
description:
  Bifunctional Methylenetetrahydrofolate dehydrogenase/Methenyltetrahydrofolate cyclohydrolase FolD; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: Lery_1384
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: Lery_1386
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: Lery_1387
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: Lery_1391
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: Lery_1392
symbol: cca
gene_biotype: protein_coding
description:
  tRNA nucleotidyltransferase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases.


ensembl_gene_id: Lery_1393
symbol: orn
gene_biotype: protein_coding
description:
  Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family.


ensembl_gene_id: Lery_1394
symbol: queH
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).


ensembl_gene_id: Lery_1405
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: Lery_1423
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: Lery_1425
symbol: trkH
gene_biotype: protein_coding
description:
  Trk system potassium uptake protein TrkH; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.


ensembl_gene_id: Lery_1439
symbol: Lery_1439
gene_biotype: protein_coding
description:
  Single strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: Lery_1445
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: Lery_1446
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: Lery_1447
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: Lery_1448
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: Lery_1449
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: Lery_1450
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: Lery_1452
symbol: rpsE
gene_biotype: protein_coding
description:
  30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: Lery_1453
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: Lery_1454
symbol: rplF
gene_biotype: protein_coding
description:
  50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: Lery_1455
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: Lery_1457
symbol: rplE
gene_biotype: protein_coding
description:
  50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: Lery_1458
symbol: rplX
gene_biotype: protein_coding
description:
  50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: Lery_1459
symbol: rplN
gene_biotype: protein_coding
description:
  50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: Lery_1460
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: Lery_1462
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: Lery_1463
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: Lery_1464
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: Lery_1465
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: Lery_1466
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: Lery_1467
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: Lery_1469
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.


ensembl_gene_id: Lery_1470
symbol: rpsJ
gene_biotype: protein_coding
description:
  30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: Lery_1473
symbol: fusA_1
gene_biotype: protein_coding
description:
  Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: Lery_1474
symbol: rpsG
gene_biotype: protein_coding
description:
  30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: Lery_1475
symbol: rpsL
gene_biotype: protein_coding
description:
  30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: Lery_1476
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: Lery_1478
symbol: rplL
gene_biotype: protein_coding
description:
  50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: Lery_1479
symbol: rplJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: Lery_1480
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: Lery_1481
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: Lery_1482
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: Lery_1483
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family.


ensembl_gene_id: Lery_1498
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: Lery_1500
symbol: hslV
gene_biotype: protein_coding
description:
  Detoxification / adaptation, Protein fate / hydrolases / secretion; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: Lery_1501
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: Lery_1507
symbol: queF
gene_biotype: protein_coding
description:
  GTP cyclohydrolase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).


ensembl_gene_id: Lery_1523
symbol: kup
gene_biotype: protein_coding
description:
  KUP system potassium uptake protein; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family.


ensembl_gene_id: Lery_1531
symbol: tyrS
gene_biotype: protein_coding
description:
  Tyrosyl tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.


ensembl_gene_id: Lery_1545
symbol: yqiX
gene_biotype: protein_coding
description:
  Amino acid (glutamine) ABC transporter periplasmic amino acid binding protein; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: Lery_1562
symbol: Lery_1562
gene_biotype: protein_coding
description:
  Carboxymuconolactone decarboxylase family transporter; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: Lery_1568
symbol: dfp
gene_biotype: protein_coding
description:
  DNA/pantothenate metabolism flavoprotein; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: Lery_1569
symbol: dut
gene_biotype: protein_coding
description:
  Deoxyuridinetriphosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: Lery_1583
symbol: yggV
gene_biotype: protein_coding
description:
  dITP/XTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: Lery_1595
symbol: ybaL
gene_biotype: protein_coding
description:
  Monovalent cation:proton antiporter (CPA2 family); Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: Lery_1618
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: Lery_1620
symbol: himA
gene_biotype: protein_coding
description:
  Integration host factor subunit Alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: Lery_1621
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: Lery_1622
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: Lery_1623
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: Lery_1625
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: Lery_1626
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: Lery_1634
symbol: ppiB
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase B; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: Lery_1635
symbol: tgt-2
gene_biotype: protein_coding
description:
  Queuine/archaeosine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribo [...]


ensembl_gene_id: Lery_1636
symbol: dsbB
gene_biotype: protein_coding
description:
  Disulfide bond formation protein DsbB; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family.


ensembl_gene_id: Lery_1657
symbol: bchI
gene_biotype: protein_coding
description:
  Magnesium-chelatase 38 kDa subunit; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.


ensembl_gene_id: Lery_1659
symbol: hemD
gene_biotype: protein_coding
description:
  uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: Lery_1660
symbol: hemC
gene_biotype: protein_coding
description:
  Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: Lery_1678
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: Lery_1680
symbol: Lery_1680
gene_biotype: protein_coding
description:
  Cation efflux family protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: Lery_1683
symbol: Lery_1683
gene_biotype: protein_coding
description:
  Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: Lery_1685
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: Lery_1687
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: Lery_1693
symbol: obg
gene_biotype: protein_coding
description:
  GTP-binding protein, GTP1/Obg family; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: Lery_1695
symbol: rplU
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: Lery_1696
symbol: rplY
gene_biotype: protein_coding
description:
  50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: Lery_1697
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: Lery_1698
symbol: ychF
gene_biotype: protein_coding
description:
  GTP-binding protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: Lery_1724
symbol: ftsB
gene_biotype: protein_coding
description:
  Septum formation initiator; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: Lery_1731
symbol: queE
gene_biotype: protein_coding
description:
  Radical activating enzyme; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: Lery_1732
symbol: cpoB
gene_biotype: protein_coding
description:
  Outer membrane protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.


ensembl_gene_id: Lery_1733
symbol: pal
gene_biotype: protein_coding
description:
  Peptidoglycan-associated lipoprotein precursor (19 kDa surface antigen) (PPL); Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: Lery_1740
symbol: fni
gene_biotype: protein_coding
description:
  Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).


ensembl_gene_id: Lery_1751
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: Lery_1758
symbol: lidK
gene_biotype: protein_coding
description:
  (CDP-alcohol) phosphatidyltransferase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: Lery_1767
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: Lery_1769
symbol: tolQ
gene_biotype: protein_coding
description:
  Biopolymer transport protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: Lery_1770
symbol: tolR
gene_biotype: protein_coding
description:
  Membrane spanning protein in TolA-TolQ-TolR complex; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: Lery_1772
symbol: tolB
gene_biotype: protein_coding
description:
  TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: Lery_1781
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: Lery_1785
symbol: glpD
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: Lery_1786
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.


ensembl_gene_id: Lery_1788
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase, subunit A, type II topoisomerase; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP- [...]


ensembl_gene_id: Lery_1789
symbol: serC
gene_biotype: protein_coding
description:
  Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.


ensembl_gene_id: Lery_1790
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: Lery_1792
symbol: Lery_1792
gene_biotype: protein_coding
description:
  30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.


ensembl_gene_id: Lery_1794
symbol: lapB
gene_biotype: protein_coding
description:
  Tetratricopeptide repeat protein; Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane; Belongs to the LapB family.


ensembl_gene_id: Lery_1796
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5`-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: Lery_1801
symbol: ubiC
gene_biotype: protein_coding
description:
  4-hydroxybenzoate synthetase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family.


ensembl_gene_id: Lery_1802
symbol: ubiA
gene_biotype: protein_coding
description:
  4-hydroxybenzoate-octaprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.


ensembl_gene_id: Lery_1803
symbol: deoC
gene_biotype: protein_coding
description:
  2-deoxyribose-5-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate.


ensembl_gene_id: Lery_1804
symbol: xapA
gene_biotype: protein_coding
description:
  Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: Lery_1809
symbol: Lery_1809
gene_biotype: protein_coding
description:
  Proton/sodium-glutamate symport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: Lery_1816
symbol: ybeY
gene_biotype: protein_coding
description:
  Metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: Lery_1821
symbol: scpA
gene_biotype: protein_coding
description:
  Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: Lery_1822
symbol: scpB
gene_biotype: protein_coding
description:
  Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: Lery_1825
symbol: rumA
gene_biotype: protein_coding
description:
  23S rRNA (uracil-5-)-methyltransferase RumA; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily.


ensembl_gene_id: Lery_1826
symbol: relA
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: Lery_1832
symbol: Lery_1832
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase A; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: Lery_1834
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase, secretion protein SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family.


ensembl_gene_id: Lery_1844
symbol: lspE
gene_biotype: protein_coding
description:
  Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.


ensembl_gene_id: Lery_1848
symbol: rluD
gene_biotype: protein_coding
description:
  Uracil hydrolyase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: Lery_1849
symbol: miaB
gene_biotype: protein_coding
description:
  (dimethylallyl)adenosine tRNA methylthiotransferase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: Lery_1854
symbol: Lery_1854
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E1 component oxidoreductase protein AceE; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: Lery_1855
symbol: Lery_1855
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E2 component; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: Lery_1879
symbol: Lery_1879
gene_biotype: protein_coding
description:
  Sugar-proton symporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: Lery_1883
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: Lery_1885
symbol: edd
gene_biotype: protein_coding
description:
  Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.


ensembl_gene_id: Lery_1888
symbol: ywtG
gene_biotype: protein_coding
description:
  D-xylose (galactose, arabinose)-proton symporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: Lery_1913
symbol: Lery_1913
gene_biotype: protein_coding
description:
  RND multidrug efflux membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Lery_1938
symbol: metE
gene_biotype: protein_coding
description:
  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.


ensembl_gene_id: Lery_1957
symbol: cysC
gene_biotype: protein_coding
description:
  Elongation factor Tu (EF-Tu); Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family.


ensembl_gene_id: Lery_1997
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: Lery_2003
symbol: alr
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: Lery_2004
symbol: dnaB
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: Lery_2010
symbol: nadE
gene_biotype: protein_coding
description:
  Glutamine dependent NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: Lery_2031
symbol: lolD
gene_biotype: protein_coding
description:
  ABC transporter ATP binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.


ensembl_gene_id: Lery_2038
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: Lery_2039
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: Lery_2040
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease, ATP binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: Lery_2041
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: Lery_2042
symbol: Lery_2042
gene_biotype: protein_coding
description:
  HupB DNA binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: Lery_2050
symbol: prmB
gene_biotype: protein_coding
description:
  N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue; Belongs to the protein N5-glutamine methyltransferase family. PrmB subfamily.


ensembl_gene_id: Lery_2051
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: Lery_2052
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: Lery_2058
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: Lery_2063
symbol: lspA
gene_biotype: protein_coding
description:
  Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: Lery_2064
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: Lery_2065
symbol: ribF
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibF (riboflavin kinase/FMN adenylyltransferase); Belongs to the ribF family.


ensembl_gene_id: Lery_2071
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: Lery_2072
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase I; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: Lery_2094
symbol: pdxB
gene_biotype: protein_coding
description:
  Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate.


ensembl_gene_id: Lery_2095
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: Lery_2096
symbol: ftsI
gene_biotype: protein_coding
description:
  Peptidoglycan synthetase FtsI precursor; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum.


ensembl_gene_id: Lery_2097
symbol: ftsL
gene_biotype: protein_coding
description:
  Cell division transmembrane protein FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: Lery_2098
symbol: rsmH
gene_biotype: protein_coding
description:
  S-adenosylmethyl transferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: Lery_2100
symbol: coaX
gene_biotype: protein_coding
description:
  Bvg accessory factor; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: Lery_2105
symbol: trmJ
gene_biotype: protein_coding
description:
  RNA methyltransferase; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.


ensembl_gene_id: Lery_2112
symbol: clpB
gene_biotype: protein_coding
description:
  Endopeptidase Clp ATP-binding subunit B; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: Lery_2121
symbol: fliG
gene_biotype: protein_coding
description:
  Flagellar motor switch protein; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.


ensembl_gene_id: Lery_2122
symbol: fliF
gene_biotype: protein_coding
description:
  Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: Lery_2127
symbol: lolA
gene_biotype: protein_coding
description:
  Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: Lery_2130
symbol: aat
gene_biotype: protein_coding
description:
  leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: Lery_2131
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: Lery_2134
symbol: rir1
gene_biotype: protein_coding
description:
  Ribonucleotide-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: Lery_2135
symbol: Lery_2135
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.


ensembl_gene_id: Lery_2148
symbol: cecB_1
gene_biotype: protein_coding
description:
  Chemiosmotic efflux system C protein B; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Lery_2149
symbol: cecA_1
gene_biotype: protein_coding
description:
  Chemiosmotic efflux system protein A-like protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: Lery_2171
symbol: Lery_2171
gene_biotype: protein_coding
description:
  Putative addiction module antidote protein, family (containing the CopG/Arc/MetJ DNA-binding domain).


ensembl_gene_id: Lery_2209
symbol: csrA
gene_biotype: protein_coding
description:
  Global regulator (carbon storage regulator); A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s).


ensembl_gene_id: Lery_2227
symbol: yhdE
gene_biotype: protein_coding
description:
  Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: Lery_2240
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: Lery_2259
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxal phosphate biosynthetic protein PdxJ; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: Lery_2268
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: Lery_2274
symbol: xseA
gene_biotype: protein_coding
description:
  Exonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: Lery_2283
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: Lery_2288
symbol: Lery_2288
gene_biotype: protein_coding
description:
  Hydrolase; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family.


ensembl_gene_id: Lery_2296
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: Lery_2300
symbol: truD
gene_biotype: protein_coding
description:
  Hydrogenase; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.


ensembl_gene_id: Lery_2302
symbol: Lery_2302
gene_biotype: protein_coding
description:
  Phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase; Belongs to the UbiA prenyltransferase family.


ensembl_gene_id: Lery_2314
symbol: Lery_2314
gene_biotype: protein_coding
description:
  Amino acid transporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: Lery_2315
symbol: dapE
gene_biotype: protein_coding
description:
  Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.


ensembl_gene_id: Lery_2316
symbol: dapD
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family.


ensembl_gene_id: Lery_2338
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: Lery_2340
symbol: Lery_2340
gene_biotype: protein_coding
description:
  Oxidoreductase dehydrogenase, short chain; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Lery_2344
symbol: hemF_2
gene_biotype: protein_coding
description:
  Oxygen-dependent coproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.


ensembl_gene_id: Lery_2345
symbol: flgB
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: Lery_2347
symbol: flgD
gene_biotype: protein_coding
description:
  Flagellar basal body rod modification protein; Required for flagellar hook formation. May act as a scaffolding protein.


ensembl_gene_id: Lery_2351
symbol: flgH
gene_biotype: protein_coding
description:
  Flagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: Lery_2352
symbol: flgI
gene_biotype: protein_coding
description:
  Flagellar P-ring protein (precursor) FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: Lery_2369
symbol: def-2
gene_biotype: protein_coding
description:
  Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: Lery_2408
symbol: cebB
gene_biotype: protein_coding
description:
  Chemiosmotic efflux system B protein B; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Lery_2409
symbol: Lery_2409
gene_biotype: protein_coding
description:
  Chemiosmotic efflux system B protein A; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: Lery_2427
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0F1 subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: Lery_2428
symbol: atpE-2
gene_biotype: protein_coding
description:
  ATP synthase C subunit (H transporting ATP synthase); F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: Lery_2430
symbol: atpA-2
gene_biotype: protein_coding
description:
  ATP synthase F0F1 subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: Lery_2444
symbol: ack
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: Lery_2472
symbol: idi
gene_biotype: protein_coding
description:
  Isopentenyl-diphosphate Delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).


ensembl_gene_id: Lery_2482
symbol: fmt
gene_biotype: protein_coding
description:
  Methionyl tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: Lery_2487
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: Lery_2495
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: Lery_2496
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: Lery_2497
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: Lery_2498
symbol: ftsQ
gene_biotype: protein_coding
description:
  Cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly.


ensembl_gene_id: Lery_2499
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: Lery_2502
symbol: ftsW
gene_biotype: protein_coding
description:
  Cell division protein ftsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily.


ensembl_gene_id: Lery_2503
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: Lery_2504
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: Lery_2505
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: Lery_2507
symbol: zipA
gene_biotype: protein_coding
description:
  Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.


ensembl_gene_id: Lery_2508
symbol: smc_4
gene_biotype: protein_coding
description:
  Chromosome segregation SMC protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: Lery_2514
symbol: ubiX
gene_biotype: protein_coding
description:
  3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: Lery_2523
symbol: mutM
gene_biotype: protein_coding
description:
  formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: Lery_2527
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: Lery_2528
symbol: lolB
gene_biotype: protein_coding
description:
  Molecular chaperone LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.


ensembl_gene_id: Lery_2529
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: Lery_2530
symbol: fis_3
gene_biotype: protein_coding
description:
  Global DNA-binding transcriptional dual regulator; Belongs to the transcriptional regulatory Fis family.


ensembl_gene_id: Lery_2535
symbol: pdxH
gene_biotype: protein_coding
description:
  Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).


ensembl_gene_id: Lery_2544
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: Lery_2545
symbol: sucC
gene_biotype: protein_coding
description:
  Succinyl CoA synthetase beta chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: Lery_2546
symbol: sucB
gene_biotype: protein_coding
description:
  Dihydrolipoamide succinyltransferase subunit E2; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: Lery_2549
symbol: sdhA_2
gene_biotype: protein_coding
description:
  Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.


ensembl_gene_id: Lery_2550
symbol: sdhD
gene_biotype: protein_coding
description:
  Succinate dehydrogenase, hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH).


ensembl_gene_id: Lery_2556
symbol: feoB
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: Lery_2560
symbol: panB
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: Lery_2561
symbol: panC
gene_biotype: protein_coding
description:
  Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: Lery_2562
symbol: Lery_2562
gene_biotype: protein_coding
description:
  Pyruvate carboxylase subunit A; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: Lery_2573
symbol: kefC_2
gene_biotype: protein_coding
description:
  Glutathione-regulated potassium efflux system; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: Lery_2574
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: Lery_2578
symbol: pnp
gene_biotype: protein_coding
description:
  Polynucleotide phosphorylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: Lery_2579
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: Lery_2580
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: Lery_2581
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: Lery_2582
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: Lery_2583
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription elongation protein nusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: Lery_2584
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: Lery_2585
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH dehydrogenase I subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: Lery_2588
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase chain K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: Lery_2589
symbol: nuoJ
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase chain J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: Lery_2590
symbol: nuoI
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: Lery_2591
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase chain H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: Lery_2592
symbol: nuoG
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.


ensembl_gene_id: Lery_2593
symbol: Lery_2593
gene_biotype: protein_coding
description:
  NADH dehydrogenase I subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.


ensembl_gene_id: Lery_2595
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH dehydrogenase I subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: Lery_2596
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH dehydrogenase I chain C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: Lery_2597
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: Lery_2598
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH dehydrogenase I chain A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: Lery_2599
symbol: secG
gene_biotype: protein_coding
description:
  Protein-export membrane protein secG (preprotein translocase subunit); Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: Lery_2600
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: Lery_2602
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: Lery_2603
symbol: folP
gene_biotype: protein_coding
description:
  7,8-dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: Lery_2604
symbol: ftsH
gene_biotype: protein_coding
description:
  Cell division protease ftsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: Lery_2605
symbol: rrmJ
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase (cell division protein FtsJ); Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.


ensembl_gene_id: Lery_2610
symbol: Lery_2610
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: Lery_2622
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: Lery_2628
symbol: ppsA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: Lery_2631
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: Lery_2641
symbol: clpS
gene_biotype: protein_coding
description:
  Regulatory protein for ClpA substrate specificity; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: Lery_2644
symbol: potD
gene_biotype: protein_coding
description:
  Spermidine/putrescine-binding periplasmic protein precursor potD (SPBP); Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.


