# geneInfo

ensembl_gene_id: Lspi_0002
symbol: ppnK
gene_biotype: protein_coding
description:
  Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: Lspi_0009
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: Lspi_0011
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: Lspi_0037
symbol: Lspi_0037
gene_biotype: protein_coding
description:
  Nitrogen regulation protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: Lspi_0041
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N' (replication factor Y); Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: Lspi_0046
symbol: rpiA
gene_biotype: protein_coding
description:
  Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.


ensembl_gene_id: Lspi_0056
symbol: hipB
gene_biotype: protein_coding
description:
  Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: Lspi_0064
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase, homodimeric type; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.


ensembl_gene_id: Lspi_0065
symbol: rnsT
gene_biotype: protein_coding
description:
  Ribonuclease T; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis.


ensembl_gene_id: Lspi_0068
symbol: Lspi_0068
gene_biotype: protein_coding
description:
  Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: Lspi_0069
symbol: argD
gene_biotype: protein_coding
description:
  Ornithine/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: Lspi_0075
symbol: vacB
gene_biotype: protein_coding
description:
  Exoribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: Lspi_0077
symbol: artJ
gene_biotype: protein_coding
description:
  Arginine 3rd transport system periplasmic binding protein; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: Lspi_0080
symbol: brnQ
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport system 2 carrier protein; Component of the transport system for branched-chain amino acids.


ensembl_gene_id: Lspi_0087
symbol: apaH
gene_biotype: protein_coding
description:
  Bis(5'-nucleosyl)-tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.


ensembl_gene_id: Lspi_0089
symbol: ksgA
gene_biotype: protein_coding
description:
  Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: Lspi_0090
symbol: tatC
gene_biotype: protein_coding
description:
  Sec-independent (periplasmic) protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: Lspi_0097
symbol: pldA
gene_biotype: protein_coding
description:
  Phospholipase A1 precursor; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family.


ensembl_gene_id: Lspi_0098
symbol: rho
gene_biotype: protein_coding
description:
  Hypothetical protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: Lspi_0100
symbol: rsmE
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: Lspi_0103
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: Lspi_0106
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: Lspi_0113
symbol: parC
gene_biotype: protein_coding
description:
  DNA topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.


ensembl_gene_id: Lspi_0117
symbol: atpC
gene_biotype: protein_coding
description:
  F1 sector of membrane-bound ATP synthase, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: Lspi_0118
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase F0F1 subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: Lspi_0119
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase F0F1 subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: Lspi_0120
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase F0F1 subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: Lspi_0121
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase F1 subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: Lspi_0122
symbol: atpF
gene_biotype: protein_coding
description:
  H+-transporting ATP synthase chain b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: Lspi_0123
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F0F1 subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: Lspi_0124
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0 subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: Lspi_0132
symbol: rsmI
gene_biotype: protein_coding
description:
  Tetrapyrrole (corrin/porphyrin) methylase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: Lspi_0150
symbol: ahpD
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: Lspi_0152
symbol: sodC
gene_biotype: protein_coding
description:
  Superoxide dismutase, Cu, Zn; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.


ensembl_gene_id: Lspi_0157
symbol: deaD
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.


ensembl_gene_id: Lspi_0163
symbol: djlA
gene_biotype: protein_coding
description:
  DNA binding protein DnaJ, heat shock protein; Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB/RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host.


ensembl_gene_id: Lspi_0164
symbol: Lspi_0164
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-oct-2-ulosonic acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: Lspi_0165
symbol: dksA
gene_biotype: protein_coding
description:
  DnaK suppressor protein; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression.


ensembl_gene_id: Lspi_0166
symbol: hemK
gene_biotype: protein_coding
description:
  Protein methyltransferase HemK; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: Lspi_0167
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: Lspi_0168
symbol: hemA
gene_biotype: protein_coding
description:
  Glutamyl tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: Lspi_0172
symbol: bioC_1
gene_biotype: protein_coding
description:
  Biotin synthase; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway.


ensembl_gene_id: Lspi_0176
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: Lspi_0186
symbol: murJ
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: Lspi_0189
symbol: pepA
gene_biotype: protein_coding
description:
  Aminopeptidase A/I; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: Lspi_0195
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: Lspi_0197
symbol: lolD
gene_biotype: protein_coding
description:
  ABC transporter ATP binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.


ensembl_gene_id: Lspi_0204
symbol: sufS
gene_biotype: protein_coding
description:
  Selenocysteine lyase, PLP-dependent; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.


ensembl_gene_id: Lspi_0223
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: Lspi_0231
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: Lspi_0234
symbol: xseA
gene_biotype: protein_coding
description:
  Exonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: Lspi_0241
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: Lspi_0246
symbol: Lspi_0246
gene_biotype: protein_coding
description:
  Hydrolase; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family.


ensembl_gene_id: Lspi_0254
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: Lspi_0257
symbol: truD
gene_biotype: protein_coding
description:
  Hydrogenase; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.


ensembl_gene_id: Lspi_0259
symbol: Lspi_0259
gene_biotype: protein_coding
description:
  Phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase; Belongs to the UbiA prenyltransferase family.


ensembl_gene_id: Lspi_0273
symbol: trmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: Lspi_0274
symbol: oxaA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: Lspi_0275
symbol: Lspi_0275
gene_biotype: protein_coding
description:
  Putative membrane protein insertion efficiency factor; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: Lspi_0276
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component (RNase P); RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: Lspi_0278
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosome replication initiator DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: Lspi_0279
symbol: dnaN
gene_biotype: protein_coding
description:
  DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...]


ensembl_gene_id: Lspi_0280
symbol: recF
gene_biotype: protein_coding
description:
  RecF recombinational DNA repair ATPase; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: Lspi_0281
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase, subunit B (type II topoisomerase); A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP [...]


ensembl_gene_id: Lspi_0284
symbol: hfq
gene_biotype: protein_coding
description:
  Bacteriophage Q beta replication host factor-I protein; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: Lspi_0285
symbol: hflX
gene_biotype: protein_coding
description:
  GTPase; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: Lspi_0291
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: Lspi_0293
symbol: crcB
gene_biotype: protein_coding
description:
  Hypothetical protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: Lspi_0294
symbol: lpxA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: Lspi_0295
symbol: fabZ
gene_biotype: protein_coding
description:
  (3R)-hydroxymyristoyl-ACP dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: Lspi_0298
symbol: bamA
gene_biotype: protein_coding
description:
  Outer membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: Lspi_0301
symbol: uppS
gene_biotype: protein_coding
description:
  Undecaprenyl pyrophosphate synthase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di- trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide.


ensembl_gene_id: Lspi_0310
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: Lspi_0315
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: Lspi_0318
symbol: rpoN
gene_biotype: protein_coding
description:
  RNA polymerase sigma-54 factor (sigma-L); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: Lspi_0322
symbol: pssA
gene_biotype: protein_coding
description:
  CDP-diacylglycerol-serine O-phosphatidyltransferase (phosphatidylserine synthase); Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: Lspi_0330
symbol: Lspi_0330
gene_biotype: protein_coding
description:
  Translation initiation protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: Lspi_0332
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: Lspi_0333
symbol: accB
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: Lspi_0334
symbol: Lspi_0334
gene_biotype: protein_coding
description:
  Acetyl CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: Lspi_0335
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: Lspi_0341
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.


ensembl_gene_id: Lspi_0343
symbol: hemN
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: Lspi_0344
symbol: plsY
gene_biotype: protein_coding
description:
  Transmembrane protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: Lspi_0345
symbol: gcp
gene_biotype: protein_coding
description:
  DNA-binding/iron metalloprotein/AP endonuclease; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: Lspi_0348
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: Lspi_0349
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase sigma 70 factor (RpoD); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: Lspi_0352
symbol: Lspi_0352
gene_biotype: protein_coding
description:
  Ferredoxin II (4Fe-4S); Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: Lspi_0356
symbol: kdsB
gene_biotype: protein_coding
description:
  3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: Lspi_0361
symbol: bolA
gene_biotype: protein_coding
description:
  Regulator of penicillin binding proteins and beta lactamase transcription (morphogene); Belongs to the BolA/IbaG family.


ensembl_gene_id: Lspi_0364
symbol: pfp
gene_biotype: protein_coding
description:
  PPi dependent phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.


ensembl_gene_id: Lspi_0366
symbol: gltX
gene_biotype: protein_coding
description:
  Glutamate tRNA synthetase catalytic subunit; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).


ensembl_gene_id: Lspi_0367
symbol: selO
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.


ensembl_gene_id: Lspi_0382
symbol: Lspi_0382
gene_biotype: protein_coding
description:
  Flagellar protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.


ensembl_gene_id: Lspi_0383
symbol: fliN
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.


ensembl_gene_id: Lspi_0385
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: Lspi_0386
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: Lspi_0387
symbol: fliR
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein fliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: Lspi_0388
symbol: flhB-2
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: Lspi_0389
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: Lspi_0392
symbol: fliA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis sigma factor FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.


ensembl_gene_id: Lspi_0396
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: Lspi_0404
symbol: Lspi_0404
gene_biotype: protein_coding
description:
  LysR family transporter transcriptional regulator; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: Lspi_0409
symbol: Lspi_0409
gene_biotype: protein_coding
description:
  General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.


ensembl_gene_id: Lspi_0411
symbol: lepA-2
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: Lspi_0414
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: Lspi_0416
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: Lspi_0419
symbol: yajC
gene_biotype: protein_coding
description:
  SecYEG protein translocase auxillary subunit; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.


ensembl_gene_id: Lspi_0420
symbol: secD
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: Lspi_0421
symbol: secF
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: Lspi_0423
symbol: hisC-2
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: Lspi_0461
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: Lspi_0464
symbol: recA
gene_biotype: protein_coding
description:
  Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: Lspi_0466
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: Lspi_0467
symbol: mscL
gene_biotype: protein_coding
description:
  Large conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: Lspi_0471
symbol: tpx
gene_biotype: protein_coding
description:
  Putative thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.


ensembl_gene_id: Lspi_0477
symbol: Lspi_0477
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.


ensembl_gene_id: Lspi_0478
symbol: rir1
gene_biotype: protein_coding
description:
  Ribonucleotide-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: Lspi_0481
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: Lspi_0482
symbol: aat
gene_biotype: protein_coding
description:
  leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: Lspi_0485
symbol: lolA
gene_biotype: protein_coding
description:
  Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: Lspi_0491
symbol: fliF
gene_biotype: protein_coding
description:
  Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: Lspi_0492
symbol: fliG
gene_biotype: protein_coding
description:
  Flagellar motor switch protein; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.


ensembl_gene_id: Lspi_0501
symbol: clpB
gene_biotype: protein_coding
description:
  Endopeptidase Clp ATP-binding subunit B; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: Lspi_0504
symbol: trmJ
gene_biotype: protein_coding
description:
  RNA methyltransferase; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.


ensembl_gene_id: Lspi_0509
symbol: coaX
gene_biotype: protein_coding
description:
  Bvg accessory factor; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: Lspi_0511
symbol: rsmH
gene_biotype: protein_coding
description:
  S-adenosylmethyl transferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: Lspi_0512
symbol: ftsL
gene_biotype: protein_coding
description:
  Cell division transmembrane protein FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: Lspi_0513
symbol: ftsI
gene_biotype: protein_coding
description:
  Peptidoglycan synthetase FtsI precursor; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily.


ensembl_gene_id: Lspi_0514
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: Lspi_0515
symbol: pdxB
gene_biotype: protein_coding
description:
  Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate.


ensembl_gene_id: Lspi_0525
symbol: Lspi_0525
gene_biotype: protein_coding
description:
  Electron transferring flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.


ensembl_gene_id: Lspi_0533
symbol: surE
gene_biotype: protein_coding
description:
  Stationary phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: Lspi_0536
symbol: rpoS
gene_biotype: protein_coding
description:
  Stationary phase specific sigma factor RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response.


ensembl_gene_id: Lspi_0539
symbol: ruvC
gene_biotype: protein_coding
description:
  Crossover junction endodeoxyribonuclease ruvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: Lspi_0540
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: Lspi_0543
symbol: Lspi_0543
gene_biotype: protein_coding
description:
  Intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.


ensembl_gene_id: Lspi_0546
symbol: gloB
gene_biotype: protein_coding
description:
  Hydroxyacylglutathione hydrolase (glyoxalase II); Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.


ensembl_gene_id: Lspi_0547
symbol: rlmJ
gene_biotype: protein_coding
description:
  Protein involved in catabolism of external DNA; Specifically methylates the adenine in position 2030 of 23S rRNA.


ensembl_gene_id: Lspi_0550
symbol: potD
gene_biotype: protein_coding
description:
  Spermidine/putrescine-binding periplasmic protein PotD; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.


ensembl_gene_id: Lspi_0553
symbol: potA-2
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter, ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.


ensembl_gene_id: Lspi_0558
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: Lspi_0573
symbol: ccmA
gene_biotype: protein_coding
description:
  Cytochrome c biogenesis protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.


ensembl_gene_id: Lspi_0574
symbol: ccmB
gene_biotype: protein_coding
description:
  Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family.


ensembl_gene_id: Lspi_0575
symbol: ccmC
gene_biotype: protein_coding
description:
  Heme exporter protein CcmC; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.


ensembl_gene_id: Lspi_0576
symbol: ccmD
gene_biotype: protein_coding
description:
  Heme exporter protein CcmD; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family.


ensembl_gene_id: Lspi_0577
symbol: ccmE
gene_biotype: protein_coding
description:
  Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.


ensembl_gene_id: Lspi_0592
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: Lspi_0599
symbol: Lspi_0599
gene_biotype: protein_coding
description:
  NAD+-dependent formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily.


ensembl_gene_id: Lspi_0611
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase II (FGAM synthase II); Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is [...]


ensembl_gene_id: Lspi_0613
symbol: purQ
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase I (FGAM synthase I); Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is t [...]


ensembl_gene_id: Lspi_0615
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: Lspi_0617
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: Lspi_0618
symbol: purK
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR); Belongs to the PurK/PurT family.


ensembl_gene_id: Lspi_0619
symbol: purE
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase, catalytic subunit PurE; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: Lspi_0626
symbol: cyoE
gene_biotype: protein_coding
description:
  Polyprenyltransferase (cytochrome oxidase assembly factor); Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.


ensembl_gene_id: Lspi_0632
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: Lspi_0635
symbol: yqgF
gene_biotype: protein_coding
description:
  Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: Lspi_0636
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: Lspi_0675
symbol: lvrC
gene_biotype: protein_coding
description:
  Pleiotropic regulatory protein for carbon source metabolism; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small [...]


ensembl_gene_id: Lspi_0703
symbol: tyrS
gene_biotype: protein_coding
description:
  Tyrosyl tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.


ensembl_gene_id: Lspi_0708
symbol: kup
gene_biotype: protein_coding
description:
  KUP system potassium uptake protein; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family.


ensembl_gene_id: Lspi_0726
symbol: queF
gene_biotype: protein_coding
description:
  GTP cyclohydrolase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).


ensembl_gene_id: Lspi_0729
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: Lspi_0730
symbol: hslV
gene_biotype: protein_coding
description:
  Detoxification / adaptation, Protein fate / hydrolases / secretion; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: Lspi_0732
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: Lspi_0748
symbol: queH
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).


ensembl_gene_id: Lspi_0749
symbol: orn
gene_biotype: protein_coding
description:
  Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family.


ensembl_gene_id: Lspi_0750
symbol: cca
gene_biotype: protein_coding
description:
  tRNA nucleotidyltransferase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases.


ensembl_gene_id: Lspi_0751
symbol: engC
gene_biotype: protein_coding
description:
  EngC GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: Lspi_0755
symbol: folA
gene_biotype: protein_coding
description:
  Dihydrofolate reductase FolA; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.


ensembl_gene_id: Lspi_0756
symbol: pdxA
gene_biotype: protein_coding
description:
  4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).


ensembl_gene_id: Lspi_0757
symbol: surA-2
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase D; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation.


ensembl_gene_id: Lspi_0758
symbol: lptD
gene_biotype: protein_coding
description:
  Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.


ensembl_gene_id: Lspi_0766
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: Lspi_0769
symbol: Lspi_0769
gene_biotype: protein_coding
description:
  Filamentation induced by cAMP protein Fic; Adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins.


ensembl_gene_id: Lspi_0776
symbol: mltA_1
gene_biotype: protein_coding
description:
  Membrane-bound lytic murein transglycosylase; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division.


ensembl_gene_id: Lspi_0781
symbol: Lspi_0781
gene_biotype: protein_coding
description:
  Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: Lspi_0783
symbol: Lspi_0783
gene_biotype: protein_coding
description:
  ProQ-like, activator of ProP osmoprotectant transporter; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family.


ensembl_gene_id: Lspi_0789
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: Lspi_0790
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: Lspi_0794
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: Lspi_0801
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: Lspi_0802
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: Lspi_0803
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: Lspi_0804
symbol: ftsQ
gene_biotype: protein_coding
description:
  Cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly.


ensembl_gene_id: Lspi_0805
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: Lspi_0808
symbol: ftsW
gene_biotype: protein_coding
description:
  Cell division protein ftsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily.


ensembl_gene_id: Lspi_0809
symbol: murD_1
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: Lspi_0810
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: Lspi_0811
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alani ne ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: Lspi_0813
symbol: zipA
gene_biotype: protein_coding
description:
  Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.


ensembl_gene_id: Lspi_0814
symbol: smc_1
gene_biotype: protein_coding
description:
  Chromosome partition protein smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: Lspi_0819
symbol: ubiX
gene_biotype: protein_coding
description:
  3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: Lspi_0828
symbol: mutM
gene_biotype: protein_coding
description:
  formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: Lspi_0831
symbol: coaD
gene_biotype: protein_coding
description:
  Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: Lspi_0832
symbol: lolB
gene_biotype: protein_coding
description:
  Molecular chaperone LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.


ensembl_gene_id: Lspi_0833
symbol: prs_1
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: Lspi_0834
symbol: fis_2
gene_biotype: protein_coding
description:
  Global DNA-binding transcriptional dual regulator; Belongs to the transcriptional regulatory Fis family.


ensembl_gene_id: Lspi_0839
symbol: pdxH
gene_biotype: protein_coding
description:
  Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).


ensembl_gene_id: Lspi_0847
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: Lspi_0848
symbol: sucC
gene_biotype: protein_coding
description:
  Succinyl CoA synthetase beta chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: Lspi_0849
symbol: sucB_1
gene_biotype: protein_coding
description:
  Dihydrolipoamide succinyltransferase subunit E2; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: Lspi_0852
symbol: sdhA_2
gene_biotype: protein_coding
description:
  Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.


ensembl_gene_id: Lspi_0853
symbol: sdhD
gene_biotype: protein_coding
description:
  Succinate dehydrogenase, hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH).


ensembl_gene_id: Lspi_0859
symbol: feoB
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: Lspi_0864
symbol: panB
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: Lspi_0865
symbol: panC
gene_biotype: protein_coding
description:
  Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: Lspi_0874
symbol: kefC_1
gene_biotype: protein_coding
description:
  Glutathione-regulated potassium efflux system; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: Lspi_0875
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: Lspi_0878
symbol: pnp
gene_biotype: protein_coding
description:
  Polynucleotide phosphorylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: Lspi_0879
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: Lspi_0880
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: Lspi_0881
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: Lspi_0882
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: Lspi_0883
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription elongation protein nusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: Lspi_0884
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: Lspi_0885
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH dehydrogenase I subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: Lspi_0888
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase chain K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: Lspi_0889
symbol: nuoJ
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase chain J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: Lspi_0890
symbol: nuoI
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: Lspi_0891
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase chain H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: Lspi_0892
symbol: nuoG
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.


ensembl_gene_id: Lspi_0893
symbol: Lspi_0893
gene_biotype: protein_coding
description:
  NADH dehydrogenase I subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.


ensembl_gene_id: Lspi_0895
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH dehydrogenase I subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: Lspi_0896
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH dehydrogenase I chain C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: Lspi_0897
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: Lspi_0898
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH dehydrogenase I chain A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: Lspi_0899
symbol: secG
gene_biotype: protein_coding
description:
  Protein-export membrane protein secG (preprotein translocase subunit); Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: Lspi_0900
symbol: tpi
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: Lspi_0902
symbol: msrA_1
gene_biotype: protein_coding
description:
  Phosphoglucomutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: Lspi_0903
symbol: folP
gene_biotype: protein_coding
description:
  7,8-dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: Lspi_0904
symbol: ftsH
gene_biotype: protein_coding
description:
  Cell division protease ftsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: Lspi_0905
symbol: rlmE
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase J; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.


ensembl_gene_id: Lspi_0910
symbol: Lspi_0910
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: Lspi_0917
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: Lspi_0925
symbol: rep
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase Rep; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction.


ensembl_gene_id: Lspi_0926
symbol: Lspi_0926
gene_biotype: protein_coding
description:
  Heat shock protein 33, redox regulated chaperonin; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress; Belongs to the HSP33 family.


ensembl_gene_id: Lspi_0934
symbol: ubiG
gene_biotype: protein_coding
description:
  3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.


ensembl_gene_id: Lspi_0939
symbol: astD
gene_biotype: protein_coding
description:
  Succinylglutamic-5-semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.


ensembl_gene_id: Lspi_0940
symbol: astB
gene_biotype: protein_coding
description:
  Succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2).


ensembl_gene_id: Lspi_0946
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: Lspi_0948
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts (EF-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: Lspi_0951
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: Lspi_0952
symbol: glnD
gene_biotype: protein_coding
description:
  protein-PII uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.


ensembl_gene_id: Lspi_0953
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: Lspi_0955
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: Lspi_0956
symbol: panD
gene_biotype: protein_coding
description:
  Aspartate alpha-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: Lspi_0958
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: Lspi_0965
symbol: ugpE
gene_biotype: protein_coding
description:
  Sn-glycerol-3-phosphate transmembrane ABC transporter; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.


ensembl_gene_id: Lspi_0969
symbol: gatC
gene_biotype: protein_coding
description:
  glutamyl/tRNA (Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: Lspi_0970
symbol: gatA
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: Lspi_0971
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: Lspi_0974
symbol: flgA
gene_biotype: protein_coding
description:
  Flagellar basal body P-ring biosynthesis protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.


ensembl_gene_id: Lspi_0982
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase HisG; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily.


ensembl_gene_id: Lspi_0983
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: Lspi_0984
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase (imidazole acetol-phosphate transaminase); Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: Lspi_0985
symbol: hisB
gene_biotype: protein_coding
description:
  Imidazole glycerol-phosphate dehydratase/histidinol phosphatase; In the N-terminal section; belongs to the histidinol- phosphatase family.


ensembl_gene_id: Lspi_0986
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: Lspi_0988
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: Lspi_0989
symbol: hisIE
gene_biotype: protein_coding
description:
  Histidine biosynthesis bifunctional protein HisIE; In the N-terminal section; belongs to the PRA-CH family.


ensembl_gene_id: Lspi_0994
symbol: bamD
gene_biotype: protein_coding
description:
  Competence lipoprotein ComL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: Lspi_1000
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: Lspi_1001
symbol: ribH
gene_biotype: protein_coding
description:
  Riboflavin synthase beta chain (6,7-dimethyl-8-ribityllumazine synthase); Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family.