ensembl_gene_id: Lery_2647
symbol: potA
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter, ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.


ensembl_gene_id: Lery_2652
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: Lery_2665
symbol: ccmA
gene_biotype: protein_coding
description:
  Heme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.


ensembl_gene_id: Lery_2666
symbol: ccmB
gene_biotype: protein_coding
description:
  Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family.


ensembl_gene_id: Lery_2669
symbol: ccmC
gene_biotype: protein_coding
description:
  Heme exporter protein CcmC; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.


ensembl_gene_id: Lery_2670
symbol: ccmE
gene_biotype: protein_coding
description:
  Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.


ensembl_gene_id: Lery_2683
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: Lery_2692
symbol: dinP
gene_biotype: protein_coding
description:
  DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: Lery_2704
symbol: rpiA
gene_biotype: protein_coding
description:
  Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.


ensembl_gene_id: Lery_2712
symbol: hipB
gene_biotype: protein_coding
description:
  Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: Lery_2721
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase, homodimeric type; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.


ensembl_gene_id: Lery_2722
symbol: rnsT
gene_biotype: protein_coding
description:
  Ribonuclease T; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis.


ensembl_gene_id: Lery_2725
symbol: sodB
gene_biotype: protein_coding
description:
  Superoxide dismutase, iron; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: Lery_2726
symbol: argD
gene_biotype: protein_coding
description:
  Ornithine/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: Lery_2735
symbol: vacB
gene_biotype: protein_coding
description:
  Exoribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: Lery_2737
symbol: artJ_2
gene_biotype: protein_coding
description:
  Arginine 3rd transport system periplasmic binding protein; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: Lery_2740
symbol: brnQ
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport system 2 carrier protein; Component of the transport system for branched-chain amino acids.


ensembl_gene_id: Lery_2747
symbol: apaH
gene_biotype: protein_coding
description:
  Bis(5'-nucleosyl)-tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.


ensembl_gene_id: Lery_2749
symbol: ksgA
gene_biotype: protein_coding
description:
  Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: Lery_2750
symbol: tatC
gene_biotype: protein_coding
description:
  Sec-independent (periplasmic) protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: Lery_2757
symbol: pldA
gene_biotype: protein_coding
description:
  Phospholipase A1 precursor; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family.


ensembl_gene_id: Lery_2758
symbol: rho
gene_biotype: protein_coding
description:
  Hypothetical protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: Lery_2760
symbol: rsmE
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: Lery_2764
symbol: lpxD_2
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: Lery_2768
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: Lery_2771
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: Lery_2779
symbol: parC
gene_biotype: protein_coding
description:
  DNA topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.


ensembl_gene_id: Lery_2783
symbol: Lery_2783
gene_biotype: protein_coding
description:
  RNA ligase/cyclic nucleotide phosphodiesterase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: Lery_2784
symbol: atpC_2
gene_biotype: protein_coding
description:
  F1 sector of membrane-bound ATP synthase, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: Lery_2785
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase F0F1 subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: Lery_2786
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase F0F1 subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: Lery_2788
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase F1 subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: Lery_2789
symbol: atpF
gene_biotype: protein_coding
description:
  H+-transporting ATP synthase chain b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: Lery_2790
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F0F1 subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: Lery_2791
symbol: atpB-2
gene_biotype: protein_coding
description:
  ATP synthase F0 subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: Lery_2799
symbol: rsmI
gene_biotype: protein_coding
description:
  Tetrapyrrole (corrin/porphyrin) methylase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: Lery_2809
symbol: trmE
gene_biotype: protein_coding
description:
  GTPase; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: Lery_2810
symbol: yidC
gene_biotype: protein_coding
description:
  Cytoplasmic insertase into membrane protein, Sec system; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: Lery_2811
symbol: yidD
gene_biotype: protein_coding
description:
  Putative membrane protein insertion efficiency factor; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: Lery_2812
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component (RNase P); RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: Lery_2813
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosome replication initiator DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: Lery_2814
symbol: dnaN
gene_biotype: protein_coding
description:
  DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...]


ensembl_gene_id: Lery_2815
symbol: recF
gene_biotype: protein_coding
description:
  RecF recombinational DNA repair ATPase; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP.


ensembl_gene_id: Lery_2816
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase, subunit B (type II topoisomerase); A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP [...]


ensembl_gene_id: Lery_2818
symbol: hfq
gene_biotype: protein_coding
description:
  Bacteriophage Q beta replication host factor-I protein; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: Lery_2819
symbol: hflX
gene_biotype: protein_coding
description:
  GTPase; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: Lery_2828
symbol: rlmL
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase L; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family.


ensembl_gene_id: Lery_2839
symbol: pagP
gene_biotype: protein_coding
description:
  Lipid A palmitoyltransferase PagP precursor; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors.


ensembl_gene_id: Lery_2844
symbol: coq7
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis protein; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.


ensembl_gene_id: Lery_2889
symbol: fusA
gene_biotype: protein_coding
description:
  Translation elongation factor 2; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]


ensembl_gene_id: Lery_2890
symbol: katG-2
gene_biotype: protein_coding
description:
  Catalase-peroxidase KatB; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.


ensembl_gene_id: Lery_2894
symbol: Lery_2894
gene_biotype: protein_coding
description:
  Short chain dehydrogenase/reductase family transporter protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Lery_2904
symbol: Lery_2904
gene_biotype: protein_coding
description:
  Electron transferring flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.


ensembl_gene_id: Lery_2928
symbol: tilS
gene_biotype: protein_coding
description:
  Cell cycle protein MesJ; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: Lery_2929
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: Lery_2931
symbol: birA
gene_biotype: protein_coding
description:
  biotin-[acetylCoA carboxylase] holoenzyme synthetase and biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon.


# pathwayInfo

id: CL:1032
description: Mixed, incl. CTP salvage, and Methyltransferase HemK-like
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1032_Mixed,_incl._CTP_salvage,_and_Methyltransferase_HemK-like


id: CL:1046
description: Mixed, incl. Carbon metabolism, and Fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1046_Mixed,_incl._Carbon_metabolism,_and_Fatty_acid_metabolic_process


id: CL:1047
description: Mixed, incl. Carbon metabolism, and Fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1047_Mixed,_incl._Carbon_metabolism,_and_Fatty_acid_metabolic_process


id: CL:1049
description: Carbon metabolism, and Fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1049_Carbon_metabolism,_and_Fatty_acid_metabolic_process


id: CL:1050
description: Carbon metabolism, and Cell redox homeostasis
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1050_Carbon_metabolism,_and_Cell_redox_homeostasis


id: CL:1052
description: Mixed, incl. Citrate cycle (TCA cycle), and Propanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1052_Mixed,_incl._Citrate_cycle_(TCA_cycle),_and_Propanoate_metabolism


id: CL:1053
description: Mixed, incl. Citrate cycle (TCA cycle), and Glycine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1053_Mixed,_incl._Citrate_cycle_(TCA_cycle),_and_Glycine_metabolic_process


id: CL:1054
description: Tricarboxylic acid cycle, and acetyl-CoA biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1054_Tricarboxylic_acid_cycle,_and_acetyl-CoA_biosynthetic_process


id: CL:1073
description: Propionate metabolic process, and Citrate synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1073_Propionate_metabolic_process,_and_Citrate_synthase


id: CL:1085
description: Mixed, incl. acetyl-CoA biosynthetic process, and Leucine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1085_Mixed,_incl._acetyl-CoA_biosynthetic_process,_and_Leucine_biosynthetic_process


id: CL:1086
description: Mixed, incl. Leucine biosynthetic process, and Thiamine pyrophosphate enzyme, TPP-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1086_Mixed,_incl._Leucine_biosynthetic_process,_and_Thiamine_pyrophosphate_enzyme,_TPP-binding


id: CL:1110
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1110_Mixed,_incl._Glycine_metabolic_process,_and_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_disulfide_as_acceptor

description:
  Mixed, incl. Glycine metabolic process, and Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor


id: CL:1112
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1112_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_disulfide_as_acceptor,_and_Pyridine_nucleotide-disulphide_oxidoreductase,_class_I

description:
  Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, and Pyridine nucleotide-disulphide oxidoreductase, class I


id: CL:1114
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1114_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_disulfide_as_acceptor,_and_Glutathione_disulfide_oxidoreductase_activity

description:
  Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, and Glutathione disulfide oxidoreductase activity


id: CL:1132
description: Glycine catabolic process, and Tetrahydrofolate interconversion
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1132_Glycine_catabolic_process,_and_Tetrahydrofolate_interconversion


id: CL:1149
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1149_Aldehyde_dehydrogenase,_cysteine_active_site,_and_Aminotransferases,_class-I,_pyridoxal-phosphate-binding_site

description:
  Aldehyde dehydrogenase, cysteine active site, and Aminotransferases, class-I, pyridoxal-phosphate-binding site


id: CL:1172
description: Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1172_Pentose_phosphate_pathway,_and_Glycolysis


id: CL:1196
description: Glucose 6-phosphate metabolic process, and KDPG/KHG aldolase
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1196_Glucose_6-phosphate_metabolic_process,_and_KDPG/KHG_aldolase


id: CL:1207
description: Mixed, incl. Fatty acid metabolic process, and Butanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1207_Mixed,_incl._Fatty_acid_metabolic_process,_and_Butanoate_metabolism


id: CL:1208
description: Mixed, incl. Fatty acid metabolic process, and acyl-CoA dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1208_Mixed,_incl._Fatty_acid_metabolic_process,_and_acyl-CoA_dehydrogenase_activity


id: CL:1209
description: Fatty acid biosynthetic process, and Short-chain dehydrogenase/reductase SDR
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1209_Fatty_acid_biosynthetic_process,_and_Short-chain_dehydrogenase/reductase_SDR


id: CL:1210
description: Fatty acid biosynthetic process, and Biotin
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1210_Fatty_acid_biosynthetic_process,_and_Biotin


id: CL:1212
description: Fatty acid biosynthesis, and Fatty acid synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1212_Fatty_acid_biosynthesis,_and_Fatty_acid_synthase_activity


id: CL:1214
description: Fatty acid synthase activity, and Acyl carrier activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1214_Fatty_acid_synthase_activity,_and_Acyl_carrier_activity


id: CL:1228
description: Biotin, and Carboxyl transferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1228_Biotin,_and_Carboxyl_transferase_domain


id: CL:1244
description: Beta-ketoacyl synthase, and FabA-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1244_Beta-ketoacyl_synthase,_and_FabA-like_domain


id: CL:1254
description: Mixed, incl. Phosphopantetheine binding, and KR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1254_Mixed,_incl._Phosphopantetheine_binding,_and_KR_domain


id: CL:1257
description: Phosphopantetheine binding, and Acyl carrier activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1257_Phosphopantetheine_binding,_and_Acyl_carrier_activity


id: CL:1278
description: Valine, leucine and isoleucine degradation, and Acyl-CoA dehydrogenase, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1278_Valine,_leucine_and_isoleucine_degradation,_and_Acyl-CoA_dehydrogenase,_N-terminal_domain


id: CL:1279
description: Fatty acid degradation, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1279_Fatty_acid_degradation,_and_Electron_transfer_flavoprotein_domain


id: CL:1280
description: Lipid oxidation, and acyl-CoA dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1280_Lipid_oxidation,_and_acyl-CoA_dehydrogenase_activity


id: CL:1292
description: Electron transfer flavoprotein domain, and Acyl-CoA dehydrogenase, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1292_Electron_transfer_flavoprotein_domain,_and_Acyl-CoA_dehydrogenase,_C-terminal_domain


id: CL:1301
description: Valine catabolic process, and Enoyl-CoA hydratase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1301_Valine_catabolic_process,_and_Enoyl-CoA_hydratase,_C-terminal


id: CL:1311
description: Leucine catabolic process, and Enoyl-CoA hydratase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1311_Leucine_catabolic_process,_and_Enoyl-CoA_hydratase,_C-terminal


id: CL:1324
description: Poly-hydroxybutyrate metabolic process, and MaoC-like dehydratase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1324_Poly-hydroxybutyrate_metabolic_process,_and_MaoC-like_dehydratase_domain


id: CL:134
description: Mixed, incl. Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:134_Mixed,_incl._Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:1348
description: D-alanine metabolic process, and Transmembrane secretion effector
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1348_D-alanine_metabolic_process,_and_Transmembrane_secretion_effector


id: CL:135
description: Mixed, incl. Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:135_Mixed,_incl._Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:1358
description: Zinc ion transport, and Maf-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1358_Zinc_ion_transport,_and_Maf-like_protein


id: CL:1367
description: Electron transport chain, and Oxidative phosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1367_Electron_transport_chain,_and_Oxidative_phosphorylation


id: CL:1369
description: Electron transport chain, and Oxidative phosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1369_Electron_transport_chain,_and_Oxidative_phosphorylation


id: CL:137
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:137_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:1370
description: Electron transport chain, and Peptidase M16, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1370_Electron_transport_chain,_and_Peptidase_M16,_C-terminal


id: CL:1371
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1371_Oxidoreduction-driven_active_transmembrane_transporter_activity,_and_Respiratory_electron_transport_chain

description:
  Oxidoreduction-driven active transmembrane transporter activity, and Respiratory electron transport chain


id: CL:1373
description: Oxidoreduction-driven active transmembrane transporter activity, and Quinone
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1373_Oxidoreduction-driven_active_transmembrane_transporter_activity,_and_Quinone


id: CL:138
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:138_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:1389
description: NADH dehydrogenase (ubiquinone) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1389_NADH_dehydrogenase_(ubiquinone)_activity


id: CL:139
description: Translation, and Proton-transporting ATP synthase activity, rotational mechanism
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:139_Translation,_and_Proton-transporting_ATP_synthase_activity,_rotational_mechanism


id: CL:140
description: Translation, and Proton-transporting ATP synthase activity, rotational mechanism
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:140_Translation,_and_Proton-transporting_ATP_synthase_activity,_rotational_mechanism


id: CL:1401
description: Oxidoreduction-driven active transmembrane transporter activity, and Peptidase M16, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1401_Oxidoreduction-driven_active_transmembrane_transporter_activity,_and_Peptidase_M16,_C-terminal


id: CL:1403
description: Respiratory chain, and Electron transport coupled proton transport
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1403_Respiratory_chain,_and_Electron_transport_coupled_proton_transport


id: CL:141
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:141_Ribosome,_and_Translation_regulator_activity


id: CL:143
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:143_Ribosome,_and_Translation_regulator_activity


id: CL:1432
description: Cytochrome c-like domain, and Cytochrome c oxidase subunit I
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1432_Cytochrome_c-like_domain,_and_Cytochrome_c_oxidase_subunit_I


id: CL:1441
description: Mixed, incl. Cytochrome C oxidase, cbb3-type, subunit III , and AhpC/TSA family
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1441_Mixed,_incl._Cytochrome_C_oxidase,_cbb3-type,_subunit_III_,_and_AhpC/TSA_family


id: CL:1444
description: Mixed, incl. AhpC/TSA family, and Ectoine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1444_Mixed,_incl._AhpC/TSA_family,_and_Ectoine_catabolic_process


id: CL:1446
description: Mixed, incl. UbiA prenyltransferase conserved site, and Copper ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1446_Mixed,_incl._UbiA_prenyltransferase_conserved_site,_and_Copper_ion_binding


id: CL:147
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:147_Ribosome,_and_Translation_regulator_activity


id: CL:1480
description: Mixed, incl. Histidine metabolism, and Oligopeptide transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1480_Mixed,_incl._Histidine_metabolism,_and_Oligopeptide_transmembrane_transporter_activity


id: CL:1482
description: Histidine metabolism, and Tripeptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1482_Histidine_metabolism,_and_Tripeptide_transport


id: CL:149
description: Ribosome, and Translational elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:149_Ribosome,_and_Translational_elongation


id: CL:1498
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1498_Mixed,_incl._Long-chain_fatty_acid_transporting_porin_activity,_and_Oligopeptide_transmembrane_transporter_activity

description:
  Mixed, incl. Long-chain fatty acid transporting porin activity, and Oligopeptide transmembrane transporter activity


id: CL:1507
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1507_Mixed,_incl._Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_one_atom_of_oxygen,_and_Kynurenine_metabolic_process

description:
  Mixed, incl. Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen, and Kynurenine metabolic process


id: CL:1509
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1509_Mixed,_incl._Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_one_atom_of_oxygen,_and_Kynurenine_metabolic_process

description:
  Mixed, incl. Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen, and Kynurenine metabolic process


id: CL:151
description: Structural constituent of ribosome, and Translational elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:151_Structural_constituent_of_ribosome,_and_Translational_elongation


id: CL:1511
description: Rieske [2Fe-2S] iron-sulphur domain, and FAD-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1511_Rieske_[2Fe-2S]_iron-sulphur_domain,_and_FAD-binding_domain


id: CL:1544
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and DHHA1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1544_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_DHHA1_domain


id: CL:1545
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and Glycosyl transferase, family 9
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1545_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_Glycosyl_transferase,_family_9


id: CL:1546
description: Mixed, incl. Glycosyl transferase, family 9, and Regulation of catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1546_Mixed,_incl._Glycosyl_transferase,_family_9,_and_Regulation_of_catabolic_process


id: CL:1555
description: tRNA threonylcarbamoyladenosine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1555_tRNA_threonylcarbamoyladenosine_modification


id: CL:1565
description: Mixed, incl. DHHA1 domain, and Phosphoglycerate mutase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1565_Mixed,_incl._DHHA1_domain,_and_Phosphoglycerate_mutase_activity


id: CL:1579
description: Mixed, incl. Ankyrin repeat-containing domain superfamily, and Band 7 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1579_Mixed,_incl._Ankyrin_repeat-containing_domain_superfamily,_and_Band_7_domain


id: CL:1580
description: Mixed, incl. Ankyrin repeat-containing domain superfamily, and Leucine-rich repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1580_Mixed,_incl._Ankyrin_repeat-containing_domain_superfamily,_and_Leucine-rich_repeat


id: CL:1581
description: Mixed, incl. Ankyrin repeat-containing domain superfamily, and Leucine-rich repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1581_Mixed,_incl._Ankyrin_repeat-containing_domain_superfamily,_and_Leucine-rich_repeat


id: CL:1583
description: Mixed, incl. Ankyrin repeats, and Leucine-rich repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1583_Mixed,_incl._Ankyrin_repeats,_and_Leucine-rich_repeat


id: CL:1584
description: Mixed, incl. Ankyrin repeat-containing domain superfamily, and tRNA wobble uridine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1584_Mixed,_incl._Ankyrin_repeat-containing_domain_superfamily,_and_tRNA_wobble_uridine_modification


id: CL:1587
description: Ankyrin repeat, and Class I MHC mediated antigen processing & presentation
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1587_Ankyrin_repeat,_and_Class_I_MHC_mediated_antigen_processing_&_presentation


id: CL:1615
description: tRNA wobble uridine modification, and Organelle membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1615_tRNA_wobble_uridine_modification,_and_Organelle_membrane


id: CL:1627
description: Leucine-rich repeat, and Ankyrin repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1627_Leucine-rich_repeat,_and_Ankyrin_repeats


id: CL:1630
description: Ankyrin repeats, and Leucine Rich repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1630_Ankyrin_repeats,_and_Leucine_Rich_repeat


id: CL:1672
description: Mixed, incl. Epoxide hydrolase-like, and Adenosine deaminase
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1672_Mixed,_incl._Epoxide_hydrolase-like,_and_Adenosine_deaminase


id: CL:1682
description: Mixed, incl. Band 7 domain, and NfeD-like, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1682_Mixed,_incl._Band_7_domain,_and_NfeD-like,_C-terminal_domain


id: CL:1684
description: Band 7 domain, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1684_Band_7_domain,_and_ATP-dependent_peptidase_activity


id: CL:1710
description: Mixed, incl. Queuosine metabolic process, and MIP18 family-like
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1710_Mixed,_incl._Queuosine_metabolic_process,_and_MIP18_family-like


id: CL:1711
description: Queuosine metabolic process, and MIP18 family-like
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1711_Queuosine_metabolic_process,_and_MIP18_family-like


id: CL:1727
description: Mixed, incl. MIP18 family-like, and Thioesterase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1727_Mixed,_incl._MIP18_family-like,_and_Thioesterase_superfamily


id: CL:1736
description: Mixed, incl. Flavoprotein WrbA-like, and Sugar transporter, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1736_Mixed,_incl._Flavoprotein_WrbA-like,_and_Sugar_transporter,_conserved_site


id: CL:1745
description: Mixed, incl. Nicotinate and nicotinamide metabolism, and Pantothenate biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1745_Mixed,_incl._Nicotinate_and_nicotinamide_metabolism,_and_Pantothenate_biosynthesis


id: CL:1746
description: Mixed, incl. Pyridine nucleotide biosynthetic process, and NAD(P)+ transhydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1746_Mixed,_incl._Pyridine_nucleotide_biosynthetic_process,_and_NAD(P)+_transhydrogenase_activity


id: CL:1747
description: Pyridine nucleotide biosynthetic process, and NAD(P)+ transhydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1747_Pyridine_nucleotide_biosynthetic_process,_and_NAD(P)+_transhydrogenase_activity


id: CL:1750
description: Pyridine nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1750_Pyridine_nucleotide_biosynthetic_process


id: CL:1763
description: Mixed, incl. NAD(P)+ transhydrogenase activity, and Alanine dehydrogenase/PNT, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1763_Mixed,_incl._NAD(P)+_transhydrogenase_activity,_and_Alanine_dehydrogenase/PNT,_C-terminal_domain


id: CL:1778
description: Aspartate metabolic process, and Dicarboxylic acid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1778_Aspartate_metabolic_process,_and_Dicarboxylic_acid_catabolic_process


id: CL:1793
description: Mixed, incl. Pantothenate biosynthesis, and Iron ion homeostasis
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1793_Mixed,_incl._Pantothenate_biosynthesis,_and_Iron_ion_homeostasis


id: CL:1794
description: Iron ion homeostasis, and Serine aminopeptidase, S33
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1794_Iron_ion_homeostasis,_and_Serine_aminopeptidase,_S33


id: CL:1803
description: Pantothenate biosynthesis, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1803_Pantothenate_biosynthesis,_and_Coenzyme_A_biosynthesis


id: CL:1812
description: Mixed, incl. HIT domain, and Inorganic anion transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1812_Mixed,_incl._HIT_domain,_and_Inorganic_anion_transmembrane_transporter_activity


id: CL:1823
description: Mixed, incl. Inositol phosphate metabolism, and Alcohol dehydrogenase-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1823_Mixed,_incl._Inositol_phosphate_metabolism,_and_Alcohol_dehydrogenase-like,_N-terminal


id: CL:1825
description: Mixed, incl. Inositol phosphate metabolism, and Phosphorylase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1825_Mixed,_incl._Inositol_phosphate_metabolism,_and_Phosphorylase_superfamily


id: CL:1827
description: Mixed, incl. Beta-Casp domain, and Thymidine phosphorylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1827_Mixed,_incl._Beta-Casp_domain,_and_Thymidine_phosphorylase_activity


id: CL:1857
description: Mixed, incl. Threonine catabolic process, and Decaprenyl diphosphate synthase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1857_Mixed,_incl._Threonine_catabolic_process,_and_Decaprenyl_diphosphate_synthase-like_superfamily


id: CL:1859
description: Threonine catabolic process, and Zinc-binding dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1859_Threonine_catabolic_process,_and_Zinc-binding_dehydrogenase


id: CL:1878
description: Mixed, incl. Polyamine biosynthetic process, and Arginine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1878_Mixed,_incl._Polyamine_biosynthetic_process,_and_Arginine_metabolism


id: CL:1879
description: Polyamine biosynthetic process, and Arginine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1879_Polyamine_biosynthetic_process,_and_Arginine_metabolism


id: CL:1881
description: Arginine metabolism, and Spermidine synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1881_Arginine_metabolism,_and_Spermidine_synthase_activity


id: CL:1891
description: Polyamine biosynthetic process, and Carbon-nitrogen hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1891_Polyamine_biosynthetic_process,_and_Carbon-nitrogen_hydrolase


id: CL:1903
description: Mixed, incl. GlnD PII-uridylyltransferase, and Regulation of nitrogen utilization
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1903_Mixed,_incl._GlnD_PII-uridylyltransferase,_and_Regulation_of_nitrogen_utilization


id: CL:1917
description: Mixed, incl. Biotin metabolic process, and Acetoacetyl-CoA reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1917_Mixed,_incl._Biotin_metabolic_process,_and_Acetoacetyl-CoA_reductase


id: CL:1919
description: Biotin metabolic process, and Mismatch repair
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1919_Biotin_metabolic_process,_and_Mismatch_repair


id: CL:1949
description: Acetoacetyl-CoA reductase, and Acyl-CoA desaturase
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1949_Acetoacetyl-CoA_reductase,_and_Acyl-CoA_desaturase


id: CL:1964
description: Mixed, incl. Cell division, and Beta-lactamase/transpeptidase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1964_Mixed,_incl._Cell_division,_and_Beta-lactamase/transpeptidase-like


id: CL:1965
description: Mixed, incl. Cell division, and Beta-lactamase/transpeptidase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1965_Mixed,_incl._Cell_division,_and_Beta-lactamase/transpeptidase-like


id: CL:1967
description: Mixed, incl. Cell division, and Beta-lactamase/transpeptidase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1967_Mixed,_incl._Cell_division,_and_Beta-lactamase/transpeptidase-like


id: CL:1969
description: Mixed, incl. Regulation of cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1969_Mixed,_incl._Regulation_of_cell_shape,_and_Cell_division_site


id: CL:197
description: Large ribosomal subunit, and K Homology domain, type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:197_Large_ribosomal_subunit,_and_K_Homology_domain,_type_2


id: CL:1970
description: Regulation of cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1970_Regulation_of_cell_shape,_and_Cell_division_site


id: CL:1971
description: Regulation of cell shape, and Reproduction
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1971_Regulation_of_cell_shape,_and_Reproduction


id: CL:1972
description: Peptidoglycan synthesis, and Reproduction
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1972_Peptidoglycan_synthesis,_and_Reproduction


id: CL:1979
description: Mur ligase, C-terminal, and Glycosyl transferase family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:1979_Mur_ligase,_C-terminal,_and_Glycosyl_transferase_family_4


id: CL:2004
description: Reproduction, and rRNA (cytosine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2004_Reproduction,_and_rRNA_(cytosine)_methyltransferase_activity


id: CL:2013
description: Mixed, incl. Penicillin binding, and Cell cycle protein
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2013_Mixed,_incl._Penicillin_binding,_and_Cell_cycle_protein


id: CL:2024
description: Mixed, incl. Beta-lactamase, and Peptidase M23
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2024_Mixed,_incl._Beta-lactamase,_and_Peptidase_M23


id: CL:2026
description: Beta-lactamase, and Hexosaminidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2026_Beta-lactamase,_and_Hexosaminidase_activity


id: CL:2040
description: Peptidase M23, and N-acetylmuramoyl-L-alanine amidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2040_Peptidase_M23,_and_N-acetylmuramoyl-L-alanine_amidase_activity


id: CL:2053
description: Mixed, incl. Aminotransferase class IV, and Beta-lactamase enzyme family
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2053_Mixed,_incl._Aminotransferase_class_IV,_and_Beta-lactamase_enzyme_family


id: CL:2073
description: Regulation of cell cycle, and ATP binding protein MinD/FleN
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2073_Regulation_of_cell_cycle,_and_ATP_binding_protein_MinD/FleN


id: CL:2089
description: Mostly uncharacterized, incl. TRAM domain, and Peptidase S1C
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2089_Mostly_uncharacterized,_incl._TRAM_domain,_and_Peptidase_S1C


id: CL:2091
description: Mixed, incl. TRAM domain, and Peptidase S1C
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2091_Mixed,_incl._TRAM_domain,_and_Peptidase_S1C


id: CL:2107
description: Mixed, incl. Proline metabolic process, and Protein of unknown function DUF2845
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2107_Mixed,_incl._Proline_metabolic_process,_and_Protein_of_unknown_function_DUF2845


id: CL:2117
description: Import into cell, and Lipoprotein metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2117_Import_into_cell,_and_Lipoprotein_metabolic_process


id: CL:2131
description: Mixed, incl. Carbohydrate metabolic process, and Nucleotide-diphospho-sugar transferases
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2131_Mixed,_incl._Carbohydrate_metabolic_process,_and_Nucleotide-diphospho-sugar_transferases


id: CL:2132
description: Mixed, incl. Polysaccharide biosynthetic process, and Amino sugar and nucleotide sugar metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2132_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Amino_sugar_and_nucleotide_sugar_metabolism


id: CL:2134
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2134_Mixed,_incl._Amino_sugar_and_nucleotide_sugar_metabolism,_and_Cellular_carbohydrate_biosynthetic_process

description:
  Mixed, incl. Amino sugar and nucleotide sugar metabolism, and Cellular carbohydrate biosynthetic process


id: CL:2135
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2135_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Cellular_carbohydrate_biosynthetic_process

description:
  Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Cellular carbohydrate biosynthetic process


id: CL:2137
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Nucleotide-diphospho-sugar transferases
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2137_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Nucleotide-diphospho-sugar_transferases


id: CL:2138
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and L-glutamine aminotransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2138_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_L-glutamine_aminotransferase_activity


id: CL:2140
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Asparagine synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2140_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Asparagine_synthase


id: CL:2144
description: O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2144_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:2169
description: Mixed, incl. Nucleotidyl transferase domain, and Alpha-D-phosphohexomutase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2169_Mixed,_incl._Nucleotidyl_transferase_domain,_and_Alpha-D-phosphohexomutase_superfamily


id: CL:2172
description: Nucleotidyl transferase domain, and UDP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2172_Nucleotidyl_transferase_domain,_and_UDP_binding_domain


id: CL:2185
description: Mixed, incl. Guanylyltransferase activity, and Glutamine amidotransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2185_Mixed,_incl._Guanylyltransferase_activity,_and_Glutamine_amidotransferase_domain


id: CL:2198
description: Mixed, incl. Cell-substrate adhesion, and Thaumarchaeal output domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2198_Mixed,_incl._Cell-substrate_adhesion,_and_Thaumarchaeal_output_domain_1


id: CL:2217
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2217_Mixed,_incl._ABC_transporter,_teichoic_acids_export_TagH-like,_and_NAD-dependent_epimerase/dehydratase

description:
  Mixed, incl. ABC transporter, teichoic acids export TagH-like, and NAD-dependent epimerase/dehydratase


id: CL:2220
description: ABC transporter, teichoic acids export TagH-like, and ABC-2 type transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2220_ABC_transporter,_teichoic_acids_export_TagH-like,_and_ABC-2_type_transporter


id: CL:2237
description: UDP-glycosyltransferase activity, and Mannosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2237_UDP-glycosyltransferase_activity,_and_Mannosylation


id: CL:224
description: Zinc-binding ribosomal protein, and L28p-like
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:224_Zinc-binding_ribosomal_protein,_and_L28p-like


id: CL:2252
description: Mixed, incl. Metallopeptidase, catalytic domain superfamily, and NodB homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2252_Mixed,_incl._Metallopeptidase,_catalytic_domain_superfamily,_and_NodB_homology_domain


id: CL:2261
description: Mixed, incl. Lipopolysaccharide biosynthesis, and glycyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2261_Mixed,_incl._Lipopolysaccharide_biosynthesis,_and_glycyl-tRNA_aminoacylation


id: CL:2262
description: Mixed, incl. Lipopolysaccharide biosynthesis, and Protein stabilization
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2262_Mixed,_incl._Lipopolysaccharide_biosynthesis,_and_Protein_stabilization


id: CL:2263
description: Glycolipid metabolic process, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2263_Glycolipid_metabolic_process,_and_Lipopolysaccharide_biosynthesis


id: CL:2265
description: Lipid A biosynthesis, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2265_Lipid_A_biosynthesis,_and_Lipopolysaccharide_biosynthesis


id: CL:2281
description: Lipopolysaccharide biosynthesis, and SIS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2281_Lipopolysaccharide_biosynthesis,_and_SIS_domain


id: CL:2295
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2295_Mixed,_incl._UDP-2,3-diacylglucosamine_hydrolase_activity,_and_Gfo/Idh/MocA-like_oxidoreductase,_N-terminal

description:
  Mixed, incl. UDP-2,3-diacylglucosamine hydrolase activity, and Gfo/Idh/MocA-like oxidoreductase, N-terminal


id: CL:2304
description: Mixed, incl. Protein stabilization, and Decaprenyl diphosphate synthase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2304_Mixed,_incl._Protein_stabilization,_and_Decaprenyl_diphosphate_synthase-like


id: CL:2306
description: Mixed, incl. Protein stabilization, and Fluoride transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2306_Mixed,_incl._Protein_stabilization,_and_Fluoride_transmembrane_transport


id: CL:2323
description: Mixed, incl. glycyl-tRNA aminoacylation, and BON domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2323_Mixed,_incl._glycyl-tRNA_aminoacylation,_and_BON_domain


id: CL:2324
description: Mixed, incl. glycyl-tRNA aminoacylation, and Pore complex
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2324_Mixed,_incl._glycyl-tRNA_aminoacylation,_and_Pore_complex


id: CL:2325
description: Mixed, incl. glycyl-tRNA aminoacylation, and Glycosyl transferase, family 9
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2325_Mixed,_incl._glycyl-tRNA_aminoacylation,_and_Glycosyl_transferase,_family_9


id: CL:2336
description: Mixed, incl. Pore complex, and Peptidase S33
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2336_Mixed,_incl._Pore_complex,_and_Peptidase_S33


id: CL:2345
description: Mixed, incl. BON domain, and Alkane catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2345_Mixed,_incl._BON_domain,_and_Alkane_catabolic_process


id: CL:2356
description: Mixed, incl. Signal transduction, and Cilium
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2356_Mixed,_incl._Signal_transduction,_and_Cilium


id: CL:2357
description: Mixed, incl. Signal transduction, and Cilium
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2357_Mixed,_incl._Signal_transduction,_and_Cilium


id: CL:2358
description: Mixed, incl. Signal transduction, and Cilium
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2358_Mixed,_incl._Signal_transduction,_and_Cilium


id: CL:2360
description: Mixed, incl. Signal transduction, and Cilium
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2360_Mixed,_incl._Signal_transduction,_and_Cilium


id: CL:2369
description: Signal transduction, and Diguanylate cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2369_Signal_transduction,_and_Diguanylate_cyclase_activity


id: CL:2380
description: GGDEF domain, and Signal transduction response regulator, receiver domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2380_GGDEF_domain,_and_Signal_transduction_response_regulator,_receiver_domain


id: CL:2384
description: GGDEF domain, and Signal transduction histidine kinase-related protein, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2384_GGDEF_domain,_and_Signal_transduction_histidine_kinase-related_protein,_C-terminal


id: CL:2387
description: GGDEF domain, and Signal transduction histidine kinase-related protein, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2387_GGDEF_domain,_and_Signal_transduction_histidine_kinase-related_protein,_C-terminal


id: CL:2391
description: Protein histidine kinase activity, and PAS fold
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2391_Protein_histidine_kinase_activity,_and_PAS_fold


id: CL:2399
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2399_Histidine_Phosphotransfer_domain,_and_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain

description:
  Histidine Phosphotransfer domain, and Signal transduction histidine kinase, dimerisation/phosphoacceptor domain


id: CL:243
description: Mixed, incl. Large ribosomal subunit rRNA binding, and RNA polymerase
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:243_Mixed,_incl._Large_ribosomal_subunit_rRNA_binding,_and_RNA_polymerase


id: CL:2477
description: Diguanylate cyclase activity, and Cyclic-guanylate-specific phosphodiesterase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2477_Diguanylate_cyclase_activity,_and_Cyclic-guanylate-specific_phosphodiesterase_activity


id: CL:2491
description: Bacterial-type flagellum, and Bacterial flagellum biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2491_Bacterial-type_flagellum,_and_Bacterial_flagellum_biogenesis


id: CL:2492
description: Bacterial-type flagellum, and Bacterial flagellum biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2492_Bacterial-type_flagellum,_and_Bacterial_flagellum_biogenesis


id: CL:2495
description: Bacterial-type flagellum basal body, rod, and Flagellar hook-basal body protein, FlgE/F/G
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2495_Bacterial-type_flagellum_basal_body,_rod,_and_Flagellar_hook-basal_body_protein,_FlgE/F/G


id: CL:2497
description: Flagellar basal body rod protein, conserved site, and Flagellar basal body rod protein, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2497_Flagellar_basal_body_rod_protein,_conserved_site,_and_Flagellar_basal_body_rod_protein,_N-terminal


id: CL:2516
description: Bacterial-type flagellum hook, and Flagellin
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2516_Bacterial-type_flagellum_hook,_and_Flagellin


id: CL:2525
description: Cytoskeletal motor activity, and Bacterial flagellum protein export
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2525_Cytoskeletal_motor_activity,_and_Bacterial_flagellum_protein_export


id: CL:2540
description: Bacterial flagellum protein export, and Bacterial-type flagellum assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2540_Bacterial_flagellum_protein_export,_and_Bacterial-type_flagellum_assembly


id: CL:2578
description: Mixed, incl. Protein dephosphorylation, and Heavy metal-associated domain, HMA
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2578_Mixed,_incl._Protein_dephosphorylation,_and_Heavy_metal-associated_domain,_HMA


id: CL:2588
description: Mixed, incl. Heavy metal-associated domain, HMA, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2588_Mixed,_incl._Heavy_metal-associated_domain,_HMA,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:2597
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2597_Mixed,_incl._Bacterial_periplasmic_substrate-binding_proteins,_and_ABC-type_amino_acid_transporter_activity

description:
  Mixed, incl. Bacterial periplasmic substrate-binding proteins, and ABC-type amino acid transporter activity


id: CL:2601
description: Solute-binding protein family 3, conserved site, and ABC-type amino acid transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2601_Solute-binding_protein_family_3,_conserved_site,_and_ABC-type_amino_acid_transporter_activity


id: CL:2620
description: Mixed, incl. Pseudouridine synthase, RsuA/RluB/E/F, and Chromosome partition
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2620_Mixed,_incl._Pseudouridine_synthase,_RsuA/RluB/E/F,_and_Chromosome_partition


id: CL:2621
description: Mixed, incl. Two-component regulatory system, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2621_Mixed,_incl._Two-component_regulatory_system,_and_AAA_domain