ensembl_gene_id: Lspi_1002
symbol: ribA
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: Lspi_1004
symbol: ribD
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: Lspi_1031
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxal phosphate biosynthetic protein PdxJ; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: Lspi_1033
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: Lspi_1035
symbol: putP
gene_biotype: protein_coding
description:
  Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: Lspi_1039
symbol: lspA
gene_biotype: protein_coding
description:
  Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: Lspi_1040
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: Lspi_1041
symbol: ribF
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibF (riboflavin kinase/FMN adenylyltransferase); Belongs to the ribF family.


ensembl_gene_id: Lspi_1046
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: Lspi_1047
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase I; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: Lspi_1156
symbol: hemD
gene_biotype: protein_coding
description:
  uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: Lspi_1157
symbol: hemC
gene_biotype: protein_coding
description:
  Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: Lspi_1161
symbol: dsbB
gene_biotype: protein_coding
description:
  Disulfide bond formation protein DsbB; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family.


ensembl_gene_id: Lspi_1162
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: Lspi_1163
symbol: ppiB
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase B; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: Lspi_1170
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: Lspi_1171
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: Lspi_1173
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: Lspi_1174
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: Lspi_1175
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: Lspi_1176
symbol: himA
gene_biotype: protein_coding
description:
  Integration host factor subunit Alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: Lspi_1178
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: Lspi_1180
symbol: petA
gene_biotype: protein_coding
description:
  Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: Lspi_1181
symbol: petB
gene_biotype: protein_coding
description:
  Ubiquinol-cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: Lspi_1185
symbol: yjeF
gene_biotype: protein_coding
description:
  Carbohydrate kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...]


ensembl_gene_id: Lspi_1188
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: Lspi_1189
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: Lspi_1199
symbol: Lspi_1199
gene_biotype: protein_coding
description:
  Putative methylase; Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle; Belongs to the methyltransferase superfamily. RsmD family.


ensembl_gene_id: Lspi_1202
symbol: ftsY
gene_biotype: protein_coding
description:
  Cell division membrane protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.


ensembl_gene_id: Lspi_1203
symbol: ftsE
gene_biotype: protein_coding
description:
  Cell division ATP transporter FtsE; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: Lspi_1204
symbol: ftsX
gene_biotype: protein_coding
description:
  Cell division ATP transporter FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: Lspi_1205
symbol: rpoH
gene_biotype: protein_coding
description:
  RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.


ensembl_gene_id: Lspi_1212
symbol: eno
gene_biotype: protein_coding
description:
  Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.


ensembl_gene_id: Lspi_1213
symbol: ftsB
gene_biotype: protein_coding
description:
  Septum formation initiator; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: Lspi_1216
symbol: queE
gene_biotype: protein_coding
description:
  Radical activating enzyme; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: Lspi_1217
symbol: cpoB
gene_biotype: protein_coding
description:
  Outer membrane protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.


ensembl_gene_id: Lspi_1218
symbol: pal
gene_biotype: protein_coding
description:
  Peptidoglycan-associated lipoprotein precursor (19 kDa surface antigen) (PPL); Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: Lspi_1223
symbol: dctA
gene_biotype: protein_coding
description:
  C4-dicarboxylic acid, orotate and citrate transporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: Lspi_1226
symbol: fni
gene_biotype: protein_coding
description:
  Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).


ensembl_gene_id: Lspi_1238
symbol: csrA_1
gene_biotype: protein_coding
description:
  Carbon storage regulator; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s).


ensembl_gene_id: Lspi_1262
symbol: ack
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: Lspi_1266
symbol: Lspi_1266
gene_biotype: protein_coding
description:
  Chemiosmotic efflux system protein A-like protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: Lspi_1267
symbol: cecB
gene_biotype: protein_coding
description:
  Chemiosmotic efflux system C protein B; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Lspi_1277
symbol: Lspi_1277
gene_biotype: protein_coding
description:
  Chemiosmotic efflux system B protein A; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: Lspi_1278
symbol: cebB
gene_biotype: protein_coding
description:
  Chemiosmotic efflux system B protein B; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Lspi_1292
symbol: yedK
gene_biotype: protein_coding
description:
  Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family.


ensembl_gene_id: Lspi_1314
symbol: grxC_1
gene_biotype: protein_coding
description:
  Glutaredoxin; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.


ensembl_gene_id: Lspi_1315
symbol: secB
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.


ensembl_gene_id: Lspi_1316
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase (NAD+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: Lspi_1317
symbol: Lspi_1317
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: Lspi_1319
symbol: Lspi_1319
gene_biotype: protein_coding
description:
  Ribosomal large subunit (23S rRNA) pseudouridine synthase C; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: Lspi_1324
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: Lspi_1325
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: Lspi_1326
symbol: Lspi_1326
gene_biotype: protein_coding
description:
  N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Belongs to the protein N5-glutamine methyltransferase family.


ensembl_gene_id: Lspi_1333
symbol: efp
gene_biotype: protein_coding
description:
  Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family.


ensembl_gene_id: Lspi_1360
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: Lspi_1381
symbol: hemF
gene_biotype: protein_coding
description:
  Oxygen-dependent coproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.


ensembl_gene_id: Lspi_1382
symbol: flgB
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: Lspi_1384
symbol: flgD
gene_biotype: protein_coding
description:
  Flagellar basal body rod modification protein; Required for flagellar hook formation. May act as a scaffolding protein.


ensembl_gene_id: Lspi_1388
symbol: flgH
gene_biotype: protein_coding
description:
  Flagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: Lspi_1389
symbol: flgI
gene_biotype: protein_coding
description:
  Flagellar P-ring protein (precursor) FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: Lspi_1412
symbol: tpm
gene_biotype: protein_coding
description:
  Thiopurine S-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family.


ensembl_gene_id: Lspi_1420
symbol: Lspi_1420
gene_biotype: protein_coding
description:
  Hypothetical protein; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.


ensembl_gene_id: Lspi_1448
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: Lspi_1455
symbol: lidK
gene_biotype: protein_coding
description:
  (CDP-alcohol) phosphatidyltransferase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: Lspi_1466
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: Lspi_1468
symbol: tolQ
gene_biotype: protein_coding
description:
  Biopolymer transport protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: Lspi_1469
symbol: tolR
gene_biotype: protein_coding
description:
  Membrane spanning protein in TolA-TolQ-TolR complex; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: Lspi_1471
symbol: tolB
gene_biotype: protein_coding
description:
  TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: Lspi_1475
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: Lspi_1477
symbol: glpD
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: Lspi_1478
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.


ensembl_gene_id: Lspi_1480
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: Lspi_1481
symbol: serC
gene_biotype: protein_coding
description:
  Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.


ensembl_gene_id: Lspi_1482
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: Lspi_1484
symbol: Lspi_1484
gene_biotype: protein_coding
description:
  30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.


ensembl_gene_id: Lspi_1486
symbol: lapB
gene_biotype: protein_coding
description:
  Tetratricopeptide repeat protein; Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane; Belongs to the LapB family.


ensembl_gene_id: Lspi_1488
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5`-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: Lspi_1494
symbol: ubiC
gene_biotype: protein_coding
description:
  4-hydroxybenzoate synthetase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family.


ensembl_gene_id: Lspi_1495
symbol: ubiA
gene_biotype: protein_coding
description:
  4-hydroxybenzoate-octaprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.


ensembl_gene_id: Lspi_1496
symbol: deoC
gene_biotype: protein_coding
description:
  2-deoxyribose-5-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate.


ensembl_gene_id: Lspi_1497
symbol: xapA
gene_biotype: protein_coding
description:
  Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: Lspi_1512
symbol: ybeY
gene_biotype: protein_coding
description:
  Metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: Lspi_1517
symbol: scpA
gene_biotype: protein_coding
description:
  Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: Lspi_1518
symbol: scpB
gene_biotype: protein_coding
description:
  Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: Lspi_1521
symbol: rumA
gene_biotype: protein_coding
description:
  23S rRNA (uracil-5-)-methyltransferase RumA; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily.


ensembl_gene_id: Lspi_1522
symbol: relA
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: Lspi_1528
symbol: yjbN
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase A; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: Lspi_1529
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase, secretion protein SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family.


ensembl_gene_id: Lspi_1535
symbol: erpA
gene_biotype: protein_coding
description:
  Iron-sulfur cluster assembly accessory protein; Required for insertion of 4Fe-4S clusters for at least IspG.


ensembl_gene_id: Lspi_1536
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA-specific 2-thiouridylase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: Lspi_1539
symbol: plsX
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate acyltransferase PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: Lspi_1540
symbol: fabH_2
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: Lspi_1542
symbol: fabG_2
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Lspi_1544
symbol: fabF_1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: Lspi_1545
symbol: mltG
gene_biotype: protein_coding
description:
  Periplasmic solute-binding protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.


ensembl_gene_id: Lspi_1546
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: Lspi_1551
symbol: anmK
gene_biotype: protein_coding
description:
  anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.


ensembl_gene_id: Lspi_1568
symbol: lpxB
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: Lspi_1571
symbol: rodA
gene_biotype: protein_coding
description:
  Rod shape-determining protein rodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: Lspi_1572
symbol: mrdA
gene_biotype: protein_coding
description:
  Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.


ensembl_gene_id: Lspi_1573
symbol: rlmH
gene_biotype: protein_coding
description:
  rRNA large subunit methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: Lspi_1574
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: Lspi_1581
symbol: dnaQ
gene_biotype: protein_coding
description:
  DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.


ensembl_gene_id: Lspi_1583
symbol: zapD
gene_biotype: protein_coding
description:
  Cell division protein ZapD; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity.


ensembl_gene_id: Lspi_1584
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: Lspi_1587
symbol: bioA
gene_biotype: protein_coding
description:
  Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: Lspi_1588
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: Lspi_1591
symbol: bioD
gene_biotype: protein_coding
description:
  Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: Lspi_1594
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: Lspi_1596
symbol: mutH
gene_biotype: protein_coding
description:
  DNA mismatch repair protein; Sequence-specific endonuclease that cleaves unmethylated GATC sequences. It is involved in DNA mismatch repair. Belongs to the MutH family.


ensembl_gene_id: Lspi_1601
symbol: ydfG
gene_biotype: protein_coding
description:
  NADP-dependent L-serine/L-allo-threonine dehydrogenase ydfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Lspi_1604
symbol: thiDE
gene_biotype: protein_coding
description:
  Bifunctional phosphomethylpyrimidine kinase ThiD/thiamin- phosphate pyrophosphorylase ThiE; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: Lspi_1634
symbol: fadB
gene_biotype: protein_coding
description:
  3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Lspi_1637
symbol: cutE
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: Lspi_1639
symbol: rlpB
gene_biotype: protein_coding
description:
  Rare lipoprotein B; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane.


ensembl_gene_id: Lspi_1641
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase NadD; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: Lspi_1646
symbol: accD
gene_biotype: protein_coding
description:
  Acetyl CoA carboxylase carboxyltransferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: Lspi_1647
symbol: flaA
gene_biotype: protein_coding
description:
  Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: Lspi_1649
symbol: fliD
gene_biotype: protein_coding
description:
  Flagellar hook associated protein 2 FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: Lspi_1652
symbol: rlpA
gene_biotype: protein_coding
description:
  Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: Lspi_1653
symbol: dacA
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5); Belongs to the peptidase S11 family.


ensembl_gene_id: Lspi_1656
symbol: lipB
gene_biotype: protein_coding
description:
  Lipoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: Lspi_1660
symbol: pntB
gene_biotype: protein_coding
description:
  NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.


ensembl_gene_id: Lspi_1675
symbol: Lspi_1675
gene_biotype: protein_coding
description:
  Oxidoreductase dehydrogenase, short chain; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Lspi_1677
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: Lspi_1697
symbol: dapD
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family.


ensembl_gene_id: Lspi_1698
symbol: dapE
gene_biotype: protein_coding
description:
  Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.


ensembl_gene_id: Lspi_1699
symbol: Lspi_1699
gene_biotype: protein_coding
description:
  Amino acid transporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: Lspi_1710
symbol: def-2
gene_biotype: protein_coding
description:
  Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: Lspi_1724
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III subunit tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: Lspi_1725
symbol: ybaB
gene_biotype: protein_coding
description:
  Nucleoid-associated protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: Lspi_1726
symbol: recR
gene_biotype: protein_coding
description:
  Recombinational DNA repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: Lspi_1734
symbol: Lspi_1734
gene_biotype: protein_coding
description:
  Integral membrane protein, AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: Lspi_1736
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein Ffh; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual comp [...]


ensembl_gene_id: Lspi_1738
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA-processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: Lspi_1739
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine N1) methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: Lspi_1740
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: Lspi_1753
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: Lspi_1766
symbol: smpA
gene_biotype: protein_coding
description:
  tmRNA-binding small protein A; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: Lspi_1771
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: Lspi_1773
symbol: trkH
gene_biotype: protein_coding
description:
  Trk system potassium uptake protein TrkH; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.


ensembl_gene_id: Lspi_1776
symbol: fabFn
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: Lspi_1786
symbol: ssb
gene_biotype: protein_coding
description:
  Single-strand binding protein (SSB) (Helix-destabilizing protein); Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: Lspi_1790
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: Lspi_1791
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: Lspi_1792
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: Lspi_1793
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: Lspi_1794
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: Lspi_1795
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: Lspi_1797
symbol: rpsE
gene_biotype: protein_coding
description:
  30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: Lspi_1798
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: Lspi_1799
symbol: rplF
gene_biotype: protein_coding
description:
  50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: Lspi_1800
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: Lspi_1802
symbol: rplE
gene_biotype: protein_coding
description:
  50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: Lspi_1803
symbol: rplX
gene_biotype: protein_coding
description:
  50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: Lspi_1804
symbol: rplN
gene_biotype: protein_coding
description:
  50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: Lspi_1805
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: Lspi_1807
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: Lspi_1808
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: Lspi_1809
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: Lspi_1810
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: Lspi_1811
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: Lspi_1812
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: Lspi_1814
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.


ensembl_gene_id: Lspi_1815
symbol: rpsJ
gene_biotype: protein_coding
description:
  30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: Lspi_1816
symbol: tuf
gene_biotype: protein_coding
description:
  Elongation factor Tu (EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: Lspi_1817
symbol: fusA
gene_biotype: protein_coding
description:
  Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: Lspi_1818
symbol: rpsG
gene_biotype: protein_coding
description:
  30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: Lspi_1819
symbol: rpsL
gene_biotype: protein_coding
description:
  30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: Lspi_1820
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: Lspi_1822
symbol: rplL
gene_biotype: protein_coding
description:
  50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: Lspi_1823
symbol: rplJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: Lspi_1824
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: Lspi_1825
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: Lspi_1826
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: Lspi_1827
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase secE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family.


ensembl_gene_id: Lspi_1828
symbol: ywtG
gene_biotype: protein_coding
description:
  D-xylose proton symporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: Lspi_1831
symbol: edd
gene_biotype: protein_coding
description:
  Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.


ensembl_gene_id: Lspi_1833
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: Lspi_1879
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: Lspi_1885
symbol: alr
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: Lspi_1886
symbol: dnaB
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: Lspi_1892
symbol: nadE
gene_biotype: protein_coding
description:
  Glutamine dependent NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: Lspi_1915
symbol: lolD-2
gene_biotype: protein_coding
description:
  ABC transporter ATP binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.


ensembl_gene_id: Lspi_1923
symbol: yggX
gene_biotype: protein_coding
description:
  Protein that protects iron-sulfur proteins against oxidative damage; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes.


ensembl_gene_id: Lspi_1924
symbol: psuG
gene_biotype: protein_coding
description:
  Indigoidine synthase A-like protein involved in pigment biosynthesis; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family.


ensembl_gene_id: Lspi_1946
symbol: murD_2
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: Lspi_2001
symbol: ant1
gene_biotype: protein_coding
description:
  Streptomycin 3''-adenylyltransferase; Mediates bacterial resistance to the antibiotics streptomycin and spectomycin.


ensembl_gene_id: Lspi_2040
symbol: merP
gene_biotype: protein_coding
description:
  Mercuric transport protein periplasmic component precursor; Involved in mercury resistance. Acts as a mercury scavenger that specifically binds to a mercuric ion in the periplasm and probably passes it to the cytoplasmic mercuric reductase MerA via the mercuric transport protein MerT.


ensembl_gene_id: Lspi_2047
symbol: Lspi_2047
gene_biotype: protein_coding
description:
  Cation efflux system protein cusA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: Lspi_2048
symbol: cusB_1
gene_biotype: protein_coding
description:
  Copper/silver efflux system, membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Lspi_2069
symbol: tkt
gene_biotype: protein_coding
description:
  Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.


ensembl_gene_id: Lspi_2070
symbol: gap
gene_biotype: protein_coding
description:
  Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: Lspi_2073
symbol: Lspi_2073
gene_biotype: protein_coding
description:
  ProQ; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family.


ensembl_gene_id: Lspi_2075
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: Lspi_2080
symbol: acsB
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.


ensembl_gene_id: Lspi_2081
symbol: engB
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTP-binding protein YsxC; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: Lspi_2092
symbol: gcvT
gene_biotype: protein_coding
description:
  Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine.


ensembl_gene_id: Lspi_2093
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: Lspi_2094
symbol: gcvPA
gene_biotype: protein_coding
description:
  Putative glycine dehydrogenase [decarboxylating] subunit 1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.


ensembl_gene_id: Lspi_2096
symbol: gcsB
gene_biotype: protein_coding
description:
  Glycine dehydrogenase subunit 2; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily.


ensembl_gene_id: Lspi_2102
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: Lspi_2108
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: Lspi_2109
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: Lspi_2113
symbol: thyA
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: Lspi_2114
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: Lspi_2117
symbol: rppH
gene_biotype: protein_coding
description:
  Dinucleoside polyphosphate hydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.


ensembl_gene_id: Lspi_2121
symbol: glmU
gene_biotype: protein_coding
description:
  Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: Lspi_2123
symbol: corA
gene_biotype: protein_coding
description:
  Cobalt/magnesium uptake transporter; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: Lspi_2127
symbol: Lspi_2127
gene_biotype: protein_coding
description:
  HupB DNA binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: Lspi_2128
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: Lspi_2129
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease, ATP binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: Lspi_2130
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: Lspi_2131
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: Lspi_2141
symbol: spoT
gene_biotype: protein_coding
description:
  Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: Lspi_2142
symbol: rpoZ
gene_biotype: protein_coding
description:
  RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: Lspi_2145
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: Lspi_2147
symbol: Lspi_2147
gene_biotype: protein_coding
description:
  Pyridoxal-5'-phosphate dependent enzyme family transporter protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: Lspi_2148
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: Lspi_2155
symbol: Lspi_2155
gene_biotype: protein_coding
description:
  Multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: Lspi_2156
symbol: Lspi_2156
gene_biotype: protein_coding
description:
  Thermostable carboxypeptidase 1; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.


ensembl_gene_id: Lspi_2160
symbol: sahH
gene_biotype: protein_coding
description:
  S-adenosyl-L-homocysteine hydrolase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: Lspi_2161
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: Lspi_2163
symbol: dnaJ_2
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: Lspi_2165
symbol: grpE
gene_biotype: protein_coding
description:
  Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- [...]


ensembl_gene_id: Lspi_2168
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: Lspi_2172
symbol: folB
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase FolB; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: Lspi_2177
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: Lspi_2178
symbol: Lspi_2178
gene_biotype: protein_coding
description:
  Cation efflux family protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: Lspi_2180
symbol: Lspi_2180
gene_biotype: protein_coding
description:
  Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: Lspi_2182
symbol: Lspi_2182
gene_biotype: protein_coding
description:
  Short chain dehydrogenase/reductase family oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Lspi_2183
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: Lspi_2185
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: Lspi_2195
symbol: yacG
gene_biotype: protein_coding
description:
  DNA gyrase inhibitor YacG; Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C- terminal domain of GyrB, which probably disrupts DNA binding by the gyrase.


ensembl_gene_id: Lspi_2201
symbol: aroK-2
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: Lspi_2209
symbol: obg
gene_biotype: protein_coding
description:
  GTP-binding protein, GTP1/Obg family; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: Lspi_2211
symbol: rplU
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: Lspi_2212
symbol: rplY
gene_biotype: protein_coding
description:
  50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: Lspi_2213
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: Lspi_2214
symbol: ychF
gene_biotype: protein_coding
description:
  GTP-binding protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: Lspi_2228
symbol: pdhA
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase e1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).


ensembl_gene_id: Lspi_2233
symbol: minC
gene_biotype: protein_coding
description:
  Septum site determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: Lspi_2234
symbol: lpxH
gene_biotype: protein_coding
description:
  UDP-2,3-diacylglucosamine hydrolase; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: Lspi_2249
symbol: birA
gene_biotype: protein_coding
description:
  biotin-[acetylCoA carboxylase] holoenzyme synthetase and biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon.


ensembl_gene_id: Lspi_2251
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: Lspi_2252
symbol: tilS
gene_biotype: protein_coding
description:
  Cell cycle protein MesJ; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: Lspi_2260
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: Lspi_2263
symbol: ppsA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: Lspi_2266
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: Lspi_2271
symbol: mreD
gene_biotype: protein_coding
description:
  Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family.


ensembl_gene_id: Lspi_2274
symbol: clpS
gene_biotype: protein_coding
description:
  Regulatory protein for ClpA substrate specificity; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: Lspi_2276
symbol: folD
gene_biotype: protein_coding
description:
  Bifunctional Methylenetetrahydrofolate dehydrogenase/Methenyltetrahydrofolate cyclohydrolase FolD; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: Lspi_2278
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: Lspi_2280
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: Lspi_2281
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: Lspi_2288
symbol: lspE
gene_biotype: protein_coding
description:
  Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.


ensembl_gene_id: Lspi_2292
symbol: rluD
gene_biotype: protein_coding
description:
  Uracil hydrolyase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: Lspi_2293
symbol: miaB
gene_biotype: protein_coding
description:
  (dimethylallyl)adenosine tRNA methylthiotransferase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: Lspi_2298
symbol: Lspi_2298
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E1 component oxidoreductase protein AceE; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: Lspi_2299
symbol: Lspi_2299
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E2 component; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: Lspi_2303
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: Lspi_2304
symbol: yfgB
gene_biotype: protein_coding
description:
  Fe-S containing enzyme; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: Lspi_2309
symbol: bamB
gene_biotype: protein_coding
description:
  PQQ (pyrrolo quinoline) WD40-like repeat, enzyme repeat domain protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: Lspi_2310
symbol: engA
gene_biotype: protein_coding
description:
  GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: Lspi_2372
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: Lspi_2399
symbol: hypF
gene_biotype: protein_coding
description:
  Hydrogenase maturation protein HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide.


ensembl_gene_id: Lspi_2401
symbol: hypA
gene_biotype: protein_coding
description:
  Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.


ensembl_gene_id: Lspi_2418
symbol: pcnB
gene_biotype: protein_coding
description:
  poly(A) polymerase I; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: Lspi_2423
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase (Acetokinase); Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: Lspi_2424
symbol: Lspi_2424
gene_biotype: protein_coding
description:
  Phosphate acetyl/butaryl transferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.