id: CL:2623
description: Two-component regulatory system, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2623_Two-component_regulatory_system,_and_AAA_domain


id: CL:2640
description: Mixed, incl. Pseudouridine synthase, RsuA/RluB/E/F, and Chromosome partition
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2640_Mixed,_incl._Pseudouridine_synthase,_RsuA/RluB/E/F,_and_Chromosome_partition


id: CL:2660
description: Nickel cation binding, and PurE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2660_Nickel_cation_binding,_and_PurE_domain


id: CL:2686
description: Mixed, incl. Ribonucleotide catabolic process, and Malic oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2686_Mixed,_incl._Ribonucleotide_catabolic_process,_and_Malic_oxidoreductase


id: CL:2704
description: Mixed, incl. Copper ion transport, and rRNA (uridine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2704_Mixed,_incl._Copper_ion_transport,_and_rRNA_(uridine)_methyltransferase_activity


id: CL:2717
description: Mixed, incl. Histone-like DNA-binding protein, and Antiporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2717_Mixed,_incl._Histone-like_DNA-binding_protein,_and_Antiporter_activity


id: CL:2720
description: Histone-like DNA-binding protein, and Antiport
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2720_Histone-like_DNA-binding_protein,_and_Antiport


id: CL:2746
description: Mixed, incl. Isoprenoid metabolic process, and Exodeoxyribonuclease VII complex
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2746_Mixed,_incl._Isoprenoid_metabolic_process,_and_Exodeoxyribonuclease_VII_complex


id: CL:2747
description: Mixed, incl. Isoprenoid metabolic process, and Exodeoxyribonuclease VII complex
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2747_Mixed,_incl._Isoprenoid_metabolic_process,_and_Exodeoxyribonuclease_VII_complex


id: CL:2748
description: Mixed, incl. Isoprenoid metabolic process, and Exodeoxyribonuclease VII complex
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2748_Mixed,_incl._Isoprenoid_metabolic_process,_and_Exodeoxyribonuclease_VII_complex


id: CL:2750
description: Isoprenoid metabolic process, and Exodeoxyribonuclease VII complex
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2750_Isoprenoid_metabolic_process,_and_Exodeoxyribonuclease_VII_complex


id: CL:2751
description: Isoprenoid metabolic process, and Hydroxymethylglutaryl-coenzyme A reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2751_Isoprenoid_metabolic_process,_and_Hydroxymethylglutaryl-coenzyme_A_reductase


id: CL:2753
description: GHMP kinase N-terminal domain, and Isoprene biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2753_GHMP_kinase_N-terminal_domain,_and_Isoprene_biosynthesis


id: CL:2773
description: Triterpenoid metabolic process, and Fatty acid hydroxylase
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2773_Triterpenoid_metabolic_process,_and_Fatty_acid_hydroxylase


id: CL:2783
description: Geranyltranstransferase activity, and Exodeoxyribonuclease VII complex
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2783_Geranyltranstransferase_activity,_and_Exodeoxyribonuclease_VII_complex


id: CL:2806
description: Mixed, incl. Prenyltransferase, and Extracellular polysaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2806_Mixed,_incl._Prenyltransferase,_and_Extracellular_polysaccharide_metabolic_process


id: CL:2823
description: Mixed, incl. Mechanosensitive ion channel, and Choline/ethanolamine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2823_Mixed,_incl._Mechanosensitive_ion_channel,_and_Choline/ethanolamine_kinase


id: CL:2836
description: Mixed, incl. Glycerophospholipid metabolism, and Toluene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2836_Mixed,_incl._Glycerophospholipid_metabolism,_and_Toluene_degradation


id: CL:2837
description: Mixed, incl. Glycerophospholipid metabolism, and Acyl-CoA desaturase
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2837_Mixed,_incl._Glycerophospholipid_metabolism,_and_Acyl-CoA_desaturase


id: CL:2839
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2839_Mixed,_incl._Alditol_phosphate_metabolic_process,_and_Glycerophosphodiester_phosphodiesterase_domain

description:
  Mixed, incl. Alditol phosphate metabolic process, and Glycerophosphodiester phosphodiesterase domain


id: CL:2842
description: Alditol phosphate metabolic process, and Glycerophosphodiester phosphodiesterase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2842_Alditol_phosphate_metabolic_process,_and_Glycerophosphodiester_phosphodiesterase_domain


id: CL:2869
description: CDP-alcohol phosphatidyltransferase, and Zymogen
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2869_CDP-alcohol_phosphatidyltransferase,_and_Zymogen


id: CL:2879
description: Mixed, incl. Lipid phosphorylation, and Epoxide hydrolase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2879_Mixed,_incl._Lipid_phosphorylation,_and_Epoxide_hydrolase-like


id: CL:2906
description: Mixed, incl. Iron-sulfur cluster assembly, and Glutathione metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2906_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Glutathione_metabolism


id: CL:2907
description: Mixed, incl. Iron-sulfur cluster assembly, and Chromatin
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2907_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Chromatin


id: CL:2908
description: Mixed, incl. Iron-sulfur cluster assembly, and BolA protein
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2908_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_BolA_protein


id: CL:291
description: CTP metabolic process, and Translational termination
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:291_CTP_metabolic_process,_and_Translational_termination


id: CL:2910
description: Iron-sulfur cluster assembly, and Chaperone binding
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2910_Iron-sulfur_cluster_assembly,_and_Chaperone_binding


id: CL:2913
description: Iron-sulfur cluster assembly complex, and Ferrous iron binding
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2913_Iron-sulfur_cluster_assembly_complex,_and_Ferrous_iron_binding


id: CL:2924
description: FeS cluster biogenesis, and Chaperone binding
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2924_FeS_cluster_biogenesis,_and_Chaperone_binding


id: CL:2943
description: Chromatin, and DUS-like, FMN-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2943_Chromatin,_and_DUS-like,_FMN-binding_domain


id: CL:2960
description: Mixed, incl. Glutathione metabolism, and Metallo-beta-lactamase
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2960_Mixed,_incl._Glutathione_metabolism,_and_Metallo-beta-lactamase


id: CL:2962
description: Mixed, incl. Aminopeptidase, and Glutathione biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2962_Mixed,_incl._Aminopeptidase,_and_Glutathione_biosynthetic_process


id: CL:2963
description: Mixed, incl. Macro domain-like, and Peptidoglycan transport
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2963_Mixed,_incl._Macro_domain-like,_and_Peptidoglycan_transport


id: CL:2976
description: Mixed, incl. Glutamate--cysteine ligase, GCS2, and Glutathione biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2976_Mixed,_incl._Glutamate--cysteine_ligase,_GCS2,_and_Glutathione_biosynthetic_process


id: CL:2991
description: Mixed, incl. Metallo-beta-lactamase, and Helix_turn_helix, Lux Regulon
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:2991_Mixed,_incl._Metallo-beta-lactamase,_and_Helix_turn_helix,_Lux_Regulon


id: CL:3011
description: Mixed, incl. Exodeoxyribonuclease V activity, and NAD-dependent epimerase/dehydratase
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3011_Mixed,_incl._Exodeoxyribonuclease_V_activity,_and_NAD-dependent_epimerase/dehydratase


id: CL:3012
description: Mixed, incl. NAD-dependent epimerase/dehydratase, and Pilus retraction protein PilT/PilU
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3012_Mixed,_incl._NAD-dependent_epimerase/dehydratase,_and_Pilus_retraction_protein_PilT/PilU


id: CL:3025
description: Exodeoxyribonuclease V activity, and Monocarboxylic acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3025_Exodeoxyribonuclease_V_activity,_and_Monocarboxylic_acid_transport


id: CL:3034
description: Mixed, incl. Pigment biosynthetic process, and Ubiquinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3034_Mixed,_incl._Pigment_biosynthetic_process,_and_Ubiquinone_metabolic_process


id: CL:3035
description: Pigment biosynthetic process, and Ubiquinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3035_Pigment_biosynthetic_process,_and_Ubiquinone_metabolic_process


id: CL:3036
description: Pigment biosynthetic process, and Ubiquinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3036_Pigment_biosynthetic_process,_and_Ubiquinone_metabolic_process


id: CL:3037
description: Heme biosynthetic process, and Ligase activity, forming nitrogen-metal bonds
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3037_Heme_biosynthetic_process,_and_Ligase_activity,_forming_nitrogen-metal_bonds


id: CL:3081
description: TAT protein transport complex, and Quinone cofactor methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3081_TAT_protein_transport_complex,_and_Quinone_cofactor_methyltransferase_activity


id: CL:3101
description: Mixed, incl. Phosphate transporter, and CNNM, transmembrane domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3101_Mixed,_incl._Phosphate_transporter,_and_CNNM,_transmembrane_domain


id: CL:3110
description: Mixed, incl. Von Willebrand factor A-like domain superfamily, and Transposase, IS4-like
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3110_Mixed,_incl._Von_Willebrand_factor_A-like_domain_superfamily,_and_Transposase,_IS4-like


id: CL:3111
description: Mixed, incl. Von Willebrand factor A-like domain superfamily, and ATPase, AAA-3
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3111_Mixed,_incl._Von_Willebrand_factor_A-like_domain_superfamily,_and_ATPase,_AAA-3


id: CL:3112
description: Mixed, incl. Von Willebrand factor A-like domain superfamily, and ATPase, AAA-3
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3112_Mixed,_incl._Von_Willebrand_factor_A-like_domain_superfamily,_and_ATPase,_AAA-3


id: CL:3115
description: Von Willebrand factor A-like domain superfamily, and Tetratricopeptide repeat 1
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3115_Von_Willebrand_factor_A-like_domain_superfamily,_and_Tetratricopeptide_repeat_1


id: CL:3131
description: Mixed, incl. Cobalt ion transport, and Long-chain fatty acid transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3131_Mixed,_incl._Cobalt_ion_transport,_and_Long-chain_fatty_acid_transporter_activity


id: CL:3144
description: Transposase, IS4-like, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3144_Transposase,_IS4-like,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:3153
description: Mixed, incl. Tyrosine metabolism, and Prokaryotic N-terminal methylation motif
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3153_Mixed,_incl._Tyrosine_metabolism,_and_Prokaryotic_N-terminal_methylation_motif


id: CL:3155
description: Tyrosine metabolism, and Diol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3155_Tyrosine_metabolism,_and_Diol_metabolic_process


id: CL:3180
description: Mixed, incl. Circularly permutated YpsA SLOG, and Sub-family of tyrosine recombinases
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3180_Mixed,_incl._Circularly_permutated_YpsA_SLOG,_and_Sub-family_of_tyrosine_recombinases


id: CL:3196
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3196_Mixed,_incl._Zinc_finger,_RING/FYVE/PHD-type,_and_Outer_membrane_protein/outer_membrane_enzyme_PagP,_beta-barrel

description:
  Mixed, incl. Zinc finger, RING/FYVE/PHD-type, and Outer membrane protein/outer membrane enzyme PagP, beta-barrel


id: CL:3208
description: Mixed, incl. Peroxiredoxin activity, and RNA capping
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3208_Mixed,_incl._Peroxiredoxin_activity,_and_RNA_capping


id: CL:3209
description: Mixed, incl. Peroxiredoxin activity, and RNA capping
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3209_Mixed,_incl._Peroxiredoxin_activity,_and_RNA_capping


id: CL:3223
description: Mixed, incl. RNA capping, and HIT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3223_Mixed,_incl._RNA_capping,_and_HIT_domain


id: CL:3233
description: Mixed, incl. CoA-binding, and Ferric-uptake regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3233_Mixed,_incl._CoA-binding,_and_Ferric-uptake_regulator


id: CL:324
description: Proton-transporting ATP synthase activity, rotational mechanism
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:324_Proton-transporting_ATP_synthase_activity,_rotational_mechanism


id: CL:3254
description: Mixed, incl. UspA, and DNA dealkylation
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3254_Mixed,_incl._UspA,_and_DNA_dealkylation


id: CL:3255
description: Mixed, incl. Host cell endosome, and Flavoprotein WrbA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3255_Mixed,_incl._Host_cell_endosome,_and_Flavoprotein_WrbA-like


id: CL:326
description: Proton-transporting ATP synthase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:326_Proton-transporting_ATP_synthase_complex


id: CL:3268
description: Mixed, incl. UspA, and DNA dealkylation
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3268_Mixed,_incl._UspA,_and_DNA_dealkylation


id: CL:3289
description: Mixed, incl. Macromolecule localization, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3289_Mixed,_incl._Macromolecule_localization,_and_Signal


id: CL:3290
description: Mixed, incl. Macromolecule localization, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3290_Mixed,_incl._Macromolecule_localization,_and_Signal


id: CL:3291
description: Mixed, incl. Signal, and Intrinsic component of membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3291_Mixed,_incl._Signal,_and_Intrinsic_component_of_membrane


id: CL:3293
description: Mixed, incl. Signal, and Intrinsic component of membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3293_Mixed,_incl._Signal,_and_Intrinsic_component_of_membrane


id: CL:3294
description: Mixed, incl. Signal, and Intrinsic component of membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3294_Mixed,_incl._Signal,_and_Intrinsic_component_of_membrane


id: CL:3296
description: Mixed, incl. Peptidase activity, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3296_Mixed,_incl._Peptidase_activity,_and_Signal


id: CL:3297
description: Mixed, incl. Peptidase activity, and Protein secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3297_Mixed,_incl._Peptidase_activity,_and_Protein_secretion


id: CL:3298
description: Mostly uncharacterized, incl. Serine-type exopeptidase activity, and Protein secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3298_Mostly_uncharacterized,_incl._Serine-type_exopeptidase_activity,_and_Protein_secretion


id: CL:3299
description: Mostly uncharacterized, incl. Response to organic substance, and Identical protein binding
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3299_Mostly_uncharacterized,_incl._Response_to_organic_substance,_and_Identical_protein_binding


id: CL:3301
description: Mostly uncharacterized, incl. Identical protein binding, and Cysteine-type peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3301_Mostly_uncharacterized,_incl._Identical_protein_binding,_and_Cysteine-type_peptidase_activity


id: CL:3302
description: Mostly uncharacterized, incl. DDE transposase sub-family, and PilZ domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3302_Mostly_uncharacterized,_incl._DDE_transposase_sub-family,_and_PilZ_domain


id: CL:3305
description: Mostly uncharacterized, incl. PilZ domain, and Cell septum
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3305_Mostly_uncharacterized,_incl._PilZ_domain,_and_Cell_septum


id: CL:3309
description: Mixed, incl. PilZ domain, and Cell septum
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3309_Mixed,_incl._PilZ_domain,_and_Cell_septum


id: CL:3312
description: Mixed, incl. Response to lipid, and Protein processing
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3312_Mixed,_incl._Response_to_lipid,_and_Protein_processing


id: CL:3344
description: Mixed, incl. Cysteine-type peptidase activity, and Protein of unknown function DUF945
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3344_Mixed,_incl._Cysteine-type_peptidase_activity,_and_Protein_of_unknown_function_DUF945


id: CL:3346
description: Mixed, incl. Protein of unknown function DUF945, and Immunoglobulin E-set
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3346_Mixed,_incl._Protein_of_unknown_function_DUF945,_and_Immunoglobulin_E-set


id: CL:3347
description: Mixed, incl. Cysteine-type peptidase activity, and Protein of unknown function DUF945
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3347_Mixed,_incl._Cysteine-type_peptidase_activity,_and_Protein_of_unknown_function_DUF945


id: CL:3360
description: Mixed, incl. Immunoglobulin E-set, and Protein of unknown function DUF945
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3360_Mixed,_incl._Immunoglobulin_E-set,_and_Protein_of_unknown_function_DUF945


id: CL:3388
description: Mixed, incl. Serine-type exopeptidase activity, and OmpA family
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3388_Mixed,_incl._Serine-type_exopeptidase_activity,_and_OmpA_family


id: CL:3390
description: Mixed, incl. OmpA family, and Type-IV b secretion system, inner-membrane complex component
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3390_Mixed,_incl._OmpA_family,_and_Type-IV_b_secretion_system,_inner-membrane_complex_component


id: CL:3391
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3391_Mixed,_incl._Type-IV_b_secretion_system,_inner-membrane_complex_component,_and_Peptidoglycan-protein_cross-linking

description:
  Mixed, incl. Type-IV b secretion system, inner-membrane complex component, and Peptidoglycan-protein cross-linking


id: CL:3393
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3393_Mixed,_incl._Type-IV_b_secretion_system,_inner-membrane_complex_component,_and_Peptidoglycan-protein_cross-linking

description:
  Mixed, incl. Type-IV b secretion system, inner-membrane complex component, and Peptidoglycan-protein cross-linking


id: CL:340
description: Proton-transporting ATP synthase complex, coupling factor F(o), and ATP synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:340_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o),_and_ATP_synthase


id: CL:3409
description: Mixed, incl. HNH nucleases, and TraD/TraG, TraM recognition site
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3409_Mixed,_incl._HNH_nucleases,_and_TraD/TraG,_TraM_recognition_site


id: CL:3418
description: Mixed, incl. OmpA family, and Pentapeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3418_Mixed,_incl._OmpA_family,_and_Pentapeptide_repeat


id: CL:3422
description: Pentapeptide repeat, and Lipoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3422_Pentapeptide_repeat,_and_Lipoprotein


id: CL:3449
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3449_Mixed,_incl._Protein_of_unknown_function_DUF4442,_and_Transport-associated_and_nodulation_domain,_bacteria

description:
  Mixed, incl. Protein of unknown function DUF4442, and Transport-associated and nodulation domain, bacteria


id: CL:3461
description: Mixed, incl. Patatin-like phospholipase, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3461_Mixed,_incl._Patatin-like_phospholipase,_and_Signal


id: CL:3488
description: Mixed, incl. Membrane assembly, and Lipopolysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3488_Mixed,_incl._Membrane_assembly,_and_Lipopolysaccharide_transport


id: CL:3489
description: Mixed, incl. Membrane assembly, and Lipopolysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3489_Mixed,_incl._Membrane_assembly,_and_Lipopolysaccharide_transport


id: CL:3491
description: Membrane assembly, and Permease LptG/LptF-related
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3491_Membrane_assembly,_and_Permease_LptG/LptF-related


id: CL:3519
description: Mixed, incl. Elongator protein 3, MiaB family, Radical SAM, and Cell-substrate adhesion
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3519_Mixed,_incl._Elongator_protein_3,_MiaB_family,_Radical_SAM,_and_Cell-substrate_adhesion


id: CL:3530
description: Mostly uncharacterized, incl. Toxin metabolic process, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3530_Mostly_uncharacterized,_incl._Toxin_metabolic_process,_and_Periplasmic_binding_protein


id: CL:3532
description: Mixed, incl. Periplasmic binding protein, and Lipoprotein localisation LolA/LolB/LppX
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3532_Mixed,_incl._Periplasmic_binding_protein,_and_Lipoprotein_localisation_LolA/LolB/LppX


id: CL:3551
description: Mixed, incl. Protein import, and Cell cycle
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3551_Mixed,_incl._Protein_import,_and_Cell_cycle


id: CL:3553
description: Mixed, incl. Bacteriocin transport, and Periplasm
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3553_Mixed,_incl._Bacteriocin_transport,_and_Periplasm


id: CL:3555
description: Mixed, incl. Periplasm, and MotA/TolQ/ExbB proton channel
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3555_Mixed,_incl._Periplasm,_and_MotA/TolQ/ExbB_proton_channel