ensembl_gene_id: Lspi_2426
symbol: mnmC
gene_biotype: protein_coding
description:
  tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.


ensembl_gene_id: Lspi_2429
symbol: prpB
gene_biotype: protein_coding
description:
  2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.


ensembl_gene_id: Lspi_2432
symbol: Lspi_2432
gene_biotype: protein_coding
description:
  Putative phosphotransferase; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: Lspi_2435
symbol: Lspi_2435
gene_biotype: protein_coding
description:
  Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.


ensembl_gene_id: Lspi_2453
symbol: Lspi_2453
gene_biotype: protein_coding
description:
  Zinc binding dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.


ensembl_gene_id: Lspi_2458
symbol: Lspi_2458
gene_biotype: protein_coding
description:
  Putative sodium/hydrogen exchanger family protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: Lspi_2470
symbol: pcp
gene_biotype: protein_coding
description:
  Pyrrolidone-carboxylate peptidase; Removes 5-oxoproline from various penultimate amino acid residues except L-proline.


ensembl_gene_id: Lspi_2542
symbol: Lspi_2542
gene_biotype: protein_coding
description:
  Deoxyribonucleotide triphosphate pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: Lspi_2553
symbol: dut
gene_biotype: protein_coding
description:
  Deoxyuridinetriphosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: Lspi_2554
symbol: Lspi_2554
gene_biotype: protein_coding
description:
  Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: Lspi_2561
symbol: Lspi_2561
gene_biotype: protein_coding
description:
  Carboxymuconolactone decarboxylase family transporter; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: Lspi_2580
symbol: Lspi_2580
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: Lspi_2587
symbol: nhaA
gene_biotype: protein_coding
description:
  pH-dependent sodium/proton antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.


ensembl_gene_id: Lspi_2596
symbol: htpB
gene_biotype: protein_coding
description:
  Molecular chaperone GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: Lspi_2597
symbol: groES
gene_biotype: protein_coding
description:
  Co-chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: Lspi_2598
symbol: dsbD
gene_biotype: protein_coding
description:
  Thiol:disulfide interchange protein DsbD; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily.


ensembl_gene_id: Lspi_2601
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: Lspi_2602
symbol: Lspi_2602
gene_biotype: protein_coding
description:
  Adenylyl transferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB [...]


ensembl_gene_id: Lspi_2606
symbol: pgpA
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphatase A; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).


ensembl_gene_id: Lspi_2607
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine monophosphate kinase (AIR synthase); Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: Lspi_2608
symbol: nusB
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: Lspi_2609
symbol: nrdR
gene_biotype: protein_coding
description:
  NrdR family transcriptional regulator; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: Lspi_2610
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: Lspi_2616
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: Lspi_2621
symbol: hutG
gene_biotype: protein_coding
description:
  Formimidoylglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.


ensembl_gene_id: Lspi_2626
symbol: tdh
gene_biotype: protein_coding
description:
  Threonine(-3-)dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family.


ensembl_gene_id: Lspi_2627
symbol: kbl
gene_biotype: protein_coding
description:
  2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.


ensembl_gene_id: Lspi_2630
symbol: ydaO
gene_biotype: protein_coding
description:
  C32 tRNA thiolase; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.


ensembl_gene_id: Lspi_2633
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacy [...]


ensembl_gene_id: Lspi_2641
symbol: Lspi_2641
gene_biotype: protein_coding
description:
  ABC dipeptide/oligopeptide/nickel transport, ATPase component; Belongs to the ABC transporter superfamily.


ensembl_gene_id: Lspi_2644
symbol: lpxK_2
gene_biotype: protein_coding
description:
  Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: Lspi_2645
symbol: msbA
gene_biotype: protein_coding
description:
  ABC transporter, ATP binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.


ensembl_gene_id: Lspi_2646
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: Lspi_2659
symbol: speA
gene_biotype: protein_coding
description:
  Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.


ensembl_gene_id: Lspi_2664
symbol: metN
gene_biotype: protein_coding
description:
  D-methionine transport ATP binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: Lspi_2692
symbol: lysAC
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase, aspartate kinase (fusion of lysA and lysC); Belongs to the Orn/Lys/Arg decarboxylase class-II family.


ensembl_gene_id: Lspi_2694
symbol: mrp
gene_biotype: protein_coding
description:
  ATPase; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: Lspi_2695
symbol: parE
gene_biotype: protein_coding
description:
  DNA topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily.


ensembl_gene_id: Lspi_2789
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: Lspi_2790
symbol: rnfB
gene_biotype: protein_coding
description:
  Electron transport complex protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.


ensembl_gene_id: Lspi_2791
symbol: metG
gene_biotype: protein_coding
description:
  Methionyl tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: Lspi_2793
symbol: queC
gene_biotype: protein_coding
description:
  ExsB protein; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.


ensembl_gene_id: Lspi_2795
symbol: cpsB
gene_biotype: protein_coding
description:
  Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.


ensembl_gene_id: Lspi_2797
symbol: gidA
gene_biotype: protein_coding
description:
  Glucose-inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: Lspi_2798
symbol: gidB
gene_biotype: protein_coding
description:
  Glucose inhibited division protein B GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.


ensembl_gene_id: Lspi_2804
symbol: coxA
gene_biotype: protein_coding
description:
  Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.


ensembl_gene_id: Lspi_2805
symbol: coxB
gene_biotype: protein_coding
description:
  Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).


ensembl_gene_id: Lspi_2822
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: Lspi_2837
symbol: Lspi_2837
gene_biotype: protein_coding
description:
  Membrane protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: Lspi_2845
symbol: msrA_2
gene_biotype: protein_coding
description:
  Bifunctional methionine sulfoxide reductase B/A protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: Lspi_2852
symbol: tatA
gene_biotype: protein_coding
description:
  TatA protein(twin arginine translocation); Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: Lspi_2853
symbol: ubiB
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis AarF; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis.


ensembl_gene_id: Lspi_2855
symbol: ubiE
gene_biotype: protein_coding
description:
  Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).


ensembl_gene_id: Lspi_2867
symbol: coq7
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis protein; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.


ensembl_gene_id: Lspi_2872
symbol: Lspi_2872
gene_biotype: protein_coding
description:
  Lipid A palmitoyltransferase; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors.


ensembl_gene_id: Lspi_2877
symbol: rlmL
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase K/L; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family.


ensembl_gene_id: Lspi_2882
symbol: rsmJ
gene_biotype: protein_coding
description:
  SAM-dependent methyltransferase; Specifically methylates the guanosine in position 1516 of 16S rRNA.


ensembl_gene_id: Lspi_2889
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyr-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: Lspi_2891
symbol: trmL
gene_biotype: protein_coding
description:
  RNA methyltransferase TrmH family, group 2; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.


# pathwayInfo

id: CL:1025
description: Leucine biosynthetic process, and UDP-N-acetylglucosamine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1025_Leucine_biosynthetic_process,_and_UDP-N-acetylglucosamine_metabolic_process


id: CL:1035
description: Mixed, incl. Vitamin metabolic process, and Deoxyribonucleotide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1035_Mixed,_incl._Vitamin_metabolic_process,_and_Deoxyribonucleotide_metabolic_process


id: CL:1036
description: Mixed, incl. Riboflavin metabolic process, and Tetrahydrofolate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1036_Mixed,_incl._Riboflavin_metabolic_process,_and_Tetrahydrofolate_biosynthetic_process


id: CL:1038
description: Riboflavin metabolic process, and Tetrahydrofolate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1038_Riboflavin_metabolic_process,_and_Tetrahydrofolate_biosynthetic_process


id: CL:1050
description: Tetrahydrofolate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1050_Tetrahydrofolate_biosynthetic_process


id: CL:1064
description: Mixed, incl. Deoxyribonucleotide biosynthetic process, and AMP salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1064_Mixed,_incl._Deoxyribonucleotide_biosynthetic_process,_and_AMP_salvage


id: CL:1066
description: Deoxyribonucleoside monophosphate metabolic process, and Flavoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1066_Deoxyribonucleoside_monophosphate_metabolic_process,_and_Flavoprotein


id: CL:1088
description: Pantothenate biosynthesis, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1088_Pantothenate_biosynthesis,_and_Coenzyme_A_biosynthesis


id: CL:1102
description: Cysteine and methionine metabolism, and Cytosol aminopeptidase family, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1102_Cysteine_and_methionine_metabolism,_and_Cytosol_aminopeptidase_family,_catalytic_domain


id: CL:1104
description: Cysteine biosynthetic process, and Adenosylhomocysteinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1104_Cysteine_biosynthetic_process,_and_Adenosylhomocysteinase_activity


id: CL:1119
description: Aminopeptidase, and Glutathione biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1119_Aminopeptidase,_and_Glutathione_biosynthetic_process


id: CL:1138
description: Mixed, incl. Dipeptidase, and Thymine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1138_Mixed,_incl._Dipeptidase,_and_Thymine_metabolic_process


id: CL:1147
description: Mixed, incl. Thiamine diphosphate metabolic process, and Rhodanese-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1147_Mixed,_incl._Thiamine_diphosphate_metabolic_process,_and_Rhodanese-like_domain


id: CL:1149
description: Mixed, incl. Thiamine diphosphate metabolic process, and PP-loop family
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1149_Mixed,_incl._Thiamine_diphosphate_metabolic_process,_and_PP-loop_family


id: CL:1174
description: Mixed, incl. Biotin metabolic process, and Threonine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1174_Mixed,_incl._Biotin_metabolic_process,_and_Threonine_catabolic_process


id: CL:1194
description: Mixed, incl. Threonine catabolic process, and PP-loop family
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1194_Mixed,_incl._Threonine_catabolic_process,_and_PP-loop_family


id: CL:120
description: Mixed, incl. Translation, and Ribosome biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:120_Mixed,_incl._Translation,_and_Ribosome_biogenesis


id: CL:1207
description: Mixed, incl. Carbon metabolism, and Fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1207_Mixed,_incl._Carbon_metabolism,_and_Fatty_acid_metabolic_process


id: CL:1208
description: Carbon metabolism, and Fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1208_Carbon_metabolism,_and_Fatty_acid_metabolic_process


id: CL:1209
description: Mixed, incl. Carbon metabolism, and Fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1209_Mixed,_incl._Carbon_metabolism,_and_Fatty_acid_metabolic_process


id: CL:1210
description: Carbon metabolism, and Fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1210_Carbon_metabolism,_and_Fatty_acid_metabolic_process


id: CL:1212
description: Citrate cycle (TCA cycle), and Valine, leucine and isoleucine degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1212_Citrate_cycle_(TCA_cycle),_and_Valine,_leucine_and_isoleucine_degradation


id: CL:1213
description: Citrate cycle (TCA cycle), and Valine, leucine and isoleucine degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1213_Citrate_cycle_(TCA_cycle),_and_Valine,_leucine_and_isoleucine_degradation


id: CL:1214
description: Citrate cycle (TCA cycle), and Propanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1214_Citrate_cycle_(TCA_cycle),_and_Propanoate_metabolism


id: CL:1215
description: Tricarboxylic acid cycle, and acetyl-CoA biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1215_Tricarboxylic_acid_cycle,_and_acetyl-CoA_biosynthetic_process


id: CL:122
description: Translation, and Ribosome biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:122_Translation,_and_Ribosome_biogenesis


id: CL:1238
description: Propionate metabolic process, and Aconitase C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1238_Propionate_metabolic_process,_and_Aconitase_C-terminal_domain


id: CL:1249
description: Mixed, incl. acetyl-CoA biosynthetic process, and Thymine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1249_Mixed,_incl._acetyl-CoA_biosynthetic_process,_and_Thymine_metabolic_process


id: CL:126
description: Translation, and Ribosome biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:126_Translation,_and_Ribosome_biogenesis


id: CL:1263
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1263_Pyridine_nucleotide-disulphide_oxidoreductase,_class_I,_and_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_disulfide_as_acceptor

description:
  Pyridine nucleotide-disulphide oxidoreductase, class I, and Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor


id: CL:1266
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1266_Pyruvate_dehydrogenase_complex,_and_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_disulfide_as_acceptor

description:
  Pyruvate dehydrogenase complex, and Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor


id: CL:128
description: Mixed, incl. Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:128_Mixed,_incl._Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:1285
description: Valine, leucine and isoleucine degradation, and Acyl-CoA dehydrogenase, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1285_Valine,_leucine_and_isoleucine_degradation,_and_Acyl-CoA_dehydrogenase,_N-terminal_domain


id: CL:1286
description: Valine, leucine and isoleucine degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1286_Valine,_leucine_and_isoleucine_degradation


id: CL:1288
description: Leucine catabolic process, and Enoyl-CoA hydratase/isomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1288_Leucine_catabolic_process,_and_Enoyl-CoA_hydratase/isomerase


id: CL:129
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:129_Mixed,_incl._Structural_constituent_of_ribosome,_and_Ribonucleoside_triphosphate_biosynthetic_process

description:
  Mixed, incl. Structural constituent of ribosome, and Ribonucleoside triphosphate biosynthetic process


id: CL:130
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:130_Mixed,_incl._Structural_constituent_of_ribosome,_and_Ribonucleoside_triphosphate_biosynthetic_process

description:
  Mixed, incl. Structural constituent of ribosome, and Ribonucleoside triphosphate biosynthetic process


id: CL:1309
description: Fatty acid degradation, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1309_Fatty_acid_degradation,_and_Electron_transfer_flavoprotein_domain


id: CL:1311
description: Acyl-CoA dehydrogenase, C-terminal, bacterial type, and Thiolase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1311_Acyl-CoA_dehydrogenase,_C-terminal,_bacterial_type,_and_Thiolase,_conserved_site


id: CL:132
description: Mixed, incl. Structural constituent of ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:132_Mixed,_incl._Structural_constituent_of_ribosome,_and_Translation_regulator_activity


id: CL:1321
description: Electron transfer flavoprotein domain, and acyl-CoA dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1321_Electron_transfer_flavoprotein_domain,_and_acyl-CoA_dehydrogenase_activity


id: CL:133
description: Structural constituent of ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:133_Structural_constituent_of_ribosome,_and_Translation_regulator_activity


id: CL:1333
description: Mixed, incl. Transketolase activity, and Periplasmic binding protein-like I
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1333_Mixed,_incl._Transketolase_activity,_and_Periplasmic_binding_protein-like_I


id: CL:134
description: Structural constituent of ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:134_Structural_constituent_of_ribosome,_and_Translation_regulator_activity


id: CL:1354
description: Mixed, incl. Fatty acid biosynthetic process, and AMP-binding enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1354_Mixed,_incl._Fatty_acid_biosynthetic_process,_and_AMP-binding_enzyme


id: CL:1356
description: Fatty acid biosynthetic process, and Condensation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1356_Fatty_acid_biosynthetic_process,_and_Condensation_domain


id: CL:1357
description: Fatty acid biosynthetic process, and Condensation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1357_Fatty_acid_biosynthetic_process,_and_Condensation_domain


id: CL:1358
description: Fatty acid biosynthetic process, and HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1358_Fatty_acid_biosynthetic_process,_and_HTH_domain


id: CL:1359
description: Fatty acid synthase activity, and Acyl carrier protein (ACP)
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1359_Fatty_acid_synthase_activity,_and_Acyl_carrier_protein_(ACP)


id: CL:136
description: Structural constituent of ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:136_Structural_constituent_of_ribosome,_and_Translation_regulator_activity


id: CL:1360
description: Fatty acid synthase activity, and Acyl carrier protein (ACP)
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1360_Fatty_acid_synthase_activity,_and_Acyl_carrier_protein_(ACP)


id: CL:1362
description: Enoyl-[acyl-carrier-protein] reductase (NADH), and Acyl carrier protein (ACP)
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1362_Enoyl-[acyl-carrier-protein]_reductase_(NADH),_and_Acyl_carrier_protein_(ACP)


id: CL:1379
description: Beta-ketoacyl synthase, and FabA-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1379_Beta-ketoacyl_synthase,_and_FabA-like_domain


id: CL:138
description: Structural constituent of ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:138_Structural_constituent_of_ribosome,_and_Translation_regulator_activity


id: CL:1388
description: acetyl-CoA carboxylase complex, and HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1388_acetyl-CoA_carboxylase_complex,_and_HTH_domain


id: CL:1402
description: Condensation domain, and Regulation of protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1402_Condensation_domain,_and_Regulation_of_protein_transport


id: CL:141
description: Structural constituent of ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:141_Structural_constituent_of_ribosome,_and_Translation_regulator_activity


id: CL:1416
description: Mixed, incl. Fatty acid elongation, and Beta-ketoacyl-[acyl-carrier-protein] synthase III
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1416_Mixed,_incl._Fatty_acid_elongation,_and_Beta-ketoacyl-[acyl-carrier-protein]_synthase_III


id: CL:1430
description: KR domain, and D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1430_KR_domain,_and_D-isomer_specific_2-hydroxyacid_dehydrogenase,_catalytic_domain


id: CL:1443
description: Mixed, incl. Poly-hydroxybutyrate metabolic process, and Acetoacetyl-CoA reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1443_Mixed,_incl._Poly-hydroxybutyrate_metabolic_process,_and_Acetoacetyl-CoA_reductase


id: CL:1444
description: Poly-hydroxybutyrate metabolic process, and Acetokinase family
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1444_Poly-hydroxybutyrate_metabolic_process,_and_Acetokinase_family


id: CL:1459
description: Synthesis and degradation of ketone bodies, and Acetoacetyl-CoA reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1459_Synthesis_and_degradation_of_ketone_bodies,_and_Acetoacetyl-CoA_reductase


id: CL:1468
description: Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1468_Pentose_phosphate_pathway,_and_Glycolysis


id: CL:1470
description: Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1470_Pentose_phosphate_pathway,_and_Glycolysis


id: CL:1471
description: Glycolytic process, and Pentose-phosphate shunt, non-oxidative branch
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1471_Glycolytic_process,_and_Pentose-phosphate_shunt,_non-oxidative_branch


id: CL:1495
description: Glucose 6-phosphate metabolic process, and KDPG/KHG aldolase
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1495_Glucose_6-phosphate_metabolic_process,_and_KDPG/KHG_aldolase


id: CL:1517
description: Mixed, incl. 2 iron, 2 sulfur cluster binding, and Amidohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1517_Mixed,_incl._2_iron,_2_sulfur_cluster_binding,_and_Amidohydrolase


id: CL:1518
description: Mixed, incl. Flavoprotein pyridine nucleotide cytochrome reductase, and Amidohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1518_Mixed,_incl._Flavoprotein_pyridine_nucleotide_cytochrome_reductase,_and_Amidohydrolase


id: CL:1519
description: Amidohydrolase, and Rieske [2Fe-2S] iron-sulphur domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1519_Amidohydrolase,_and_Rieske_[2Fe-2S]_iron-sulphur_domain


id: CL:1530
description: FAD-binding domain, and Transcription regulator Rrf2
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1530_FAD-binding_domain,_and_Transcription_regulator_Rrf2


id: CL:1541
description: Mixed, incl. Ammonia ligase activity, and Zinc-binding dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1541_Mixed,_incl._Ammonia_ligase_activity,_and_Zinc-binding_dehydrogenase


id: CL:1557
description: Oxidative phosphorylation, and Heme binding
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1557_Oxidative_phosphorylation,_and_Heme_binding


id: CL:1558
description: Oxidative phosphorylation, and Alpha/beta hydrolase fold-3
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1558_Oxidative_phosphorylation,_and_Alpha/beta_hydrolase_fold-3


id: CL:1563
description: Oxidoreduction-driven active transmembrane transporter activity, and Quinone
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1563_Oxidoreduction-driven_active_transmembrane_transporter_activity,_and_Quinone


id: CL:1564
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1564_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: CL:1589
description: Oxidoreduction-driven active transmembrane transporter activity, and Peptidase M16, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1589_Oxidoreduction-driven_active_transmembrane_transporter_activity,_and_Peptidase_M16,_N-terminal


id: CL:1591
description: Respiratory chain, and Rieske [2Fe-2S] domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1591_Respiratory_chain,_and_Rieske_[2Fe-2S]_domain


id: CL:160
description: Large ribosomal subunit, and Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:160_Large_ribosomal_subunit,_and_Structural_constituent_of_ribosome


id: CL:1603
description: Peptidase M16, N-terminal, and Acyl carrier activity
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1603_Peptidase_M16,_N-terminal,_and_Acyl_carrier_activity


id: CL:1624
description: Mixed, incl. Heme biosynthetic process, and Glutathione S-transferase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1624_Mixed,_incl._Heme_biosynthetic_process,_and_Glutathione_S-transferase,_C-terminal


id: CL:1626
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1626_Mixed,_incl._UbiA_prenyltransferase_conserved_site,_and_Biological_process_involved_in_interaction_with_host

description:
  Mixed, incl. UbiA prenyltransferase conserved site, and Biological process involved in interaction with host


id: CL:1644
description: Cytochrome C oxidase, cbb3-type, subunit III , and Copper ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1644_Cytochrome_C_oxidase,_cbb3-type,_subunit_III_,_and_Copper_ion_binding


id: CL:1661
description: Mixed, incl. Histidine metabolism, and Oligopeptide transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1661_Mixed,_incl._Histidine_metabolism,_and_Oligopeptide_transmembrane_transporter_activity


id: CL:1663
description: Mixed, incl. Tripeptide transport, and DNA replication proofreading
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1663_Mixed,_incl._Tripeptide_transport,_and_DNA_replication_proofreading


id: CL:1684
description: Mixed, incl. Methylation, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1684_Mixed,_incl._Methylation,_and_Nitrogen_metabolism


id: CL:1685
description: Mostly uncharacterized, incl. Sulfate transport, and tRNA wobble uridine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1685_Mostly_uncharacterized,_incl._Sulfate_transport,_and_tRNA_wobble_uridine_modification


id: CL:1687
description: Mixed, incl. Sulfate transport, and tRNA wobble uridine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1687_Mixed,_incl._Sulfate_transport,_and_tRNA_wobble_uridine_modification


id: CL:1688
description: Mixed, incl. tRNA wobble uridine modification, and Serine/threonine-protein kinase, active site
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1688_Mixed,_incl._tRNA_wobble_uridine_modification,_and_Serine/threonine-protein_kinase,_active_site


id: CL:1690
description: Mixed, incl. tRNA wobble uridine modification, and Serine/threonine-protein kinase, active site
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1690_Mixed,_incl._tRNA_wobble_uridine_modification,_and_Serine/threonine-protein_kinase,_active_site


id: CL:1692
description: Mixed, incl. ANK repeat, and Adaptive Immune System
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1692_Mixed,_incl._ANK_repeat,_and_Adaptive_Immune_System


id: CL:1695
description: Mixed, incl. DHHA1 domain, and Xylan metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1695_Mixed,_incl._DHHA1_domain,_and_Xylan_metabolic_process


id: CL:1706
description: Mixed, incl. bis(5-nucleosyl)-tetraphosphatase activity, and ER-Phagosome pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1706_Mixed,_incl._bis(5-nucleosyl)-tetraphosphatase_activity,_and_ER-Phagosome_pathway


id: CL:1719
description: tRNA wobble uridine modification, and Pyrimidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1719_tRNA_wobble_uridine_modification,_and_Pyrimidine_metabolism