id: CL:3569
description: Mixed, incl. Aminomethyltransferase folate-binding domain, and Peptidoglycan binding
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3569_Mixed,_incl._Aminomethyltransferase_folate-binding_domain,_and_Peptidoglycan_binding


id: CL:357
description: Protein export, and Protein carrier chaperone
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:357_Protein_export,_and_Protein_carrier_chaperone


id: CL:3579
description: Mixed, incl. SecA DEAD-like domain, and Adenosine deaminase
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3579_Mixed,_incl._SecA_DEAD-like_domain,_and_Adenosine_deaminase


id: CL:3602
description: Mixed, incl. Secretion by the type IV secretion system, and TrbC/VIRB2 pilin
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3602_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_TrbC/VIRB2_pilin


id: CL:3604
description: Secretion by the type IV secretion system, and Conjugal transfer protein
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3604_Secretion_by_the_type_IV_secretion_system,_and_Conjugal_transfer_protein


id: CL:3607
description: Secretion by the type IV secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3607_Secretion_by_the_type_IV_secretion_system


id: CL:362
description: Protein transport by the Sec complex, and Glutamate-cysteine ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:362_Protein_transport_by_the_Sec_complex,_and_Glutamate-cysteine_ligase_activity


id: CL:3630
description: Mixed, incl. Secretion by the type IV secretion system, and VirB8 protein
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3630_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_VirB8_protein


id: CL:3633
description: Secretion by the type IV secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3633_Secretion_by_the_type_IV_secretion_system


id: CL:3655
description: Mixed, incl. Sel1-like repeat, and Peptidoglycan-protein cross-linking
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3655_Mixed,_incl._Sel1-like_repeat,_and_Peptidoglycan-protein_cross-linking


id: CL:3678
description: Mixed, incl. Prokaryotic N-terminal methylation site, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3678_Mixed,_incl._Prokaryotic_N-terminal_methylation_site,_and_Pilus_organization


id: CL:3680
description: Mixed, incl. Prokaryotic N-terminal methylation site, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3680_Mixed,_incl._Prokaryotic_N-terminal_methylation_site,_and_Pilus_organization


id: CL:3681
description: Type II protein secretion system complex, and Type II/IV secretion system protein
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3681_Type_II_protein_secretion_system_complex,_and_Type_II/IV_secretion_system_protein


id: CL:3683
description: Type II protein secretion system complex, and NolW-like
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3683_Type_II_protein_secretion_system_complex,_and_NolW-like


id: CL:3707
description: Type II/IV secretion system protein, and GspF/PilC family
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3707_Type_II/IV_secretion_system_protein,_and_GspF/PilC_family


id: CL:3717
description: Mixed, incl. Pilus assembly, and Pilin (bacterial filament)
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3717_Mixed,_incl._Pilus_assembly,_and_Pilin_(bacterial_filament)


id: CL:3753
description: Mixed, incl. ProQ/FINO family, and Phosphate transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3753_Mixed,_incl._ProQ/FINO_family,_and_Phosphate_transporter


id: CL:3776
description: Mixed, incl. TAM protein secretion complex, and Ion channel
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3776_Mixed,_incl._TAM_protein_secretion_complex,_and_Ion_channel


id: CL:3789
description: Mixed, incl. Signal, and DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3789_Mixed,_incl._Signal,_and_DNA_binding


id: CL:3790
description: Mixed, incl. Signal, and beta-Lactam resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3790_Mixed,_incl._Signal,_and_beta-Lactam_resistance


id: CL:3792
description: Mixed, incl. Signal, and beta-Lactam resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3792_Mixed,_incl._Signal,_and_beta-Lactam_resistance


id: CL:3793
description: Mixed, incl. Signal, and Intracellular protein-containing complex
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3793_Mixed,_incl._Signal,_and_Intracellular_protein-containing_complex


id: CL:3795
description: Mixed, incl. Signal, and Class I MHC mediated antigen processing & presentation
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3795_Mixed,_incl._Signal,_and_Class_I_MHC_mediated_antigen_processing_&_presentation


id: CL:3797
description: Mixed, incl. Intracellular protein-containing complex, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3797_Mixed,_incl._Intracellular_protein-containing_complex,_and_Signal


id: CL:3798
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3798_Mostly_uncharacterized,_incl._F_plasmid_transfer_operon_protein,_and_Cellular_macromolecule_catabolic_process

description:
  Mostly uncharacterized, incl. F plasmid transfer operon protein, and Cellular macromolecule catabolic process


id: CL:3799
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3799_Mostly_uncharacterized,_incl._F_plasmid_transfer_operon_protein,_and_Protein_transmembrane_transport

description:
  Mostly uncharacterized, incl. F plasmid transfer operon protein, and Protein transmembrane transport


id: CL:3801
description: Mostly uncharacterized, incl. F plasmid transfer operon protein, and TraU
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3801_Mostly_uncharacterized,_incl._F_plasmid_transfer_operon_protein,_and_TraU


id: CL:3803
description: Mixed, incl. F plasmid transfer operon protein, and TraU
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3803_Mixed,_incl._F_plasmid_transfer_operon_protein,_and_TraU


id: CL:3806
description: Mixed, incl. F plasmid transfer operon protein, and TraU
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3806_Mixed,_incl._F_plasmid_transfer_operon_protein,_and_TraU


id: CL:3808
description: F plasmid transfer operon protein, and Defense response
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3808_F_plasmid_transfer_operon_protein,_and_Defense_response


id: CL:3846
description: Mixed, incl. RDD family, and Multiheme cytochrome superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3846_Mixed,_incl._RDD_family,_and_Multiheme_cytochrome_superfamily


id: CL:3860
description: Mixed, incl. Peptidase S33, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3860_Mixed,_incl._Peptidase_S33,_and_Periplasmic_binding_protein


id: CL:3861
description: Mixed, incl. Positive regulation of translational initiation, and DNA replication initiation
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3861_Mixed,_incl._Positive_regulation_of_translational_initiation,_and_DNA_replication_initiation


id: CL:3870
description: Mixed, incl. Peptidase S33, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3870_Mixed,_incl._Peptidase_S33,_and_Periplasmic_binding_protein


id: CL:3879
description: Mixed, incl. Class I MHC mediated antigen processing & presentation, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3879_Mixed,_incl._Class_I_MHC_mediated_antigen_processing_&_presentation,_and_Sulfur_metabolism


id: CL:388
description: Mixed, incl. GTP binding domain, and Pseudouridine synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:388_Mixed,_incl._GTP_binding_domain,_and_Pseudouridine_synthase_activity


id: CL:3883
description: Mostly uncharacterized, incl. Sulfur metabolism, and Pore complex
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3883_Mostly_uncharacterized,_incl._Sulfur_metabolism,_and_Pore_complex


id: CL:3887
description: Mixed, incl. Pore complex, and Histone deacetylase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3887_Mixed,_incl._Pore_complex,_and_Histone_deacetylase_domain


id: CL:389
description: Mixed, incl. Pseudouridine synthase activity, and DnaJ domain, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:389_Mixed,_incl._Pseudouridine_synthase_activity,_and_DnaJ_domain,_conserved_site


id: CL:3890
description: Mixed, incl. Pore complex, and Metallo-dependent phosphatase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3890_Mixed,_incl._Pore_complex,_and_Metallo-dependent_phosphatase-like


id: CL:392
description: Mixed, incl. Pseudouridine synthase activity, and RNA helicase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:392_Mixed,_incl._Pseudouridine_synthase_activity,_and_RNA_helicase_activity


id: CL:3920
description: Mixed, incl. NADAR, and Zinc ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3920_Mixed,_incl._NADAR,_and_Zinc_ion_transport


id: CL:3941
description: Mixed, incl. Extracellular region, and Sister chromatid cohesion
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3941_Mixed,_incl._Extracellular_region,_and_Sister_chromatid_cohesion


id: CL:3942
description: Mixed, incl. Glycoside hydrolase, family 5, and Serine protease
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3942_Mixed,_incl._Glycoside_hydrolase,_family_5,_and_Serine_protease


id: CL:3945
description: Mixed, incl. Peptidase M4, and Chromosome partition
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3945_Mixed,_incl._Peptidase_M4,_and_Chromosome_partition


id: CL:3989
description: Six-hairpin glycosidase-like superfamily, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3989_Six-hairpin_glycosidase-like_superfamily,_and_Signal


id: CL:3999
description: Mixed, incl. Siderophore metabolic process, and Regulation of DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:3999_Mixed,_incl._Siderophore_metabolic_process,_and_Regulation_of_DNA_replication


id: CL:4020
description: Mixed, incl. DNA alkylation, and Nucleotidyl transferase AbiEii toxin, Type IV TA system
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4020_Mixed,_incl._DNA_alkylation,_and_Nucleotidyl_transferase_AbiEii_toxin,_Type_IV_TA_system


id: CL:4029
description: Mostly uncharacterized, incl. DNA integration, and Antirestriction
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4029_Mostly_uncharacterized,_incl._DNA_integration,_and_Antirestriction


id: CL:4031
description: Mostly uncharacterized, incl. DNA integration, and Leucine-rich repeat domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4031_Mostly_uncharacterized,_incl._DNA_integration,_and_Leucine-rich_repeat_domain_superfamily


id: CL:4032
description: Mixed, incl. DNA integration, and Leucine-rich repeat domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4032_Mixed,_incl._DNA_integration,_and_Leucine-rich_repeat_domain_superfamily


id: CL:4034
description: Mixed, incl. DNA integration, and Leucine-rich repeat domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4034_Mixed,_incl._DNA_integration,_and_Leucine-rich_repeat_domain_superfamily


id: CL:4035
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4035_Mostly_uncharacterized,_incl._Leucine-rich_repeat_domain_superfamily,_and_Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds

description:
  Mostly uncharacterized, incl. Leucine-rich repeat domain superfamily, and Hydrolase activity, hydrolyzing O-glycosyl compounds


id: CL:4037
description: Mostly uncharacterized, incl. Hydrolase activity, hydrolyzing O-glycosyl compounds, and TraU
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4037_Mostly_uncharacterized,_incl._Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds,_and_TraU


id: CL:4038
description: Mostly uncharacterized, incl. TraU, and TraC protein
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4038_Mostly_uncharacterized,_incl._TraU,_and_TraC_protein


id: CL:4040
description: Mixed, incl. TraU, and TraC protein
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4040_Mixed,_incl._TraU,_and_TraC_protein


id: CL:4064
description: Mixed, incl. DNA replication initiation, and Phosphorelay signal transduction system
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4064_Mixed,_incl._DNA_replication_initiation,_and_Phosphorelay_signal_transduction_system


id: CL:4083
description: Mixed, incl. Membrane fusion protein, biotin-lipoyl like domain, and LysR, substrate-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4083_Mixed,_incl._Membrane_fusion_protein,_biotin-lipoyl_like_domain,_and_LysR,_substrate-binding


id: CL:4094
description: Integrase-like, catalytic domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4094_Integrase-like,_catalytic_domain_superfamily


id: CL:4113
description: Mixed, incl. Antirestriction, and Single-stranded DNA-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4113_Mixed,_incl._Antirestriction,_and_Single-stranded_DNA-binding_protein


id: CL:4127
description: Mixed, incl. Peptide deformylase, and Single-species biofilm formation
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4127_Mixed,_incl._Peptide_deformylase,_and_Single-species_biofilm_formation


id: CL:413
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:413_Mixed,_incl._rRNA_(guanine-N7)-methylation,_and_GTP-binding_protein_TrmE/Aminomethyltransferase_GcvT,_domain_1

description:
  Mixed, incl. rRNA (guanine-N7)-methylation, and GTP-binding protein TrmE/Aminomethyltransferase GcvT, domain 1


id: CL:4138
description: Mixed, incl. GNAT domain, and Amino acid/polyamine transporter 2
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4138_Mixed,_incl._GNAT_domain,_and_Amino_acid/polyamine_transporter_2


id: CL:4139
description: Mixed, incl. GNAT domain, and Amino acid/polyamine transporter 2
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4139_Mixed,_incl._GNAT_domain,_and_Amino_acid/polyamine_transporter_2


id: CL:4141
description: Mixed, incl. GNAT domain, and Amino acid/polyamine transporter 2
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4141_Mixed,_incl._GNAT_domain,_and_Amino_acid/polyamine_transporter_2


id: CL:4142
description: Mixed, incl. Acetyltransferase (GNAT) domain, and Amino acid kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4142_Mixed,_incl._Acetyltransferase_(GNAT)_domain,_and_Amino_acid_kinase_activity


id: CL:4145
description: Acetyltransferase (GNAT) domain, and Amino acid kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4145_Acetyltransferase_(GNAT)_domain,_and_Amino_acid_kinase_activity


id: CL:4162
description: Amino acid/polyamine transporter 2, and Ammonia-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4162_Amino_acid/polyamine_transporter_2,_and_Ammonia-lyase_activity


id: CL:4185
description: Mixed, incl. Peroxidase, and Ion channel
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4185_Mixed,_incl._Peroxidase,_and_Ion_channel


id: CL:4195
description: Mixed, incl. HDOD domain, and Dimeric alpha-beta barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4195_Mixed,_incl._HDOD_domain,_and_Dimeric_alpha-beta_barrel


id: CL:4212
description: Mixed, incl. 3D domain, and Maf-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4212_Mixed,_incl._3D_domain,_and_Maf-like_protein


id: CL:4233
description: Mixed, incl. Transporter activity, and Outer membrane-bounded periplasmic space
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4233_Mixed,_incl._Transporter_activity,_and_Outer_membrane-bounded_periplasmic_space


id: CL:4234
description: Mixed, incl. beta-Lactam resistance, and HlyD family secretion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4234_Mixed,_incl._beta-Lactam_resistance,_and_HlyD_family_secretion_protein


id: CL:4235
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4235_Mixed,_incl._RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain,_and_Multidrug_efflux_transporter_AcrB_TolC_docking_domain,_DN/DC_subdomains

description:
  Mixed, incl. RND efflux pump, membrane fusion protein, barrel-sandwich domain, and Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains


id: CL:4236
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4236_Mixed,_incl._RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain,_and_Multidrug_efflux_transporter_AcrB_TolC_docking_domain,_DN/DC_subdomains

description:
  Mixed, incl. RND efflux pump, membrane fusion protein, barrel-sandwich domain, and Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains


id: CL:4237
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4237_Mixed,_incl._Multidrug_efflux_transporter_AcrB_TolC_docking_domain,_DN/DC_subdomains,_and_RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain

description:
  Mixed, incl. Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains, and RND efflux pump, membrane fusion protein, barrel-sandwich domain


id: CL:4238
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4238_Mixed,_incl._Multidrug_efflux_transporter_AcrB_TolC_docking_domain,_DN/DC_subdomains,_and_RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain

description:
  Mixed, incl. Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains, and RND efflux pump, membrane fusion protein, barrel-sandwich domain


id: CL:4239
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4239_Multidrug_efflux_transporter_AcrB_TolC_docking_domain,_DN/DC_subdomains,_and_RND_efflux_pump,_membrane_fusion_protein

description:
  Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains, and RND efflux pump, membrane fusion protein


id: CL:4240
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4240_Multidrug_efflux_transporter_AcrB_TolC_docking_domain,_DN/DC_subdomains,_and_RND_efflux_pump,_membrane_fusion_protein

description:
  Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains, and RND efflux pump, membrane fusion protein


id: CL:4241
description: MMPL family, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4241_MMPL_family,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:4243
description: Efflux pump complex, and Xenobiotic transport
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4243_Efflux_pump_complex,_and_Xenobiotic_transport


id: CL:425
description: Aminoacyl-tRNA biosynthesis, and Amidase
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:425_Aminoacyl-tRNA_biosynthesis,_and_Amidase


id: CL:4255
description: Hydrophobe/amphiphile efflux-1 HAE1, and Transmembrane beta strand
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4255_Hydrophobe/amphiphile_efflux-1_HAE1,_and_Transmembrane_beta_strand


id: CL:4265
description: Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA, and Outer membrane efflux protein
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4265_Cation_efflux_system_CzcA/CusA/SilA/NccA/HelA/CnrA,_and_Outer_membrane_efflux_protein


id: CL:4281
description: Mixed, incl. AcrB/AcrD/AcrF family, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4281_Mixed,_incl._AcrB/AcrD/AcrF_family,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:4291
description: Mixed, incl. AcrB/AcrD/AcrF family, and Negative regulation of RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4291_Mixed,_incl._AcrB/AcrD/AcrF_family,_and_Negative_regulation_of_RNA_metabolic_process


id: CL:430
description: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:430_Aminoacyl-tRNA_synthetase,_class_Ia,_anticodon-binding


id: CL:4306
description: Mixed, incl. Thymidine phosphorylase activity, and Ribose-phosphate pyrophosphokinase
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4306_Mixed,_incl._Thymidine_phosphorylase_activity,_and_Ribose-phosphate_pyrophosphokinase


id: CL:4322
description: Mixed, incl. Lipoprotein transport, and Ubiquinone biosynthesis hydroxylase UbiH/COQ6
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4322_Mixed,_incl._Lipoprotein_transport,_and_Ubiquinone_biosynthesis_hydroxylase_UbiH/COQ6


id: CL:4324
description: Ubiquinone biosynthesis hydroxylase UbiH/COQ6, and Peptidase M24
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4324_Ubiquinone_biosynthesis_hydroxylase_UbiH/COQ6,_and_Peptidase_M24


id: CL:4341
description: Lipoprotein transport, and Cation efflux system protein CusB, domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4341_Lipoprotein_transport,_and_Cation_efflux_system_protein_CusB,_domain_1


id: CL:4353
description: Mixed, incl. Fusaric acid resistance protein-like, and Cation efflux system protein CusB, domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4353_Mixed,_incl._Fusaric_acid_resistance_protein-like,_and_Cation_efflux_system_protein_CusB,_domain_1


id: CL:4364
description: Mixed, incl. Type 1 protein exporter, and Type I secretion membrane fusion protein, HlyD family
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4364_Mixed,_incl._Type_1_protein_exporter,_and_Type_I_secretion_membrane_fusion_protein,_HlyD_family


id: CL:4365
description: Mixed, incl. Type 1 protein exporter, and Type I secretion membrane fusion protein, HlyD family
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4365_Mixed,_incl._Type_1_protein_exporter,_and_Type_I_secretion_membrane_fusion_protein,_HlyD_family


id: CL:4366
description: Mixed, incl. Type 1 protein exporter, and Type I secretion membrane fusion protein, HlyD family
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4366_Mixed,_incl._Type_1_protein_exporter,_and_Type_I_secretion_membrane_fusion_protein,_HlyD_family


id: CL:4368
description: Mixed, incl. Type I secretion membrane fusion protein, HlyD family, and Type 1 protein exporter
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4368_Mixed,_incl._Type_I_secretion_membrane_fusion_protein,_HlyD_family,_and_Type_1_protein_exporter


id: CL:4370
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4370_Mixed,_incl._Secretion_protein_HlyD,_conserved_site,_and_Type_I_secretion_outer_membrane_protein,_TolC

description:
  Mixed, incl. Secretion protein HlyD, conserved site, and Type I secretion outer membrane protein, TolC


id: CL:4388
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4388_Mixed,_incl._Antibiotic_metabolic_process,_and_Type_I_secretion_membrane_fusion_protein,_HlyD_family

description:
  Mixed, incl. Antibiotic metabolic process, and Type I secretion membrane fusion protein, HlyD family


id: CL:4408
description: Type 1 protein exporter, and HlyD family secretion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4408_Type_1_protein_exporter,_and_HlyD_family_secretion_protein