id: CL:1745
description: Sulfate transport, and Carbon utilization
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1745_Sulfate_transport,_and_Carbon_utilization


id: CL:1762
description: Mixed, incl. Von Willebrand factor (vWF) type A domain, and ATPase, AAA-3
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1762_Mixed,_incl._Von_Willebrand_factor_(vWF)_type_A_domain,_and_ATPase,_AAA-3


id: CL:1764
description: Von Willebrand factor (vWF) type A domain, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1764_Von_Willebrand_factor_(vWF)_type_A_domain,_and_Tetratricopeptide_repeat


id: CL:1785
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1785_Mostly_uncharacterized,_incl._Isoprenoid_catabolic_process,_and_Cytochrome_cd1-nitrite_reductase-like,_haem_d1_domain_superfamily

description:
  Mostly uncharacterized, incl. Isoprenoid catabolic process, and Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily


id: CL:1787
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1787_Mixed,_incl._Cytochrome_cd1-nitrite_reductase-like,_haem_d1_domain_superfamily,_and_Response_to_metal_ion

description:
  Mixed, incl. Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily, and Response to metal ion


id: CL:1809
description: Mixed, incl. Polysaccharide biosynthetic process, and Amino sugar and nucleotide sugar metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1809_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Amino_sugar_and_nucleotide_sugar_metabolism


id: CL:1810
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1810_Mixed,_incl._Amino_sugar_and_nucleotide_sugar_metabolism,_and_Cellular_carbohydrate_biosynthetic_process

description:
  Mixed, incl. Amino sugar and nucleotide sugar metabolism, and Cellular carbohydrate biosynthetic process


id: CL:1811
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1811_Mixed,_incl._Amino_sugar_and_nucleotide_sugar_metabolism,_and_Lipopolysaccharide_core_region_metabolic_process

description:
  Mixed, incl. Amino sugar and nucleotide sugar metabolism, and Lipopolysaccharide core region metabolic process


id: CL:1812
description: Amino sugar and nucleotide sugar metabolism, and Lipopolysaccharide core region metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1812_Amino_sugar_and_nucleotide_sugar_metabolism,_and_Lipopolysaccharide_core_region_metabolic_process


id: CL:1813
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1813_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Methyltransferase_domain


id: CL:1814
description: Mostly uncharacterized, incl. Methyltransferase domain, and MobA-like NTP transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1814_Mostly_uncharacterized,_incl._Methyltransferase_domain,_and_MobA-like_NTP_transferase


id: CL:1817
description: Mixed, incl. MobA-like NTP transferase, and 3(2),5-bisphosphate nucleotidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1817_Mixed,_incl._MobA-like_NTP_transferase,_and_3(2),5-bisphosphate_nucleotidase_activity


id: CL:1836
description: O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1836_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:1850
description: Amino sugar and nucleotide sugar metabolism, and Lipopolysaccharide core region metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1850_Amino_sugar_and_nucleotide_sugar_metabolism,_and_Lipopolysaccharide_core_region_metabolic_process


id: CL:1851
description: Nucleotide-sugar metabolic process, and Alpha-D-phosphohexomutase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1851_Nucleotide-sugar_metabolic_process,_and_Alpha-D-phosphohexomutase_superfamily


id: CL:1870
description: Lipopolysaccharide core region metabolic process, and Histidinol-phosphate phosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1870_Lipopolysaccharide_core_region_metabolic_process,_and_Histidinol-phosphate_phosphatase


id: CL:1882
description: Mixed, incl. ABC transporter, teichoic acids export TagH-like, and ABC-2 type transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1882_Mixed,_incl._ABC_transporter,_teichoic_acids_export_TagH-like,_and_ABC-2_type_transporter


id: CL:1894
description: Mixed, incl. Asparagine biosynthesis, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1894_Mixed,_incl._Asparagine_biosynthesis,_and_Glycosyl_transferases_group_1


id: CL:1908
description: UDP-glycosyltransferase activity, and Phosphatidic acid phosphatase type 2/haloperoxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1908_UDP-glycosyltransferase_activity,_and_Phosphatidic_acid_phosphatase_type_2/haloperoxidase


id: CL:1920
description: Mixed, incl. External encapsulating structure organization, and Lipid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1920_Mixed,_incl._External_encapsulating_structure_organization,_and_Lipid_biosynthetic_process


id: CL:1921
description: Mixed, incl. External encapsulating structure organization, and Lipid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1921_Mixed,_incl._External_encapsulating_structure_organization,_and_Lipid_biosynthetic_process


id: CL:1922
description: Mixed, incl. External encapsulating structure organization, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1922_Mixed,_incl._External_encapsulating_structure_organization,_and_Lipopolysaccharide_biosynthesis


id: CL:1923
description: Mixed, incl. Cell division, and Regulation of cell shape
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1923_Mixed,_incl._Cell_division,_and_Regulation_of_cell_shape


id: CL:1926
description: Regulation of cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1926_Regulation_of_cell_shape,_and_Cell_division_site


id: CL:1929
description: Peptidoglycan synthesis, and Reproduction
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1929_Peptidoglycan_synthesis,_and_Reproduction


id: CL:1933
description: Mur ligase, C-terminal, and Glycosyl transferase family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1933_Mur_ligase,_C-terminal,_and_Glycosyl_transferase_family_4


id: CL:1977
description: Mixed, incl. Lysozyme-like domain superfamily, and Periplasmic binding protein-like I
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:1977_Mixed,_incl._Lysozyme-like_domain_superfamily,_and_Periplasmic_binding_protein-like_I


id: CL:2000
description: Regulation of cell cycle, and ATP binding protein MinD/FleN
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2000_Regulation_of_cell_cycle,_and_ATP_binding_protein_MinD/FleN


id: CL:2011
description: Mixed, incl. Aminotransferase class IV, and RlpA-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2011_Mixed,_incl._Aminotransferase_class_IV,_and_RlpA-like_domain_superfamily


id: CL:2026
description: Mixed, incl. Lipopolysaccharide biosynthesis, and Membrane assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2026_Mixed,_incl._Lipopolysaccharide_biosynthesis,_and_Membrane_assembly


id: CL:2028
description: Mixed, incl. Membrane assembly, and Armadillo-type fold
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2028_Mixed,_incl._Membrane_assembly,_and_Armadillo-type_fold


id: CL:2052
description: Mixed, incl. Cell-substrate adhesion, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2052_Mixed,_incl._Cell-substrate_adhesion,_and_Tetratricopeptide_repeat


id: CL:2072
description: Mixed, incl. Lipid A biosynthesis, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2072_Mixed,_incl._Lipid_A_biosynthesis,_and_Lipopolysaccharide_biosynthesis


id: CL:2074
description: Lipid A biosynthesis, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2074_Lipid_A_biosynthesis,_and_Lipopolysaccharide_biosynthesis


id: CL:2075
description: Lipopolysaccharide biosynthesis, and SIS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2075_Lipopolysaccharide_biosynthesis,_and_SIS_domain


id: CL:2100
description: Lipopolysaccharide transport, and ATP-binding cassette (ABC) transporter complex
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2100_Lipopolysaccharide_transport,_and_ATP-binding_cassette_(ABC)_transporter_complex


id: CL:2111
description: Mixed, incl. Phospholipid transport, and GHMP kinase, C-terminal domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2111_Mixed,_incl._Phospholipid_transport,_and_GHMP_kinase,_C-terminal_domain_superfamily


id: CL:2112
description: Phospholipid transport, and BolA protein
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2112_Phospholipid_transport,_and_BolA_protein


id: CL:2136
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2136_GHMP_kinase,_C-terminal_domain_superfamily,_and_Intramolecular_oxidoreductase_activity,_transposing_C=C_bonds

description:
  GHMP kinase, C-terminal domain superfamily, and Intramolecular oxidoreductase activity, transposing C=C bonds


id: CL:2159
description: Mixed, incl. Nicotinate and nicotinamide metabolism, and PmbA/TldA metallopeptidase domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2159_Mixed,_incl._Nicotinate_and_nicotinamide_metabolism,_and_PmbA/TldA_metallopeptidase_domain_1


id: CL:216
description: Mixed, incl. L28p-like, and Zinc-binding ribosomal protein
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:216_Mixed,_incl._L28p-like,_and_Zinc-binding_ribosomal_protein


id: CL:2161
description: Nicotinate and nicotinamide metabolism, and Ribosomal large subunit assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2161_Nicotinate_and_nicotinamide_metabolism,_and_Ribosomal_large_subunit_assembly


id: CL:2163
description: Pyridine nucleotide biosynthetic process, and Isochorismatase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2163_Pyridine_nucleotide_biosynthetic_process,_and_Isochorismatase-like


id: CL:2165
description: Pyridine nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2165_Pyridine_nucleotide_biosynthetic_process


id: CL:2181
description: Quinolinate metabolic process, and De novo NAD biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2181_Quinolinate_metabolic_process,_and_De_novo_NAD_biosynthetic_process


id: CL:2195
description: Mixed, incl. NAD(P)+ transhydrogenase activity, and Alanine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2195_Mixed,_incl._NAD(P)+_transhydrogenase_activity,_and_Alanine_metabolic_process


id: CL:2196
description: NAD(P)+ transhydrogenase activity, and Alanine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2196_NAD(P)+_transhydrogenase_activity,_and_Alanine_metabolic_process


id: CL:2207
description: Mixed, incl. NAD+ kinase activity, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2207_Mixed,_incl._NAD+_kinase_activity,_and_AAA_domain


id: CL:2220
description: PmbA/TldA metallopeptidase domain 1, and Regulation of cell death
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2220_PmbA/TldA_metallopeptidase_domain_1,_and_Regulation_of_cell_death


id: CL:2236
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2236_Mixed,_incl._Glycerophospholipid_metabolism,_and_Negative_regulation_of_cellular_biosynthetic_process

description:
  Mixed, incl. Glycerophospholipid metabolism, and Negative regulation of cellular biosynthetic process


id: CL:2238
description: Mixed, incl. Glycerolipid metabolism, and Glycerophosphodiester phosphodiesterase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2238_Mixed,_incl._Glycerolipid_metabolism,_and_Glycerophosphodiester_phosphodiesterase_domain


id: CL:2241
description: Alditol phosphate metabolic process, and Phosphate acyltransferases
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2241_Alditol_phosphate_metabolic_process,_and_Phosphate_acyltransferases


id: CL:2268
description: Mixed, incl. Glycerolipid biosynthetic process, and ATP-cone domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2268_Mixed,_incl._Glycerolipid_biosynthetic_process,_and_ATP-cone_domain


id: CL:2269
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2269_Glycerolipid_biosynthetic_process,_and_Peptidase_M50,_putative_membrane-associated_zinc_metallopeptidase

description:
  Glycerolipid biosynthetic process, and Peptidase M50, putative membrane-associated zinc metallopeptidase


id: CL:2282
description: Mixed, incl. ATP-cone domain, and Thiamine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2282_Mixed,_incl._ATP-cone_domain,_and_Thiamine_biosynthesis


id: CL:2301
description: Signaling, and Cyclic nucleotide-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2301_Signaling,_and_Cyclic_nucleotide-binding_domain


id: CL:2303
description: Signaling, and Cyclic nucleotide-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2303_Signaling,_and_Cyclic_nucleotide-binding_domain


id: CL:2316
description: GGDEF domain, and cheY-homologous receiver domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2316_GGDEF_domain,_and_cheY-homologous_receiver_domain


id: CL:2320
description: GGDEF domain, and His Kinase A (phosphoacceptor) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2320_GGDEF_domain,_and_His_Kinase_A_(phosphoacceptor)_domain


id: CL:2323
description: PAS domain, and His Kinase A (phosphoacceptor) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2323_PAS_domain,_and_His_Kinase_A_(phosphoacceptor)_domain


id: CL:2328
description: PAS domain, and His Kinase A (phosphoacceptor) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2328_PAS_domain,_and_His_Kinase_A_(phosphoacceptor)_domain


id: CL:233
description: Small ribosomal subunit, and K Homology domain, type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:233_Small_ribosomal_subunit,_and_K_Homology_domain,_type_2


id: CL:2393
description: Cyclic nucleotide-binding domain, and Cyclic nucleotide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2393_Cyclic_nucleotide-binding_domain,_and_Cyclic_nucleotide_metabolic_process


id: CL:2422
description: Bacterial-type flagellum, and Bacterial flagellum biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2422_Bacterial-type_flagellum,_and_Bacterial_flagellum_biogenesis


id: CL:2425
description: Bacterial-type flagellum basal body, and Bacterial flagellum biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2425_Bacterial-type_flagellum_basal_body,_and_Bacterial_flagellum_biogenesis


id: CL:2426
description: Flagella basal body rod protein, and Bacterial-type flagellum basal body, rod
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2426_Flagella_basal_body_rod_protein,_and_Bacterial-type_flagellum_basal_body,_rod


id: CL:2429
description: Bacterial-type flagellum basal body, rod, and Flagellar basal body rod protein, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2429_Bacterial-type_flagellum_basal_body,_rod,_and_Flagellar_basal_body_rod_protein,_conserved_site


id: CL:2451
description: Bacterial-type flagellum basal body
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2451_Bacterial-type_flagellum_basal_body


id: CL:2453
description: Bacterial flagellum protein export, and Bacterial-type flagellum assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2453_Bacterial_flagellum_protein_export,_and_Bacterial-type_flagellum_assembly


id: CL:2489
description: Mixed, incl. Motility protein A-like, and Regulation of cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2489_Mixed,_incl._Motility_protein_A-like,_and_Regulation_of_cell_division


id: CL:2509
description: Mixed, incl. MerR-type HTH domain, and Copper ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2509_Mixed,_incl._MerR-type_HTH_domain,_and_Copper_ion_transport


id: CL:2512
description: Mixed, incl. Copper ion transport, and Superoxide dismutase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2512_Mixed,_incl._Copper_ion_transport,_and_Superoxide_dismutase_activity


id: CL:2528
description: Mixed, incl. MerR-type HTH domain, and Sigma-70 factor, region 1.2
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2528_Mixed,_incl._MerR-type_HTH_domain,_and_Sigma-70_factor,_region_1.2


id: CL:2543
description: Mixed, incl. Chromosome partition, and Two-component regulatory system
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2543_Mixed,_incl._Chromosome_partition,_and_Two-component_regulatory_system


id: CL:2544
description: Mixed, incl. Chromosome partition, and PHP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2544_Mixed,_incl._Chromosome_partition,_and_PHP_domain


id: CL:2558
description: Two-component regulatory system, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2558_Two-component_regulatory_system,_and_AAA_domain


id: CL:2574
description: Mixed, incl. PilZ domain, and Nucleobase catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2574_Mixed,_incl._PilZ_domain,_and_Nucleobase_catabolic_process


id: CL:2588
description: Mixed, incl. Dimeric alpha-beta barrel, and Xenobiotic catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2588_Mixed,_incl._Dimeric_alpha-beta_barrel,_and_Xenobiotic_catabolic_process


id: CL:2591
description: Mixed, incl. Xenobiotic catabolic process, and 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2591_Mixed,_incl._Xenobiotic_catabolic_process,_and_3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III


id: CL:2606
description: Mixed, incl. Solute-binding protein family 5, and O-methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2606_Mixed,_incl._Solute-binding_protein_family_5,_and_O-methyltransferase_domain


id: CL:2618
description: Mixed, incl. Bacterial periplasmic substrate-binding proteins, and Amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2618_Mixed,_incl._Bacterial_periplasmic_substrate-binding_proteins,_and_Amino_acid_transport


id: CL:2619
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2619_Mixed,_incl._Bacterial_periplasmic_substrate-binding_proteins,_and_Amino_acid_transmembrane_transport

description:
  Mixed, incl. Bacterial periplasmic substrate-binding proteins, and Amino acid transmembrane transport


id: CL:2621
description: Bacterial periplasmic substrate-binding proteins, and L-amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2621_Bacterial_periplasmic_substrate-binding_proteins,_and_L-amino_acid_transport


id: CL:2625
description: Bacterial periplasmic substrate-binding proteins, and ABC-type amino acid transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2625_Bacterial_periplasmic_substrate-binding_proteins,_and_ABC-type_amino_acid_transporter_activity


id: CL:2645
description: Mixed, incl. Secondary bile acid biosynthesis, and Phosphonate and phosphinate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2645_Mixed,_incl._Secondary_bile_acid_biosynthesis,_and_Phosphonate_and_phosphinate_metabolism


id: CL:2655
description: Mixed, incl. L-amino acid transport, and Protein kinase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2655_Mixed,_incl._L-amino_acid_transport,_and_Protein_kinase_domain


id: CL:2668
description: Mixed, incl. Carbohydrate derivative catabolic process, and Deaminase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2668_Mixed,_incl._Carbohydrate_derivative_catabolic_process,_and_Deaminase_activity


id: CL:2671
description: Mixed, incl. Carbohydrate derivative catabolic process, and Nucleotide salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2671_Mixed,_incl._Carbohydrate_derivative_catabolic_process,_and_Nucleotide_salvage


id: CL:2672
description: Mixed, incl. Nucleotide salvage, and Adenosine deaminase
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2672_Mixed,_incl._Nucleotide_salvage,_and_Adenosine_deaminase


id: CL:2675
description: UMP salvage, and Nucleoside catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2675_UMP_salvage,_and_Nucleoside_catabolic_process


id: CL:2692
description: Adenosine deaminase, and Purine-nucleoside phosphorylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2692_Adenosine_deaminase,_and_Purine-nucleoside_phosphorylase_activity


id: CL:2701
description: Mixed, incl. Nucleotide catabolic process, and Transglycosylase SLT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2701_Mixed,_incl._Nucleotide_catabolic_process,_and_Transglycosylase_SLT_domain


id: CL:2719
description: Sodium ion transmembrane transport, and tRNA-specific adenosine deaminase
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2719_Sodium_ion_transmembrane_transport,_and_tRNA-specific_adenosine_deaminase


id: CL:2731
description: Mixed, incl. Porphyrin-containing compound metabolic process, and Ubiquinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2731_Mixed,_incl._Porphyrin-containing_compound_metabolic_process,_and_Ubiquinone_metabolic_process


id: CL:2732
description: Mixed, incl. Porphyrin-containing compound metabolic process, and Ubiquinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2732_Mixed,_incl._Porphyrin-containing_compound_metabolic_process,_and_Ubiquinone_metabolic_process


id: CL:2733
description: Heme biosynthetic process, and TAT protein transport complex
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2733_Heme_biosynthetic_process,_and_TAT_protein_transport_complex


id: CL:2734
description: Porphyrin biosynthesis, and Elongator protein 3, MiaB family, Radical SAM
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2734_Porphyrin_biosynthesis,_and_Elongator_protein_3,_MiaB_family,_Radical_SAM


id: CL:2756
description: TAT protein transport complex, and Ubiquinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2756_TAT_protein_transport_complex,_and_Ubiquinone_biosynthesis


id: CL:2770
description: Mixed, incl. Ubiquinone biosynthesis, and Flavoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2770_Mixed,_incl._Ubiquinone_biosynthesis,_and_Flavoprotein


id: CL:2791
description: Mixed, incl. UspA, and Potassium transport
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2791_Mixed,_incl._UspA,_and_Potassium_transport


id: CL:2793
description: Mixed, incl. UspA, and CNNM, transmembrane domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2793_Mixed,_incl._UspA,_and_CNNM,_transmembrane_domain


id: CL:2814
description: Mixed, incl. Potassium transport, and Ubiquinone binding
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2814_Mixed,_incl._Potassium_transport,_and_Ubiquinone_binding


id: CL:2830
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2830_Mixed,_incl._Cytochrome_complex_assembly,_and_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors

description:
  Mixed, incl. Cytochrome complex assembly, and Oxidoreductase activity, acting on a sulfur group of donors


id: CL:2832
description: Cytochrome complex assembly, and Oxidoreductase activity, acting on a sulfur group of donors
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2832_Cytochrome_complex_assembly,_and_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: CL:2833
description: Oxidoreductase activity, acting on a sulfur group of donors, and Permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2833_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_and_Permease_family


id: CL:2835
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2835_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor,_and_Thioredoxin,_conserved_site

description:
  Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor, and Thioredoxin, conserved site


id: CL:2851
description: Mixed, incl. Transmembrane protein TMEM64, and Permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2851_Mixed,_incl._Transmembrane_protein_TMEM64,_and_Permease_family


id: CL:2866
description: Cytochrome complex assembly, and Dodecin
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2866_Cytochrome_complex_assembly,_and_Dodecin


id: CL:2892
description: Mixed, incl. DNA alkylation, and AhpD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2892_Mixed,_incl._DNA_alkylation,_and_AhpD-like


id: CL:2893
description: Mixed, incl. AhpD-like, and Tryptophan-tRNA ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2893_Mixed,_incl._AhpD-like,_and_Tryptophan-tRNA_ligase


id: CL:2896
description: AhpD-like, and DNA-binding HTH domain, TetR-type
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2896_AhpD-like,_and_DNA-binding_HTH_domain,_TetR-type


id: CL:2916
description: Mixed, incl. DNA alkylation, and Asp/Glu racemase
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2916_Mixed,_incl._DNA_alkylation,_and_Asp/Glu_racemase


id: CL:2937
description: Mixed, incl. Porin activity, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2937_Mixed,_incl._Porin_activity,_and_Signal


id: CL:2939
description: Mixed, incl. Porin activity, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2939_Mixed,_incl._Porin_activity,_and_Signal


id: CL:2941
description: Mostly uncharacterized, incl. Porin activity, and Cationic antimicrobial peptide (CAMP) resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2941_Mostly_uncharacterized,_incl._Porin_activity,_and_Cationic_antimicrobial_peptide_(CAMP)_resistance


id: CL:2942
description: Mostly uncharacterized, incl. Peptidoglycan-protein cross-linking, and Peptidase S24/S26A/S26B/S26C
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2942_Mostly_uncharacterized,_incl._Peptidoglycan-protein_cross-linking,_and_Peptidase_S24/S26A/S26B/S26C


id: CL:2944
description: Mostly uncharacterized, incl. LexA-like, and Peptidoglycan-protein cross-linking
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2944_Mostly_uncharacterized,_incl._LexA-like,_and_Peptidoglycan-protein_cross-linking


id: CL:2946
description: Mostly uncharacterized, incl. LexA-like, and Leucine-rich repeat domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2946_Mostly_uncharacterized,_incl._LexA-like,_and_Leucine-rich_repeat_domain_superfamily


id: CL:2949
description: Mostly uncharacterized, incl. 3D domain, and Cell septum
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2949_Mostly_uncharacterized,_incl._3D_domain,_and_Cell_septum


id: CL:2952
description: Mostly uncharacterized, incl. 3D domain, and Cell septum
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2952_Mostly_uncharacterized,_incl._3D_domain,_and_Cell_septum


id: CL:2955
description: Mixed, incl. Cell septum, and Diol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2955_Mixed,_incl._Cell_septum,_and_Diol_metabolic_process


id: CL:2987
description: Mixed, incl. LexA-like, and Peptidoglycan-protein cross-linking
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2987_Mixed,_incl._LexA-like,_and_Peptidoglycan-protein_cross-linking


id: CL:2989
description: Mixed, incl. LexA-like, and Bacterial-type flagellum-dependent swarming motility
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:2989_Mixed,_incl._LexA-like,_and_Bacterial-type_flagellum-dependent_swarming_motility


id: CL:3026
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3026_Mostly_uncharacterized,_incl._Tryptophan/tyrosine_transporter,_and_Type-IV_b_secretion_system,_inner-membrane_complex_component

description:
  Mostly uncharacterized, incl. Tryptophan/tyrosine transporter, and Type-IV b secretion system, inner-membrane complex component


id: CL:3027
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3027_Mostly_uncharacterized,_incl._Tryptophan/tyrosine_transporter,_and_Type-IV_b_secretion_system,_inner-membrane_complex_component

description:
  Mostly uncharacterized, incl. Tryptophan/tyrosine transporter, and Type-IV b secretion system, inner-membrane complex component


id: CL:3028
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3028_Mixed,_incl._Tryptophan/tyrosine_transporter,_and_Type-IV_b_secretion_system,_inner-membrane_complex_component

description:
  Mixed, incl. Tryptophan/tyrosine transporter, and Type-IV b secretion system, inner-membrane complex component


id: CL:3030
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3030_Mixed,_incl._Tryptophan/tyrosine_transporter,_and_Type-IV_b_secretion_system,_inner-membrane_complex_component

description:
  Mixed, incl. Tryptophan/tyrosine transporter, and Type-IV b secretion system, inner-membrane complex component


id: CL:3033
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3033_Mixed,_incl._Type-IV_b_secretion_system,_inner-membrane_complex_component,_and_Peptidoglycan-protein_cross-linking

description:
  Mixed, incl. Type-IV b secretion system, inner-membrane complex component, and Peptidoglycan-protein cross-linking


id: CL:3052
description: Mixed, incl. One carbon pool by folate, and Protein transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3052_Mixed,_incl._One_carbon_pool_by_folate,_and_Protein_transmembrane_transport


id: CL:3062
description: Mixed, incl. Pentapeptide repeat, and OmpA family
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3062_Mixed,_incl._Pentapeptide_repeat,_and_OmpA_family


id: CL:3067
description: Pentapeptide repeats (9 copies), and Lipoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3067_Pentapeptide_repeats_(9_copies),_and_Lipoprotein


id: CL:3086
description: Mixed, incl. dTDP metabolic process, and Helix_turn_helix, Lux Regulon
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3086_Mixed,_incl._dTDP_metabolic_process,_and_Helix_turn_helix,_Lux_Regulon


id: CL:3097
description: Mixed, incl. Porin activity, and Bacteriocin transport
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3097_Mixed,_incl._Porin_activity,_and_Bacteriocin_transport


id: CL:3098
description: Mixed, incl. Porin activity, and Bacteriocin transport
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3098_Mixed,_incl._Porin_activity,_and_Bacteriocin_transport


id: CL:3099
description: Mixed, incl. Outer membrane protein, bacterial, and Bacteriocin transport
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3099_Mixed,_incl._Outer_membrane_protein,_bacterial,_and_Bacteriocin_transport


id: CL:3101
description: Bacteriocin transport, and Thioesterase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3101_Bacteriocin_transport,_and_Thioesterase_superfamily


id: CL:3118
description: Mixed, incl. Protein stabilization, and Opacity family porin protein
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3118_Mixed,_incl._Protein_stabilization,_and_Opacity_family_porin_protein


id: CL:3129
description: Mixed, incl. tRNA nucleoside ribose methylation, and Pore complex
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3129_Mixed,_incl._tRNA_nucleoside_ribose_methylation,_and_Pore_complex


id: CL:3160
description: Mixed, incl. Cation/H+ exchanger, and Mechanosensitive ion channel
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3160_Mixed,_incl._Cation/H+_exchanger,_and_Mechanosensitive_ion_channel


id: CL:3172
description: Mixed, incl. Extracellular polysaccharide metabolic process, and Regulation of protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3172_Mixed,_incl._Extracellular_polysaccharide_metabolic_process,_and_Regulation_of_protein_transport


id: CL:3173
description: Mixed, incl. Extracellular polysaccharide metabolic process, and Regulation of protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3173_Mixed,_incl._Extracellular_polysaccharide_metabolic_process,_and_Regulation_of_protein_transport


id: CL:3174
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3174_Mostly_uncharacterized,_incl._Regulation_of_protein_transport,_and_tRNA_endonuclease-like_domain_superfamily

description:
  Mostly uncharacterized, incl. Regulation of protein transport, and tRNA endonuclease-like domain superfamily


id: CL:3177
description: Mixed, incl. Regulation of protein transport, and Amino acid kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3177_Mixed,_incl._Regulation_of_protein_transport,_and_Amino_acid_kinase_activity


id: CL:3199
description: Extracellular polysaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3199_Extracellular_polysaccharide_metabolic_process


id: CL:3212
description: Mixed, incl. Fusaric acid resistance protein family, and Biotin-lipoyl like
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3212_Mixed,_incl._Fusaric_acid_resistance_protein_family,_and_Biotin-lipoyl_like


id: CL:3227
description: Mixed, incl. Glutathione transferase activity, and L,D-transpeptidase catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3227_Mixed,_incl._Glutathione_transferase_activity,_and_L,D-transpeptidase_catalytic_domain


id: CL:3240
description: Mixed, incl. Acyl-CoA desaturase, and NUDIX domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3240_Mixed,_incl._Acyl-CoA_desaturase,_and_NUDIX_domain


id: CL:3241
description: Mixed, incl. Acyl-CoA desaturase, and Methyltransferase type 11
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3241_Mixed,_incl._Acyl-CoA_desaturase,_and_Methyltransferase_type_11


id: CL:3254
description: Mixed, incl. NUDIX domain, and DHHA1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3254_Mixed,_incl._NUDIX_domain,_and_DHHA1_domain


id: CL:3270
description: Mixed, incl. Capsule organization, and Prenyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3270_Mixed,_incl._Capsule_organization,_and_Prenyltransferase


id: CL:3272
description: Mixed, incl. Prenyltransferase, and Capsule organization
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3272_Mixed,_incl._Prenyltransferase,_and_Capsule_organization


id: CL:3287
description: Mixed, incl. L-gulonolactone/D-arabinono-1,4-lactone oxidase-like, and Alpha/beta hydrolase family
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3287_Mixed,_incl._L-gulonolactone/D-arabinono-1,4-lactone_oxidase-like,_and_Alpha/beta_hydrolase_family


id: CL:3300
description: Mixed, incl. Bacterial secretion system, and Type IV pilus-dependent motility
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3300_Mixed,_incl._Bacterial_secretion_system,_and_Type_IV_pilus-dependent_motility


id: CL:3302
description: Bacterial secretion system, and Type IV pilus-dependent motility
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3302_Bacterial_secretion_system,_and_Type_IV_pilus-dependent_motility


id: CL:3304
description: Mixed, incl. Protein transport across the cell outer membrane, and Pilus assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3304_Mixed,_incl._Protein_transport_across_the_cell_outer_membrane,_and_Pilus_assembly


id: CL:3305
description: Mixed, incl. Pilus assembly, and Fimbrium
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3305_Mixed,_incl._Pilus_assembly,_and_Fimbrium


id: CL:3307
description: Pilus assembly, and Type IV pilus-dependent motility
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3307_Pilus_assembly,_and_Type_IV_pilus-dependent_motility


id: CL:3351
description: Type II protein secretion system complex, and NolW-like
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3351_Type_II_protein_secretion_system_complex,_and_NolW-like


id: CL:3377
description: GlnD PII-uridylyltransferase, and Ammonia ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3377_GlnD_PII-uridylyltransferase,_and_Ammonia_ligase_activity


id: CL:3389
description: Mixed, incl. Proline biosynthesis, and Alanine racemase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3389_Mixed,_incl._Proline_biosynthesis,_and_Alanine_racemase,_N-terminal


id: CL:3410
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3410_Mostly_uncharacterized,_incl._beta-Lactam_resistance,_and_S-adenosyl-L-methionine-dependent_methyltransferase_superfamily

description:
  Mostly uncharacterized, incl. beta-Lactam resistance, and S-adenosyl-L-methionine-dependent methyltransferase superfamily


id: CL:3411
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3411_Mostly_uncharacterized,_incl._beta-Lactam_resistance,_and_S-adenosyl-L-methionine-dependent_methyltransferase_superfamily

description:
  Mostly uncharacterized, incl. beta-Lactam resistance, and S-adenosyl-L-methionine-dependent methyltransferase superfamily


id: CL:3412
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3412_Mostly_uncharacterized,_incl._beta-Lactam_resistance,_and_S-adenosyl-L-methionine-dependent_methyltransferase_superfamily

description:
  Mostly uncharacterized, incl. beta-Lactam resistance, and S-adenosyl-L-methionine-dependent methyltransferase superfamily


id: CL:3413
description: Mostly uncharacterized, incl. Extracellular region, and beta-Lactam resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3413_Mostly_uncharacterized,_incl._Extracellular_region,_and_beta-Lactam_resistance


id: CL:3414
description: Mostly uncharacterized, incl. Extracellular region, and beta-Lactam resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3414_Mostly_uncharacterized,_incl._Extracellular_region,_and_beta-Lactam_resistance


id: CL:3415
description: Mixed, incl. beta-Lactam resistance, and Extracellular region
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3415_Mixed,_incl._beta-Lactam_resistance,_and_Extracellular_region


id: CL:3416
description: Mostly uncharacterized, incl. IQ domain-containing protein IQM, and LysR, substrate-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3416_Mostly_uncharacterized,_incl._IQ_domain-containing_protein_IQM,_and_LysR,_substrate-binding


id: CL:3418
description: Mostly uncharacterized, incl. IQ domain-containing protein IQM, and LysR, substrate-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3418_Mostly_uncharacterized,_incl._IQ_domain-containing_protein_IQM,_and_LysR,_substrate-binding


id: CL:3420
description: Mostly uncharacterized, incl. IQ domain-containing protein IQM, and TauD/TfdA-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3420_Mostly_uncharacterized,_incl._IQ_domain-containing_protein_IQM,_and_TauD/TfdA-like_domain


id: CL:3422
description: Mostly uncharacterized, incl. TauD/TfdA-like domain, and Cobalamin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3422_Mostly_uncharacterized,_incl._TauD/TfdA-like_domain,_and_Cobalamin_metabolic_process


id: CL:3423
description: Mostly uncharacterized, incl. Lipase, GDSL, active site, and Histone deacetylase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3423_Mostly_uncharacterized,_incl._Lipase,_GDSL,_active_site,_and_Histone_deacetylase_domain


id: CL:3426
description: Mixed, incl. Lipase, GDSL, active site, and Histone deacetylase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3426_Mixed,_incl._Lipase,_GDSL,_active_site,_and_Histone_deacetylase_domain


id: CL:3430
description: Mixed, incl. Histone deacetylase domain, and L-gulonolactone/D-arabinono-1,4-lactone oxidase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3430_Mixed,_incl._Histone_deacetylase_domain,_and_L-gulonolactone/D-arabinono-1,4-lactone_oxidase-like


id: CL:3458
description: Mixed, incl. Taurine catabolism dioxygenase TauD, TfdA family, and Cobalamin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3458_Mixed,_incl._Taurine_catabolism_dioxygenase_TauD,_TfdA_family,_and_Cobalamin_metabolic_process


id: CL:3471
description: Mixed, incl. IQ domain-containing protein IQM, and Amine oxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3471_Mixed,_incl._IQ_domain-containing_protein_IQM,_and_Amine_oxidase


id: CL:3490
description: LysR, substrate-binding, and Sulfur amino acid transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3490_LysR,_substrate-binding,_and_Sulfur_amino_acid_transmembrane_transporter_activity


id: CL:3504
description: Mixed, incl. Siderophore metabolic process, and Protein TraM
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3504_Mixed,_incl._Siderophore_metabolic_process,_and_Protein_TraM


id: CL:3506
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3506_Siderophore_metabolic_process,_and_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity

description:
  Siderophore metabolic process, and CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity


id: CL:3516
description: Mixed, incl. Protein TraM, and Antibiotic resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3516_Mixed,_incl._Protein_TraM,_and_Antibiotic_resistance


id: CL:3525
description: Mixed, incl. Ketone catabolic process, and FAD binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3525_Mixed,_incl._Ketone_catabolic_process,_and_FAD_binding_domain


id: CL:3526
description: Mixed, incl. FAD binding domain , and Glycosidase
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3526_Mixed,_incl._FAD_binding_domain_,_and_Glycosidase


id: CL:3528
description: Mixed, incl. FAD binding domain , and Polyketide cyclase SnoaL-like
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3528_Mixed,_incl._FAD_binding_domain_,_and_Polyketide_cyclase_SnoaL-like


id: CL:353
description: Mixed, incl. Pseudouridine synthase activity, and DbpA RNA binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:353_Mixed,_incl._Pseudouridine_synthase_activity,_and_DbpA_RNA_binding_domain


id: CL:3549
description: Mixed, incl. Ketone catabolic process, and rRNA (adenine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3549_Mixed,_incl._Ketone_catabolic_process,_and_rRNA_(adenine)_methyltransferase_activity


id: CL:355
description: Mixed, incl. Pseudouridine synthase activity, and DbpA RNA binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:355_Mixed,_incl._Pseudouridine_synthase_activity,_and_DbpA_RNA_binding_domain


id: CL:3560
description: Mixed, incl. SGNH hydrolase superfamily, and Metalloprotease
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3560_Mixed,_incl._SGNH_hydrolase_superfamily,_and_Metalloprotease


id: CL:3563
description: Mixed, incl. Metalloprotease, and Thiol protease
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3563_Mixed,_incl._Metalloprotease,_and_Thiol_protease


id: CL:3565
description: Mixed, incl. Thiol protease, and Peptidase propeptide and YPEB domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3565_Mixed,_incl._Thiol_protease,_and_Peptidase_propeptide_and_YPEB_domain


id: CL:3577
description: Mixed, incl. Lipase, GDSL, active site, and Six-hairpin glycosidase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3577_Mixed,_incl._Lipase,_GDSL,_active_site,_and_Six-hairpin_glycosidase_superfamily


id: CL:3599
description: Mixed, incl. Peptidase S13, D-Ala-D-Ala carboxypeptidase C, and Glycoside hydrolase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3599_Mixed,_incl._Peptidase_S13,_D-Ala-D-Ala_carboxypeptidase_C,_and_Glycoside_hydrolase_superfamily


id: CL:3601
description: Mixed, incl. Peptidase S13, D-Ala-D-Ala carboxypeptidase C, and Glucan metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3601_Mixed,_incl._Peptidase_S13,_D-Ala-D-Ala_carboxypeptidase_C,_and_Glucan_metabolic_process


id: CL:3626
description: Mixed, incl. Beta-lactamase, and O-methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3626_Mixed,_incl._Beta-lactamase,_and_O-methyltransferase_domain


id: CL:3628
description: Mixed, incl. Beta-lactamase, and O-methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3628_Mixed,_incl._Beta-lactamase,_and_O-methyltransferase_domain


id: CL:3630
description: O-methyltransferase domain, and Nitrate assimilation
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3630_O-methyltransferase_domain,_and_Nitrate_assimilation


id: CL:3647
description: Beta-lactamase, and Pyridine-containing compound catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3647_Beta-lactamase,_and_Pyridine-containing_compound_catabolic_process


id: CL:3664
description: Mixed, incl. SnoaL-like domain, and Aminobenzoate degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3664_Mixed,_incl._SnoaL-like_domain,_and_Aminobenzoate_degradation


id: CL:3675
description: Mixed, incl. N-acetyltransferase activity, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3675_Mixed,_incl._N-acetyltransferase_activity,_and_AAA_domain


id: CL:3678
description: Mixed, incl. DJ-1/PfpI, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3678_Mixed,_incl._DJ-1/PfpI,_and_AAA_domain


id: CL:3696
description: Mixed, incl. Glycosyl transferase, family 1, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3696_Mixed,_incl._Glycosyl_transferase,_family_1,_and_Acetyltransferase_(GNAT)_domain


id: CL:3711
description: Mixed, incl. Glutathione hydrolase complex, and Histidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3711_Mixed,_incl._Glutathione_hydrolase_complex,_and_Histidine_metabolism


id: CL:3713
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3713_Mixed,_incl._Cytochrome_cd1-nitrite_reductase-like,_haem_d1_domain_superfamily,_and_Sulfuric_ester_hydrolase_activity

description:
  Mixed, incl. Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily, and Sulfuric ester hydrolase activity


id: CL:3735
description: Mixed, incl. FTP domain, and NTF2-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3735_Mixed,_incl._FTP_domain,_and_NTF2-like_domain_superfamily


id: CL:3736
description: Mixed, incl. FTP domain, and SnoaL-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3736_Mixed,_incl._FTP_domain,_and_SnoaL-like_domain


id: CL:3739
description: Mixed, incl. Hydroxyacylglutathione hydrolase activity, and Dienelactone hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3739_Mixed,_incl._Hydroxyacylglutathione_hydrolase_activity,_and_Dienelactone_hydrolase


id: CL:3757
description: Mixed, incl. SH2 domain superfamily, and Thioredoxin-like fold
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3757_Mixed,_incl._SH2_domain_superfamily,_and_Thioredoxin-like_fold


id: CL:376
description: Protein transport by the Sec complex, and SRP54-type protein, helical bundle domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:376_Protein_transport_by_the_Sec_complex,_and_SRP54-type_protein,_helical_bundle_domain


id: CL:3767
description: Mixed, incl. Spermidine synthase activity, and Uncharacterized ACR, COG1993
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3767_Mixed,_incl._Spermidine_synthase_activity,_and_Uncharacterized_ACR,_COG1993


id: CL:3769
description: Mixed, incl. Spermidine synthase activity, and Uncharacterized ACR, COG1993
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3769_Mixed,_incl._Spermidine_synthase_activity,_and_Uncharacterized_ACR,_COG1993


id: CL:3793
description: Mixed, incl. Protein maturation, and Ferredoxin hydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3793_Mixed,_incl._Protein_maturation,_and_Ferredoxin_hydrogenase_activity


id: CL:3796
description: Mixed, incl. Nickel cation binding, and ATPase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3796_Mixed,_incl._Nickel_cation_binding,_and_ATPase_complex


id: CL:3797
description: ATPase complex, and Nickel cation binding
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3797_ATPase_complex,_and_Nickel_cation_binding


id: CL:3808
description: Ferredoxin hydrogenase activity, and Alpha-helical ferredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3808_Ferredoxin_hydrogenase_activity,_and_Alpha-helical_ferredoxin


id: CL:3822
description: Peroxidase activity, and Ferric-uptake regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3822_Peroxidase_activity,_and_Ferric-uptake_regulator


id: CL:3836
description: Mixed, incl. Iron-sulfur cluster assembly, and Glutathione oxidoreductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3836_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Glutathione_oxidoreductase_activity


id: CL:3838
description: Mixed, incl. Iron-sulfur cluster assembly, and Glutaredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3838_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Glutaredoxin


id: CL:3840
description: Iron-sulfur cluster assembly, and Chaperone binding
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3840_Iron-sulfur_cluster_assembly,_and_Chaperone_binding


id: CL:3842
description: Iron-sulfur cluster assembly complex, and Cysteine desulfurase
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3842_Iron-sulfur_cluster_assembly_complex,_and_Cysteine_desulfurase


id: CL:3864
description: Mixed, incl. Glutaredoxin, and BolA protein
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3864_Mixed,_incl._Glutaredoxin,_and_BolA_protein


id: CL:3883
description: Mixed, incl. Base-excision repair, and Dicarboxylic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3883_Mixed,_incl._Base-excision_repair,_and_Dicarboxylic_acid_metabolic_process


id: CL:3884
description: Mixed, incl. Base-excision repair, and Major facilitator superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3884_Mixed,_incl._Base-excision_repair,_and_Major_facilitator_superfamily


id: CL:3886
description: Mixed, incl. Base-excision repair, and AP endonuclease 1
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3886_Mixed,_incl._Base-excision_repair,_and_AP_endonuclease_1


id: CL:3888
description: Mixed, incl. Carbon utilization, and NADPH-dependent FMN reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3888_Mixed,_incl._Carbon_utilization,_and_NADPH-dependent_FMN_reductase


id: CL:3920
description: Mixed, incl. Domain of unknown function DUF559, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3920_Mixed,_incl._Domain_of_unknown_function_DUF559,_and_4Fe-4S_binding_domain


id: CL:3931
description: Mixed, incl. Arginine metabolism, and ArgE/DapE/ACY1/CPG2/YscS, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3931_Mixed,_incl._Arginine_metabolism,_and_ArgE/DapE/ACY1/CPG2/YscS,_conserved_site


id: CL:3933
description: Mixed, incl. Arginine metabolism, and ArgE/DapE/ACY1/CPG2/YscS, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3933_Mixed,_incl._Arginine_metabolism,_and_ArgE/DapE/ACY1/CPG2/YscS,_conserved_site


id: CL:3935
description: Arginine metabolism, and ArgE/DapE/ACY1/CPG2/YscS, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3935_Arginine_metabolism,_and_ArgE/DapE/ACY1/CPG2/YscS,_conserved_site


id: CL:3959
description: Mixed, incl. Dipeptidase, and Regulation of response to stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3959_Mixed,_incl._Dipeptidase,_and_Regulation_of_response_to_stimulus


id: CL:3968
description: Mostly uncharacterized, incl. RES domain, and Antitoxin Xre/MbcA/ParS-like, toxin-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3968_Mostly_uncharacterized,_incl._RES_domain,_and_Antitoxin_Xre/MbcA/ParS-like,_toxin-binding_domain


id: CL:3969
description: Mixed, incl. RES domain, and Antitoxin Xre/MbcA/ParS-like, toxin-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3969_Mixed,_incl._RES_domain,_and_Antitoxin_Xre/MbcA/ParS-like,_toxin-binding_domain


id: CL:397
description: Aminoacyl-tRNA synthetase, class I, conserved site, and phenylalanyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:397_Aminoacyl-tRNA_synthetase,_class_I,_conserved_site,_and_phenylalanyl-tRNA_aminoacylation


id: CL:3970
description: Mixed, incl. RES domain, and Antitoxin Xre/MbcA/ParS-like, toxin-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3970_Mixed,_incl._RES_domain,_and_Antitoxin_Xre/MbcA/ParS-like,_toxin-binding_domain


id: CL:3972
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3972_Mixed,_incl._PD-(D/E)XK_endonuclease-like_domain_superfamily,_and_NAD-dependent_epimerase/dehydratase

description:
  Mixed, incl. PD-(D/E)XK endonuclease-like domain superfamily, and NAD-dependent epimerase/dehydratase


id: CL:3973
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3973_Mixed,_incl._PD-(D/E)XK_endonuclease-like_domain_superfamily,_and_NAD-dependent_epimerase/dehydratase

description:
  Mixed, incl. PD-(D/E)XK endonuclease-like domain superfamily, and NAD-dependent epimerase/dehydratase


id: CL:3986
description: Mixed, incl. RES domain, and Antitoxin Xre/MbcA/ParS-like, toxin-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3986_Mixed,_incl._RES_domain,_and_Antitoxin_Xre/MbcA/ParS-like,_toxin-binding_domain