id: CL:4419
description: Mixed, incl. Beta-lactamase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4419_Mixed,_incl._Beta-lactamase_activity


id: CL:4429
description: Mixed, incl. Acylphosphatase-like domain superfamily, and Thioesterase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4429_Mixed,_incl._Acylphosphatase-like_domain_superfamily,_and_Thioesterase_domain


id: CL:4442
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4442_Mostly_uncharacterized,_incl._Quorum_sensing,_and_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups

description:
  Mostly uncharacterized, incl. Quorum sensing, and Transferase activity, transferring alkyl or aryl (other than methyl) groups


id: CL:4443
description: Mixed, incl. Glycerolipid metabolism, and Cellular response to pH
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4443_Mixed,_incl._Glycerolipid_metabolism,_and_Cellular_response_to_pH


id: CL:4445
description: Mixed, incl. Glutathione transferase activity, and Regulation of nitric oxide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4445_Mixed,_incl._Glutathione_transferase_activity,_and_Regulation_of_nitric_oxide_metabolic_process


id: CL:4460
description: Mixed, incl. Cellular response to pH, and Zinc-binding dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4460_Mixed,_incl._Cellular_response_to_pH,_and_Zinc-binding_dehydrogenase


id: CL:4473
description: Mixed, incl. Quorum sensing, and Transglycosylase
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4473_Mixed,_incl._Quorum_sensing,_and_Transglycosylase


id: CL:4493
description: Mixed, incl. Cytochrome complex assembly, and Positive regulation of biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4493_Mixed,_incl._Cytochrome_complex_assembly,_and_Positive_regulation_of_biosynthetic_process


id: CL:4494
description: Mostly uncharacterized, incl. Fumarate metabolic process, and Prokaryotic cytochrome b561
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4494_Mostly_uncharacterized,_incl._Fumarate_metabolic_process,_and_Prokaryotic_cytochrome_b561


id: CL:4495
description: Mixed, incl. Regulation of nitric oxide metabolic process, and Transglycosylase SLT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4495_Mixed,_incl._Regulation_of_nitric_oxide_metabolic_process,_and_Transglycosylase_SLT_domain


id: CL:4497
description: Mixed, incl. Regulation of nitric oxide metabolic process, and CBS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4497_Mixed,_incl._Regulation_of_nitric_oxide_metabolic_process,_and_CBS_domain


id: CL:4515
description: Mixed, incl. DUF34/NIF3 superfamily, and CDP-alcohol phosphatidyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4515_Mixed,_incl._DUF34/NIF3_superfamily,_and_CDP-alcohol_phosphatidyltransferase


id: CL:4529
description: Cytochrome complex assembly, and Dodecin
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4529_Cytochrome_complex_assembly,_and_Dodecin


id: CL:4556
description: Mixed, incl. ABC transporters, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4556_Mixed,_incl._ABC_transporters,_and_Nitrogen_metabolism


id: CL:4557
description: Mixed, incl. ABC transporters, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4557_Mixed,_incl._ABC_transporters,_and_Nitrogen_metabolism


id: CL:4558
description: Mixed, incl. MetI-like superfamily, and ATP-binding cassette (ABC) transporter complex
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4558_Mixed,_incl._MetI-like_superfamily,_and_ATP-binding_cassette_(ABC)_transporter_complex


id: CL:4559
description: Mixed, incl. MetI-like superfamily, and Polyamine transport
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4559_Mixed,_incl._MetI-like_superfamily,_and_Polyamine_transport


id: CL:456
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, and Amidase
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:456_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity,_and_Amidase


id: CL:4560
description: Mixed, incl. MetI-like superfamily, and Polyamine transport
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4560_Mixed,_incl._MetI-like_superfamily,_and_Polyamine_transport


id: CL:4561
description: Mixed, incl. Polyamine transport, and ABC-type polyamine transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4561_Mixed,_incl._Polyamine_transport,_and_ABC-type_polyamine_transporter_activity


id: CL:4574
description: MetI-like superfamily, and Oligopeptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4574_MetI-like_superfamily,_and_Oligopeptide_transport


id: CL:4585
description: Mixed, incl. MetI-like superfamily, and Molybdate/tungstate binding, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4585_Mixed,_incl._MetI-like_superfamily,_and_Molybdate/tungstate_binding,_C-terminal


id: CL:4602
description: Mixed, incl. Nitrogen metabolism, and ATP-binding cassette (ABC) transporter complex
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4602_Mixed,_incl._Nitrogen_metabolism,_and_ATP-binding_cassette_(ABC)_transporter_complex


id: CL:4604
description: Mixed, incl. Carbonic anhydrase, and Carnitine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4604_Mixed,_incl._Carbonic_anhydrase,_and_Carnitine_metabolic_process


id: CL:4619
description: Mixed, incl. Monosaccharide binding, and ABC-2 type transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4619_Mixed,_incl._Monosaccharide_binding,_and_ABC-2_type_transporter


id: CL:4630
description: Phospholipid transport, and ABC-type transport auxiliary lipoprotein component
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4630_Phospholipid_transport,_and_ABC-type_transport_auxiliary_lipoprotein_component


id: CL:4632
description: Phospholipid transport, and ABC-type transport auxiliary lipoprotein component
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4632_Phospholipid_transport,_and_ABC-type_transport_auxiliary_lipoprotein_component


id: CL:4677
description: Methionine transport, and Amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4677_Methionine_transport,_and_Amino_acid_transport


id: CL:4691
description: Mixed, incl. Histidine metabolism, and Sulfuric ester hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4691_Mixed,_incl._Histidine_metabolism,_and_Sulfuric_ester_hydrolase_activity


id: CL:4693
description: Sulfuric ester hydrolase activity, and Histidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4693_Sulfuric_ester_hydrolase_activity,_and_Histidine_metabolism


id: CL:4715
description: Mixed, incl. 4Fe-4S single cluster domain, and 4-hydroxyphenylpyruvate dioxygenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4715_Mixed,_incl._4Fe-4S_single_cluster_domain,_and_4-hydroxyphenylpyruvate_dioxygenase_activity


id: CL:4724
description: Mostly uncharacterized, incl. Thiamine metabolic process, and CsbD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4724_Mostly_uncharacterized,_incl._Thiamine_metabolic_process,_and_CsbD-like


id: CL:4725
description: Mostly uncharacterized, incl. CsbD-like, and Potassium transport
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4725_Mostly_uncharacterized,_incl._CsbD-like,_and_Potassium_transport


id: CL:4726
description: Mixed, incl. CsbD-like, and Potassium transport
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4726_Mixed,_incl._CsbD-like,_and_Potassium_transport


id: CL:4728
description: Mixed, incl. Potassium transport, and HNH nucleases
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4728_Mixed,_incl._Potassium_transport,_and_HNH_nucleases


id: CL:4742
description: Mixed, incl. CsbD-like, and Ferric iron binding
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4742_Mixed,_incl._CsbD-like,_and_Ferric_iron_binding


id: CL:4755
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4755_Mixed,_incl._Acetyltransferase_(GNAT)_domain,_and_Biological_process_involved_in_interspecies_interaction_between_organisms

description:
  Mixed, incl. Acetyltransferase (GNAT) domain, and Biological process involved in interspecies interaction between organisms


id: CL:4757
description: Acetyltransferase (GNAT) domain, and ATP-grasp fold, RimK-type
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4757_Acetyltransferase_(GNAT)_domain,_and_ATP-grasp_fold,_RimK-type


id: CL:476
description: Transcription, DNA-templated, and DEAD-like helicases superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:476_Transcription,_DNA-templated,_and_DEAD-like_helicases_superfamily


id: CL:4772
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4772_Mixed,_incl._Mutator_MutT-like,_and_Biological_process_involved_in_interspecies_interaction_between_organisms

description:
  Mixed, incl. Mutator MutT-like, and Biological process involved in interspecies interaction between organisms


id: CL:4784
description: Mixed, incl. Thiamine metabolic process, and Ion channel
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4784_Mixed,_incl._Thiamine_metabolic_process,_and_Ion_channel


id: CL:4785
description: Mixed, incl. Thiamine metabolic process, and Ion channel
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4785_Mixed,_incl._Thiamine_metabolic_process,_and_Ion_channel


id: CL:4788
description: Mixed, incl. NusB family, and ATP-cone domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4788_Mixed,_incl._NusB_family,_and_ATP-cone_domain


id: CL:479
description: RNA polymerase, and DEAD-like helicases superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:479_RNA_polymerase,_and_DEAD-like_helicases_superfamily


id: CL:4803
description: Thiamine metabolic process, and Ion channel
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4803_Thiamine_metabolic_process,_and_Ion_channel


id: CL:4823
description: Mixed, incl. Base excision repair, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4823_Mixed,_incl._Base_excision_repair,_and_Sporulation


id: CL:4824
description: Mixed, incl. Base excision repair, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4824_Mixed,_incl._Base_excision_repair,_and_Sporulation


id: CL:4825
description: Mixed, incl. Base excision repair, and Non-homologous end-joining
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4825_Mixed,_incl._Base_excision_repair,_and_Non-homologous_end-joining


id: CL:4826
description: Mixed, incl. ATP dependent DNA ligase domain, and Nucleus
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4826_Mixed,_incl._ATP_dependent_DNA_ligase_domain,_and_Nucleus


id: CL:4828
description: Non-homologous end-joining, and MAPEG family
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4828_Non-homologous_end-joining,_and_MAPEG_family


id: CL:4840
description: Mixed, incl. ATP dependent DNA ligase domain, and HIT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4840_Mixed,_incl._ATP_dependent_DNA_ligase_domain,_and_HIT_domain


id: CL:4851
description: Base-excision repair, and AP endonuclease 1
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4851_Base-excision_repair,_and_AP_endonuclease_1


id: CL:4870
description: Mixed, incl. Protein of unknown function DUF421, and Nucleoside recognition
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4870_Mixed,_incl._Protein_of_unknown_function_DUF421,_and_Nucleoside_recognition


id: CL:4872
description: Mixed, incl. Protein of unknown function DUF421, and Cation efflux family
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4872_Mixed,_incl._Protein_of_unknown_function_DUF421,_and_Cation_efflux_family


id: CL:4888
description: Mixed, incl. DNA-templated transcription, termination, and Enoyl-(Acyl carrier protein) reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4888_Mixed,_incl._DNA-templated_transcription,_termination,_and_Enoyl-(Acyl_carrier_protein)_reductase


id: CL:4900
description: Mixed, incl. Dienelactone hydrolase family, and Phosphoribosyl transferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4900_Mixed,_incl._Dienelactone_hydrolase_family,_and_Phosphoribosyl_transferase_domain


id: CL:4918
description: Mixed, incl. ParB/Sulfiredoxin, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4918_Mixed,_incl._ParB/Sulfiredoxin,_and_AAA_domain


id: CL:4921
description: Mixed, incl. ParB/Sulfiredoxin, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4921_Mixed,_incl._ParB/Sulfiredoxin,_and_AAA_domain


id: CL:495
description: Sigma-70 factor, region 1.2, and MerR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:495_Sigma-70_factor,_region_1.2,_and_MerR-type_HTH_domain


id: CL:4950
description: dGTP catabolic process, and Leucine-rich repeat domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4950_dGTP_catabolic_process,_and_Leucine-rich_repeat_domain_superfamily


id: CL:4967
description: Mixed, incl. UTP metabolic process, and Regulation of signaling
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4967_Mixed,_incl._UTP_metabolic_process,_and_Regulation_of_signaling


id: CL:4983
description: Mixed, incl. Major facilitator superfamily, and LysR, substrate-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4983_Mixed,_incl._Major_facilitator_superfamily,_and_LysR,_substrate-binding


id: CL:4984
description: Mixed, incl. Major facilitator superfamily, and LysR, substrate-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4984_Mixed,_incl._Major_facilitator_superfamily,_and_LysR,_substrate-binding


id: CL:4985
description: Mixed, incl. Major facilitator superfamily, and YceI-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4985_Mixed,_incl._Major_facilitator_superfamily,_and_YceI-like_domain


id: CL:4987
description: Mixed, incl. YceI-like domain, and Prokaryotic cytochrome b561
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:4987_Mixed,_incl._YceI-like_domain,_and_Prokaryotic_cytochrome_b561


id: CL:5009
description: Mixed, incl. Ferric-uptake regulator, and Sugar (and other) transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5009_Mixed,_incl._Ferric-uptake_regulator,_and_Sugar_(and_other)_transporter


id: CL:5024
description: Mixed, incl. LysR, substrate-binding, and HTH domain AraC-type, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5024_Mixed,_incl._LysR,_substrate-binding,_and_HTH_domain_AraC-type,_conserved_site


id: CL:5025
description: Mixed, incl. LysR, substrate-binding, and HTH domain AraC-type, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5025_Mixed,_incl._LysR,_substrate-binding,_and_HTH_domain_AraC-type,_conserved_site


id: CL:5026
description: Mixed, incl. HTH domain AraC-type, conserved site, and EamA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5026_Mixed,_incl._HTH_domain_AraC-type,_conserved_site,_and_EamA_domain


id: CL:5037
description: LysR, substrate-binding, and Endonuclease/exonuclease/phosphatase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5037_LysR,_substrate-binding,_and_Endonuclease/exonuclease/phosphatase_superfamily


id: CL:5047
description: Organic anion transmembrane transporter activity, and Cupin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5047_Organic_anion_transmembrane_transporter_activity,_and_Cupin_domain


id: CL:5059
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5059_Mixed,_incl._DrrA_phosphatidylinositol_4-phosphate_binding_domain,_and_DEAD/DEAH_box_helicase_domain

description:
  Mixed, incl. DrrA phosphatidylinositol 4-phosphate binding domain, and DEAD/DEAH box helicase domain


id: CL:5073
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5073_Mixed,_incl._Cryptochrome/DNA_photolyase,_FAD-binding_domain-like_superfamily,_and_DrrA_phosphatidylinositol_4-phosphate_binding_domain

description:
  Mixed, incl. Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily, and DrrA phosphatidylinositol 4-phosphate binding domain


id: CL:5076
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5076_Mixed,_incl._Cryptochrome/DNA_photolyase,_FAD-binding_domain-like_superfamily,_and_Steroid_biosynthesis

description:
  Mixed, incl. Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily, and Steroid biosynthesis


id: CL:5099
description: Mixed, incl. Cro/C1-type helix-turn-helix domain, and Negative regulation of biological process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5099_Mixed,_incl._Cro/C1-type_helix-turn-helix_domain,_and_Negative_regulation_of_biological_process


id: CL:5100
description: Mixed, incl. Core-binding (CB) domain, and Cro/C1-type helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5100_Mixed,_incl._Core-binding_(CB)_domain,_and_Cro/C1-type_helix-turn-helix_domain


id: CL:5102
description: Mixed, incl. Core-binding (CB) domain, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5102_Mixed,_incl._Core-binding_(CB)_domain,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:5103
description: Mostly uncharacterized, incl. DNA-binding transcription repressor activity, and Integrase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5103_Mostly_uncharacterized,_incl._DNA-binding_transcription_repressor_activity,_and_Integrase_activity


id: CL:5105
description: Mixed, incl. DNA-binding transcription repressor activity, and Integrase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5105_Mixed,_incl._DNA-binding_transcription_repressor_activity,_and_Integrase_activity


id: CL:512
description: Mixed, incl. NusB family, and Formyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:512_Mixed,_incl._NusB_family,_and_Formyl_transferase


id: CL:5120
description: Mixed, incl. Peptidase C39 family, and Peptidyl-lysine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5120_Mixed,_incl._Peptidase_C39_family,_and_Peptidyl-lysine_modification


id: CL:5130
description: Mixed, incl. Sub-family of tyrosine recombinases, and LexA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5130_Mixed,_incl._Sub-family_of_tyrosine_recombinases,_and_LexA-like


id: CL:5150
description: Mixed, incl. Cro/C1-type helix-turn-helix domain, and Endoribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5150_Mixed,_incl._Cro/C1-type_helix-turn-helix_domain,_and_Endoribonuclease_activity


id: CL:5151
description: Mixed, incl. Cro/C1-type helix-turn-helix domain, and HipA-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5151_Mixed,_incl._Cro/C1-type_helix-turn-helix_domain,_and_HipA-like,_C-terminal


id: CL:5153
description: Toxin-antitoxin complex, and Helicase
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5153_Toxin-antitoxin_complex,_and_Helicase


id: CL:5169
description: Mixed, incl. Toxin HigB-like, and Cro/C1-type helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5169_Mixed,_incl._Toxin_HigB-like,_and_Cro/C1-type_helix-turn-helix_domain


id: CL:5182
description: Mixed, incl. RNA-directed DNA polymerase, and Conjugal transfer protein TraD
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5182_Mixed,_incl._RNA-directed_DNA_polymerase,_and_Conjugal_transfer_protein_TraD


id: CL:5200
description: Mostly uncharacterized, incl. FMN binding, and Phenazine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5200_Mostly_uncharacterized,_incl._FMN_binding,_and_Phenazine_biosynthesis


id: CL:5202
description: Mixed, incl. Phenazine biosynthesis, and Winged helix DNA-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5202_Mixed,_incl._Phenazine_biosynthesis,_and_Winged_helix_DNA-binding_domain_superfamily


id: CL:5222
description: Mixed, incl. Xenobiotic metabolic process, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5222_Mixed,_incl._Xenobiotic_metabolic_process,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:5236
description: Mixed, incl. Amino acid permease, and Amino acid permease
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5236_Mixed,_incl._Amino_acid_permease,_and_Amino_acid_permease


id: CL:5237
description: Mixed, incl. Amino acid permease, and Amino acid permease
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5237_Mixed,_incl._Amino_acid_permease,_and_Amino_acid_permease


id: CL:5240
description: Mixed, incl. Amino acid permease, and Amino acid permease
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5240_Mixed,_incl._Amino_acid_permease,_and_Amino_acid_permease


id: CL:5242
description: Mixed, incl. Amino acid permease, and Amino acid permease
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5242_Mixed,_incl._Amino_acid_permease,_and_Amino_acid_permease


id: CL:5244
description: Amino acid/polyamine transporter I, and Amino acid permease/ SLC12A domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5244_Amino_acid/polyamine_transporter_I,_and_Amino_acid_permease/_SLC12A_domain


id: CL:5246
description: Amino acid permease, and Amino acid permease
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5246_Amino_acid_permease,_and_Amino_acid_permease


id: CL:5262
description: Mixed, incl. Amidohydrolase family, and FAD-linked oxidase-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5262_Mixed,_incl._Amidohydrolase_family,_and_FAD-linked_oxidase-like,_C-terminal


id: CL:527
description: Mixed, incl. RelA/SpoT, and ABC transporter Uup, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:527_Mixed,_incl._RelA/SpoT,_and_ABC_transporter_Uup,_C-terminal


id: CL:5290
description: Mixed, incl. DNA dealkylation, and Sphingoid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5290_Mixed,_incl._DNA_dealkylation,_and_Sphingoid_catabolic_process


id: CL:5308
description: Mixed, incl. Response to pH, and Dicarboxylic acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5308_Mixed,_incl._Response_to_pH,_and_Dicarboxylic_acid_transport


id: CL:5321
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5321_Mostly_uncharacterized,_incl._PmbA/TldA_metallopeptidase_domain_1,_and_Peptidoglycan_catabolic_process

description:
  Mostly uncharacterized, incl. PmbA/TldA metallopeptidase domain 1, and Peptidoglycan catabolic process