id: CL:3997
description: RES domain, and Antitoxin Xre/MbcA/ParS-like, toxin-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:3997_RES_domain,_and_Antitoxin_Xre/MbcA/ParS-like,_toxin-binding_domain


id: CL:400
description: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:400_Aminoacyl-tRNA_synthetase,_class_Ia,_anticodon-binding


id: CL:4010
description: Mixed, incl. Amine oxidase, and Response to light stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4010_Mixed,_incl._Amine_oxidase,_and_Response_to_light_stimulus


id: CL:4026
description: Mixed, incl. AAA domain, and Pyridine nucleotide-disulphide oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4026_Mixed,_incl._AAA_domain,_and_Pyridine_nucleotide-disulphide_oxidoreductase


id: CL:4035
description: Mixed, incl. BON domain, and MamQ/LemA
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4035_Mixed,_incl._BON_domain,_and_MamQ/LemA


id: CL:4037
description: Mixed, incl. BON domain, and MamQ/LemA
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4037_Mixed,_incl._BON_domain,_and_MamQ/LemA


id: CL:4063
description: Mixed, incl. MamQ/LemA, and Peptidase M48
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4063_Mixed,_incl._MamQ/LemA,_and_Peptidase_M48


id: CL:4079
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4079_Mixed,_incl._Lytic_transglycosylase_activity,_and_AmpG-like_permease/Acetyl-coenzyme_A_transporter_1

description:
  Mixed, incl. Lytic transglycosylase activity, and AmpG-like permease/Acetyl-coenzyme A transporter 1


id: CL:4090
description: Mixed, incl. Tyrosine metabolism, and Diol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4090_Mixed,_incl._Tyrosine_metabolism,_and_Diol_metabolic_process


id: CL:4093
description: Tyrosine metabolic process, and Cytolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4093_Tyrosine_metabolic_process,_and_Cytolysis


id: CL:4114
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4114_Mostly_uncharacterized,_incl._HTH-type_transcriptional_regulator_YidZ,_PBP2_domain,_and_Homeobox-like_domain_superfamily

description:
  Mostly uncharacterized, incl. HTH-type transcriptional regulator YidZ, PBP2 domain, and Homeobox-like domain superfamily


id: CL:4117
description: Mixed, incl. Fatty acid hydroxylase, and Alkane catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4117_Mixed,_incl._Fatty_acid_hydroxylase,_and_Alkane_catabolic_process


id: CL:4119
description: Mixed, incl. Fatty acid hydroxylase, and Alkane catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4119_Mixed,_incl._Fatty_acid_hydroxylase,_and_Alkane_catabolic_process


id: CL:4143
description: Mixed, incl. Phospholipase activity, and Nucleobase-containing compound transport
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4143_Mixed,_incl._Phospholipase_activity,_and_Nucleobase-containing_compound_transport


id: CL:416
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:416_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity,_and_Aspartyl/Asparaginyl-tRNA_synthetase,_class_IIb

description:
  glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, and Aspartyl/Asparaginyl-tRNA synthetase, class IIb


id: CL:4162
description: Mixed, incl. Prokaryotic cytochrome b561, and YceI-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4162_Mixed,_incl._Prokaryotic_cytochrome_b561,_and_YceI-like_domain


id: CL:4163
description: Mixed, incl. Prokaryotic cytochrome b561, and YceI-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4163_Mixed,_incl._Prokaryotic_cytochrome_b561,_and_YceI-like_domain


id: CL:4164
description: Mixed, incl. DUF34/NIF3 superfamily, and Glutamate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4164_Mixed,_incl._DUF34/NIF3_superfamily,_and_Glutamate_catabolic_process


id: CL:4166
description: Mixed, incl. DUF34/NIF3 superfamily, and CDP-alcohol phosphatidyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4166_Mixed,_incl._DUF34/NIF3_superfamily,_and_CDP-alcohol_phosphatidyltransferase


id: CL:4183
description: YceI-like domain, and Prokaryotic cytochrome b561
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4183_YceI-like_domain,_and_Prokaryotic_cytochrome_b561


id: CL:4194
description: Mixed, incl. Transglycosylase SLT domain, and Sugar (and other) transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4194_Mixed,_incl._Transglycosylase_SLT_domain,_and_Sugar_(and_other)_transporter


id: CL:4228
description: Mixed, incl. Transmembrane transport, and Lipoprotein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4228_Mixed,_incl._Transmembrane_transport,_and_Lipoprotein_transport


id: CL:4229
description: Mixed, incl. Transporter activity, and Lipoprotein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4229_Mixed,_incl._Transporter_activity,_and_Lipoprotein_transport


id: CL:4231
description: Transporter activity, and Lipoprotein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4231_Transporter_activity,_and_Lipoprotein_transport


id: CL:4232
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4232_Mixed,_incl._beta-Lactam_resistance,_and_RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain

description:
  Mixed, incl. beta-Lactam resistance, and RND efflux pump, membrane fusion protein, barrel-sandwich domain


id: CL:4233
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4233_Mixed,_incl._Efflux_transmembrane_transporter_activity,_and_Multidrug_efflux_transporter_AcrB_TolC_docking_domain,_DN/DC_subdomains

description:
  Mixed, incl. Efflux transmembrane transporter activity, and Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains


id: CL:4234
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4234_Mixed,_incl._Multidrug_efflux_transporter_AcrB_TolC_docking_domain,_DN/DC_subdomains,_and_Efflux_transmembrane_transporter_activity

description:
  Mixed, incl. Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains, and Efflux transmembrane transporter activity


id: CL:4235
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4235_Mixed,_incl._Multidrug_efflux_transporter_AcrB_TolC_docking_domain,_DN/DC_subdomains,_and_RND_efflux_pump,_membrane_fusion_protein

description:
  Mixed, incl. Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains, and RND efflux pump, membrane fusion protein


id: CL:4236
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4236_Mixed,_incl._Multidrug_efflux_transporter_AcrB_TolC_docking_domain,_DN/DC_subdomains,_and_RND_efflux_pump,_membrane_fusion_protein

description:
  Mixed, incl. Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains, and RND efflux pump, membrane fusion protein


id: CL:4237
description: RND efflux pump, membrane fusion protein, and Xenobiotic transport
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4237_RND_efflux_pump,_membrane_fusion_protein,_and_Xenobiotic_transport


id: CL:4238
description: Xenobiotic transport, and Efflux pump complex
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4238_Xenobiotic_transport,_and_Efflux_pump_complex


id: CL:4240
description: Efflux pump complex, and Xenobiotic transport
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4240_Efflux_pump_complex,_and_Xenobiotic_transport


id: CL:4257
description: Mixed, incl. Protein of unknown function DUF4156, and Cation efflux system protein CusB, domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4257_Mixed,_incl._Protein_of_unknown_function_DUF4156,_and_Cation_efflux_system_protein_CusB,_domain_1


id: CL:4266
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4266_Mixed,_incl._Cation_efflux_system_CzcA/CusA/SilA/NccA/HelA/CnrA,_and_Copper_binding_periplasmic_protein_CusF

description:
  Mixed, incl. Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA, and Copper binding periplasmic protein CusF


id: CL:4267
description: Mixed, incl. AcrB/AcrD/AcrF family, and Copper binding periplasmic protein CusF
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4267_Mixed,_incl._AcrB/AcrD/AcrF_family,_and_Copper_binding_periplasmic_protein_CusF


id: CL:4279
description: Mixed, incl. Ion channel, and Protein of unknown function DUF4156
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4279_Mixed,_incl._Ion_channel,_and_Protein_of_unknown_function_DUF4156


id: CL:4291
description: Mixed, incl. Cation-transporting P-type ATPase, N-terminal, and Ribose-phosphate pyrophosphokinase
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4291_Mixed,_incl._Cation-transporting_P-type_ATPase,_N-terminal,_and_Ribose-phosphate_pyrophosphokinase


id: CL:4305
description: Mixed, incl. AcrB/AcrD/AcrF family, and Outer membrane efflux protein
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4305_Mixed,_incl._AcrB/AcrD/AcrF_family,_and_Outer_membrane_efflux_protein


id: CL:4317
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4317_Mixed,_incl._Outer_membrane_efflux_protein,_and_RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain

description:
  Mixed, incl. Outer membrane efflux protein, and RND efflux pump, membrane fusion protein, barrel-sandwich domain


id: CL:4319
description: Mixed, incl. NADPH-dependent FMN reductase, and Cation efflux system protein CusB, domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4319_Mixed,_incl._NADPH-dependent_FMN_reductase,_and_Cation_efflux_system_protein_CusB,_domain_1


id: CL:4336
description: Mixed, incl. Nucleoplasm, and Citrate transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4336_Mixed,_incl._Nucleoplasm,_and_Citrate_transporter


id: CL:4350
description: Mixed, incl. Lipoprotein transport, and Ubiquinone biosynthesis hydroxylase UbiH/COQ6
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4350_Mixed,_incl._Lipoprotein_transport,_and_Ubiquinone_biosynthesis_hydroxylase_UbiH/COQ6


id: CL:4351
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4351_Mixed,_incl._Ubiquinone_biosynthesis_hydroxylase_UbiH/COQ6,_and_Peptidase_M24,_methionine_aminopeptidase

description:
  Mixed, incl. Ubiquinone biosynthesis hydroxylase UbiH/COQ6, and Peptidase M24, methionine aminopeptidase


id: CL:4352
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4352_Mixed,_incl._Ubiquinone_biosynthesis_hydroxylase_UbiH/COQ6,_and_Peptidase_M24,_methionine_aminopeptidase

description:
  Mixed, incl. Ubiquinone biosynthesis hydroxylase UbiH/COQ6, and Peptidase M24, methionine aminopeptidase


id: CL:4363
description: Mixed, incl. MacB-like periplasmic core domain, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4363_Mixed,_incl._MacB-like_periplasmic_core_domain,_and_MacB,_ATP-binding_domain


id: CL:4387
description: Mixed, incl. Type 1 protein exporter, and Type I secretion membrane fusion protein, HlyD family
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4387_Mixed,_incl._Type_1_protein_exporter,_and_Type_I_secretion_membrane_fusion_protein,_HlyD_family


id: CL:4389
description: Mixed, incl. Type 1 protein exporter, and Type I secretion membrane fusion protein, HlyD family
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4389_Mixed,_incl._Type_1_protein_exporter,_and_Type_I_secretion_membrane_fusion_protein,_HlyD_family


id: CL:439
description: Mixed, incl. Methyltransferase HemK-like, and Peptide chain release factor
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:439_Mixed,_incl._Methyltransferase_HemK-like,_and_Peptide_chain_release_factor


id: CL:4390
description: Mixed, incl. Type 1 protein exporter, and Type I secretion membrane fusion protein, HlyD family
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4390_Mixed,_incl._Type_1_protein_exporter,_and_Type_I_secretion_membrane_fusion_protein,_HlyD_family


id: CL:4391
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4391_Mixed,_incl._Type_I_secretion_membrane_fusion_protein,_HlyD_family,_and_Type_I_secretion_outer_membrane_protein,_TolC

description:
  Mixed, incl. Type I secretion membrane fusion protein, HlyD family, and Type I secretion outer membrane protein, TolC


id: CL:4402
description: Type 1 protein exporter, and Biotin-lipoyl like
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4402_Type_1_protein_exporter,_and_Biotin-lipoyl_like


id: CL:4411
description: Mixed, incl. Photosynthesis - antenna proteins, and Peptidase C39, bacteriocin processing
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4411_Mixed,_incl._Photosynthesis_-_antenna_proteins,_and_Peptidase_C39,_bacteriocin_processing


id: CL:4444
description: Mixed, incl. ATP-binding cassette (ABC) transporter complex, and MetI-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4444_Mixed,_incl._ATP-binding_cassette_(ABC)_transporter_complex,_and_MetI-like_superfamily


id: CL:4445
description: Mixed, incl. ATP-binding cassette (ABC) transporter complex, and MetI-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4445_Mixed,_incl._ATP-binding_cassette_(ABC)_transporter_complex,_and_MetI-like_superfamily


id: CL:4446
description: Mixed, incl. ATP-binding cassette (ABC) transporter complex, and Organic cation transport
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4446_Mixed,_incl._ATP-binding_cassette_(ABC)_transporter_complex,_and_Organic_cation_transport


id: CL:4447
description: Mixed, incl. ATP-binding cassette (ABC) transporter complex, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4447_Mixed,_incl._ATP-binding_cassette_(ABC)_transporter_complex,_and_Methyltransferase_domain


id: CL:4448
description: Mixed, incl. ABC-2 transporter, and Palmitate
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4448_Mixed,_incl._ABC-2_transporter,_and_Palmitate


id: CL:4450
description: ABC-2 family transporter protein, and Palmitate
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4450_ABC-2_family_transporter_protein,_and_Palmitate


id: CL:4471
description: Mixed, incl. Methyltransferase domain, and Zinc ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4471_Mixed,_incl._Methyltransferase_domain,_and_Zinc_ion_transport


id: CL:4481
description: Organic cation transport, and Protein-tyrosine phosphatase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4481_Organic_cation_transport,_and_Protein-tyrosine_phosphatase-like


id: CL:4493
description: Mixed, incl. MetI-like superfamily, and TOBE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4493_Mixed,_incl._MetI-like_superfamily,_and_TOBE_domain


id: CL:4494
description: Mixed, incl. MetI-like superfamily, and TOBE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4494_Mixed,_incl._MetI-like_superfamily,_and_TOBE_domain


id: CL:4496
description: Mixed, incl. MetI-like superfamily, and TOBE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4496_Mixed,_incl._MetI-like_superfamily,_and_TOBE_domain


id: CL:4519
description: Mixed, incl. Type-IV b secretion system, inner-membrane complex component, and Ankyrin repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4519_Mixed,_incl._Type-IV_b_secretion_system,_inner-membrane_complex_component,_and_Ankyrin_repeats


id: CL:4530
description: Mixed, incl. Latent infection - Other responses of Mtb to phagocytosis, and LysR, substrate-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4530_Mixed,_incl._Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis,_and_LysR,_substrate-binding


id: CL:4532
description: Mixed, incl. MetI-like superfamily, and Solute-binding protein family 5
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4532_Mixed,_incl._MetI-like_superfamily,_and_Solute-binding_protein_family_5


id: CL:4548
description: Mixed, incl. LysR, substrate-binding, and ATPase-coupled lipid transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4548_Mixed,_incl._LysR,_substrate-binding,_and_ATPase-coupled_lipid_transmembrane_transporter_activity


id: CL:4559
description: Mixed, incl. Major facilitator superfamily, and Nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4559_Mixed,_incl._Major_facilitator_superfamily,_and_Nucleoid


id: CL:4560
description: Mixed, incl. Major facilitator superfamily, and Nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4560_Mixed,_incl._Major_facilitator_superfamily,_and_Nucleoid


id: CL:4561
description: Mixed, incl. Major facilitator superfamily, and Bacterial nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4561_Mixed,_incl._Major_facilitator_superfamily,_and_Bacterial_nucleoid


id: CL:4563
description: Major facilitator superfamily, and Cellular response to pH
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4563_Major_facilitator_superfamily,_and_Cellular_response_to_pH


id: CL:4565
description: Major facilitator superfamily, and Cellular response to pH
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4565_Major_facilitator_superfamily,_and_Cellular_response_to_pH


id: CL:4593
description: Mixed, incl. Bacterial nucleoid, and Sulfatase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4593_Mixed,_incl._Bacterial_nucleoid,_and_Sulfatase,_N-terminal


id: CL:4604
description: Mixed, incl. Chromatin, and DUS-like, FMN-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4604_Mixed,_incl._Chromatin,_and_DUS-like,_FMN-binding_domain


id: CL:4618
description: Mixed, incl. Long-chain fatty acid transporting porin activity, and RimK-like ATP-grasp domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4618_Mixed,_incl._Long-chain_fatty_acid_transporting_porin_activity,_and_RimK-like_ATP-grasp_domain


id: CL:4619
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4619_Mixed,_incl._Long-chain_fatty_acid_transporting_porin_activity,_and_Branched-chain_amino_acid_transport

description:
  Mixed, incl. Long-chain fatty acid transporting porin activity, and Branched-chain amino acid transport


id: CL:4622
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4622_Mixed,_incl._Aspartic_peptidase_domain_superfamily,_and_Alpha-L-glutamate_ligase-related_protein,_ATP-grasp_domain

description:
  Mixed, incl. Aspartic peptidase domain superfamily, and Alpha-L-glutamate ligase-related protein, ATP-grasp domain


id: CL:4638
description: Mixed, incl. Thioesterase domain, and ATP-grasp fold, RimK-type
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4638_Mixed,_incl._Thioesterase_domain,_and_ATP-grasp_fold,_RimK-type


id: CL:4656
description: Mixed, incl. Sel1-like repeat, and Response to heat
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4656_Mixed,_incl._Sel1-like_repeat,_and_Response_to_heat


id: CL:4657
description: Sel1-like repeat, and Response to heat
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4657_Sel1-like_repeat,_and_Response_to_heat


id: CL:4683
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4683_Mixed,_incl._Inorganic_anion_transmembrane_transporter_activity,_and_Phosphotransferase_activity,_phosphate_group_as_acceptor

description:
  Mixed, incl. Inorganic anion transmembrane transporter activity, and Phosphotransferase activity, phosphate group as acceptor


id: CL:4692
description: Mixed, incl. LysR, substrate-binding, and Sel1-like repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4692_Mixed,_incl._LysR,_substrate-binding,_and_Sel1-like_repeat


id: CL:4703
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4703_Mostly_uncharacterized,_incl._Secretion_by_the_type_IV_secretion_system,_and_Integrase,_catalytic_domain

description:
  Mostly uncharacterized, incl. Secretion by the type IV secretion system, and Integrase, catalytic domain


id: CL:4704
description: Mixed, incl. Secretion by the type IV secretion system, and Integrase, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4704_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_Integrase,_catalytic_domain


id: CL:4705
description: Mixed, incl. Secretion by the type IV secretion system, and Integrase, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4705_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_Integrase,_catalytic_domain


id: CL:4706
description: Mixed, incl. Secretion by the type IV secretion system, and Integrase, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4706_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_Integrase,_catalytic_domain


id: CL:4707
description: Mixed, incl. Secretion by the type IV secretion system, and Quorum sensing
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4707_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_Quorum_sensing


id: CL:4708
description: Mixed, incl. Secretion by the type IV secretion system, and Quorum sensing
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4708_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_Quorum_sensing


id: CL:471
description: Mixed, incl. RelA/SpoT, and Aspartic peptidase domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:471_Mixed,_incl._RelA/SpoT,_and_Aspartic_peptidase_domain_superfamily


id: CL:4710
description: Mixed, incl. Secretion by the type IV secretion system, and Quorum sensing
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4710_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_Quorum_sensing


id: CL:4711
description: Mixed, incl. Secretion by the type IV secretion system, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4711_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_Response_to_virus


id: CL:4712
description: Mixed, incl. Secretion by the type IV secretion system, and Endonuclease relaxase, MobA/VirD2
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4712_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_Endonuclease_relaxase,_MobA/VirD2


id: CL:4714
description: Mixed, incl. Secretion by the type IV secretion system, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4714_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_Response_to_virus


id: CL:4716
description: Mixed, incl. Response to virus, and Conjugal transfer protein TrbF
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4716_Mixed,_incl._Response_to_virus,_and_Conjugal_transfer_protein_TrbF


id: CL:4744
description: Mixed, incl. Secretion by the type IV secretion system, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4744_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_Response_to_virus


id: CL:4746
description: Mixed, incl. Secretion by the type IV secretion system, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4746_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_Response_to_virus


id: CL:4749
description: Mixed, incl. Response to virus, and Conjugal transfer protein TrbF
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4749_Mixed,_incl._Response_to_virus,_and_Conjugal_transfer_protein_TrbF


id: CL:4775
description: Mixed, incl. Conjugal transfer, TrbH, and Type IV conjugative transfer protein TrbJ
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4775_Mixed,_incl._Conjugal_transfer,_TrbH,_and_Type_IV_conjugative_transfer_protein_TrbJ


id: CL:4793
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4793_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_CagE,_TrbE,_VirB_component_of_type_IV_transporter_system

description:
  Mixed, incl. Secretion by the type IV secretion system, and CagE, TrbE, VirB component of type IV transporter system


id: CL:4796
description: Secretion by the type IV secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4796_Secretion_by_the_type_IV_secretion_system


id: CL:4817
description: Mixed, incl. Calcium ion transport, and Fatty acid hydroxylase
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4817_Mixed,_incl._Calcium_ion_transport,_and_Fatty_acid_hydroxylase


id: CL:4830
description: Integrase, catalytic domain, and Fido domain-containing protein
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4830_Integrase,_catalytic_domain,_and_Fido_domain-containing_protein


id: CL:4833
description: Integrase, DNA-binding domain, and Pfam phage integrase family
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4833_Integrase,_DNA-binding_domain,_and_Pfam_phage_integrase_family


id: CL:4853
description: Mixed, incl. Putative DNA-binding domain, and Xylose isomerase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4853_Mixed,_incl._Putative_DNA-binding_domain,_and_Xylose_isomerase-like_superfamily


id: CL:4855
description: Mixed, incl. Putative DNA-binding domain, and Xylose isomerase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4855_Mixed,_incl._Putative_DNA-binding_domain,_and_Xylose_isomerase-like_superfamily


id: CL:487
description: Protein folding, and Proteolysis involved in protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:487_Protein_folding,_and_Proteolysis_involved_in_protein_catabolic_process


id: CL:4875
description: Mixed, incl. Lipid-binding, and Sister chromatid cohesion
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4875_Mixed,_incl._Lipid-binding,_and_Sister_chromatid_cohesion


id: CL:4884
description: Mixed, incl. UTP catabolic process, and Carbon-nitrogen hydrolase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4884_Mixed,_incl._UTP_catabolic_process,_and_Carbon-nitrogen_hydrolase_superfamily


id: CL:4893
description: Mixed, incl. Patatin-like phospholipase, and Iron ion homeostasis
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4893_Mixed,_incl._Patatin-like_phospholipase,_and_Iron_ion_homeostasis


id: CL:4895
description: Mixed, incl. Patatin-like phospholipase, and 3-tRNA processing endoribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4895_Mixed,_incl._Patatin-like_phospholipase,_and_3-tRNA_processing_endoribonuclease_activity


id: CL:490
description: Protein folding chaperone, and Chaperone binding
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:490_Protein_folding_chaperone,_and_Chaperone_binding


id: CL:4914
description: Iron ion homeostasis, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4914_Iron_ion_homeostasis,_and_Cell_division_site


id: CL:4924
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4924_Mixed,_incl._Protein_secretion,_and_Biological_process_involved_in_interspecies_interaction_between_organisms

description:
  Mixed, incl. Protein secretion, and Biological process involved in interspecies interaction between organisms


id: CL:4925
description: Protein secretion, and Biological process involved in interspecies interaction between organisms
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4925_Protein_secretion,_and_Biological_process_involved_in_interspecies_interaction_between_organisms


id: CL:4952
description: Mixed, incl. Pentapeptide repeats (9 copies), and Cytolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4952_Mixed,_incl._Pentapeptide_repeats_(9_copies),_and_Cytolysis


id: CL:4963
description: TAM protein secretion complex, and Glucan metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4963_TAM_protein_secretion_complex,_and_Glucan_metabolic_process


id: CL:4980
description: Mostly uncharacterized, incl. Redoxin, and Protein of unknown function DUF2845
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4980_Mostly_uncharacterized,_incl._Redoxin,_and_Protein_of_unknown_function_DUF2845


id: CL:4982
description: Mixed, incl. Redoxin, and Protein of unknown function DUF2845
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4982_Mixed,_incl._Redoxin,_and_Protein_of_unknown_function_DUF2845


id: CL:4994
description: Mixed, incl. Queuosine salvage, and Cation efflux family
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:4994_Mixed,_incl._Queuosine_salvage,_and_Cation_efflux_family


id: CL:5004
description: Mostly uncharacterized, incl. Peroxidase activity, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5004_Mostly_uncharacterized,_incl._Peroxidase_activity,_and_AAA_domain


id: CL:5006
description: Mixed, incl. Antibiotic resistance, and Helix_turn_helix, Lux Regulon
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5006_Mixed,_incl._Antibiotic_resistance,_and_Helix_turn_helix,_Lux_Regulon


id: CL:5025
description: Mixed, incl. AAA domain, and Thioredoxin peroxidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5025_Mixed,_incl._AAA_domain,_and_Thioredoxin_peroxidase_activity


id: CL:5040
description: Mixed, incl. Quorum sensing, and Amide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5040_Mixed,_incl._Quorum_sensing,_and_Amide_transport


id: CL:5041
description: Mostly uncharacterized, incl. Amino acid permease, and Amide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5041_Mostly_uncharacterized,_incl._Amino_acid_permease,_and_Amide_transport


id: CL:5042
description: Mixed, incl. Amino acid permease, and Amide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5042_Mixed,_incl._Amino_acid_permease,_and_Amide_transport


id: CL:5044
description: Mixed, incl. Amino acid permease, and Amide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5044_Mixed,_incl._Amino_acid_permease,_and_Amide_transport


id: CL:5045
description: Mixed, incl. Amino acid/polyamine transporter I, and Amide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5045_Mixed,_incl._Amino_acid/polyamine_transporter_I,_and_Amide_transport


id: CL:5047
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5047_Mixed,_incl._Amino_acid/polyamine_transporter_I,_and_Linear_amide_C-N_hydrolases,_choloylglycine_hydrolase_family

description:
  Mixed, incl. Amino acid/polyamine transporter I, and Linear amide C-N hydrolases, choloylglycine hydrolase family


id: CL:5049
description: Mixed, incl. Amino acid/polyamine transporter I, and Amino acid permease/ SLC12A domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5049_Mixed,_incl._Amino_acid/polyamine_transporter_I,_and_Amino_acid_permease/_SLC12A_domain


id: CL:5051
description: Amino acid/polyamine transporter I, and Glycoside hydrolase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5051_Amino_acid/polyamine_transporter_I,_and_Glycoside_hydrolase_superfamily


id: CL:5053
description: Amino acid permease, and Glycoside hydrolase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5053_Amino_acid_permease,_and_Glycoside_hydrolase_superfamily


id: CL:5083
description: Mixed, incl. Linear amide C-N hydrolases, choloylglycine hydrolase family, and Response to pH
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5083_Mixed,_incl._Linear_amide_C-N_hydrolases,_choloylglycine_hydrolase_family,_and_Response_to_pH


id: CL:5109
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5109_Mixed,_incl._Anion_channel_activity,_and_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Mixed, incl. Anion channel activity, and Oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor


id: CL:5128
description: Mixed, incl. JmjC domain, and Dipeptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5128_Mixed,_incl._JmjC_domain,_and_Dipeptide_transport


id: CL:5145
description: Mixed, incl. His-Me finger superfamily, and Domain of unknown function DUF927
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5145_Mixed,_incl._His-Me_finger_superfamily,_and_Domain_of_unknown_function_DUF927


id: CL:5147
description: Mixed, incl. His-Me finger superfamily, and Ammonia-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5147_Mixed,_incl._His-Me_finger_superfamily,_and_Ammonia-lyase_activity


id: CL:5149
description: Mixed, incl. His-Me finger superfamily, and Ammonia-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5149_Mixed,_incl._His-Me_finger_superfamily,_and_Ammonia-lyase_activity


id: CL:5165
description: Mixed, incl. Toxin-antitoxin system, RelE/ParE toxin domain superfamily, and Endonuclease I
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5165_Mixed,_incl._Toxin-antitoxin_system,_RelE/ParE_toxin_domain_superfamily,_and_Endonuclease_I


id: CL:5181
description: Mixed, incl. Nucleotidyltransferase domain, and Pentapeptide repeats (8 copies)
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5181_Mixed,_incl._Nucleotidyltransferase_domain,_and_Pentapeptide_repeats_(8_copies)


id: CL:5192
description: Mixed, incl. Antibiotic biosynthesis monooxygenase, and Ion channel
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5192_Mixed,_incl._Antibiotic_biosynthesis_monooxygenase,_and_Ion_channel


id: CL:5194
description: Antibiotic biosynthesis monooxygenase, and Ion channel
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5194_Antibiotic_biosynthesis_monooxygenase,_and_Ion_channel


id: CL:5215
description: Mixed, incl. HIT domain, and Protein of unknown function DUF4442
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5215_Mixed,_incl._HIT_domain,_and_Protein_of_unknown_function_DUF4442


id: CL:5230
description: Mostly uncharacterized, incl. Potassium ion transport, and Phosphate transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5230_Mostly_uncharacterized,_incl._Potassium_ion_transport,_and_Phosphate_transporter


id: CL:5231
description: Mixed, incl. Citrate transporter-like domain, and Calcium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5231_Mixed,_incl._Citrate_transporter-like_domain,_and_Calcium_ion_transport


id: CL:5233
description: Mixed, incl. Citrate transporter-like domain, and Calcium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5233_Mixed,_incl._Citrate_transporter-like_domain,_and_Calcium_ion_transport


id: CL:5235
description: Mixed, incl. Sodium/sulphate symporter, conserved site, and ATP-grasp fold, RimK-type
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5235_Mixed,_incl._Sodium/sulphate_symporter,_conserved_site,_and_ATP-grasp_fold,_RimK-type


id: CL:5264
description: Mixed, incl. Phosphate transporter, and Sulfatase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5264_Mixed,_incl._Phosphate_transporter,_and_Sulfatase,_N-terminal


id: CL:5266
description: Mixed, incl. Sulfatase, N-terminal, and Phosphate transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5266_Mixed,_incl._Sulfatase,_N-terminal,_and_Phosphate_transporter


id: CL:5291
description: Mixed, incl. Sporulation, and Legionella pneumophila major outer membrane protein precursor
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5291_Mixed,_incl._Sporulation,_and_Legionella_pneumophila_major_outer_membrane_protein_precursor


id: CL:5294
description: Mixed, incl. NodB homology domain, and Leucine-rich repeat domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5294_Mixed,_incl._NodB_homology_domain,_and_Leucine-rich_repeat_domain_superfamily


id: CL:5317
description: Mixed, incl. Integrase, SAM-like, N-terminal, and Queuosine salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5317_Mixed,_incl._Integrase,_SAM-like,_N-terminal,_and_Queuosine_salvage


id: CL:532
description: Mixed, incl. ParB/Sulfiredoxin, and Protein carrier chaperone
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:532_Mixed,_incl._ParB/Sulfiredoxin,_and_Protein_carrier_chaperone


id: CL:5331
description: Mixed, incl. DNA binding, and HipA-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5331_Mixed,_incl._DNA_binding,_and_HipA-like,_C-terminal


id: CL:5332
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5332_Mostly_uncharacterized,_incl._Lambda_repressor-like,_DNA-binding_domain_superfamily,_and_HipA-like,_C-terminal

description:
  Mostly uncharacterized, incl. Lambda repressor-like, DNA-binding domain superfamily, and HipA-like, C-terminal


id: CL:5333
description: Mixed, incl. Lambda repressor-like, DNA-binding domain superfamily, and HipA-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5333_Mixed,_incl._Lambda_repressor-like,_DNA-binding_domain_superfamily,_and_HipA-like,_C-terminal


id: CL:5334
description: Mixed, incl. Lambda repressor-like, DNA-binding domain superfamily, and HipA-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5334_Mixed,_incl._Lambda_repressor-like,_DNA-binding_domain_superfamily,_and_HipA-like,_C-terminal


id: CL:5335
description: Mixed, incl. HipA-like, C-terminal, and Cro/C1-type helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5335_Mixed,_incl._HipA-like,_C-terminal,_and_Cro/C1-type_helix-turn-helix_domain


id: CL:5337
description: Mixed, incl. HipA-like, C-terminal, and Cro/C1-type helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5337_Mixed,_incl._HipA-like,_C-terminal,_and_Cro/C1-type_helix-turn-helix_domain


id: CL:5339
description: HipA-like, C-terminal, and Cro/C1-type helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5339_HipA-like,_C-terminal,_and_Cro/C1-type_helix-turn-helix_domain


id: CL:534
description: Protein carrier chaperone, and NADH:flavin oxidoreductase / NADH oxidase family
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:534_Protein_carrier_chaperone,_and_NADH:flavin_oxidoreductase_/_NADH_oxidase_family


id: CL:5341
description: Mixed, incl. HipA-like, C-terminal, and Transcription regulator, HipB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5341_Mixed,_incl._HipA-like,_C-terminal,_and_Transcription_regulator,_HipB-like


id: CL:5343
description: HipA-like, C-terminal, and Transcription regulator, HipB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5343_HipA-like,_C-terminal,_and_Transcription_regulator,_HipB-like


id: CL:5345
description: HipA-like, C-terminal, and Transcription regulator, HipB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5345_HipA-like,_C-terminal,_and_Transcription_regulator,_HipB-like


id: CL:5397
description: Mixed, incl. DNA modification, and Toxin-antitoxin complex
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5397_Mixed,_incl._DNA_modification,_and_Toxin-antitoxin_complex


id: CL:5400
description: Mixed, incl. DNA restriction-modification system, and DNA methylation on adenine
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5400_Mixed,_incl._DNA_restriction-modification_system,_and_DNA_methylation_on_adenine


id: CL:5415
description: Toxin-antitoxin complex, and Peptidyl-serine acetylation
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5415_Toxin-antitoxin_complex,_and_Peptidyl-serine_acetylation


id: CL:5426
description: Mixed, incl. Outer membrane protein beta-barrel domain, and Beta-lactamase
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5426_Mixed,_incl._Outer_membrane_protein_beta-barrel_domain,_and_Beta-lactamase


id: CL:5440
description: Mixed, incl. DNA integration, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5440_Mixed,_incl._DNA_integration,_and_Transposase_activity


id: CL:5441
description: Mixed, incl. DNA integration, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5441_Mixed,_incl._DNA_integration,_and_Transposase_activity


id: CL:5442
description: Mixed, incl. Nucleoplasm, and Homeobox-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5442_Mixed,_incl._Nucleoplasm,_and_Homeobox-like_domain_superfamily


id: CL:5443
description: Mixed, incl. Nucleoplasm, and Homeodomain-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5443_Mixed,_incl._Nucleoplasm,_and_Homeodomain-like_domain


id: CL:5445
description: Mixed, incl. Nucleoplasm, and Integrase, catalytic core
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5445_Mixed,_incl._Nucleoplasm,_and_Integrase,_catalytic_core


id: CL:5466
description: Mixed, incl. HTH domain, and Transposase, IS4-like
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5466_Mixed,_incl._HTH_domain,_and_Transposase,_IS4-like


id: CL:5481
description: Mixed, incl. DDE transposase sub-family, and Transposase, IS4-like
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5481_Mixed,_incl._DDE_transposase_sub-family,_and_Transposase,_IS4-like


id: CL:5492
description: Mixed, incl. GIY-YIG type nucleases (URI domain), and Dimeric alpha-beta barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5492_Mixed,_incl._GIY-YIG_type_nucleases_(URI_domain),_and_Dimeric_alpha-beta_barrel


id: CL:5505
description: Mixed, incl. Transposition, and Integrase, catalytic core
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5505_Mixed,_incl._Transposition,_and_Integrase,_catalytic_core


id: CL:5506
description: Mixed, incl. Integrase, catalytic core, and Transposition
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5506_Mixed,_incl._Integrase,_catalytic_core,_and_Transposition


id: CL:5507
description: Mixed, incl. Integrase, catalytic core, and Transposase IS3/IS911family
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5507_Mixed,_incl._Integrase,_catalytic_core,_and_Transposase_IS3/IS911family


id: CL:5527
description: Mixed, incl. 4Fe-4S single cluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5527_Mixed,_incl._4Fe-4S_single_cluster_domain


id: CL:5537
description: Mixed, incl. Haloacid dehalogenase-like hydrolase, and Phytanoyl-CoA dioxygenase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5537_Mixed,_incl._Haloacid_dehalogenase-like_hydrolase,_and_Phytanoyl-CoA_dioxygenase-like


id: CL:5564
description: Methionine transport, and Amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:5564_Methionine_transport,_and_Amino_acid_transport


id: CL:560
description: Catalytic activity, acting on DNA, and Regulation of DNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:560_Catalytic_activity,_acting_on_DNA,_and_Regulation_of_DNA_metabolic_process


id: CL:561
description: Catalytic activity, acting on DNA, and Regulation of DNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:561_Catalytic_activity,_acting_on_DNA,_and_Regulation_of_DNA_metabolic_process


id: CL:563
description: Mismatch repair, and Nucleotide excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:563_Mismatch_repair,_and_Nucleotide_excision_repair


id: CL:564
description: Nucleotide excision repair, and DNA damage sensor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:564_Nucleotide_excision_repair,_and_DNA_damage_sensor_activity


id: CL:565
description: Nucleotide excision repair, and Mismatch repair
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:565_Nucleotide_excision_repair,_and_Mismatch_repair


id: CL:567
description: Mixed, incl. Nucleotide excision repair, and Mismatched DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:567_Mixed,_incl._Nucleotide_excision_repair,_and_Mismatched_DNA_binding


id: CL:569
description: DNA-directed DNA polymerase, and Helicase superfamily c-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:569_DNA-directed_DNA_polymerase,_and_Helicase_superfamily_c-terminal_domain


id: CL:601
description: DNA recombination and repair protein RecA-like, ATP-binding domain, and UmuC domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:601_DNA_recombination_and_repair_protein_RecA-like,_ATP-binding_domain,_and_UmuC_domain


id: CL:613
description: DNA polymerase complex, and Primosome
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:613_DNA_polymerase_complex,_and_Primosome


id: CL:634
description: Mixed, incl. Regulation of DNA replication, and Holliday junction resolvase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:634_Mixed,_incl._Regulation_of_DNA_replication,_and_Holliday_junction_resolvase_complex


id: CL:647
description: DNA topoisomerase, type IIA-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:647_DNA_topoisomerase,_type_IIA-like_domain_superfamily


id: CL:673
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and Ribokinase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:673_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_Ribokinase-like


id: CL:675
description: Mixed, incl. Regulation of catabolic process, and Glutathione S-transferase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:675_Mixed,_incl._Regulation_of_catabolic_process,_and_Glutathione_S-transferase,_C-terminal


id: CL:698
description: Mixed, incl. Horizontal gene transfer, and NusB family
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:698_Mixed,_incl._Horizontal_gene_transfer,_and_NusB_family


id: CL:700
description: Mixed, incl. NusB family, and Formyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:700_Mixed,_incl._NusB_family,_and_Formyl_transferase


id: CL:729
description: Mixed, incl. Band 7 domain, and NfeD-like, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:729_Mixed,_incl._Band_7_domain,_and_NfeD-like,_C-terminal_domain


id: CL:732
description: Band 7 domain, and NfeD-like, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:732_Band_7_domain,_and_NfeD-like,_C-terminal_domain


id: CL:752
description: Polyprenyl synthetase, and Exodeoxyribonuclease VII complex
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:752_Polyprenyl_synthetase,_and_Exodeoxyribonuclease_VII_complex


id: CL:763
description: Mixed, incl. Queuosine metabolic process, and rRNA methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:763_Mixed,_incl._Queuosine_metabolic_process,_and_rRNA_methylation


id: CL:764
description: Queuosine metabolic process, and Nickel
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:764_Queuosine_metabolic_process,_and_Nickel


id: CL:780
description: Mixed, incl. Nickel, and 3-5-exoribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:780_Mixed,_incl._Nickel,_and_3-5-exoribonuclease_activity


id: CL:790
description: rRNA (cytosine) methyltransferase activity, and Alpha/beta knot methyltransferases
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:790_rRNA_(cytosine)_methyltransferase_activity,_and_Alpha/beta_knot_methyltransferases


id: CL:806
description: Histone-like DNA-binding protein, and Basal transcription factors
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:806_Histone-like_DNA-binding_protein,_and_Basal_transcription_factors


id: CL:810
description: Histone-like DNA-binding protein, and Linoleic acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:810_Histone-like_DNA-binding_protein,_and_Linoleic_acid_metabolism


id: CL:825
description: Mixed, incl. Import across plasma membrane, and Sulfite exporter TauE/SafE
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:825_Mixed,_incl._Import_across_plasma_membrane,_and_Sulfite_exporter_TauE/SafE


id: CL:838
description: Cellular amino acid metabolic process, and Heterocycle biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:838_Cellular_amino_acid_metabolic_process,_and_Heterocycle_biosynthetic_process


id: CL:839
description: Mixed, incl. Cellular amino acid metabolic process, and Nucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:839_Mixed,_incl._Cellular_amino_acid_metabolic_process,_and_Nucleoside_monophosphate_metabolic_process


id: CL:840
description: Mixed, incl. Cellular amino acid metabolic process, and Nucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:840_Mixed,_incl._Cellular_amino_acid_metabolic_process,_and_Nucleoside_monophosphate_metabolic_process


id: CL:842
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:842_Mixed,_incl._Cellular_amino_acid_biosynthetic_process,_and_Nucleoside_monophosphate_metabolic_process

description:
  Mixed, incl. Cellular amino acid biosynthetic process, and Nucleoside monophosphate metabolic process


id: CL:843
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:843_Mixed,_incl._Cellular_amino_acid_biosynthetic_process,_and_Nucleoside_monophosphate_metabolic_process

description:
  Mixed, incl. Cellular amino acid biosynthetic process, and Nucleoside monophosphate metabolic process


id: CL:844
description: Mixed, incl. Amino-acid biosynthesis, and Ribonucleoside monophosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:844_Mixed,_incl._Amino-acid_biosynthesis,_and_Ribonucleoside_monophosphate_biosynthetic_process


id: CL:845
description: Mixed, incl. Amino-acid biosynthesis, and Purine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:845_Mixed,_incl._Amino-acid_biosynthesis,_and_Purine_biosynthesis


id: CL:846
description: Ribonucleoside monophosphate biosynthetic process, and Alpha-amino acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:846_Ribonucleoside_monophosphate_biosynthetic_process,_and_Alpha-amino_acid_biosynthetic_process


id: CL:847
description: Purine biosynthesis, and Pyrimidine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:847_Purine_biosynthesis,_and_Pyrimidine_biosynthesis


id: CL:848
description: Purine biosynthesis, and Pyrimidine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:848_Purine_biosynthesis,_and_Pyrimidine_biosynthesis


id: CL:896
description: Glycine catabolic process, and Tetrahydrofolate interconversion
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:896_Glycine_catabolic_process,_and_Tetrahydrofolate_interconversion


id: CL:910
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:910_Mixed,_incl._Diaminopimelate_metabolic_process,_and_Glutamine_family_amino_acid_biosynthetic_process

description:
  Mixed, incl. Diaminopimelate metabolic process, and Glutamine family amino acid biosynthetic process


id: CL:912
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:912_Glutamine_family_amino_acid_biosynthetic_process,_and_Glutamate/Leucine/Phenylalanine/Valine_dehydrogenase

description:
  Glutamine family amino acid biosynthetic process, and Glutamate/Leucine/Phenylalanine/Valine dehydrogenase


id: CL:914
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:914_Mixed,_incl._Glutamate/Leucine/Phenylalanine/Valine_dehydrogenase,_and_DegT/DnrJ/EryC1/StrS_aminotransferase_family

description:
  Mixed, incl. Glutamate/Leucine/Phenylalanine/Valine dehydrogenase, and DegT/DnrJ/EryC1/StrS aminotransferase family


id: CL:959
description: Phenylalanine, tyrosine and tryptophan biosynthesis, and Histidine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:959_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis,_and_Histidine_biosynthesis


id: CL:977
description: Tryptophan biosynthesis, and ADC synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:977_Tryptophan_biosynthesis,_and_ADC_synthase


id: CL:993
description: Histidine biosynthesis, and Pyridoxine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_452_STRINGid_CL:993_Histidine_biosynthesis,_and_Pyridoxine_biosynthesis


id: GO:0000701
description: Purine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0000701
golevel: 7
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0000701_Purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 10
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0000820
description: Regulation of glutamine family amino acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0000820
golevel: 9
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0000820_Regulation_of_glutamine_family_amino_acid_metabolic_process


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003882
description: CDP-diacylglycerol-serine O-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003882
golevel: 6
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0003882_CDP-diacylglycerol-serine_O-phosphatidyltransferase_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 6
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0004015
description: adenosylmethionine-8-amino-7-oxononanoate transaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004015
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0004015_adenosylmethionine-8-amino-7-oxononanoate_transaminase_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004316
description: 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004316
golevel: 6
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0004316_3-oxoacyl-[acyl-carrier-protein]_reductase_(NADPH)_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
golevel: 6
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004365
description: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004365
golevel: 6
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0004365_glyceraldehyde-3-phosphate_dehydrogenase_(NAD+)_(phosphorylating)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004491
description: Methylmalonate-semialdehyde dehydrogenase (acylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004491
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0004491_Methylmalonate-semialdehyde_dehydrogenase_(acylating)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004591
description: Oxoglutarate dehydrogenase (succinyl-transferring) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004591
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0004591_Oxoglutarate_dehydrogenase_(succinyl-transferring)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004648
description: O-phospho-L-serine:2-oxoglutarate aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004648
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0004648_O-phospho-L-serine:2-oxoglutarate_aminotransferase_activity


id: GO:0004719
description: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004719
golevel: 8
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0004719_protein-L-isoaspartate_(D-aspartate)_O-methyltransferase_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0004808
description: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004808
golevel: 7
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0004808_tRNA_(5-methylaminomethyl-2-thiouridylate)-methyltransferase_activity