id: CL:5323
description: Mixed, incl. PmbA/TldA metallopeptidase domain 1, and Peptidoglycan catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5323_Mixed,_incl._PmbA/TldA_metallopeptidase_domain_1,_and_Peptidoglycan_catabolic_process


id: CL:5325
description: PmbA/TldA metallopeptidase domain 1, and Regulation of cell death
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5325_PmbA/TldA_metallopeptidase_domain_1,_and_Regulation_of_cell_death


id: CL:5339
description: Mixed, incl. Peptidoglycan catabolic process, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5339_Mixed,_incl._Peptidoglycan_catabolic_process,_and_MacB,_ATP-binding_domain


id: CL:5354
description: Mixed, incl. CorA, cytoplasmic domain, and Glutamate--cysteine ligase, GCS2
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5354_Mixed,_incl._CorA,_cytoplasmic_domain,_and_Glutamate--cysteine_ligase,_GCS2


id: CL:5369
description: Mixed, incl. AAA domain, and YqgF/RNase H-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5369_Mixed,_incl._AAA_domain,_and_YqgF/RNase_H-like_domain


id: CL:537
description: Mixed, incl. MAPEG family, and Methyltransferase HemK-like
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:537_Mixed,_incl._MAPEG_family,_and_Methyltransferase_HemK-like


id: CL:5370
description: Mixed, incl. AAA domain, and Peroxiredoxin, AhpC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5370_Mixed,_incl._AAA_domain,_and_Peroxiredoxin,_AhpC-type


id: CL:5379
description: Mixed, incl. YqgF/RNase H-like domain, and Thioesterase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5379_Mixed,_incl._YqgF/RNase_H-like_domain,_and_Thioesterase_domain


id: CL:5393
description: Mostly uncharacterized, incl. Acetyltransferase (GNAT) family, and Dimeric alpha-beta barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5393_Mostly_uncharacterized,_incl._Acetyltransferase_(GNAT)_family,_and_Dimeric_alpha-beta_barrel


id: CL:5395
description: Mixed, incl. Acetyltransferase (GNAT) family, and Protein kinase-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5395_Mixed,_incl._Acetyltransferase_(GNAT)_family,_and_Protein_kinase-like_domain_superfamily


id: CL:5396
description: Mixed, incl. Acetyltransferase (GNAT) family, and Beta-eliminating lyase
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5396_Mixed,_incl._Acetyltransferase_(GNAT)_family,_and_Beta-eliminating_lyase


id: CL:5397
description: Mixed, incl. Acetyltransferase (GNAT) family, and Cupin 2, conserved barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5397_Mixed,_incl._Acetyltransferase_(GNAT)_family,_and_Cupin_2,_conserved_barrel


id: CL:5398
description: Mixed, incl. Cupin 2, conserved barrel, and Streptomycin biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5398_Mixed,_incl._Cupin_2,_conserved_barrel,_and_Streptomycin_biosynthesis


id: CL:5407
description: Mixed, incl. Acetyltransferase (GNAT) domain, and Acetyltransferase (GNAT) family
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5407_Mixed,_incl._Acetyltransferase_(GNAT)_domain,_and_Acetyltransferase_(GNAT)_family


id: CL:5416
description: Mixed, incl. Beta-eliminating lyase, and Phosphotransferase enzyme family
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5416_Mixed,_incl._Beta-eliminating_lyase,_and_Phosphotransferase_enzyme_family


id: CL:5427
description: Mixed, incl. FTP domain, and Hydrolase activity, acting on ether bonds
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5427_Mixed,_incl._FTP_domain,_and_Hydrolase_activity,_acting_on_ether_bonds


id: CL:5451
description: Outer membrane protein beta-barrel domain, and Immunoglobulin-like fold
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5451_Outer_membrane_protein_beta-barrel_domain,_and_Immunoglobulin-like_fold


id: CL:5465
description: Mostly uncharacterized, incl. Vancomycin resistance, and Dioxygenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5465_Mostly_uncharacterized,_incl._Vancomycin_resistance,_and_Dioxygenase_activity


id: CL:5466
description: Mostly uncharacterized, incl. Vancomycin resistance, and Dioxygenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5466_Mostly_uncharacterized,_incl._Vancomycin_resistance,_and_Dioxygenase_activity


id: CL:5467
description: Mostly uncharacterized, incl. Regulation of signaling, and FtsJ-like methyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5467_Mostly_uncharacterized,_incl._Regulation_of_signaling,_and_FtsJ-like_methyltransferase


id: CL:5468
description: Mostly uncharacterized, incl. Regulation of signaling, and FtsJ-like methyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5468_Mostly_uncharacterized,_incl._Regulation_of_signaling,_and_FtsJ-like_methyltransferase


id: CL:5470
description: Mixed, incl. Beta-lactamase enzyme family, and Aminoacyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5470_Mixed,_incl._Beta-lactamase_enzyme_family,_and_Aminoacyltransferase_activity


id: CL:5491
description: Mixed, incl. Post-translational protein modification, and DNA ligase (ATP) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5491_Mixed,_incl._Post-translational_protein_modification,_and_DNA_ligase_(ATP)_activity


id: CL:550
description: Mixed, incl. RNA degradation, and NUDIX hydrolase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:550_Mixed,_incl._RNA_degradation,_and_NUDIX_hydrolase_domain


id: CL:552
description: NUDIX hydrolase domain, and Exoribonuclease activity, producing 5-phosphomonoesters
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:552_NUDIX_hydrolase_domain,_and_Exoribonuclease_activity,_producing_5-phosphomonoesters


id: CL:5537
description: Mostly uncharacterized, incl. Cationic antimicrobial peptide (CAMP) resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5537_Mostly_uncharacterized,_incl._Cationic_antimicrobial_peptide_(CAMP)_resistance


id: CL:5555
description: Mixed, incl. Transposase activity, and Integrase, catalytic core
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5555_Mixed,_incl._Transposase_activity,_and_Integrase,_catalytic_core


id: CL:5557
description: Mixed, incl. Integrase, catalytic core, and Transposase IS3/IS911family
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5557_Mixed,_incl._Integrase,_catalytic_core,_and_Transposase_IS3/IS911family


id: CL:5558
description: Mixed, incl. HTH-like domain, and Fido domain
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5558_Mixed,_incl._HTH-like_domain,_and_Fido_domain


id: CL:5579
description: Integrase, catalytic core, and Transposase IS3/IS911family
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5579_Integrase,_catalytic_core,_and_Transposase_IS3/IS911family


id: CL:5600
description: Mixed, incl. MobA/MobL protein, and Conjugal transfer protein TraD
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:5600_Mixed,_incl._MobA/MobL_protein,_and_Conjugal_transfer_protein_TraD


id: CL:572
description: Mixed, incl. Poly A polymerase head domain, and 3-5-exoribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:572_Mixed,_incl._Poly_A_polymerase_head_domain,_and_3-5-exoribonuclease_activity


id: CL:583
description: Catalytic activity, acting on DNA, and DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:583_Catalytic_activity,_acting_on_DNA,_and_DNA_replication


id: CL:584
description: Catalytic activity, acting on DNA, and Single-stranded DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:584_Catalytic_activity,_acting_on_DNA,_and_Single-stranded_DNA_binding


id: CL:585
description: Catalytic activity, acting on DNA, and Single-stranded DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:585_Catalytic_activity,_acting_on_DNA,_and_Single-stranded_DNA_binding


id: CL:588
description: DNA repair, and DNA helicase, UvrD/REP type
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:588_DNA_repair,_and_DNA_helicase,_UvrD/REP_type


id: CL:590
description: Nucleotide excision repair, and DNA damage sensor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:590_Nucleotide_excision_repair,_and_DNA_damage_sensor_activity


id: CL:591
description: Mixed, incl. DNA damage sensor activity, and DNA helicase, UvrD/REP type
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:591_Mixed,_incl._DNA_damage_sensor_activity,_and_DNA_helicase,_UvrD/REP_type


id: CL:594
description: Mixed, incl. PIN-like domain superfamily, and Mechanosensitive ion channel
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:594_Mixed,_incl._PIN-like_domain_superfamily,_and_Mechanosensitive_ion_channel


id: CL:647
description: Primosome, and Single-stranded DNA-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:647_Primosome,_and_Single-stranded_DNA-binding_protein


id: CL:663
description: DNA topoisomerase, type IIA-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:663_DNA_topoisomerase,_type_IIA-like_domain_superfamily


id: CL:672
description: Mixed, incl. Horizontal gene transfer, and AI-2E family transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:672_Mixed,_incl._Horizontal_gene_transfer,_and_AI-2E_family_transporter


id: CL:696
description: Mixed, incl. Oxidoreductase activity, acting on a sulfur group of donors, and Chaperone
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:696_Mixed,_incl._Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_and_Chaperone


id: CL:697
description: Mixed, incl. Chaperone, and Oxidoreductase activity, acting on a sulfur group of donors
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:697_Mixed,_incl._Chaperone,_and_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: CL:698
description: Chaperone, and Oxidoreductase activity, acting on a sulfur group of donors
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:698_Chaperone,_and_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: CL:699
description: Chaperone, and Protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:699_Chaperone,_and_Protein_catabolic_process


id: CL:700
description: Chaperone, and Protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:700_Chaperone,_and_Protein_catabolic_process


id: CL:703
description: Chaperone, and Proteolysis involved in protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:703_Chaperone,_and_Proteolysis_involved_in_protein_catabolic_process


id: CL:706
description: Protein folding chaperone, and Chaperone binding
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:706_Protein_folding_chaperone,_and_Chaperone_binding


id: CL:745
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor, and Thioredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:745_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor,_and_Thioredoxin


id: CL:762
description: Reactive oxygen species metabolic process, and P-type ATPase, subfamily IB
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:762_Reactive_oxygen_species_metabolic_process,_and_P-type_ATPase,_subfamily_IB


id: CL:776
description: Mixed, incl. Glutaredoxin, and Type I phosphodiesterase / nucleotide pyrophosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:776_Mixed,_incl._Glutaredoxin,_and_Type_I_phosphodiesterase_/_nucleotide_pyrophosphatase


id: CL:786
description: Mixed, incl. Amino-acid biosynthesis, and Nucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:786_Mixed,_incl._Amino-acid_biosynthesis,_and_Nucleoside_monophosphate_metabolic_process


id: CL:787
description: Amino-acid biosynthesis, and Nucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:787_Amino-acid_biosynthesis,_and_Nucleoside_monophosphate_metabolic_process


id: CL:788
description: Amino-acid biosynthesis, and Ribonucleoside monophosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:788_Amino-acid_biosynthesis,_and_Ribonucleoside_monophosphate_biosynthetic_process


id: CL:789
description: Amino-acid biosynthesis, and Ribonucleoside monophosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:789_Amino-acid_biosynthesis,_and_Ribonucleoside_monophosphate_biosynthetic_process


id: CL:791
description: Ribonucleoside monophosphate biosynthetic process, and Diaminopimelate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:791_Ribonucleoside_monophosphate_biosynthetic_process,_and_Diaminopimelate_metabolic_process


id: CL:793
description: Ribonucleoside monophosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:793_Ribonucleoside_monophosphate_biosynthetic_process


id: CL:837
description: Diaminopimelate metabolic process, and Arginine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:837_Diaminopimelate_metabolic_process,_and_Arginine_biosynthesis


id: CL:871
description: Phenylalanine, tyrosine and tryptophan biosynthesis, and Histidine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:871_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis,_and_Histidine_biosynthesis


id: CL:926
description: Mixed, incl. Sulfur amino acid metabolic process, and Adenylyltransferase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:926_Mixed,_incl._Sulfur_amino_acid_metabolic_process,_and_Adenylyltransferase_complex


id: CL:928
description: Sulfur amino acid metabolic process, and S-adenosylmethionine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:928_Sulfur_amino_acid_metabolic_process,_and_S-adenosylmethionine_metabolic_process


id: CL:953
description: Mixed, incl. Deoxyribonucleotide biosynthetic process, and Purine nucleotide salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:953_Mixed,_incl._Deoxyribonucleotide_biosynthetic_process,_and_Purine_nucleotide_salvage


id: CL:954
description: Mixed, incl. Deoxyribonucleoside monophosphate metabolic process, and Purine nucleotide salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:954_Mixed,_incl._Deoxyribonucleoside_monophosphate_metabolic_process,_and_Purine_nucleotide_salvage


id: CL:956
description: Deoxyribonucleoside monophosphate metabolic process, and Flavoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:956_Deoxyribonucleoside_monophosphate_metabolic_process,_and_Flavoprotein


id: CL:966
description: Purine nucleotide salvage, and Ribonucleoside-diphosphate reductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:966_Purine_nucleotide_salvage,_and_Ribonucleoside-diphosphate_reductase_activity


id: CL:975
description: Mixed, incl. PilZ domain, and dTTP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:975_Mixed,_incl._PilZ_domain,_and_dTTP_biosynthetic_process


id: CL:985
description: Vitamin biosynthetic process, and Tetrahydrofolate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:985_Vitamin_biosynthetic_process,_and_Tetrahydrofolate_biosynthetic_process


id: CL:987
description: Riboflavin metabolic process, and Tetrahydrofolate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:987_Riboflavin_metabolic_process,_and_Tetrahydrofolate_biosynthetic_process


id: CL:988
description: Tetrahydrofolate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_448_STRINGid_CL:988_Tetrahydrofolate_biosynthetic_process


id: GO:0000701
description: Purine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0000701
golevel: 7
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0000701_Purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 10
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0000820
description: Regulation of glutamine family amino acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0000820
golevel: 9
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0000820_Regulation_of_glutamine_family_amino_acid_metabolic_process


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003871
description: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003871
golevel: 6
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0003871_5-methyltetrahydropteroyltriglutamate-homocysteine_S-methyltransferase_activity


id: GO:0003882
description: CDP-diacylglycerol-serine O-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003882
golevel: 6
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0003882_CDP-diacylglycerol-serine_O-phosphatidyltransferase_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 6
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0004015
description: adenosylmethionine-8-amino-7-oxononanoate transaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004015
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0004015_adenosylmethionine-8-amino-7-oxononanoate_transaminase_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004316
description: 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004316
golevel: 6
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0004316_3-oxoacyl-[acyl-carrier-protein]_reductase_(NADPH)_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
golevel: 6
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004365
description: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004365
golevel: 6
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0004365_glyceraldehyde-3-phosphate_dehydrogenase_(NAD+)_(phosphorylating)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004491
description: Methylmalonate-semialdehyde dehydrogenase (acylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004491
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0004491_Methylmalonate-semialdehyde_dehydrogenase_(acylating)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004591
description: Oxoglutarate dehydrogenase (succinyl-transferring) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004591
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0004591_Oxoglutarate_dehydrogenase_(succinyl-transferring)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004648
description: O-phospho-L-serine:2-oxoglutarate aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004648
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0004648_O-phospho-L-serine:2-oxoglutarate_aminotransferase_activity


id: GO:0004719
description: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004719
golevel: 8
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0004719_protein-L-isoaspartate_(D-aspartate)_O-methyltransferase_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0004808
description: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004808
golevel: 7
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0004808_tRNA_(5-methylaminomethyl-2-thiouridylate)-methyltransferase_activity


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 11
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0006616
description: SRP-dependent cotranslational protein targeting to membrane, translocation
memo: https://amigo.geneontology.org/amigo/term/GO:0006616
golevel: 12
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0006616_SRP-dependent_cotranslational_protein_targeting_to_membrane,_translocation


id: GO:0008271
description: Secondary active sulfate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008271
golevel: 6
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0008271_Secondary_active_sulfate_transmembrane_transporter_activity


id: GO:0008425
description: 2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008425
golevel: 7
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0008425_2-polyprenyl-6-methoxy-1,4-benzoquinone_methyltransferase_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 7
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008657
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008657
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0008657_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_inhibitor_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008666
description: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008666
golevel: 7
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0008666_2,3,4,5-tetrahydropyridine-2,6-dicarboxylate_N-succinyltransferase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
golevel: 6
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008713
description: ADP-heptose-lipopolysaccharide heptosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008713
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0008713_ADP-heptose-lipopolysaccharide_heptosyltransferase_activity


id: GO:0008759
description: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008759
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0008759_UDP-3-O-[3-hydroxymyristoyl]_N-acetylglucosamine_deacetylase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008780
description: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008780
golevel: 6
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0008780_acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine_O-acyltransferase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0008982
description: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008982
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0008982_protein-N(PI)-phosphohistidine-sugar_phosphotransferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 6
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 9
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 10
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 9
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 10
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009196
description: Pyrimidine deoxyribonucleoside diphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009196
golevel: 9
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0009196_Pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process


id: GO:0009197
description: Pyrimidine deoxyribonucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009197
golevel: 10
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0009197_Pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 10
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 9
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 10
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 10
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009330
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009330
golevel: 3
name:
  GOCC.STRING_v12.0_448_STRINGid_GO:0009330_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_complex


id: GO:0009401
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system
memo: https://amigo.geneontology.org/amigo/term/GO:0009401
golevel: 8
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0009401_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 6
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010142
description: Farnesyl diphosphate biosynthetic process, mevalonate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0010142
golevel: 9
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0010142_Farnesyl_diphosphate_biosynthetic_process,_mevalonate_pathway


id: GO:0010420
description: 3,4-dihydroxy-5-polyprenylbenzoic acid O-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0010420
golevel: 6
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0010420_3,4-dihydroxy-5-polyprenylbenzoic_acid_O-methyltransferase_activity


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
golevel: 3
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015658
description: Branched-chain amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015658
golevel: 6
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0015658_Branched-chain_amino_acid_transmembrane_transporter_activity


id: GO:0015932
description: Nucleobase-containing compound transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015932
golevel: 3
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0015932_Nucleobase-containing_compound_transmembrane_transporter_activity


id: GO:0015988
description: Energy coupled proton transmembrane transport, against electrochemical gradient
memo: https://amigo.geneontology.org/amigo/term/GO:0015988
golevel: 8
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0015988_Energy_coupled_proton_transmembrane_transport,_against_electrochemical_gradient


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016624
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016624
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016624_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_disulfide_as_acceptor


id: GO:0016625
memo: https://amigo.geneontology.org/amigo/term/GO:0016625
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016625_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_iron-sulfur_protein_as_acceptor

description:
  Oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016641
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016641
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016641_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_oxygen_as_acceptor


id: GO:0016642
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016642
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016642_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_disulfide_as_acceptor


id: GO:0016643
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016643
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016643_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_iron-sulfur_protein_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016649
memo: https://amigo.geneontology.org/amigo/term/GO:0016649
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016649_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor


id: GO:0016652
description: Oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016652
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016652_Oxidoreductase_activity,_acting_on_NAD(P)H,_NAD(P)_as_acceptor


id: GO:0016653
description: Oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016653
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016653_Oxidoreductase_activity,_acting_on_NAD(P)H,_heme_protein_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016657
description: Oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016657
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016657_Oxidoreductase_activity,_acting_on_NAD(P)H,_nitrogenous_group_as_acceptor


id: GO:0016661
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016661
golevel: 3
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016661_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016671
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016671
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016671_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: GO:0016679
description: Oxidoreductase activity, acting on diphenols and related substances as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016679
golevel: 3
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016679_Oxidoreductase_activity,_acting_on_diphenols_and_related_substances_as_donors


id: GO:0016682
description: Oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016682
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016682_Oxidoreductase_activity,_acting_on_diphenols_and_related_substances_as_donors,_oxygen_as_acceptor


id: GO:0016701
description: Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
memo: https://amigo.geneontology.org/amigo/term/GO:0016701
golevel: 3
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016701_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen


id: GO:0016702
memo: https://amigo.geneontology.org/amigo/term/GO:0016702
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016702_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_two_atoms_of_oxygen

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen


id: GO:0016705
memo: https://amigo.geneontology.org/amigo/term/GO:0016705
golevel: 3
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016705_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: GO:0016709
memo: https://amigo.geneontology.org/amigo/term/GO:0016709
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016709_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen


id: GO:0016713
memo: https://amigo.geneontology.org/amigo/term/GO:0016713
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016713_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_reduced_iron-sulfur_protein_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen


id: GO:0016714
memo: https://amigo.geneontology.org/amigo/term/GO:0016714
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016714_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_reduced_pteridine_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen


id: GO:0016716
memo: https://amigo.geneontology.org/amigo/term/GO:0016716
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016716_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_another_compound_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen


id: GO:0016717
memo: https://amigo.geneontology.org/amigo/term/GO:0016717
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016717_Oxidoreductase_activity,_acting_on_paired_donors,_with_oxidation_of_a_pair_of_donors_resulting_in_the_reduction_of_molecular_oxygen_to_two_molecules_of_water

description:
  Oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water


id: GO:0016721
description: Oxidoreductase activity, acting on superoxide radicals as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016721
golevel: 3
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016721_Oxidoreductase_activity,_acting_on_superoxide_radicals_as_acceptor


id: GO:0016724
description: Oxidoreductase activity, acting on metal ions, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016724
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016724_Oxidoreductase_activity,_acting_on_metal_ions,_oxygen_as_acceptor


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016730
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016730
golevel: 3
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016730_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors


id: GO:0016731
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016731
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016731_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_NAD_or_NADP_as_acceptor


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
golevel: 6
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016823
description: Hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances
memo: https://amigo.geneontology.org/amigo/term/GO:0016823
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016823_Hydrolase_activity,_acting_on_acid_carbon-carbon_bonds,_in_ketonic_substances


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016856
description: Racemase and epimerase activity, acting on hydroxy acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016856
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016856_Racemase_and_epimerase_activity,_acting_on_hydroxy_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016863
description: Intramolecular oxidoreductase activity, transposing C=C bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016863
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016863_Intramolecular_oxidoreductase_activity,_transposing_C=C_bonds


id: GO:0016869
description: Intramolecular transferase activity, transferring amino groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016869
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016869_Intramolecular_transferase_activity,_transferring_amino_groups


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016888
description: Endodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016888
golevel: 7
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016888_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016889
description: Endodeoxyribonuclease activity, producing 3-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016889
golevel: 7
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016889_Endodeoxyribonuclease_activity,_producing_3-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
golevel: 6
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016894
memo: https://amigo.geneontology.org/amigo/term/GO:0016894
golevel: 6
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016894_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_3-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3-phosphomonoesters


id: GO:0016895
description: Exodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016895
golevel: 7
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016895_Exodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016901
memo: https://amigo.geneontology.org/amigo/term/GO:0016901
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016901_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor


id: GO:0016903
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016903
golevel: 3
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0016903_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors


id: GO:0018339
description: peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid
memo: https://amigo.geneontology.org/amigo/term/GO:0018339
golevel: 8
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0018339_peptidyl-L-beta-methylthioaspartic_acid_biosynthetic_process_from_peptidyl-aspartic_acid


id: GO:0018478
description: Malonate-semialdehyde dehydrogenase (acetylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0018478
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0018478_Malonate-semialdehyde_dehydrogenase_(acetylating)_activity


id: GO:0019219
description: Regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019219
golevel: 5
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0019219_Regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0019243
description: Methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
memo: https://amigo.geneontology.org/amigo/term/GO:0019243
golevel: 9
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0019243_Methylglyoxal_catabolic_process_to_D-lactate_via_S-lactoyl-glutathione


id: GO:0019287
description: Isopentenyl diphosphate biosynthetic process, mevalonate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0019287
golevel: 12
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0019287_Isopentenyl_diphosphate_biosynthetic_process,_mevalonate_pathway


id: GO:0019293
description: Tyrosine biosynthetic process, by oxidation of phenylalanine
memo: https://amigo.geneontology.org/amigo/term/GO:0019293
golevel: 11
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0019293_Tyrosine_biosynthetic_process,_by_oxidation_of_phenylalanine


id: GO:0019294
description: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019294
golevel: 8
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0019294_keto-3-deoxy-D-manno-octulosonic_acid_biosynthetic_process


id: GO:0030613
description: Oxidoreductase activity, acting on phosphorus or arsenic in donors
memo: https://amigo.geneontology.org/amigo/term/GO:0030613
golevel: 3
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0030613_Oxidoreductase_activity,_acting_on_phosphorus_or_arsenic_in_donors


id: GO:0030614
description: Oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0030614
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0030614_Oxidoreductase_activity,_acting_on_phosphorus_or_arsenic_in_donors,_disulfide_as_acceptor


id: GO:0031235
description: Intrinsic component of the cytoplasmic side of the plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031235
name:
  GOCC.STRING_v12.0_448_STRINGid_GO:0031235_Intrinsic_component_of_the_cytoplasmic_side_of_the_plasma_membrane


id: GO:0031246
description: Intrinsic component of periplasmic side of cell outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031246
name:
  GOCC.STRING_v12.0_448_STRINGid_GO:0031246_Intrinsic_component_of_periplasmic_side_of_cell_outer_membrane


id: GO:0032297
description: Negative regulation of DNA-templated DNA replication initiation
memo: https://amigo.geneontology.org/amigo/term/GO:0032297
golevel: 11
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0032297_Negative_regulation_of_DNA-templated_DNA_replication_initiation


id: GO:0032414
description: Positive regulation of ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0032414
golevel: 8
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0032414_Positive_regulation_of_ion_transmembrane_transporter_activity


id: GO:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
golevel: 3
name:
  GOCC.STRING_v12.0_448_STRINGid_GO:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GO:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
golevel: 3
name:
  GOCC.STRING_v12.0_448_STRINGid_GO:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GO:0033283
description: ATPase-coupled organic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033283
golevel: 6
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0033283_ATPase-coupled_organic_acid_transmembrane_transporter_activity


id: GO:0033284
description: ATPase-coupled carboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033284
golevel: 7
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0033284_ATPase-coupled_carboxylic_acid_transmembrane_transporter_activity


id: GO:0033467
description: CMP-keto-3-deoxy-D-manno-octulosonic acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033467
golevel: 7
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0033467_CMP-keto-3-deoxy-D-manno-octulosonic_acid_metabolic_process


id: GO:0033468
description: CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033468
golevel: 8
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0033468_CMP-keto-3-deoxy-D-manno-octulosonic_acid_biosynthetic_process


id: GO:0033744
description: L-methionine:thioredoxin-disulfide S-oxidoreductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033744
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0033744_L-methionine:thioredoxin-disulfide_S-oxidoreductase_activity


id: GO:0035592
description: Establishment of protein localization to extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0035592
golevel: 6
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0035592_Establishment_of_protein_localization_to_extracellular_region


id: GO:0036107
description: 4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0036107
golevel: 7
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0036107_4-amino-4-deoxy-alpha-L-arabinopyranosyl_undecaprenyl_phosphate_metabolic_process


id: GO:0036108
description: 4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0036108
golevel: 8
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0036108_4-amino-4-deoxy-alpha-L-arabinopyranosyl_undecaprenyl_phosphate_biosynthetic_process


id: GO:0042083
description: 5,10-methylenetetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042083
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0042083_5,10-methylenetetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042085
description: 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042085
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0042085_5-methyltetrahydropteroyltri-L-glutamate-dependent_methyltransferase_activity


id: GO:0042173
description: Regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042173
golevel: 6
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0042173_Regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0043333
description: 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043333
golevel: 8
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0043333_2-octaprenyl-6-methoxy-1,4-benzoquinone_methylase_activity


id: GO:0043433
description: Negative regulation of DNA-binding transcription factor activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043433
golevel: 12
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0043433_Negative_regulation_of_DNA-binding_transcription_factor_activity


id: GO:0043467
description: Regulation of generation of precursor metabolites and energy
memo: https://amigo.geneontology.org/amigo/term/GO:0043467
golevel: 5
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0043467_Regulation_of_generation_of_precursor_metabolites_and_energy


id: GO:0043709
description: Cell adhesion involved in single-species biofilm formation
memo: https://amigo.geneontology.org/amigo/term/GO:0043709
golevel: 7
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0043709_Cell_adhesion_involved_in_single-species_biofilm_formation


id: GO:0043772
description: Acyl-phosphate glycerol-3-phosphate acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043772
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0043772_Acyl-phosphate_glycerol-3-phosphate_acyltransferase_activity


id: GO:0043811
description: Phosphate:acyl-[acyl carrier protein] acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043811
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0043811_Phosphate:acyl-[acyl_carrier_protein]_acyltransferase_activity


id: GO:0043891
description: glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043891
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0043891_glyceraldehyde-3-phosphate_dehydrogenase_(NAD(P)+)_(phosphorylating)_activity


id: GO:0044419
description: Biological process involved in interspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0044419
golevel: 1
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0044419_Biological_process_involved_in_interspecies_interaction_between_organisms


id: GO:0044769
description: ATPase activity, coupled to transmembrane movement of ions, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0044769
golevel: 7
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0044769_ATPase_activity,_coupled_to_transmembrane_movement_of_ions,_rotational_mechanism


id: GO:0045261
description: Proton-transporting ATP synthase complex, catalytic core F(1)
memo: https://amigo.geneontology.org/amigo/term/GO:0045261
golevel: 6
name:
  GOCC.STRING_v12.0_448_STRINGid_GO:0045261_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: GO:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
golevel: 6
name:
  GOCC.STRING_v12.0_448_STRINGid_GO:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GO:0045881
description: Positive regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0045881
golevel: 7
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0045881_Positive_regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0045934
description: Negative regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045934
golevel: 6
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0045934_Negative_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0045935
description: Positive regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045935
golevel: 6
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0045935_Positive_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0046537
description: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046537
golevel: 6
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0046537_2,3-bisphosphoglycerate-independent_phosphoglycerate_mutase_activity


id: GO:0046857
memo: https://amigo.geneontology.org/amigo/term/GO:0046857
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0046857_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors,_with_NAD_or_NADP_as_acceptor

description:
  Oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor


id: GO:0046912
description: Acyltransferase activity, acyl groups converted into alkyl on transfer
memo: https://amigo.geneontology.org/amigo/term/GO:0046912
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0046912_Acyltransferase_activity,_acyl_groups_converted_into_alkyl_on_transfer


id: GO:0046933
description: Proton-transporting ATP synthase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046933
golevel: 8
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0046933_Proton-transporting_ATP_synthase_activity,_rotational_mechanism


id: GO:0047451
description: 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047451
golevel: 6
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0047451_3-hydroxyoctanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0047480
description: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047480
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0047480_UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine_ligase_activity


id: GO:0050511
description: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050511
golevel: 6
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0050511_Undecaprenyldiphospho-muramoylpentapeptide_beta-N-acetylglucosaminyltransferase_activity


id: GO:0050566
description: asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050566
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0050566_asparaginyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0051003
description: Ligase activity, forming nitrogen-metal bonds, forming coordination complexes
memo: https://amigo.geneontology.org/amigo/term/GO:0051003
golevel: 4
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0051003_Ligase_activity,_forming_nitrogen-metal_bonds,_forming_coordination_complexes


id: GO:0051075
description: S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051075
golevel: 3
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0051075_S-adenosylmethionine:tRNA_ribosyltransferase-isomerase_activity


id: GO:0051172
description: Negative regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051172
golevel: 5
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0051172_Negative_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051173
description: Positive regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051173
golevel: 5
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0051173_Positive_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051703
description: Biological process involved in intraspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0051703
golevel: 1
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0051703_Biological_process_involved_in_intraspecies_interaction_between_organisms


id: GO:0051712
description: Positive regulation of killing of cells of another organism
memo: https://amigo.geneontology.org/amigo/term/GO:0051712
golevel: 7
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0051712_Positive_regulation_of_killing_of_cells_of_another_organism


id: GO:0051748
description: UTP-monosaccharide-1-phosphate uridylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051748
golevel: 6
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0051748_UTP-monosaccharide-1-phosphate_uridylyltransferase_activity


id: GO:0051991
memo: https://amigo.geneontology.org/amigo/term/GO:0051991
golevel: 6
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0051991_UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol_4-beta-N-acetylglucosaminlytransferase_activity

description:
  UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity


id: GO:0051992
memo: https://amigo.geneontology.org/amigo/term/GO:0051992
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0051992_UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate_transferase_activity

description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity


id: GO:0052042
description: Positive regulation by symbiont of host programmed cell death
memo: https://amigo.geneontology.org/amigo/term/GO:0052042
golevel: 8
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0052042_Positive_regulation_by_symbiont_of_host_programmed_cell_death


id: GO:0052590
description: sn-glycerol-3-phosphate:ubiquinone oxidoreductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052590
golevel: 6
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0052590_sn-glycerol-3-phosphate:ubiquinone_oxidoreductase_activity


id: GO:0052591
description: sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052591
golevel: 7
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0052591_sn-glycerol-3-phosphate:ubiquinone-8_oxidoreductase_activity


id: GO:0052908
description: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052908
golevel: 9
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0052908_16S_rRNA_(adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase_activity


id: GO:0055052
description: ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing
memo: https://amigo.geneontology.org/amigo/term/GO:0055052
golevel: 7
name:
  GOCC.STRING_v12.0_448_STRINGid_GO:0055052_ATP-binding_cassette_(ABC)_transporter_complex,_substrate-binding_subunit-containing


id: GO:0061695
description: Transferase complex, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0061695
golevel: 4
name:
  GOCC.STRING_v12.0_448_STRINGid_GO:0061695_Transferase_complex,_transferring_phosphorus-containing_groups


id: GO:0061928
description: Glutathione specific gamma-glutamylcyclotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0061928
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0061928_Glutathione_specific_gamma-glutamylcyclotransferase_activity


id: GO:0070626
memo: https://amigo.geneontology.org/amigo/term/GO:0070626
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0070626_(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)_succinate_lyase_(fumarate-forming)_activity

description:
  (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity


id: GO:0070647
description: Protein modification by small protein conjugation or removal
memo: https://amigo.geneontology.org/amigo/term/GO:0070647
golevel: 6
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0070647_Protein_modification_by_small_protein_conjugation_or_removal


id: GO:0072586
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) regulator activity
memo: https://amigo.geneontology.org/amigo/term/GO:0072586
golevel: 3
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0072586_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_regulator_activity


id: GO:0072599
description: Establishment of protein localization to endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0072599
golevel: 7
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0072599_Establishment_of_protein_localization_to_endoplasmic_reticulum


id: GO:0097588
description: Archaeal or bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:0097588
golevel: 4
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0097588_Archaeal_or_bacterial-type_flagellum-dependent_cell_motility


id: GO:0102027
description: S-adenosylmethionine:2-demethylquinol-8 methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102027
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0102027_S-adenosylmethionine:2-demethylquinol-8_methyltransferase_activity


id: GO:0102094
description: S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102094
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0102094_S-adenosylmethionine:2-demethylmenaquinol_methyltransferase_activity


id: GO:0102552
description: Lipoyl synthase activity (acting on glycine-cleavage complex H protein
memo: https://amigo.geneontology.org/amigo/term/GO:0102552
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0102552_Lipoyl_synthase_activity_(acting_on_glycine-cleavage_complex_H_protein


id: GO:0102553
description: Lipoyl synthase activity (acting on pyruvate dehydrogenase E2 protein)
memo: https://amigo.geneontology.org/amigo/term/GO:0102553
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0102553_Lipoyl_synthase_activity_(acting_on_pyruvate_dehydrogenase_E2_protein)


id: GO:0102955
description: S-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102955
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0102955_S-adenosylmethionine:2-demethylmenaquinol-7_methyltransferase_activity


id: GO:0106074
description: aminoacyl-tRNA metabolism involved in translational fidelity
memo: https://amigo.geneontology.org/amigo/term/GO:0106074
golevel: 9
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:0106074_aminoacyl-tRNA_metabolism_involved_in_translational_fidelity


id: GO:0106418
description: UDP-N-acetylmuramate-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptanedioate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0106418
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0106418_UDP-N-acetylmuramate-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptanedioate_ligase_activity


id: GO:0140078
description: Class I DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0140078
golevel: 5
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:0140078_Class_I_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:1900377
description: Negative regulation of secondary metabolite biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:1900377
golevel: 6
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:1900377_Negative_regulation_of_secondary_metabolite_biosynthetic_process


id: GO:1901505
description: Carbohydrate derivative transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:1901505
golevel: 3
name:
  GOMF.STRING_v12.0_448_STRINGid_GO:1901505_Carbohydrate_derivative_transmembrane_transporter_activity


id: GO:1901800
description: Positive regulation of proteasomal protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1901800
golevel: 9
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:1901800_Positive_regulation_of_proteasomal_protein_catabolic_process


id: GO:1902021
description: Regulation of bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:1902021
golevel: 6
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:1902021_Regulation_of_bacterial-type_flagellum-dependent_cell_motility


id: GO:1902201
description: Negative regulation of bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:1902201
golevel: 7
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:1902201_Negative_regulation_of_bacterial-type_flagellum-dependent_cell_motility


id: GO:1902221
description: Erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1902221
golevel: 8
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:1902221_Erythrose_4-phosphate/phosphoenolpyruvate_family_amino_acid_metabolic_process


id: GO:1902222
description: Erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1902222
golevel: 9
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:1902222_Erythrose_4-phosphate/phosphoenolpyruvate_family_amino_acid_catabolic_process


id: GO:1903050
description: Regulation of proteolysis involved in protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1903050
golevel: 7
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:1903050_Regulation_of_proteolysis_involved_in_protein_catabolic_process


id: GO:1903052
description: Positive regulation of proteolysis involved in protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1903052
golevel: 8
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:1903052_Positive_regulation_of_proteolysis_involved_in_protein_catabolic_process


id: GO:1903507
description: Negative regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903507
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:1903507_Negative_regulation_of_nucleic_acid-templated_transcription


id: GO:1903508
description: Positive regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903508
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:1903508_Positive_regulation_of_nucleic_acid-templated_transcription


id: GO:1904950
description: Negative regulation of establishment of protein localization
memo: https://amigo.geneontology.org/amigo/term/GO:1904950
golevel: 7
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:1904950_Negative_regulation_of_establishment_of_protein_localization


id: GO:2000113
description: Negative regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000113
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:2000113_Negative_regulation_of_cellular_macromolecule_biosynthetic_process


id: GO:2000371
description: Regulation of DNA topoisomerase (ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:2000371
golevel: 5
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:2000371_Regulation_of_DNA_topoisomerase_(ATP-hydrolyzing)_activity


id: GO:2001061
description: D-glycero-D-manno-heptose 7-phosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2001061
golevel: 6
name:
  GOBP.STRING_v12.0_448_STRINGid_GO:2001061_D-glycero-D-manno-heptose_7-phosphate_biosynthetic_process


id: GOCC:0000015
description: Phosphopyruvate hydratase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000015
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_448_STRINGid_GOCC:0000015_Phosphopyruvate_hydratase_complex