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 11
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0006616
description: SRP-dependent cotranslational protein targeting to membrane, translocation
memo: https://amigo.geneontology.org/amigo/term/GO:0006616
golevel: 12
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0006616_SRP-dependent_cotranslational_protein_targeting_to_membrane,_translocation


id: GO:0008271
description: Secondary active sulfate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008271
golevel: 6
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0008271_Secondary_active_sulfate_transmembrane_transporter_activity


id: GO:0008425
description: 2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008425
golevel: 7
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0008425_2-polyprenyl-6-methoxy-1,4-benzoquinone_methyltransferase_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 7
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008657
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008657
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0008657_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_inhibitor_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008666
description: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008666
golevel: 7
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0008666_2,3,4,5-tetrahydropyridine-2,6-dicarboxylate_N-succinyltransferase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
golevel: 6
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008713
description: ADP-heptose-lipopolysaccharide heptosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008713
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0008713_ADP-heptose-lipopolysaccharide_heptosyltransferase_activity


id: GO:0008759
description: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008759
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0008759_UDP-3-O-[3-hydroxymyristoyl]_N-acetylglucosamine_deacetylase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008780
description: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008780
golevel: 6
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0008780_acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine_O-acyltransferase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0008982
description: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008982
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0008982_protein-N(PI)-phosphohistidine-sugar_phosphotransferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 6
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 9
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 10
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 9
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 10
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009196
description: Pyrimidine deoxyribonucleoside diphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009196
golevel: 9
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0009196_Pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process


id: GO:0009197
description: Pyrimidine deoxyribonucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009197
golevel: 10
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0009197_Pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 10
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 9
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 10
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 10
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009330
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009330
golevel: 3
name:
  GOCC.STRING_v12.0_452_STRINGid_GO:0009330_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_complex


id: GO:0009401
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system
memo: https://amigo.geneontology.org/amigo/term/GO:0009401
golevel: 8
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0009401_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 6
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010420
description: 3,4-dihydroxy-5-polyprenylbenzoic acid O-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0010420
golevel: 6
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0010420_3,4-dihydroxy-5-polyprenylbenzoic_acid_O-methyltransferase_activity


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
golevel: 3
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015658
description: Branched-chain amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015658
golevel: 6
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0015658_Branched-chain_amino_acid_transmembrane_transporter_activity


id: GO:0015932
description: Nucleobase-containing compound transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015932
golevel: 3
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0015932_Nucleobase-containing_compound_transmembrane_transporter_activity


id: GO:0015988
description: Energy coupled proton transmembrane transport, against electrochemical gradient
memo: https://amigo.geneontology.org/amigo/term/GO:0015988
golevel: 8
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0015988_Energy_coupled_proton_transmembrane_transport,_against_electrochemical_gradient


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016624
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016624
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016624_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_disulfide_as_acceptor


id: GO:0016625
memo: https://amigo.geneontology.org/amigo/term/GO:0016625
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016625_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_iron-sulfur_protein_as_acceptor

description:
  Oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016641
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016641
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016641_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_oxygen_as_acceptor


id: GO:0016642
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016642
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016642_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_disulfide_as_acceptor


id: GO:0016643
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016643
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016643_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_iron-sulfur_protein_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016649
memo: https://amigo.geneontology.org/amigo/term/GO:0016649
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016649_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor


id: GO:0016652
description: Oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016652
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016652_Oxidoreductase_activity,_acting_on_NAD(P)H,_NAD(P)_as_acceptor


id: GO:0016653
description: Oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016653
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016653_Oxidoreductase_activity,_acting_on_NAD(P)H,_heme_protein_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016657
description: Oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016657
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016657_Oxidoreductase_activity,_acting_on_NAD(P)H,_nitrogenous_group_as_acceptor


id: GO:0016661
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016661
golevel: 3
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016661_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016671
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016671
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016671_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: GO:0016679
description: Oxidoreductase activity, acting on diphenols and related substances as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016679
golevel: 3
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016679_Oxidoreductase_activity,_acting_on_diphenols_and_related_substances_as_donors


id: GO:0016682
description: Oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016682
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016682_Oxidoreductase_activity,_acting_on_diphenols_and_related_substances_as_donors,_oxygen_as_acceptor


id: GO:0016699
description: Oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016699
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016699_Oxidoreductase_activity,_acting_on_hydrogen_as_donor,_iron-sulfur_protein_as_acceptor


id: GO:0016701
description: Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
memo: https://amigo.geneontology.org/amigo/term/GO:0016701
golevel: 3
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016701_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen


id: GO:0016702
memo: https://amigo.geneontology.org/amigo/term/GO:0016702
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016702_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_two_atoms_of_oxygen

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen


id: GO:0016703
memo: https://amigo.geneontology.org/amigo/term/GO:0016703
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016703_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_one_atom_of_oxygen_(internal_monooxygenases_or_internal_mixed_function_oxidases)

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)


id: GO:0016705
memo: https://amigo.geneontology.org/amigo/term/GO:0016705
golevel: 3
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016705_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: GO:0016709
memo: https://amigo.geneontology.org/amigo/term/GO:0016709
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016709_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen


id: GO:0016713
memo: https://amigo.geneontology.org/amigo/term/GO:0016713
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016713_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_reduced_iron-sulfur_protein_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen


id: GO:0016714
memo: https://amigo.geneontology.org/amigo/term/GO:0016714
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016714_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_reduced_pteridine_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen


id: GO:0016717
memo: https://amigo.geneontology.org/amigo/term/GO:0016717
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016717_Oxidoreductase_activity,_acting_on_paired_donors,_with_oxidation_of_a_pair_of_donors_resulting_in_the_reduction_of_molecular_oxygen_to_two_molecules_of_water

description:
  Oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water


id: GO:0016721
description: Oxidoreductase activity, acting on superoxide radicals as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016721
golevel: 3
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016721_Oxidoreductase_activity,_acting_on_superoxide_radicals_as_acceptor


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016730
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016730
golevel: 3
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016730_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors


id: GO:0016731
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016731
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016731_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_NAD_or_NADP_as_acceptor


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
golevel: 6
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016823
description: Hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances
memo: https://amigo.geneontology.org/amigo/term/GO:0016823
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016823_Hydrolase_activity,_acting_on_acid_carbon-carbon_bonds,_in_ketonic_substances


id: GO:0016825
description: Hydrolase activity, acting on acid phosphorus-nitrogen bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016825
golevel: 3
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016825_Hydrolase_activity,_acting_on_acid_phosphorus-nitrogen_bonds


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016856
description: Racemase and epimerase activity, acting on hydroxy acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016856
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016856_Racemase_and_epimerase_activity,_acting_on_hydroxy_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016863
description: Intramolecular oxidoreductase activity, transposing C=C bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016863
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016863_Intramolecular_oxidoreductase_activity,_transposing_C=C_bonds


id: GO:0016869
description: Intramolecular transferase activity, transferring amino groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016869
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016869_Intramolecular_transferase_activity,_transferring_amino_groups


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016888
description: Endodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016888
golevel: 7
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016888_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016889
description: Endodeoxyribonuclease activity, producing 3-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016889
golevel: 7
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016889_Endodeoxyribonuclease_activity,_producing_3-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
golevel: 6
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016894
memo: https://amigo.geneontology.org/amigo/term/GO:0016894
golevel: 6
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016894_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_3-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3-phosphomonoesters


id: GO:0016895
description: Exodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016895
golevel: 7
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016895_Exodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016901
memo: https://amigo.geneontology.org/amigo/term/GO:0016901
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016901_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor


id: GO:0016903
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016903
golevel: 3
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0016903_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors


id: GO:0018339
description: peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid
memo: https://amigo.geneontology.org/amigo/term/GO:0018339
golevel: 8
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0018339_peptidyl-L-beta-methylthioaspartic_acid_biosynthetic_process_from_peptidyl-aspartic_acid


id: GO:0018478
description: Malonate-semialdehyde dehydrogenase (acetylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0018478
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0018478_Malonate-semialdehyde_dehydrogenase_(acetylating)_activity


id: GO:0019219
description: Regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019219
golevel: 5
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0019219_Regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0019243
description: Methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
memo: https://amigo.geneontology.org/amigo/term/GO:0019243
golevel: 9
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0019243_Methylglyoxal_catabolic_process_to_D-lactate_via_S-lactoyl-glutathione


id: GO:0019287
description: Isopentenyl diphosphate biosynthetic process, mevalonate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0019287
golevel: 12
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0019287_Isopentenyl_diphosphate_biosynthetic_process,_mevalonate_pathway


id: GO:0019293
description: Tyrosine biosynthetic process, by oxidation of phenylalanine
memo: https://amigo.geneontology.org/amigo/term/GO:0019293
golevel: 11
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0019293_Tyrosine_biosynthetic_process,_by_oxidation_of_phenylalanine


id: GO:0019294
description: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019294
golevel: 8
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0019294_keto-3-deoxy-D-manno-octulosonic_acid_biosynthetic_process


id: GO:0030613
description: Oxidoreductase activity, acting on phosphorus or arsenic in donors
memo: https://amigo.geneontology.org/amigo/term/GO:0030613
golevel: 3
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0030613_Oxidoreductase_activity,_acting_on_phosphorus_or_arsenic_in_donors


id: GO:0030614
description: Oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0030614
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0030614_Oxidoreductase_activity,_acting_on_phosphorus_or_arsenic_in_donors,_disulfide_as_acceptor


id: GO:0031234
description: Extrinsic component of cytoplasmic side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031234
golevel: 6
name:
  GOCC.STRING_v12.0_452_STRINGid_GO:0031234_Extrinsic_component_of_cytoplasmic_side_of_plasma_membrane


id: GO:0031235
description: Intrinsic component of the cytoplasmic side of the plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031235
name:
  GOCC.STRING_v12.0_452_STRINGid_GO:0031235_Intrinsic_component_of_the_cytoplasmic_side_of_the_plasma_membrane


id: GO:0031246
description: Intrinsic component of periplasmic side of cell outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031246
name:
  GOCC.STRING_v12.0_452_STRINGid_GO:0031246_Intrinsic_component_of_periplasmic_side_of_cell_outer_membrane


id: GO:0032297
description: Negative regulation of DNA-templated DNA replication initiation
memo: https://amigo.geneontology.org/amigo/term/GO:0032297
golevel: 11
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0032297_Negative_regulation_of_DNA-templated_DNA_replication_initiation


id: GO:0032414
description: Positive regulation of ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0032414
golevel: 8
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0032414_Positive_regulation_of_ion_transmembrane_transporter_activity


id: GO:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
golevel: 3
name:
  GOCC.STRING_v12.0_452_STRINGid_GO:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GO:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
golevel: 3
name:
  GOCC.STRING_v12.0_452_STRINGid_GO:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GO:0033283
description: ATPase-coupled organic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033283
golevel: 6
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0033283_ATPase-coupled_organic_acid_transmembrane_transporter_activity


id: GO:0033284
description: ATPase-coupled carboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033284
golevel: 7
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0033284_ATPase-coupled_carboxylic_acid_transmembrane_transporter_activity


id: GO:0033467
description: CMP-keto-3-deoxy-D-manno-octulosonic acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033467
golevel: 7
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0033467_CMP-keto-3-deoxy-D-manno-octulosonic_acid_metabolic_process


id: GO:0033468
description: CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033468
golevel: 8
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0033468_CMP-keto-3-deoxy-D-manno-octulosonic_acid_biosynthetic_process


id: GO:0033744
description: L-methionine:thioredoxin-disulfide S-oxidoreductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033744
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0033744_L-methionine:thioredoxin-disulfide_S-oxidoreductase_activity


id: GO:0034028
description: 5-(carboxyamino)imidazole ribonucleotide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034028
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0034028_5-(carboxyamino)imidazole_ribonucleotide_synthase_activity


id: GO:0035592
description: Establishment of protein localization to extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0035592
golevel: 6
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0035592_Establishment_of_protein_localization_to_extracellular_region


id: GO:0036107
description: 4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0036107
golevel: 7
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0036107_4-amino-4-deoxy-alpha-L-arabinopyranosyl_undecaprenyl_phosphate_metabolic_process


id: GO:0036108
description: 4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0036108
golevel: 8
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0036108_4-amino-4-deoxy-alpha-L-arabinopyranosyl_undecaprenyl_phosphate_biosynthetic_process


id: GO:0042083
description: 5,10-methylenetetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042083
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0042083_5,10-methylenetetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042173
description: Regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042173
golevel: 6
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0042173_Regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0043333
description: 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043333
golevel: 8
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0043333_2-octaprenyl-6-methoxy-1,4-benzoquinone_methylase_activity


id: GO:0043433
description: Negative regulation of DNA-binding transcription factor activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043433
golevel: 12
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0043433_Negative_regulation_of_DNA-binding_transcription_factor_activity


id: GO:0043467
description: Regulation of generation of precursor metabolites and energy
memo: https://amigo.geneontology.org/amigo/term/GO:0043467
golevel: 5
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0043467_Regulation_of_generation_of_precursor_metabolites_and_energy


id: GO:0043709
description: Cell adhesion involved in single-species biofilm formation
memo: https://amigo.geneontology.org/amigo/term/GO:0043709
golevel: 7
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0043709_Cell_adhesion_involved_in_single-species_biofilm_formation


id: GO:0043772
description: Acyl-phosphate glycerol-3-phosphate acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043772
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0043772_Acyl-phosphate_glycerol-3-phosphate_acyltransferase_activity


id: GO:0043811
description: Phosphate:acyl-[acyl carrier protein] acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043811
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0043811_Phosphate:acyl-[acyl_carrier_protein]_acyltransferase_activity


id: GO:0043891
description: glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043891
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0043891_glyceraldehyde-3-phosphate_dehydrogenase_(NAD(P)+)_(phosphorylating)_activity


id: GO:0044419
description: Biological process involved in interspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0044419
golevel: 1
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0044419_Biological_process_involved_in_interspecies_interaction_between_organisms


id: GO:0044769
description: ATPase activity, coupled to transmembrane movement of ions, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0044769
golevel: 7
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0044769_ATPase_activity,_coupled_to_transmembrane_movement_of_ions,_rotational_mechanism


id: GO:0045261
description: Proton-transporting ATP synthase complex, catalytic core F(1)
memo: https://amigo.geneontology.org/amigo/term/GO:0045261
golevel: 6
name:
  GOCC.STRING_v12.0_452_STRINGid_GO:0045261_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: GO:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
golevel: 6
name:
  GOCC.STRING_v12.0_452_STRINGid_GO:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GO:0045881
description: Positive regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0045881
golevel: 7
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0045881_Positive_regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0045934
description: Negative regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045934
golevel: 6
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0045934_Negative_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0045935
description: Positive regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045935
golevel: 6
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0045935_Positive_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0046537
description: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046537
golevel: 6
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0046537_2,3-bisphosphoglycerate-independent_phosphoglycerate_mutase_activity


id: GO:0046857
memo: https://amigo.geneontology.org/amigo/term/GO:0046857
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0046857_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors,_with_NAD_or_NADP_as_acceptor

description:
  Oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor


id: GO:0046912
description: Acyltransferase activity, acyl groups converted into alkyl on transfer
memo: https://amigo.geneontology.org/amigo/term/GO:0046912
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0046912_Acyltransferase_activity,_acyl_groups_converted_into_alkyl_on_transfer


id: GO:0046933
description: Proton-transporting ATP synthase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046933
golevel: 8
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0046933_Proton-transporting_ATP_synthase_activity,_rotational_mechanism


id: GO:0047451
description: 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047451
golevel: 6
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0047451_3-hydroxyoctanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0047480
description: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047480
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0047480_UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine_ligase_activity


id: GO:0050511
description: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050511
golevel: 6
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0050511_Undecaprenyldiphospho-muramoylpentapeptide_beta-N-acetylglucosaminyltransferase_activity


id: GO:0050566
description: asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050566
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0050566_asparaginyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0051003
description: Ligase activity, forming nitrogen-metal bonds, forming coordination complexes
memo: https://amigo.geneontology.org/amigo/term/GO:0051003
golevel: 4
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0051003_Ligase_activity,_forming_nitrogen-metal_bonds,_forming_coordination_complexes


id: GO:0051075
description: S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051075
golevel: 3
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0051075_S-adenosylmethionine:tRNA_ribosyltransferase-isomerase_activity


id: GO:0051172
description: Negative regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051172
golevel: 5
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0051172_Negative_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051173
description: Positive regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051173
golevel: 5
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0051173_Positive_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051703
description: Biological process involved in intraspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0051703
golevel: 1
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0051703_Biological_process_involved_in_intraspecies_interaction_between_organisms


id: GO:0051712
description: Positive regulation of killing of cells of another organism
memo: https://amigo.geneontology.org/amigo/term/GO:0051712
golevel: 7
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0051712_Positive_regulation_of_killing_of_cells_of_another_organism


id: GO:0051748
description: UTP-monosaccharide-1-phosphate uridylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051748
golevel: 6
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0051748_UTP-monosaccharide-1-phosphate_uridylyltransferase_activity


id: GO:0051991
memo: https://amigo.geneontology.org/amigo/term/GO:0051991
golevel: 6
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0051991_UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol_4-beta-N-acetylglucosaminlytransferase_activity

description:
  UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity


id: GO:0051992
memo: https://amigo.geneontology.org/amigo/term/GO:0051992
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0051992_UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate_transferase_activity

description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity


id: GO:0052042
description: Positive regulation by symbiont of host programmed cell death
memo: https://amigo.geneontology.org/amigo/term/GO:0052042
golevel: 8
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0052042_Positive_regulation_by_symbiont_of_host_programmed_cell_death


id: GO:0052590
description: sn-glycerol-3-phosphate:ubiquinone oxidoreductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052590
golevel: 6
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0052590_sn-glycerol-3-phosphate:ubiquinone_oxidoreductase_activity


id: GO:0052591
description: sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052591
golevel: 7
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0052591_sn-glycerol-3-phosphate:ubiquinone-8_oxidoreductase_activity


id: GO:0052908
description: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052908
golevel: 9
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0052908_16S_rRNA_(adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase_activity


id: GO:0055052
description: ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing
memo: https://amigo.geneontology.org/amigo/term/GO:0055052
golevel: 7
name:
  GOCC.STRING_v12.0_452_STRINGid_GO:0055052_ATP-binding_cassette_(ABC)_transporter_complex,_substrate-binding_subunit-containing


id: GO:0061695
description: Transferase complex, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0061695
golevel: 4
name:
  GOCC.STRING_v12.0_452_STRINGid_GO:0061695_Transferase_complex,_transferring_phosphorus-containing_groups


id: GO:0061928
description: Glutathione specific gamma-glutamylcyclotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0061928
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0061928_Glutathione_specific_gamma-glutamylcyclotransferase_activity


id: GO:0070290
description: N-acylphosphatidylethanolamine-specific phospholipase D activity
memo: https://amigo.geneontology.org/amigo/term/GO:0070290
golevel: 6
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0070290_N-acylphosphatidylethanolamine-specific_phospholipase_D_activity


id: GO:0070626
memo: https://amigo.geneontology.org/amigo/term/GO:0070626
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0070626_(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)_succinate_lyase_(fumarate-forming)_activity

description:
  (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity


id: GO:0070647
description: Protein modification by small protein conjugation or removal
memo: https://amigo.geneontology.org/amigo/term/GO:0070647
golevel: 6
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0070647_Protein_modification_by_small_protein_conjugation_or_removal


id: GO:0072586
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) regulator activity
memo: https://amigo.geneontology.org/amigo/term/GO:0072586
golevel: 3
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0072586_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_regulator_activity


id: GO:0072599
description: Establishment of protein localization to endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0072599
golevel: 7
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0072599_Establishment_of_protein_localization_to_endoplasmic_reticulum


id: GO:0097588
description: Archaeal or bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:0097588
golevel: 4
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0097588_Archaeal_or_bacterial-type_flagellum-dependent_cell_motility


id: GO:0102027
description: S-adenosylmethionine:2-demethylquinol-8 methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102027
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0102027_S-adenosylmethionine:2-demethylquinol-8_methyltransferase_activity


id: GO:0102094
description: S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102094
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0102094_S-adenosylmethionine:2-demethylmenaquinol_methyltransferase_activity


id: GO:0102552
description: Lipoyl synthase activity (acting on glycine-cleavage complex H protein
memo: https://amigo.geneontology.org/amigo/term/GO:0102552
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0102552_Lipoyl_synthase_activity_(acting_on_glycine-cleavage_complex_H_protein


id: GO:0102553
description: Lipoyl synthase activity (acting on pyruvate dehydrogenase E2 protein)
memo: https://amigo.geneontology.org/amigo/term/GO:0102553
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0102553_Lipoyl_synthase_activity_(acting_on_pyruvate_dehydrogenase_E2_protein)


id: GO:0102955
description: S-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102955
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0102955_S-adenosylmethionine:2-demethylmenaquinol-7_methyltransferase_activity


id: GO:0106074
description: aminoacyl-tRNA metabolism involved in translational fidelity
memo: https://amigo.geneontology.org/amigo/term/GO:0106074
golevel: 9
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:0106074_aminoacyl-tRNA_metabolism_involved_in_translational_fidelity


id: GO:0106418
description: UDP-N-acetylmuramate-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptanedioate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0106418
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0106418_UDP-N-acetylmuramate-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptanedioate_ligase_activity


id: GO:0140078
description: Class I DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0140078
golevel: 5
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:0140078_Class_I_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:1900377
description: Negative regulation of secondary metabolite biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:1900377
golevel: 6
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:1900377_Negative_regulation_of_secondary_metabolite_biosynthetic_process


id: GO:1901505
description: Carbohydrate derivative transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:1901505
golevel: 3
name:
  GOMF.STRING_v12.0_452_STRINGid_GO:1901505_Carbohydrate_derivative_transmembrane_transporter_activity


id: GO:1901800
description: Positive regulation of proteasomal protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1901800
golevel: 9
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:1901800_Positive_regulation_of_proteasomal_protein_catabolic_process


id: GO:1902021
description: Regulation of bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:1902021
golevel: 6
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:1902021_Regulation_of_bacterial-type_flagellum-dependent_cell_motility


id: GO:1902201
description: Negative regulation of bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:1902201
golevel: 7
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:1902201_Negative_regulation_of_bacterial-type_flagellum-dependent_cell_motility


id: GO:1902221
description: Erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1902221
golevel: 8
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:1902221_Erythrose_4-phosphate/phosphoenolpyruvate_family_amino_acid_metabolic_process


id: GO:1902222
description: Erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1902222
golevel: 9
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:1902222_Erythrose_4-phosphate/phosphoenolpyruvate_family_amino_acid_catabolic_process


id: GO:1903050
description: Regulation of proteolysis involved in protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1903050
golevel: 7
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:1903050_Regulation_of_proteolysis_involved_in_protein_catabolic_process


id: GO:1903052
description: Positive regulation of proteolysis involved in protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1903052
golevel: 8
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:1903052_Positive_regulation_of_proteolysis_involved_in_protein_catabolic_process


id: GO:1903507
description: Negative regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903507
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:1903507_Negative_regulation_of_nucleic_acid-templated_transcription


id: GO:1903508
description: Positive regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903508
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:1903508_Positive_regulation_of_nucleic_acid-templated_transcription


id: GO:1904950
description: Negative regulation of establishment of protein localization
memo: https://amigo.geneontology.org/amigo/term/GO:1904950
golevel: 7
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:1904950_Negative_regulation_of_establishment_of_protein_localization


id: GO:1990961
description: Xenobiotic detoxification by transmembrane export across the plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:1990961
golevel: 6
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:1990961_Xenobiotic_detoxification_by_transmembrane_export_across_the_plasma_membrane


id: GO:2000113
description: Negative regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000113
name:
  GOBP.STRING_v12.0_452_STRINGid_GO:2000113_Negative_regulation_of_cellular_macromolecule_biosynthetic_process


